Miyakogusa Predicted Gene
- Lj0g3v0252829.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0252829.2 tr|A0EVX4|A0EVX4_9FABA Spermidine synthase
OS=Ammopiptanthus mongolicus GN=speE PE=2
SV=1,91.48,0,Spermidine_synth,Spermidine/spermine synthases family;
S-adenosyl-L-methionine-dependent methyltrans,CUFF.16589.2
(227 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g063940.1 | spermidine synthase | HC | chr8:26823287-26817... 388 e-108
Medtr5g034470.1 | spermidine synthase | HC | chr5:14952637-14957... 387 e-108
Medtr5g034470.2 | spermidine synthase | HC | chr5:14952706-14957... 360 e-100
Medtr3g091090.2 | spermine/spermidine synthase | HC | chr3:41402... 312 1e-85
Medtr3g091090.1 | spermine/spermidine synthase | HC | chr3:41403... 312 1e-85
Medtr1g028360.1 | spermine/spermidine synthase | HC | chr1:95411... 291 3e-79
Medtr3g078190.1 | spermidine synthase | HC | chr3:35216944-35220... 236 1e-62
Medtr5g006140.1 | thermospermine synthase ACAULIS protein | HC |... 85 5e-17
Medtr5g006140.2 | thermospermine synthase ACAULIS protein | HC |... 84 1e-16
Medtr1g015300.1 | thermospermine synthase ACAULIS protein | HC |... 72 4e-13
Medtr0044s0050.1 | hypothetical protein | LC | scaffold0044:1068... 55 7e-08
Medtr3g104960.1 | thermospermine synthase ACAULIS protein | HC |... 50 3e-06
>Medtr8g063940.1 | spermidine synthase | HC | chr8:26823287-26817588
| 20130731
Length = 342
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/225 (81%), Positives = 200/225 (88%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+THL LCSI NP RE++RHSS+EKIDICEID MVV+VSKQFFP+VA
Sbjct: 116 MITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNMVVEVSKQFFPEVA 175
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGF+D RVTLRIGDGVAFLK APEG+YDAVIVDSSDPIGPAQELFEKPFF+ VA+ALRPG
Sbjct: 176 VGFNDPRVTLRIGDGVAFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFQSVARALRPG 235
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+CTQAESIWLHM IIE+IV+NCR+IFKGSVNYAWTTV TYPSGMIGFMLCSTEG VD
Sbjct: 236 GVMCTQAESIWLHMDIIENIVSNCREIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGALVD 295
Query: 181 FKHPVNPIDEKECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSE 225
FKHPVNP+DE ECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGS+
Sbjct: 296 FKHPVNPMDENECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSK 340
>Medtr5g034470.1 | spermidine synthase | HC | chr5:14952637-14957856
| 20130731
Length = 343
Score = 387 bits (993), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/227 (81%), Positives = 198/227 (87%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+THL LCSIPNP RE+SRH+SVEKIDICEIDKMVVDVSKQFFPD+A
Sbjct: 117 MITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHASVEKIDICEIDKMVVDVSKQFFPDIA 176
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGF+D RVTL IGDGVAFLK APEG+YDAVIVDSSDPIGPAQELFEKPFFE VA+ALRPG
Sbjct: 177 VGFEDPRVTLHIGDGVAFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFESVARALRPG 236
