Miyakogusa Predicted Gene

Lj0g3v0252839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252839.1 Non Characterized Hit- tr|B9T7V3|B9T7V3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.88,2e-17,seg,NULL,CUFF.16590.1
         (327 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g063930.1 | transmembrane protein | HC | chr8:26812665-268...   367   e-102
Medtr1g060280.1 | transmembrane protein | LC | chr1:26234650-262...   226   3e-59
Medtr8g090020.1 | transmembrane protein | HC | chr8:37672328-376...   194   1e-49

>Medtr8g063930.1 | transmembrane protein | HC |
           chr8:26812665-26816284 | 20130731
          Length = 394

 Score =  367 bits (942), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/307 (61%), Positives = 238/307 (77%), Gaps = 9/307 (2%)

Query: 18  EVSDVLREAVMIYFRNLNFIIFTFLTSLPLLFIMLYFEIHLQEILLETSLILNQPHAHSL 77
           EVSD+L+ A++IY +N NF+IFTFLTSLPL  IM+YFEI LQE ++ET  I+N       
Sbjct: 14  EVSDILKAAIIIYVKNFNFMIFTFLTSLPLFCIMVYFEIQLQETIVETFHIVNSKDVD-- 71

Query: 78  YHHGFNPDSIMRIFNMDYVLKLIHLGFIYMVPLHLFELGSAIFTIDLASKQQYSEEKKVT 137
            HH +    +    N  Y LKLI LG IY+ PLH+ E G+AI T+DLASK    +EKK+T
Sbjct: 72  VHHSYTGSILDYFMNNYYYLKLIQLGLIYIFPLHVLEFGTAIITVDLASKLGSQQEKKMT 131

Query: 138 LNLKEIIFQKPLDLSNLRGTFVTSIYVLFLTTTHQLGLLWIVINYHVFLKDLSCYMLFFV 197
           L   +++F+K LD S LRG+F+T IYV+FLTTTHQLGLLWIVIN + +LKDLS +++F +
Sbjct: 132 L---KVMFEKSLDSSKLRGSFLTFIYVVFLTTTHQLGLLWIVINCYFYLKDLS-FVVFAL 187

Query: 198 ICSLVFAKVLRTCLEWSAMWNMSLVISVLERVYGVDALALSVYFSRGCHRRGLFLMLIFF 257
           ICS++FAK+L+  LEWS++WN SLVIS+LE +YG+DAL LS+ FSRGC R+GLFLMLIFF
Sbjct: 188 ICSMLFAKLLKMYLEWSSIWNTSLVISILEGIYGIDALVLSLNFSRGCQRKGLFLMLIFF 247

Query: 258 SWGHLLRLSCHHLIG-EQGTWSGFYIQVGLFCLVNPLKWVVFMIYFHDCKERSLEKKTDE 316
           +WG  LR  C+++ G EQG  +G +IQVGLFC+V PLKWVVFMIYFHDCKER LEKK DE
Sbjct: 248 AWGQFLRFFCYYVGGYEQG--NGIFIQVGLFCMVIPLKWVVFMIYFHDCKERYLEKKMDE 305

Query: 317 ELGKDVK 323
           ELGKDV+
Sbjct: 306 ELGKDVR 312


>Medtr1g060280.1 | transmembrane protein | LC |
           chr1:26234650-26235657 | 20130731
          Length = 335

 Score =  226 bits (575), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 140/315 (44%), Positives = 192/315 (60%), Gaps = 16/315 (5%)

Query: 18  EVSDVLREAVMIYFRNLNFIIFTFLTSLPLLFIMLYFEIHLQE-ILLETSLILNQPHAHS 76
           +V D+L++ V IYF+N+NFIIFTFLTSLP  F+M+YFE   Q+ +LL   +I + P    
Sbjct: 15  DVLDILKKTVTIYFKNINFIIFTFLTSLPYFFLMIYFETLFQQTLLLSPQIISSLPLFEK 74

