Miyakogusa Predicted Gene

Lj0g3v0253249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0253249.1 Non Characterized Hit- tr|G7J9T6|G7J9T6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,94.59,0.0000000000003,seg,NULL,CUFF.16632.1
         (54 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g084270.1 | hypothetical protein | HC | chr3:38045944-3804...    67   4e-12
Medtr3g105890.3 | transmembrane protein, putative | HC | chr3:48...    65   2e-11
Medtr3g105890.1 | transmembrane protein, putative | HC | chr3:48...    65   2e-11
Medtr3g105890.2 | transmembrane protein, putative | HC | chr3:48...    64   2e-11
Medtr8g461450.1 | hypothetical protein | HC | chr8:21634914-2163...    64   4e-11
Medtr3g108610.1 | hypothetical protein | LC | chr3:50152169-5015...    61   2e-10
Medtr6g070990.1 | hypothetical protein | LC | chr6:26217723-2621...    57   6e-09
Medtr2g101670.1 | hypothetical protein | LC | chr2:43741384-4374...    49   7e-07

>Medtr3g084270.1 | hypothetical protein | HC |
          chr3:38045944-38044376 | 20130731
          Length = 80

 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 31/35 (88%), Positives = 32/35 (91%)

Query: 3  HLAVEIVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 37
           LA  +VPSGTSDKIGTIQRRLAWPLRKDDTHKSR
Sbjct: 17 ELAALLVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 51


>Medtr3g105890.3 | transmembrane protein, putative | HC |
          chr3:48836748-48839897 | 20130731
          Length = 113

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/30 (96%), Positives = 30/30 (100%)

Query: 8  IVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 37
          +VPSGTSDKIGTIQRRLAWPLRKDDTHKSR
Sbjct: 26 LVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 55


>Medtr3g105890.1 | transmembrane protein, putative | HC |
          chr3:48836748-48839897 | 20130731
          Length = 113

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/30 (96%), Positives = 30/30 (100%)

Query: 8  IVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 37
          +VPSGTSDKIGTIQRRLAWPLRKDDTHKSR
Sbjct: 26 LVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 55


>Medtr3g105890.2 | transmembrane protein, putative | HC |
          chr3:48836748-48839897 | 20130731
          Length = 88

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/30 (96%), Positives = 30/30 (100%)

Query: 8  IVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 37
          +VPSGTSDKIGTIQRRLAWPLRKDDTHKSR
Sbjct: 26 LVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 55


>Medtr8g461450.1 | hypothetical protein | HC |
          chr8:21634914-21634222 | 20130731
          Length = 69

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 29/30 (96%), Positives = 30/30 (100%)

Query: 8  IVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 37
          +VPSGTSDKIGTIQRRLAWPLRKDDTHKSR
Sbjct: 4  LVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 33


>Medtr3g108610.1 | hypothetical protein | LC |
          chr3:50152169-50154150 | 20130731
          Length = 112

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/30 (93%), Positives = 29/30 (96%)

Query: 8  IVPSGTSDKIGTIQRRLAWPLRKDDTHKSR 37
          +VP GTSDKIGTIQRRLAWPLRKDDTHKSR
Sbjct: 45 LVPLGTSDKIGTIQRRLAWPLRKDDTHKSR 74


>Medtr6g070990.1 | hypothetical protein | LC |
          chr6:26217723-26216302 | 20130731
          Length = 94

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 27/28 (96%)

Query: 8  IVPSGTSDKIGTIQRRLAWPLRKDDTHK 35
          +VPSGTSDKIGTIQRRLAWPLRKDDT +
Sbjct: 37 LVPSGTSDKIGTIQRRLAWPLRKDDTDQ 64


>Medtr2g101670.1 | hypothetical protein | LC |
          chr2:43741384-43741593 | 20130731
          Length = 69

 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 23/29 (79%), Positives = 24/29 (82%)

Query: 9  VPSGTSDKIGTIQRRLAWPLRKDDTHKSR 37
          VPSGTSDKI TI RRL W L KDDTH+SR
Sbjct: 21 VPSGTSDKIKTIHRRLTWLLHKDDTHQSR 49