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+CTQAESIWLHMHIIEDIV NCRQ+FKGSVNYAWTTV TYPSGMIGFMLCSTEGP VD
Sbjct: 237 GVVCTQAESIWLHMHIIEDIVVNCRQVFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVD 296
Query: 181 FKHPVNPIDEKECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSEAT 227
FKHPVNPIDE + Q + RPLKFYNSEIH+AAFCLPSFAKR I S++
Sbjct: 297 FKHPVNPIDENDSQHAGRPLKFYNSEIHSAAFCLPSFAKRAIASKSN 343
>Medtr5g034470.2 | spermidine synthase | HC | chr5:14952706-14957807
| 20130731
Length = 349
Score = 360 bits (923), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/220 (78%), Positives = 186/220 (84%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+THL LCSIPNP RE+SRH+SVEKIDICEIDKMVVDVSKQFFPD+A
Sbjct: 117 MITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHASVEKIDICEIDKMVVDVSKQFFPDIA 176
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGF+D RVTL IGDGVAFLK APEG+YDAVIVDSSDPIGPAQELFEKPFFE VA+ALRPG
Sbjct: 177 VGFEDPRVTLHIGDGVAFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFESVARALRPG 236
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+CTQAESIWLHMHIIEDIV NCRQ+FKGSVNYAWTTV TYPSGMIGFMLCSTEGP VD
Sbjct: 237 GVVCTQAESIWLHMHIIEDIVVNCRQVFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVD 296
Query: 181 FKHPVNPIDEKECQKSVRPLKFYNSEIHTAAFCLPSFAKR 220
FKHPVNPIDE + Q + RPLKFYNSE+ + CL S +
Sbjct: 297 FKHPVNPIDENDSQHAGRPLKFYNSEVGCSNTCLLSLTPK 336
>Medtr3g091090.2 | spermine/spermidine synthase | HC |
chr3:41402883-41398064 | 20130731
Length = 358
Score = 312 bits (800), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 145/223 (65%), Positives = 178/223 (79%), Gaps = 1/223 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+ HL LCSIP+P RE+SRHSSVE IDICEIDKMV+DVS++FFP++A
Sbjct: 131 MIAHLPLCSIPSPKNVLVVGGGDGGVLREVSRHSSVEHIDICEIDKMVIDVSRKFFPELA 190
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGFDD RV L +GD + FLK APEG YDAVIVDSSDP+GPAQEL EKPFFE ++KALRPG
Sbjct: 191 VGFDDPRVHLHVGDAIEFLKRAPEGRYDAVIVDSSDPVGPAQELVEKPFFETISKALRPG 250
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+I+D+++ CR+ FKGSV+YAW +V TYPSG+IGF+LCSTEGP VD
Sbjct: 251 GVLCNMAESMWLHTHLIQDMLSICRETFKGSVHYAWASVPTYPSGVIGFLLCSTEGPHVD 310
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKI 222
F +P+NPI++ E K R L+FYNSEIHTAAF LP+F K ++
Sbjct: 311 FVNPINPIEKLEGADKHRRNLRFYNSEIHTAAFALPAFLKNEV 353
>Medtr3g091090.1 | spermine/spermidine synthase | HC |
chr3:41403678-41398064 | 20130731
Length = 358
Score = 312 bits (800), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 145/223 (65%), Positives = 178/223 (79%), Gaps = 1/223 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+ HL LCSIP+P RE+SRHSSVE IDICEIDKMV+DVS++FFP++A
Sbjct: 131 MIAHLPLCSIPSPKNVLVVGGGDGGVLREVSRHSSVEHIDICEIDKMVIDVSRKFFPELA 190
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGFDD RV L +GD + FLK APEG YDAVIVDSSDP+GPAQEL EKPFFE ++KALRPG
Sbjct: 191 VGFDDPRVHLHVGDAIEFLKRAPEGRYDAVIVDSSDPVGPAQELVEKPFFETISKALRPG 250
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+I+D+++ CR+ FKGSV+YAW +V TYPSG+IGF+LCSTEGP VD
