Miyakogusa Predicted Gene

Lj0g3v0252459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0252459.1 Non Characterized Hit- tr|I1JG77|I1JG77_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.40655
PE,54.7,6e-17,seg,NULL,CUFF.16560.1
         (102 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g052770.1 | hypothetical protein | HC | chr1:21723890-2172...    80   6e-16

>Medtr1g052770.1 | hypothetical protein | HC |
           chr1:21723890-21724510 | 20130731
          Length = 107

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 8/82 (9%)

Query: 28  EEEVLDNKEEDI-------TCCTPKAKRFRIPEVLTCXXXXXXXXXXXXXXXCSSINRSP 80
           E   +D+ ++DI        C TPKAKRFRIP+VLTC               CSSINRSP
Sbjct: 27  ENTEVDDTKKDIIFSSSSSGCSTPKAKRFRIPKVLTCPPAPKKRRVTPPSA-CSSINRSP 85

Query: 81  IALFASPDIDLFFLSALNNVSV 102
           I+LF+SPDI+LFF SALNNVSV
Sbjct: 86  ISLFSSPDIELFFFSALNNVSV 107