Miyakogusa Predicted Gene

Lj0g3v0251239.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0251239.1 Non Characterized Hit- tr|A5C0X2|A5C0X2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.02,2e-18,Cysteine-rich domain,NULL; C1_2,DC1; ZZ,Zinc finger,
ZZ-type; NUCLEOREDOXIN,NULL;
THIOREDOXIN,NULL,NODE_10192_length_1225_cov_131.973877.path3.1
         (261 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g034390.1 | cysteine/histidine-rich C1 domain protein | HC...   408   e-114
Medtr4g068790.1 | cysteine/histidine-rich C1 domain protein | HC...   384   e-107
Medtr7g025130.2 | cysteine/histidine-rich C1 domain protein | HC...   162   3e-40
Medtr7g025130.1 | cysteine/histidine-rich C1 domain protein | HC...   162   3e-40
Medtr7g024950.1 | cysteine/histidine-rich C1 domain protein | HC...   155   3e-38
Medtr7g025000.1 | cysteine/histidine-rich C1 domain protein | HC...   143   2e-34
Medtr7g024930.1 | cysteine/histidine-rich C1 domain protein | LC...   119   2e-27
Medtr1g034960.1 | cysteine/histidine-rich C1 domain protein | HC...    87   1e-17
Medtr7g093330.1 | cysteine/histidine-rich C1 domain protein | LC...    49   4e-06

>Medtr1g034390.1 | cysteine/histidine-rich C1 domain protein | HC |
           chr1:12530412-12531629 | 20130731
          Length = 267

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 203/268 (75%), Positives = 230/268 (85%), Gaps = 9/268 (3%)

Query: 2   MYSTSK-SFRKETSITNTK-CSEISHFSHPKHKLRFEYSEFPFKCDGCKEVGIGSRYKCS 59
           MYS +K S  K+T++  TK  +EISHFSH KHKL F++SEFPFKCDGCKE+GIGSRY C+
Sbjct: 1   MYSIAKFSNHKDTTMNTTKRYNEISHFSHQKHKLTFQHSEFPFKCDGCKEIGIGSRYSCN 60

Query: 60  SICDYDLHMHCAIPSPSLYHPFYPKCSFQFLSKPPGNIPRYCNACEKGVTGFVYHCMTCG 119
            ICDYDLHMHC+IPSPSL+HPFYPKC FQFLSKPPG+IPRYCNACEK VTGFVYHC +CG
Sbjct: 61  -ICDYDLHMHCSIPSPSLFHPFYPKCCFQFLSKPPGDIPRYCNACEKSVTGFVYHCFSCG 119

Query: 120 FDLHPCCAKLPMVLDD-GEIKLYLYRKVSSPCHRCGQKGRSWSYRSSCKKCNLHVACVRE 178
           FDLHPCCAKLPM+LDD GE+KLYLYRKVSS C RCGQKGRSWSYRSSCKK NLHVACVRE
Sbjct: 120 FDLHPCCAKLPMILDDHGEVKLYLYRKVSSSCQRCGQKGRSWSYRSSCKKYNLHVACVRE 179

Query: 179 MIVESWHQIYIGRS--KSNNGMKMMENGIP-SLKNTLQASHNS--RIKGKVRKCCEIAGM 233
           MIVESWHQ+Y+GRS  ++     M+E G+P SLKN L   HN   + KGKVRKC E+AGM
Sbjct: 180 MIVESWHQMYVGRSNGRTTTMSTMVETGVPMSLKNNLHTVHNGGRKSKGKVRKCAEMAGM 239

Query: 234 AVQVVVSAVLGDPTALIAGIMGSVMSRA 261
           AVQ+VVSAVLGDPT LIAGIMGS++SR+
Sbjct: 240 AVQIVVSAVLGDPTVLIAGIMGSLISRS 267


>Medtr4g068790.1 | cysteine/histidine-rich C1 domain protein | HC |
           chr4:25802034-25802774 | 20130731
          Length = 246

 Score =  384 bits (985), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 184/248 (74%), Positives = 215/248 (86%), Gaps = 8/248 (3%)

Query: 19  KCSEISHFSHPKHKLRFEYSEFPFKCDGCKEVGIGSRYKCSSICDYDLHMHCAIPSPSLY 78
           K SEISHFSHPKHKLRFE++EFPFKCDGCKE+GIGSRYKCS ICDYDLH HCAIPS +L+
Sbjct: 2   KYSEISHFSHPKHKLRFEHNEFPFKCDGCKEIGIGSRYKCS-ICDYDLHTHCAIPSTTLF 60

Query: 79  HPFYPKCSFQFLSKPPGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVLDDGEI 138
           HPFY KC+FQF+  PPGN  RYCNACEK V GFVYHC +CGFDLHPCCAKLPMVL+DGE+
Sbjct: 61  HPFYTKCTFQFMQIPPGNTLRYCNACEKDVNGFVYHCKSCGFDLHPCCAKLPMVLNDGEM 120

Query: 139 KLYLYRKVSSPCHRCGQKGRSWSYRSSCKKCNLHVACVREMIVESWHQIYIGRSKSNNGM 198
           KLYL+RKVSSPCHRCG+KGRSWSYRS+CK  NLHVACVREM+VE+W+ +Y+G  K ++  
Sbjct: 121 KLYLHRKVSSPCHRCGRKGRSWSYRSNCKSYNLHVACVREMLVENWYNLYMGHGKGSS-- 178

Query: 199 KMMENGIPSLKNTLQASHNSR----IKG-KVRKCCEIAGMAVQVVVSAVLGDPTALIAGI 253
           + +E  IPSL+NTL A+HN R     KG KV+KCCEIAG AVQ+V+SAVLGDPT LIAG+
Sbjct: 179 RKLEATIPSLQNTLYAAHNCRGSRGSKGKKVKKCCEIAGFAVQIVISAVLGDPTTLIAGV 238