Sbjct: 251 GVLCNMAESMWLHTHLIQDMLSICRETFKGSVHYAWASVPTYPSGVIGFLLCSTEGPHVD 310
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKI 222
F +P+NPI++ E K R L+FYNSEIHTAAF LP+F K ++
Sbjct: 311 FVNPINPIEKLEGADKHRRNLRFYNSEIHTAAFALPAFLKNEV 353
>Medtr1g028360.1 | spermine/spermidine synthase | HC |
chr1:9541147-9544464 | 20130731
Length = 374
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 171/223 (76%), Gaps = 2/223 (0%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
M+THL LCSI +P RE+ RHSSV +DICEIDKMV+DVSK++FP++A
Sbjct: 136 MITHLPLCSIQSPKTVLVVGGGDGGVLREVCRHSSVTHVDICEIDKMVIDVSKKYFPELA 195
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
VGF+D RV L +GD V FL+ PEG YDA+IVDSSDP+GPAQEL EKPFF +AKALRPG
Sbjct: 196 VGFEDPRVHLHVGDAVEFLRFTPEGKYDAIIVDSSDPVGPAQELVEKPFFVTLAKALRPG 255
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVD 180
GV+C AES+WLH H+I+D+++ C+Q F SV YAWTTV TYPSG+IGF+LCS EGPPVD
Sbjct: 256 GVLCNMAESMWLHTHLIQDMISICQQTF-ASVRYAWTTVPTYPSGVIGFILCSKEGPPVD 314
Query: 181 FKHPVNPIDEKE-CQKSVRPLKFYNSEIHTAAFCLPSFAKRKI 222
F +P+NPI+ E K R L+FYNSE+H AAF LP+F KR++
Sbjct: 315 FVNPINPIEIFEGTAKYTRELRFYNSEMHKAAFALPAFLKREV 357
>Medtr3g078190.1 | spermidine synthase | HC | chr3:35216944-35220034
| 20130731
Length = 323
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/231 (51%), Positives = 151/231 (65%), Gaps = 21/231 (9%)
Query: 1 MMTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVA 60
MMTHL LCSIPNP REISRHSSVE+IDICEID M++DV K++FPD+A
Sbjct: 106 MMTHLPLCSIPNPKKVLLFGGGDGGILREISRHSSVEQIDICEIDTMLIDVYKKYFPDIA 165
Query: 61 VGFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPIGPAQELFEKPFFELVAKALRPG 120
+G+ D RV L + DG FL P+G+YDA+IVD+ DP+ L G
Sbjct: 166 IGYKDPRVKLHVIDGTIFLNSVPKGTYDAIIVDAFDPV-----------------TLCLG 208
Query: 121 GVICTQAESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPS----GMIGFMLCSTEG 176
V+C Q ES W IE+++ R+IFKGS +YAWT V TYP G+IGF+LCSTEG
Sbjct: 209 RVLCIQGESFWFKSLDIEELLIKSRKIFKGSSDYAWTNVPTYPRQVNIGVIGFLLCSTEG 268
Query: 177 PPVDFKHPVNPIDEKECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSEAT 227
P VDF++P+NPI + S PLK+YNSE+H+A+FCLPSFAKR +++T
Sbjct: 269 PYVDFRNPINPIGPENYGISKHPLKYYNSEVHSASFCLPSFAKRTEANKST 319
>Medtr5g006140.1 | thermospermine synthase ACAULIS protein | HC |
chr5:786812-783809 | 20130731
Length = 328
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 2 MTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAV 61
+ H AL P P RE+ RH +++K+ +C+ID+ VV+ K +
Sbjct: 88 LVHPALLHHPMPKNVFIMGGGEGSTARELLRHKTIDKVVMCDIDEEVVEFCKSYLVVNKE 147
Query: 62 GFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPI--GPAQELFEKPFFELVAK-ALR 118
F D R+ + I D A L E E YD ++ D +DPI GP +L+ K F+EL K L+
Sbjct: 148 AFHDSRLEVVINDAKAEL-EGKEEKYDVIVGDLADPIEGGPCYKLYTKDFYELTLKPKLK 206
Query: 119 PGGVICTQA--ESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEG 176
GG+ TQA I+ H + I RQ+FK V Y+ + +Y + + G++L S
Sbjct: 207 KGGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYS-AHIPSY-ADIWGWVLASD-- 262
