Miyakogusa Predicted Gene

Lj0g3v0252529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252529.1 tr|E1VJ34|E1VJ34_9GAMM Esterase A OS=gamma
proteobacterium HdN1 GN=HDN1F_12430 PE=4
SV=1,34.88,9e-17,Beta-lactamase,Beta-lactamase-related; no
description,Beta-lactamase/transpeptidase-like;
beta-lacta,CUFF.16568.1
         (375 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g008980.1 | ABC1 family protein | HC | chr1:1119784-112926...   350   1e-96

>Medtr1g008980.1 | ABC1 family protein | HC | chr1:1119784-1129267 |
           20130731
          Length = 832

 Score =  350 bits (899), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 167/228 (73%), Positives = 189/228 (82%), Gaps = 2/228 (0%)

Query: 1   MADLNQENPLLMLDWDECLKRICMSVPETEPGKEQIYHYLSFGWLCGGIIEHASGKKFQE 60
           MAD+NQENPL+MLDWDECL RIC+S PETEPGK QIYHYLSFGWLCGGIIEHASGKKFQE
Sbjct: 571 MADINQENPLIMLDWDECLNRICISAPETEPGKVQIYHYLSFGWLCGGIIEHASGKKFQE 630

Query: 61  ILEEAIVRPLHIEGELYIGIPPGVEARLAALTVDTDDLSKLSAIPTRPDLPSTFQPQQIA 120
           ILEE+IVRPL IEGELY+GIPPGVE+RLAALTVDTDDLSKLSAI +RP+LPSTFQPQQIA
Sbjct: 631 ILEESIVRPLQIEGELYVGIPPGVESRLAALTVDTDDLSKLSAIGSRPELPSTFQPQQIA 690

Query: 121 RSATTLPAVFNTLHVRRAIIPAANGHLSXXXXXXXXXXXXDGGKIPPPHSSDSKPVLGSH 180
           + AT++P +FNTL+VRRAIIPAANGH+S            DGGKIP PHSS SKP+LGSH
Sbjct: 691 QMATSVPPIFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPSPHSSTSKPLLGSH 750

Query: 181 PHIPKLSSQKAPQNRKCFRRKEATLPSMSNTRSYEKVSSSENFEVSEG 228
            HIPKLSSQKAP+ RKC  R   TLP+++  +SYEK    +   V + 
Sbjct: 751 THIPKLSSQKAPKKRKCIGRTVTTLPAVN--KSYEKFLVKKTLRVQKA 796