Miyakogusa Predicted Gene

Lj0g3v0253489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253489.1 Non Characterized Hit- tr|I1P4A2|I1P4A2_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,39.23,1e-16,seg,NULL; AAA-FAMILY ATPASE,NULL; AAA
ATPASE,NULL,CUFF.16634.1
         (172 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g074920.1 | P-loop nucleoside triphosphate hydrolase super...   120   6e-28
Medtr1g088750.1 | P-loop nucleoside triphosphate hydrolase super...    75   4e-14
Medtr1g088750.2 | P-loop nucleoside triphosphate hydrolase super...    75   4e-14
Medtr1g088730.1 | P-loop nucleoside triphosphate hydrolase super...    70   1e-12
Medtr3g089100.2 | P-loop nucleoside triphosphate hydrolase super...    64   6e-11
Medtr3g089100.1 | P-loop nucleoside triphosphate hydrolase super...    64   6e-11
Medtr3g089100.3 | P-loop nucleoside triphosphate hydrolase super...    64   6e-11
Medtr8g099065.1 | P-loop nucleoside triphosphate hydrolase super...    59   3e-09
Medtr8g099065.2 | P-loop nucleoside triphosphate hydrolase super...    58   4e-09
Medtr5g009840.1 | P-loop nucleoside triphosphate hydrolase super...    58   5e-09
Medtr6g033740.1 | P-loop nucleoside triphosphate hydrolase super...    49   2e-06

>Medtr4g074920.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:28559006-28543883 |
           20130731
          Length = 947

 Score =  120 bits (301), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 58/73 (79%), Positives = 64/73 (87%)

Query: 99  EHTKSLLVEFADSHLRYNKFASSFGTGLASSSGRILLQSIPGTELYQERLVRALAQHLQV 158
           EHTK+LL E A SHLR+NKFASS+G  LASSSGRILLQSIPGTELY+ER+VRALAQ LQV
Sbjct: 140 EHTKNLLTECAASHLRHNKFASSYGIHLASSSGRILLQSIPGTELYRERVVRALAQDLQV 199

Query: 159 PLLVFDRSILTPY 171
           PLLV D S+L PY
Sbjct: 200 PLLVLDSSVLAPY 212


>Medtr1g088750.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr1:39724490-39713166 |
           20130731
          Length = 1243

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 7/101 (6%)

Query: 67  TRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYN---KFASSFG 123
           TRR  F+  +  RIL  ++I+VS++TFPY + + TK++LV     HL+ N   K+AS F 
Sbjct: 417 TRRQAFRDSLEQRILKADDIDVSFETFPYYLSDTTKNVLVASTYIHLKCNGIGKYASDF- 475

Query: 124 TGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
              +S   RILL    G+E+YQE L +ALA+H    LL+ D
Sbjct: 476 ---SSLCPRILLSGPSGSEIYQETLSKALAKHFGARLLIVD 513


>Medtr1g088750.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr1:39724490-39713233 |
           20130731
          Length = 1194

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 7/101 (6%)

Query: 67  TRRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYN---KFASSFG 123
           TRR  F+  +  RIL  ++I+VS++TFPY + + TK++LV     HL+ N   K+AS F 
Sbjct: 368 TRRQAFRDSLEQRILKADDIDVSFETFPYYLSDTTKNVLVASTYIHLKCNGIGKYASDF- 426

Query: 124 TGLASSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
              +S   RILL    G+E+YQE L +ALA+H    LL+ D
Sbjct: 427 ---SSLCPRILLSGPSGSEIYQETLSKALAKHFGARLLIVD 464


>Medtr1g088730.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr1:39707851-39693314 |
           20130731
          Length = 1237

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)

Query: 68  RRDKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLA 127
           ++   K  +  RIL  ENI+VS+++FPY + + TK++L+  A  HL+ N  +  + + L 
Sbjct: 409 KQQALKDSLQMRILNAENIDVSFESFPYYLSDTTKNVLITSAYIHLKCNG-SGKYVSELP 467

Query: 128 SSSGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           S S RILL    G+E+YQE L +ALA+H    LL+ D
Sbjct: 468 SLSPRILLSGPAGSEIYQETLSKALAKHFGAWLLIVD 504


>Medtr3g089100.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr3:33915693-33929519 | 20130731
          Length = 1207

