Miyakogusa Predicted Gene
- Lj0g3v0252619.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0252619.1 CUFF.16577.1
(127 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g050428.1 | urease accessory protein UreD | HC | chr1:1939... 201 1e-52
>Medtr1g050428.1 | urease accessory protein UreD | HC |
chr1:19390714-19387259 | 20130731
Length = 302
Score = 201 bits (512), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/120 (80%), Positives = 108/120 (90%)
Query: 8 MLLEKEKIGCIKNHMQDYQVIAMIVLLGPNMQYIQKLVQDNVKRIMSEKLQHPSAALNHQ 67
MLLEK+K G +K HMQDYQVIAMIVLLGP MQYIQ +VQDNVKRIMSE+L +PSAAL+HQ
Sbjct: 183 MLLEKDKFGRVKEHMQDYQVIAMIVLLGPKMQYIQNIVQDNVKRIMSEQLHNPSAALSHQ 242
Query: 68 RDKADHFMTKPNFMASCSVFGPKKIGLLVRVASVTTKSVYKFLQHQLAPLEPIIGVSPYR 127
+ KAD F TKP F+ASCSVFGPKKIGL+VRVASVTT+SVYKFL+HQLAPLE +IGV PYR
Sbjct: 243 KKKADFFTTKPTFVASCSVFGPKKIGLVVRVASVTTESVYKFLRHQLAPLEQMIGVPPYR 302