Miyakogusa Predicted Gene
- Lj0g3v0252529.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0252529.1 tr|E1VJ34|E1VJ34_9GAMM Esterase A OS=gamma
proteobacterium HdN1 GN=HDN1F_12430 PE=4
SV=1,34.88,9e-17,Beta-lactamase,Beta-lactamase-related; no
description,Beta-lactamase/transpeptidase-like;
beta-lacta,CUFF.16568.1
(375 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g008980.1 | ABC1 family protein | HC | chr1:1119784-112926... 350 1e-96
>Medtr1g008980.1 | ABC1 family protein | HC | chr1:1119784-1129267 |
20130731
Length = 832
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 167/228 (73%), Positives = 189/228 (82%), Gaps = 2/228 (0%)
Query: 1 MADLNQENPLLMLDWDECLKRICMSVPETEPGKEQIYHYLSFGWLCGGIIEHASGKKFQE 60
MAD+NQENPL+MLDWDECL RIC+S PETEPGK QIYHYLSFGWLCGGIIEHASGKKFQE
Sbjct: 571 MADINQENPLIMLDWDECLNRICISAPETEPGKVQIYHYLSFGWLCGGIIEHASGKKFQE 630
Query: 61 ILEEAIVRPLHIEGELYIGIPPGVEARLAALTVDTDDLSKLSAIPTRPDLPSTFQPQQIA 120
ILEE+IVRPL IEGELY+GIPPGVE+RLAALTVDTDDLSKLSAI +RP+LPSTFQPQQIA
Sbjct: 631 ILEESIVRPLQIEGELYVGIPPGVESRLAALTVDTDDLSKLSAIGSRPELPSTFQPQQIA 690
Query: 121 RSATTLPAVFNTLHVRRAIIPAANGHLSXXXXXXXXXXXXDGGKIPPPHSSDSKPVLGSH 180
+ AT++P +FNTL+VRRAIIPAANGH+S DGGKIP PHSS SKP+LGSH
Sbjct: 691 QMATSVPPIFNTLNVRRAIIPAANGHVSARALARYYAALADGGKIPSPHSSTSKPLLGSH 750
Query: 181 PHIPKLSSQKAPQNRKCFRRKEATLPSMSNTRSYEKVSSSENFEVSEG 228
HIPKLSSQKAP+ RKC R TLP+++ +SYEK + V +
Sbjct: 751 THIPKLSSQKAPKKRKCIGRTVTTLPAVN--KSYEKFLVKKTLRVQKA 796