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 72  FKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASSSG 131
           FK      IL  +   VS+D FPY + E+TK++L+     HL++ + A  +   L + + 
Sbjct: 381 FKEDAHAAILDGKEQEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAK-YTADLPTVNP 439

Query: 132 RILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSIL 168
           RILL    G+E+Y E LV+ALA++    LL+FD  +L
Sbjct: 440 RILLSGPAGSEIYSEMLVKALAKYFGAKLLIFDSQLL 476


>Medtr3g089100.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr3:33915623-33929519 | 20130731
          Length = 1236

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 72  FKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASSSG 131
           FK      IL  +   VS+D FPY + E+TK++L+     HL++ + A  +   L + + 
Sbjct: 410 FKEDAHAAILDGKEQEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAK-YTADLPTVNP 468

Query: 132 RILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSIL 168
           RILL    G+E+Y E LV+ALA++    LL+FD  +L
Sbjct: 469 RILLSGPAGSEIYSEMLVKALAKYFGAKLLIFDSQLL 505


>Medtr3g089100.3 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr3:33915623-33929666 | 20130731
          Length = 1202

 Score = 64.3 bits (155), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%)

Query: 72  FKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASSSG 131
           FK      IL  +   VS+D FPY + E+TK++L+     HL++ + A  +   L + + 
Sbjct: 376 FKEDAHAAILDGKEQEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAK-YTADLPTVNP 434

Query: 132 RILLQSIPGTELYQERLVRALAQHLQVPLLVFDRSIL 168
           RILL    G+E+Y E LV+ALA++    LL+FD  +L
Sbjct: 435 RILLSGPAGSEIYSEMLVKALAKYFGAKLLIFDSQLL 471


>Medtr8g099065.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr8:41595411-41588626 |
           20130731
          Length = 860

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 70  DKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASS 129
           DK + ++L +I+     NV++D FPY + E T+ LL   A  HL++ +  S +   LA +
Sbjct: 49  DKIEHEMLRQIVDGRESNVTFDKFPYYLSEQTRVLLTSAAYVHLKHAE-VSKYTRNLAPA 107

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           S  ILL S P  ELYQ+ L +ALA + +  LL+ D
Sbjct: 108 SRTILL-SGPA-ELYQQVLAKALAHYFEAKLLLLD 140


>Medtr8g099065.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr8:41595410-41589905 |
           20130731
          Length = 703

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 70  DKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASS 129
           DK + ++L +I+     NV++D FPY + E T+ LL   A  HL++ +  S +   LA +
Sbjct: 49  DKIEHEMLRQIVDGRESNVTFDKFPYYLSEQTRVLLTSAAYVHLKHAE-VSKYTRNLAPA 107

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           S  ILL      ELYQ+ L +ALA + +  LL+ D
Sbjct: 108 SRTILLSG--PAELYQQVLAKALAHYFEAKLLLLD 140


>Medtr5g009840.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr5:2485927-2491615 |
           20130731
          Length = 832

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 3/95 (3%)

Query: 70  DKFKIQILTRILPWENINVSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASS 129
           DK + ++L  ++     NV++D FPY + E T+ LL   A  HL++ +  S +   LA +
Sbjct: 44  DKIENEMLRLVVDGRESNVTFDNFPYYLSEQTRVLLTSAAYVHLKHAE-VSKYTRNLAPA 102

Query: 130 SGRILLQSIPGTELYQERLVRALAQHLQVPLLVFD 164
           S  ILL S P  ELYQ+ L +AL  + +  LL+FD
Sbjct: 103 SRTILL-SGPA-ELYQQVLAKALTHYFEAKLLLFD 135


>Medtr6g033740.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr6:11098780-11092505 |
           20130731
          Length = 813

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 3/77 (3%)

Query: 88  VSWDTFPYPIDEHTKSLLVEFADSHLRYNKFASSFGTGLASSSGRILLQSIPGTELYQER 147
           V++D FPY + E T+ LL   A  HL++  F+    T   S + R +L S P  ELYQ+ 
Sbjct: 63  VTFDEFPYYLSEKTRVLLTSAAYVHLKHLNFSKH--TRNLSPASRAILLSGPA-ELYQQM 119

Query: 148 LVRALAQHLQVPLLVFD 164
           L +ALA +    LL+ D
Sbjct: 120 LAKALAHYFDSKLLLLD 136