Miyakogusa Predicted Gene

Lj0g3v0253379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253379.1 Non Characterized Hit- tr|K4ARJ2|K4ARJ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,97.73,0.000000000000001,coiled-coil,NULL;
seg,NULL,gene.g19775.t1.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g067150.1 | RabGAP/TBC domain protein | HC | chr1:28910918...   237   4e-63
Medtr1g067150.2 | RabGAP/TBC domain protein | HC | chr1:28910918...   237   4e-63
Medtr1g116310.1 | RabGAP/TBC domain protein | HC | chr1:52566606...   162   2e-40

>Medtr1g067150.1 | RabGAP/TBC domain protein | HC |
            chr1:28910918-28895825 | 20130731
          Length = 1166

 Score =  237 bits (605), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/172 (75%), Positives = 137/172 (79%), Gaps = 5/172 (2%)

Query: 1    MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
            ME VKEDNRLQLSAR                DKKEQEAAMLQVL+RLEQDQKVTEDARRR
Sbjct: 996  MEKVKEDNRLQLSARIEQLEQEVAVLQQALTDKKEQEAAMLQVLIRLEQDQKVTEDARRR 1055

Query: 61   AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKALSSPRAG 120
            AE +LAAQK EVH+LQ+KYEKAM SIAEMQKRV MAESMLEATL YESGQSKALSSPRAG
Sbjct: 1056 AEQDLAAQKLEVHMLQEKYEKAMVSIAEMQKRVKMAESMLEATLQYESGQSKALSSPRAG 1115

Query: 121  ----PSRKIGLLSFGLGWRDRNKGKPNAEESNESLPDSVTPRKESNNQEQGK 168
                P RK GLLSFGLGWRDR +GKPN EES+ES  D+ TPRKESN +EQ K
Sbjct: 1116 RVENPPRK-GLLSFGLGWRDRYRGKPNTEESSESPRDNATPRKESNKEEQDK 1166


>Medtr1g067150.2 | RabGAP/TBC domain protein | HC |
            chr1:28910918-28895794 | 20130731
          Length = 1166

 Score =  237 bits (605), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/172 (75%), Positives = 137/172 (79%), Gaps = 5/172 (2%)

Query: 1    MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
            ME VKEDNRLQLSAR                DKKEQEAAMLQVL+RLEQDQKVTEDARRR
Sbjct: 996  MEKVKEDNRLQLSARIEQLEQEVAVLQQALTDKKEQEAAMLQVLIRLEQDQKVTEDARRR 1055

Query: 61   AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKALSSPRAG 120
            AE +LAAQK EVH+LQ+KYEKAM SIAEMQKRV MAESMLEATL YESGQSKALSSPRAG
Sbjct: 1056 AEQDLAAQKLEVHMLQEKYEKAMVSIAEMQKRVKMAESMLEATLQYESGQSKALSSPRAG 1115

Query: 121  ----PSRKIGLLSFGLGWRDRNKGKPNAEESNESLPDSVTPRKESNNQEQGK 168
                P RK GLLSFGLGWRDR +GKPN EES+ES  D+ TPRKESN +EQ K
Sbjct: 1116 RVENPPRK-GLLSFGLGWRDRYRGKPNTEESSESPRDNATPRKESNKEEQDK 1166


>Medtr1g116310.1 | RabGAP/TBC domain protein | HC |
           chr1:52566606-52575082 | 20130731
          Length = 817

 Score =  162 bits (409), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/166 (55%), Positives = 110/166 (66%), Gaps = 20/166 (12%)

Query: 1   MEMVKEDNRLQLSARXXXXXXXXXXXXXXXXDKKEQEAAMLQVLMRLEQDQKVTEDARRR 60
           MEMVK+DNR +LSA+                DK+EQE AMLQVLMR+EQ+QKVTEDARR 
Sbjct: 627 MEMVKQDNRRELSAKVERLEEEVAELRQALSDKQEQETAMLQVLMRVEQEQKVTEDARRF 686

Query: 61  AEHELAAQKYEVHVLQDKYEKAMASIAEMQKRVVMAESMLEATLSYESGQSKALSSPRAG 120
           AE +  AQ+Y   VLQ+KYE+A  ++AEM+KR VMAESMLEATL Y+SGQ+K   SPR+ 
Sbjct: 687 AEQDATAQRYASQVLQEKYEEASVALAEMEKRAVMAESMLEATLQYQSGQTKLQPSPRSS 746

Query: 121 -----------------PSRKIGLLS--FGLGWRDRNKGKP-NAEE 146
                            P+R+I LLS  FGLGW DRNKGKP N EE
Sbjct: 747 QPESPGSRNNQEPTTDTPTRRISLLSRPFGLGWGDRNKGKPTNVEE 792