Query: 77  LYHHGFNPDSIMRI----FNMDYVLKLIHLGFIYMVPLHLFELGSAIFTIDLASKQQYSE 132
           +Y  G   D++  I    F  DY+  LI LGFIY VPLH+ E  SA+ TI LASK   SE
Sbjct: 75  IYMFG--NDTLSYIGEPSFVNDYLPLLIQLGFIYTVPLHVLEFFSAVITIGLASKLS-SE 131

Query: 133 EKKVTLNLKEI--IFQKPLDLSNLRGTFVTSIYVLFLTTTHQLGLLWIVINY-HVFLKDL 189
           E     +L  I  +FQ   D+S ++ TF TS+Y+L L+    +   W VI   +      
Sbjct: 132 ENHNDTSLMSIKHMFQNSNDISIMKRTFTTSLYMLALSFGLLIACPWTVIGTCYGLYSAF 191

Query: 190 SCYMLFFVICSLVFAKVLRTCLEWSAMWNMSLVISVLERVYGVDALALSVYFSRGCHRRG 249
            CY+ F  I  +   K+L   LEWSA+WNMS+  SVL+ +YG+ AL +S ++S G  +RG
Sbjct: 192 GCYIFFATISCVAIGKLLMVYLEWSAIWNMSIATSVLDGIYGIRALRVSYFYSSGNQKRG 251

Query: 250 LFLMLIFFSWGHLLRLSCHHLIGEQGTWSGFYIQ---VGLFCLVNPLKWVVFMIYFHDCK 306
           L LML+FF +G  LRL C +    +G  SG ++    VG+  +VN LKWV  +IYF+DCK
Sbjct: 252 LVLMLVFFVYGVFLRLICIYFGCYKGG-SGIFLLIGIVGILTVVNILKWVSCVIYFNDCK 310

Query: 307 ERSLEKKT-DEELGK 320
           ER +E K  DEE+GK
Sbjct: 311 ERKMEMKVDDEEIGK 325


>Medtr8g090020.1 | transmembrane protein | HC |
           chr8:37672328-37673497 | 20130731
          Length = 295

 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/258 (43%), Positives = 159/258 (61%), Gaps = 18/258 (6%)

Query: 18  EVSDVLREAVMIYFRNLNFIIFTFLTSLPLLFIMLYFEIHLQEILLETSLIL-------- 69
           +V D+L E + IYF+N+NFIIFT LTSLP  F+M+YFE   Q+ L++T  I+        
Sbjct: 16  DVLDILGETLTIYFKNINFIIFTLLTSLPFFFLMVYFETLFQQTLVQTPKIILPLPFHER 75

Query: 70  NQPHAHSLYHHGFNPDSIMRIFNMDYVLKLIHLGFIYMVPLHLFELGSAIFTIDLASKQQ 129
           NQ   +S+      P      F+ DY+  LI LGFIY +PLH  E  S + T+DLASK  
Sbjct: 76  NQLRFYSVIDIYNGPS-----FSKDYLPLLIQLGFIYTIPLHFLEFCSKVLTMDLASKLI 130

Query: 130 YSEEKKVTLNLKEIIFQKPLDLSNLRGTFVTSIYVLFLTTTHQLGLLWIVINYHVFLKDL 189
            + E+   ++LK + FQ  +D+S ++GTF+TS+Y L L+    +   W V N  +F +  
Sbjct: 131 INSEENPKMSLKHM-FQNSIDVSTMKGTFITSLYTLALSNCLLIAFPWTVSNCFIFTR-- 187

Query: 190 SCYMLFFVICSLVFAKVLRTCLEWSAMWNMSLVISVLERVYGVDALALSVYFSRGCHRRG 249
            CY++F  IC +   K+L   LE SA+WNMS+V+SVLE +YG  AL  S YFS G H+RG
Sbjct: 188 WCYIIFGSICFIAVGKLLMIYLECSAIWNMSIVVSVLEGIYGTGALKGSYYFSSGNHKRG 247

Query: 250 LFLMLIFFSWGHLLRLSC 267
           L +ML+FF +G +  LSC
Sbjct: 248 LVMMLVFFVFGGV--LSC 263