Query: 177 PPVDFKHPVNPIDEKECQKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSEA 226
P+D +D + Q+ + ++ + + ++ L + + +E
Sbjct: 263 SPLDL--SAEELDIRMRQRIIEENRYLDGKTFVSSSTLSKAVRNSLNNET 310
>Medtr5g006140.2 | thermospermine synthase ACAULIS protein | HC |
chr5:786812-783809 | 20130731
Length = 262
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 2 MTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAV 61
+ H AL P P RE+ RH +++K+ +C+ID+ VV+ K +
Sbjct: 88 LVHPALLHHPMPKNVFIMGGGEGSTARELLRHKTIDKVVMCDIDEEVVEFCKSYLVVNKE 147
Query: 62 GFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPI--GPAQELFEKPFFELVAK-ALR 118
F D R+ + I D A L E E YD ++ D +DPI GP +L+ K F+EL K L+
Sbjct: 148 AFHDSRLEVVINDAKAEL-EGKEEKYDVIVGDLADPIEGGPCYKLYTKDFYELTLKPKLK 206
Query: 119 PGGVICTQA--ESIWLHMHIIEDIVANCRQIFKGSVNYA 155
GG+ TQA I+ H + I RQ+FK V Y+
Sbjct: 207 KGGIFVTQAGPAGIFSHTEVFSCIYNTLRQVFKYVVPYS 245
>Medtr1g015300.1 | thermospermine synthase ACAULIS protein | HC |
chr1:3769235-3765574 | 20130731
Length = 337
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 2 MTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAV 61
+ H +L NP RE +H S+EK+ +C+IDK VVD +++
Sbjct: 95 LIHPSLLCHSNPKTVFIMGGGEGSAAREALKHKSMEKVVMCDIDKEVVDFCRKYLVANKE 154
Query: 62 GFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPI--GPAQELFEKPFFELVAK-ALR 118
F D+++ L I A L++ E +D ++ D +DP+ GP +L+ K F+E V K L
Sbjct: 155 AFADKKLDLVINCAKAELEKRKE-KFDIIVGDLADPLEDGPCYQLYTKSFYEKVVKPKLT 213
Query: 119 PGGVICTQA--ESIWLHMHIIEDIVANCRQIFKGSVNYA 155
G+ TQA I+ H + I +Q+FK V Y
Sbjct: 214 ENGIFVTQAGPAGIFSHKEVFTSIHNTIKQVFKYVVAYG 252
>Medtr0044s0050.1 | hypothetical protein | LC |
scaffold0044:10685-8991 | 20130731
Length = 132
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 58/154 (37%), Gaps = 41/154 (26%)
Query: 76 VAFLKEAPEGSYDAVIVD---------SSDPIGPAQELFEKPFFELVAKALRPGGVICTQ 126
FL P+GSYDA+IV+ S + G AL G V+C Q
Sbjct: 10 TTFLTYVPKGSYDAIIVNAFDLGPMPKSDESAGTNDTFIPNNNIHRPRGALCLGRVLCIQ 69
Query: 127 AESIWLHMHIIEDIVANCRQIFKGSVNYAWTTVHTYPSGMIGFMLCSTEGPPVDFKHPVN 186
ES W IE ++ RQIFKGS +Y+ V
Sbjct: 70 GESFWFKSLDIEQLLIKSRQIFKGSNDYSRANV--------------------------- 102
Query: 187 PIDEKECQKSVRPLKFYNSEIHTAAFCLPSFAKR 220
P++E + S L F H+ +FC PS KR
Sbjct: 103 PVNEHVLRISQLELLF-----HSYSFCSPSIGKR 131
>Medtr3g104960.1 | thermospermine synthase ACAULIS protein | HC |
chr3:48391839-48388037 | 20130731
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Query: 2 MTHLALCSIPNPXXXXXXXXXXXXXXREISRHSSVEKIDICEIDKMVVDVSKQFFPDVAV 61
+ H L PNP RE +H+ V + VVD K++
Sbjct: 97 LIHPPLLCHPNPKRVFIMGGGEGSATRESLKHNQVIE---------VVDFCKKYLITNRE 147
Query: 62 GFDDQRVTLRIGDGVAFLKEAPEGSYDAVIVDSSDPI--GPAQELFEKPFFELVAK-ALR 118
F +++ L I D A L++ E +D ++ D +DP+ GP +L+ K F+E + K L
Sbjct: 148 AFAHKKLDLVINDDKAELEKRKE-KFDIIVGDLADPVEGGPCYQLYTKSFYENILKPKLN 206
Query: 119 PGGVICTQA--ESIWLHMHIIEDIVANCRQIFKGSVNYA 155
+ TQA I H + I +Q+FK + Y
Sbjct: 207 ENDIFVTQAGPAGILTHREVFTSIYNTIKQVFKYVIVYT 245