Miyakogusa Predicted Gene

Lj0g3v0254089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0254089.1 Non Characterized Hit- tr|D7TGI1|D7TGI1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.43,3e-16,UNCHARACTERIZED,NULL; seg,NULL; SNARE_assoc,SNARE
associated Golgi protein,CUFF.16670.1
         (284 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g101920.1 | SNARE associated family protein | HC | chr4:42...   357   6e-99
Medtr5g011420.1 | SNARE associated family protein | HC | chr5:32...   296   2e-80
Medtr2g028450.1 | SNARE associated family protein | HC | chr2:10...   204   1e-52
Medtr3g064097.1 | SNARE associated family protein | HC | chr3:28...    89   5e-18
Medtr4g032670.1 | SNARE associated family protein | HC | chr4:11...    55   9e-08
Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like prot...    52   6e-07
Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like prot...    52   7e-07

>Medtr4g101920.1 | SNARE associated family protein | HC |
           chr4:42167255-42163145 | 20130731
          Length = 313

 Score =  357 bits (917), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 175/233 (75%), Positives = 193/233 (82%)

Query: 52  LFVGSLAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXXXXXXX 111
           L +G LAV V+KWVGPY IDKEVIPIINWETETFS PVL +L+F SVA+F          
Sbjct: 81  LSLGFLAVAVLKWVGPYLIDKEVIPIINWETETFSPPVLTILLFASVAIFPTILLPSTPS 140

Query: 112 MWVAGMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRSAGGGN 171
           MWVAG+T GYGFGFLLIITAAAIGVSLPF IGS FHHKIEGWLEKYPK+AS+++SAG GN
Sbjct: 141 MWVAGVTLGYGFGFLLIITAAAIGVSLPFIIGSIFHHKIEGWLEKYPKKASILKSAGAGN 200

Query: 172 WVHQFRAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTL 231
           W HQFRAV LIRISPFPY+++NYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILI+TL
Sbjct: 201 WFHQFRAVALIRISPFPYMVFNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIKTL 260

Query: 232 ADASHEKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQSEDDESLLR 284
           ADAS+E++SLSA QIILN LGFC           YAKRRLKELQ ED   LL+
Sbjct: 261 ADASNERQSLSAQQIILNALGFCLTVVTTVIITVYAKRRLKELQEEDKMLLLQ 313


>Medtr5g011420.1 | SNARE associated family protein | HC |
           chr5:3274387-3272739 | 20130731
          Length = 318

 Score =  296 bits (758), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 138/229 (60%), Positives = 168/229 (73%)

Query: 51  ILFVGSLAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXXXXXX 110
           I+ +  L  VVI WVGP+FI K  IP+I W+ +TF+T  L + VF S+ALF         
Sbjct: 85  IICLSILGFVVINWVGPFFIQKVFIPVIIWQRDTFTTSELAIYVFASIALFPTIFLPSSP 144

Query: 111 XMWVAGMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRSAGGG 170
            MWVAGMTFGY FGF L+++AA++GVSLPFF    FHHKIE WL++YPK ASV+RSAGGG
Sbjct: 145 SMWVAGMTFGYFFGFFLVMSAASVGVSLPFFTSKMFHHKIEEWLDQYPKEASVLRSAGGG 204

Query: 171 NWVHQFRAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRT 230
           NW HQFRAV LIR+SPFPY+IYNYCA ATNV+YGPY+ GSL GM+PE+  +IYTGILIR 
Sbjct: 205 NWFHQFRAVALIRVSPFPYMIYNYCATATNVQYGPYLCGSLAGMLPEVIASIYTGILIRA 264

Query: 231 LADASHEKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQSEDD 279
           LA+ SH+   LSAPQI  NV+GFC           YAKRRL EL+ E++
Sbjct: 265 LANVSHKTHGLSAPQIAFNVVGFCIAVATTIFFTIYAKRRLNELRQEEE 313


>Medtr2g028450.1 | SNARE associated family protein | HC |
           chr2:10555701-10558445 | 20130731
          Length = 373

 Score =  204 bits (518), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/226 (42%), Positives = 143/226 (63%), Gaps = 1/226 (0%)

Query: 57  LAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXXXXXXXMWVAG 116
           L+++++KW  P+  +K + P++ WE   F  PVL L++  S+ALF          MW+AG
Sbjct: 110 LSLLLVKWGVPFAFEKVLYPVMEWEATAFGRPVLALVLIASLALFPVLLIPSGPSMWLAG 169

