Miyakogusa Predicted Gene

Lj0g3v0251809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251809.1 tr|I0YP46|I0YP46_9CHLO SMAD/FHA domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4 SV=,39.1,2e-17,SMAD/FHA
domain,SMAD/FHA domain; seg,NULL; NUCLEAR INHIBITOR OF PROTEIN
PHOSPHATASE-1,NULL; Forkhead,CUFF.16504.1
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g079520.1 | smad/FHA domain protein | HC | chr3:35897947-3...   274   6e-74
Medtr3g479600.1 | smad/FHA domain protein | HC | chr3:35841954-3...   274   6e-74
Medtr5g017350.4 | zeaxanthin epoxidase | HC | chr5:6313511-63231...    53   3e-07
Medtr5g017350.2 | zeaxanthin epoxidase | HC | chr5:6313511-63231...    50   2e-06

>Medtr3g079520.1 | smad/FHA domain protein | HC |
           chr3:35897947-35896335 | 20130731
          Length = 228

 Score =  274 bits (700), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 151/222 (68%), Positives = 171/222 (77%), Gaps = 9/222 (4%)

Query: 1   MESIVVQSLSLAKIPKSQACSASVLNSS---HSNATSVTFSSVTHHHLPKCFIFRLPGGV 57
           ME IV +SL L KIPKSQ CS S+LNS    HSNATSVTF+S THH L KCF+F+ PGGV
Sbjct: 1   MEGIV-KSLYLPKIPKSQTCSGSLLNSPLLLHSNATSVTFNSATHH-LHKCFLFQQPGGV 58

Query: 58  -RLKAKGKVNLGAINXXXXXXXXXXXXXRWLLEPVGDGDTRHIGFKVDMPGAYEIASSVV 116
              KA+ KVNLGAI+             RW+LEPVGDGD+RHIGFKV+ PGAYEI S+ V
Sbjct: 59  IHPKAQEKVNLGAIHASKATTPTTTTTQRWILEPVGDGDSRHIGFKVERPGAYEITSNEV 118

Query: 117 TVGRVPEKADLVIPVATVSGVHARIQKKPGKLLVTDLDSTNGTFIDDKRLRPGVISPVSS 176
           TVGRVPEKADLVIPVATVSGVHARI+ K   LLV DLDSTNGTFI DKRL+PGV++ VSS
Sbjct: 119 TVGRVPEKADLVIPVATVSGVHARIRIKQDNLLVIDLDSTNGTFIGDKRLKPGVVTTVSS 178

Query: 177 GSLVTFGDTHLAMFRVSKVGDVKAADSDTAEETEGELDPDNK 218
           GS +TFGDT+LAMFRVSK+ + KAA  DT  E EGEL+ D K
Sbjct: 179 GSYITFGDTNLAMFRVSKIEE-KAA--DTVGEPEGELENDGK 217


>Medtr3g479600.1 | smad/FHA domain protein | HC |
           chr3:35841954-35839596 | 20130731
          Length = 228

 Score =  274 bits (700), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 151/222 (68%), Positives = 171/222 (77%), Gaps = 9/222 (4%)

Query: 1   MESIVVQSLSLAKIPKSQACSASVLNSS---HSNATSVTFSSVTHHHLPKCFIFRLPGGV 57
           ME IV +SL L KIPKSQ CS S+LNS    HSNATSVTF+S THH L KCF+F+ PGGV
Sbjct: 1   MEGIV-KSLYLPKIPKSQTCSGSLLNSPLLLHSNATSVTFNSATHH-LHKCFLFQQPGGV 58

Query: 58  -RLKAKGKVNLGAINXXXXXXXXXXXXXRWLLEPVGDGDTRHIGFKVDMPGAYEIASSVV 116
              KA+ KVNLGAI+             RW+LEPVGDGD+RHIGFKV+ PGAYEI S+ V
Sbjct: 59  IHPKAQEKVNLGAIHASKATTPTTTTTQRWILEPVGDGDSRHIGFKVERPGAYEITSNEV 118

Query: 117 TVGRVPEKADLVIPVATVSGVHARIQKKPGKLLVTDLDSTNGTFIDDKRLRPGVISPVSS 176
           TVGRVPEKADLVIPVATVSGVHARI+ K   LLV DLDSTNGTFI DKRL+PGV++ VSS
Sbjct: 119 TVGRVPEKADLVIPVATVSGVHARIRIKQDNLLVIDLDSTNGTFIGDKRLKPGVVTTVSS 178

Query: 177 GSLVTFGDTHLAMFRVSKVGDVKAADSDTAEETEGELDPDNK 218
           GS +TFGDT+LAMFRVSK+ + KAA  DT  E EGEL+ D K
Sbjct: 179 GSYITFGDTNLAMFRVSKIEE-KAA--DTVGEPEGELENDGK 217


>Medtr5g017350.4 | zeaxanthin epoxidase | HC | chr5:6313511-6323118
           | 20130731
          Length = 699

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 10/117 (8%)

Query: 85  RWLLEPVGD--GDTRHIGFKVDMPGAYEIA-SSVVTVGRVPEKADLV-IPVATVSGVHAR 140
           RW+L P GD  G  + I    D    Y I  +S +++ +      L+ IP+  VS +HAR
Sbjct: 563 RWILLPCGDVPGHVKPISLNQDDTKPYIIGNTSAMSIEQEDYPGSLITIPLPQVSQLHAR 622

Query: 141 IQKKPGKLLVTDLDSTNGTFIDDKRLRPGVISP-----VSSGSLVTFGDTHLAMFRV 192
           I  K G   +TDL S +GT+I D   R  ++SP     +    ++ FG  + A +RV
Sbjct: 623 INFKDGAFFLTDLRSQHGTWITDNEGRRYMVSPNYPARIRPSHVIEFG-CNQASYRV 678


>Medtr5g017350.2 | zeaxanthin epoxidase | HC | chr5:6313511-6323118
           | 20130731
          Length = 663

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 10/116 (8%)

Query: 86  WLLEPVGD--GDTRHIGFKVDMPGAYEIA-SSVVTVGRVPEKADLV-IPVATVSGVHARI 141
           W+L P GD  G  + I    D    Y I  +S +++ +      L+ IP+  VS +HARI
Sbjct: 528 WILLPCGDVPGHVKPISLNQDDTKPYIIGNTSAMSIEQEDYPGSLITIPLPQVSQLHARI 587

Query: 142 QKKPGKLLVTDLDSTNGTFIDDKRLRPGVISP-----VSSGSLVTFGDTHLAMFRV 192
             K G   +TDL S +GT+I D   R  ++SP     +    ++ FG  + A +RV
Sbjct: 588 NFKDGAFFLTDLRSQHGTWITDNEGRRYMVSPNYPARIRPSHVIEFG-CNQASYRV 642