Miyakogusa Predicted Gene

Lj0g3v0252939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252939.1 Non Characterized Hit- tr|I1MKV7|I1MKV7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,47.92,0.0000002,
,CUFF.16621.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g027510.1 | transcription factor, putative | HC | chr6:950...    55   1e-08
Medtr7g086730.1 | transcription factor, putative | HC | chr7:337...    53   1e-07
Medtr7g086730.3 | transcription factor, putative | HC | chr7:337...    53   1e-07
Medtr7g086730.2 | transcription factor, putative | HC | chr7:337...    53   1e-07
Medtr6g027510.2 | transcription factor, putative | HC | chr6:950...    47   4e-06

>Medtr6g027510.1 | transcription factor, putative | HC |
          chr6:9506956-9492623 | 20130731
          Length = 624

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 33/48 (68%)

Query: 1  MMFCDLCVKFVTGLRINDALVCCNECGKMLVNLFMPEEPNFEKNSAGQ 48
          M+ CD C++ V+G RI++  +CC  CGK+L   F+  EP F+K +AGQ
Sbjct: 1  MVNCDHCLRNVSGTRIDEGQLCCEYCGKVLEECFLSNEPTFQKGAAGQ 48



 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 31/93 (33%)

Query: 51  KQRRAEEAKNLGPPQSAAEATKQMLITKQV-----------------APKNPKKVRSSDN 93
           +++RAEE + LGP QSA EAT +ML TK++                 AP+NPKKVR    
Sbjct: 521 RKQRAEEERRLGPAQSAVEATSRMLKTKRLSSKVNLDRLDKLFDKPAAPENPKKVR---- 576

Query: 94  HDYLKSKFEDKIQDDDLGLVDEF-EDGGMHEDY 125
                  FE K  +D+L  V+EF  D  M+ +Y
Sbjct: 577 -------FETK--EDELEPVNEFPADEDMYAEY 600


>Medtr7g086730.1 | transcription factor, putative | HC |
           chr7:33722751-33735884 | 20130731
          Length = 575

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 35/99 (35%)

Query: 51  KQRRAEEAKNLGPPQSAAEATKQMLITKQVAPK------------------NPKKVR--- 89
           KQRRA++AK  GP QSA EA  QM+  K ++ K                  NPKKVR   
Sbjct: 470 KQRRAQQAKKSGPAQSAVEAACQMVKRKGLSNKVNMDNFAKLFEDKPADERNPKKVRFDL 529

Query: 90  SSDNHDYLKSKFEDKIQDDDLGLVDEFEDGGMHEDYYGN 128
           +SDNH            DD+LG  D FEDG    D+Y N
Sbjct: 530 ASDNH------------DDELGSADYFEDGD--NDWYNN 554



 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 1  MMFCDLCVKFVTGLRINDALVCCNECGKMLVNLFMPEEPNFEKNSAGQ 48
          M++CD CVK V      +  + C  CGK+L +  + EEP F KNSAGQ
Sbjct: 1  MVYCDHCVKNVRAELHEECYLVCTSCGKVLEDQILTEEPTFTKNSAGQ 48


>Medtr7g086730.3 | transcription factor, putative | HC |
           chr7:33722735-33734326 | 20130731
          Length = 575

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 35/99 (35%)

Query: 51  KQRRAEEAKNLGPPQSAAEATKQMLITKQVAPK------------------NPKKVR--- 89
           KQRRA++AK  GP QSA EA  QM+  K ++ K                  NPKKVR   
Sbjct: 470 KQRRAQQAKKSGPAQSAVEAACQMVKRKGLSNKVNMDNFAKLFEDKPADERNPKKVRFDL 529

Query: 90  SSDNHDYLKSKFEDKIQDDDLGLVDEFEDGGMHEDYYGN 128
           +SDNH            DD+LG  D FEDG    D+Y N
Sbjct: 530 ASDNH------------DDELGSADYFEDGD--NDWYNN 554



 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 1  MMFCDLCVKFVTGLRINDALVCCNECGKMLVNLFMPEEPNFEKNSAGQ 48
          M++CD CVK V      +  + C  CGK+L +  + EEP F KNSAGQ
Sbjct: 1  MVYCDHCVKNVRAELHEECYLVCTSCGKVLEDQILTEEPTFTKNSAGQ 48


>Medtr7g086730.2 | transcription factor, putative | HC |
           chr7:33722751-33735884 | 20130731
          Length = 575

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 35/99 (35%)

Query: 51  KQRRAEEAKNLGPPQSAAEATKQMLITKQVAPK------------------NPKKVR--- 89
           KQRRA++AK  GP QSA EA  QM+  K ++ K                  NPKKVR   
Sbjct: 470 KQRRAQQAKKSGPAQSAVEAACQMVKRKGLSNKVNMDNFAKLFEDKPADERNPKKVRFDL 529

Query: 90  SSDNHDYLKSKFEDKIQDDDLGLVDEFEDGGMHEDYYGN 128
           +SDNH            DD+LG  D FEDG    D+Y N
Sbjct: 530 ASDNH------------DDELGSADYFEDGD--NDWYNN 554



 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 1  MMFCDLCVKFVTGLRINDALVCCNECGKMLVNLFMPEEPNFEKNSAGQ 48
          M++CD CVK V      +  + C  CGK+L +  + EEP F KNSAGQ
Sbjct: 1  MVYCDHCVKNVRAELHEECYLVCTSCGKVLEDQILTEEPTFTKNSAGQ 48


>Medtr6g027510.2 | transcription factor, putative | HC |
           chr6:9504895-9492625 | 20130731
          Length = 567

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 31/93 (33%)

Query: 51  KQRRAEEAKNLGPPQSAAEATKQMLITKQV-----------------APKNPKKVRSSDN 93
           +++RAEE + LGP QSA EAT +ML TK++                 AP+NPKKVR    
Sbjct: 464 RKQRAEEERRLGPAQSAVEATSRMLKTKRLSSKVNLDRLDKLFDKPAAPENPKKVR---- 519

Query: 94  HDYLKSKFEDKIQDDDLGLVDEF-EDGGMHEDY 125
                  FE K  +D+L  V+EF  D  M+ +Y
Sbjct: 520 -------FETK--EDELEPVNEFPADEDMYAEY 543