Query: 117 MTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRSAGGGNWVHQF 176
           M FGYG GF++I+    IG+ LP+ IG  F  +I  WLEK+P+ A++IR AG G+W HQF
Sbjct: 170 MIFGYGLGFVIIMVGTTIGMVLPYLIGLKFRDRIHQWLEKWPQNAAMIRLAGEGSWFHQF 229

Query: 177 RAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTLADASH 236
           + V L R SPFPY I+NY  V T++K+ PY  GS+ GMVPE F+ IY+G LI++LADA +
Sbjct: 230 QVVALFRTSPFPYTIFNYAVVVTDMKFWPYFCGSVAGMVPEAFIYIYSGRLIKSLADAQY 289

Query: 237 EKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQ-SEDDES 281
            +  ++  +I+ N++ F            YAKR L +L+ +E +E 
Sbjct: 290 GRHHMTTVEIVYNIISFIIAVITIVGFTVYAKRTLNKLKIAEANEE 335


>Medtr3g064097.1 | SNARE associated family protein | HC |
           chr3:28829690-28829424 | 20130731
          Length = 80

 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 54/80 (67%)

Query: 163 VIRSAGGGNWVHQFRAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAI 222
           +IR AG G+W HQF+ V L R SPFPY I+NY  V T++K+ PY  GS+ GMVPE F+ I
Sbjct: 1   MIRLAGEGSWFHQFQVVALFRTSPFPYTIFNYAVVVTDMKFWPYFCGSVAGMVPEAFIYI 60

Query: 223 YTGILIRTLADASHEKRSLS 242
           Y+ + + +L D+ +  R  S
Sbjct: 61  YSFVFLFSLYDSLNSSRMQS 80


>Medtr4g032670.1 | SNARE associated family protein | HC |
           chr4:11261721-11269691 | 20130731
          Length = 331

 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 6/129 (4%)

Query: 115 AGMTFGYGFGFLLIITAAAIGVSLPFFIGSTF-HHKIEGWLEKYPKRASVIRSAGGGNWV 173
           AG+ FG   G +++  +  +  S+ F I   F   +I   +E   K  ++ ++ G     
Sbjct: 171 AGLLFGSLTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIG----E 226

Query: 174 HQFRAVTLIRISPF-PYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTLA 232
           + F+ VTL+R+SP  P+ + NY    T+VK+ PY++GS +GM+P  +  +  G   R + 
Sbjct: 227 NGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAII 286

Query: 233 DASHEKRSL 241
               E  SL
Sbjct: 287 QEESELSSL 295


>Medtr4g117280.1 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600647-48596094 | 20130731
          Length = 294

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 116 GMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHK-IEGWLEKYPKRASV-IRSAGGGNWV 173
           G  FG   G +     A IG    F +G T     +   L+ YP+  SV I +   G   
Sbjct: 95  GYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQFKSVSIATQRSG--- 151

Query: 174 HQFRAVTLIRISPF-PYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTLA 232
             F+ V L+R+ P  PY I NY    T V    Y + S +GM+P     +Y G  ++ ++
Sbjct: 152 --FKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAGTTLKDIS 209

Query: 233 DASH 236
           D +H
Sbjct: 210 DVTH 213


>Medtr4g117280.2 | TVP38/TMEM64 family membrane slr0305-like protein
           | HC | chr4:48600709-48596099 | 20130731
          Length = 274

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 116 GMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHK-IEGWLEKYPKRASV-IRSAGGGNWV 173
           G  FG   G +     A IG    F +G T     +   L+ YP+  SV I +   G   
Sbjct: 75  GYLFGLPVGIVADSVGATIGAVAAFLLGGTIGKSFVASKLKDYPQFKSVSIATQRSG--- 131

Query: 174 HQFRAVTLIRISPF-PYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTLA 232
             F+ V L+R+ P  PY I NY    T V    Y + S +GM+P     +Y G  ++ ++
Sbjct: 132 --FKIVFLLRLVPLLPYNILNYLLSVTPVPLWEYTLASWLGMMPLTVALVYAGTTLKDIS 189

Query: 233 DASH 236
           D +H
Sbjct: 190 DVTH 193