Miyakogusa Predicted Gene

Lj0g3v0253979.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253979.1 Non Characterized Hit- tr|I3SMJ5|I3SMJ5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.48,0,Cullin_binding,Potentiating neddylation domain; seg,NULL;
DCUN1,Potentiating neddylation domain; SUB,CUFF.16665.1
         (192 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g008540.1 | defective in cullin neddylation protein, putat...   325   2e-89
Medtr4g116980.1 | defective in cullin neddylation protein, putat...   217   6e-57
Medtr2g064415.1 | defective in cullin neddylation protein, putat...    72   3e-13

>Medtr4g008540.1 | defective in cullin neddylation protein, putative
           | HC | chr4:1579261-1574469 | 20130731
          Length = 228

 Score =  325 bits (832), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 157/192 (81%), Positives = 167/192 (86%), Gaps = 4/192 (2%)

Query: 1   MRRSAAKKTGQSNSTPSVNSSAADLFXXXXXXXXXXXXXXIDSLFYSYANGSSSLIDPEG 60
           MRR+A+KKTGQSNS PS    AADLF              IDSLFYSYANGSS LIDPEG
Sbjct: 1   MRRAASKKTGQSNSNPS----AADLFRSASSKANSKELERIDSLFYSYANGSSGLIDPEG 56

Query: 61  IETLCADMEIAHTDVRILMLAWKMKAEEQGYFTLDEWRRGLKALRADTVSKLKKALPDLE 120
           IE LCADME+ HTD+RILMLAWKMK+EEQGYFT+DEWRRGLKALRADTVSKLKKALPDLE
Sbjct: 57  IEALCADMEVDHTDLRILMLAWKMKSEEQGYFTVDEWRRGLKALRADTVSKLKKALPDLE 116

Query: 121 KEVRRPSNFADFYSYAFQYCLTEEKQKSIDTESICELLALVLGSTFPAQVNLFVEYLKAQ 180
           KEVRRPSNF+DFYSYAFQYCLTEEKQKSID ESICELL+LVLGSTFPAQV+LFVEYLK Q
Sbjct: 117 KEVRRPSNFSDFYSYAFQYCLTEEKQKSIDIESICELLSLVLGSTFPAQVSLFVEYLKNQ 176

Query: 181 ADYKVINMDQWM 192
            DYKV+NMDQWM
Sbjct: 177 NDYKVVNMDQWM 188


>Medtr4g116980.1 | defective in cullin neddylation protein, putative
           | HC | chr4:48447801-48452732 | 20130731
          Length = 229

 Score =  217 bits (552), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 98/151 (64%), Positives = 120/151 (79%)

Query: 41  IDSLFYSYANGSSSLIDPEGIETLCADMEIAHTDVRILMLAWKMKAEEQGYFTLDEWRRG 100
           ID+LF +Y N S  +IDP+GIE LC D+ + HTDVR+L+LAWKM AE+QGYFT DEWRRG
Sbjct: 37  IDNLFEAYTNKSLDMIDPDGIEALCKDVNVDHTDVRMLILAWKMNAEKQGYFTKDEWRRG 96

Query: 101 LKALRADTVSKLKKALPDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDTESICELLAL 160
           LK L ADT+ KLKKA+  L+KEV  P +F DFYSYAF+YCLTE+KQ+SID E+ICEL  +
Sbjct: 97  LKCLGADTLPKLKKAMNGLKKEVMVPESFEDFYSYAFKYCLTEDKQRSIDIETICELCTI 156

Query: 161 VLGSTFPAQVNLFVEYLKAQADYKVINMDQW 191
           VLGS FP+QVNL  EYLK Q +Y+ + MD W
Sbjct: 157 VLGSEFPSQVNLLTEYLKIQNEYRALTMDHW 187


>Medtr2g064415.1 | defective in cullin neddylation protein, putative
           | HC | chr2:27316373-27324416 | 20130731
          Length = 259

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 82/151 (54%), Gaps = 2/151 (1%)

Query: 41  IDSLFYSYANGSSSLIDPEGIETLCADMEIAHTDVRILMLAWKMKAEEQGYFTLDEWRRG 100
           ++ L+  Y +    +I  +GI  LC D+++   D+ +L+L+W MKA     F+  E+  G
Sbjct: 59  LEELYNRYKDKYIDMIYADGITLLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFTEG 118

Query: 101 LKALRADTVSKLKKALPDLEKEVRRPSNFADFYSYAFQYCLTEEKQKSIDTESICELLAL 160
           L++L  D++ K ++ +P +  E++    F + Y++AF +   E+ QKS+  ++   +  L
Sbjct: 119 LQSLGIDSLEKFREKIPYMRSELKDEQKFREIYNFAFGWA-KEKGQKSLALDTAIGMWQL 177

Query: 161 VLGSTFPAQVNLFVEYLKAQADYKVINMDQW 191
           +        V  + ++L+A+ + K I+ D W
Sbjct: 178 LFAEKQWPLVEHWCQFLQARHN-KAISRDTW 207