Query: 254 MGSVMSRA 261
           +G++MSRA
Sbjct: 239 VGALMSRA 246


>Medtr7g025130.2 | cysteine/histidine-rich C1 domain protein | HC |
           chr7:8321856-8323227 | 20130731
          Length = 235

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 127/236 (53%), Gaps = 11/236 (4%)

Query: 30  KHKLRFEYSEFPFKCDGCKEVGIGSRYKCSSI-CDYDLHMHCAIPSPSLYHPFYPKCSFQ 88
           +H L+ +    P+ C GCKE+G GS Y C +  C Y LH  CA P P   HPF+ K  F 
Sbjct: 4   EHSLKRKPPGEPYTCSGCKELGFGSSYHCENKNCSYVLHGECAYPDPHARHPFFRKSCFD 63

Query: 89  FLSKPPGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVLDDGEIKLYLYRKVSS 148
           FL KPPG   RYCNAC   V GFVYHC   G+DLHPCC KL   + DG++KL LYRK  S
Sbjct: 64  FLRKPPGYKRRYCNACGGDVLGFVYHCSKTGYDLHPCCLKLQDSISDGDVKLQLYRKSRS 123

Query: 149 PCHRCGQKG-----RSWSYRSSCKKCNLHVACVREMIVESWHQIYIGRSKSNNGMKMMEN 203
            C +C  K      + WSY       + HV+C + +I+++W +    +   +       +
Sbjct: 124 KCVKCKHKHVVGNIQGWSYYDG--NSSYHVSCFKALILDNWRRGCFSQGHRSTTNLATTS 181

Query: 204 GIPSLKNTLQASHNSRIKGKVRKCCEIAGMAVQVVVSAVLGDPTALIAGIMGSVMS 259
           G  + + T+    + RI+  V K   +A +A +++ SA+ G+P +    I+  + S
Sbjct: 182 GGATTQLTIVGRRSGRIRSMVAK---MAVVAFKLIFSAIFGNPISFFTTILEVIAS 234


>Medtr7g025130.1 | cysteine/histidine-rich C1 domain protein | HC |
           chr7:8321958-8323227 | 20130731
          Length = 235

 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 127/236 (53%), Gaps = 11/236 (4%)

Query: 30  KHKLRFEYSEFPFKCDGCKEVGIGSRYKCSSI-CDYDLHMHCAIPSPSLYHPFYPKCSFQ 88
           +H L+ +    P+ C GCKE+G GS Y C +  C Y LH  CA P P   HPF+ K  F 
Sbjct: 4   EHSLKRKPPGEPYTCSGCKELGFGSSYHCENKNCSYVLHGECAYPDPHARHPFFRKSCFD 63

Query: 89  FLSKPPGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVLDDGEIKLYLYRKVSS 148
           FL KPPG   RYCNAC   V GFVYHC   G+DLHPCC KL   + DG++KL LYRK  S
Sbjct: 64  FLRKPPGYKRRYCNACGGDVLGFVYHCSKTGYDLHPCCLKLQDSISDGDVKLQLYRKSRS 123

Query: 149 PCHRCGQKG-----RSWSYRSSCKKCNLHVACVREMIVESWHQIYIGRSKSNNGMKMMEN 203
            C +C  K      + WSY       + HV+C + +I+++W +    +   +       +
Sbjct: 124 KCVKCKHKHVVGNIQGWSYYDG--NSSYHVSCFKALILDNWRRGCFSQGHRSTTNLATTS 181

Query: 204 GIPSLKNTLQASHNSRIKGKVRKCCEIAGMAVQVVVSAVLGDPTALIAGIMGSVMS 259
           G  + + T+    + RI+  V K   +A +A +++ SA+ G+P +    I+  + S
Sbjct: 182 GGATTQLTIVGRRSGRIRSMVAK---MAVVAFKLIFSAIFGNPISFFTTILEVIAS 234


>Medtr7g024950.1 | cysteine/histidine-rich C1 domain protein | HC |
           chr7:8263256-8261732 | 20130731
          Length = 244

 Score =  155 bits (392), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 13/239 (5%)

Query: 30  KHKLRFEYSEFPFKCDGCKEVGIGSRYKCSSI-CDYDLHMHCAIPSPSLYHPFYPKCSFQ 88
           +H    + +  P+ C GC E+G GS Y C +I C Y LH  CA P P   HPF+ +  F+
Sbjct: 7   QHSFLLKPAGAPYTCSGCGELGFGSSYHCENINCSYVLHGECAYPDPHARHPFFKESYFE 66

Query: 89  FLSKPPGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVLDDGEIKLYLYRKVSS 148
           F  KP GN  RYCNAC K V GFVYHC +  +DLHPCC KL   + D    + LY K  S
Sbjct: 67  FHKKPTGNKTRYCNACGKDVLGFVYHCSSTDYDLHPCCLKLKHSISDESGNVTLYHKARS 126

Query: 149 PCHRCGQKG-----RSWSYRSSCKKCNLHVACVREMIVESWHQIYI--GRSKSNNGMKMM 201
            C +C  K      + WSY       + HV+C + +I+E+W   Y   G     N   M 
Sbjct: 127 KCVKCKHKHVVGNFQGWSYYDG--NSSYHVSCFKALILENWRGGYFSQGDRSITNSTSMS 184

Query: 202 ENGIPSLKNTLQASHNSRIKGKVR---KCCEIAGMAVQVVVSAVLGDPTALIAGIMGSV 257
           +        +L+   +SRI  + R   K  +IA +  +++ SA+ G+P +    ++ ++
Sbjct: 185 DRETQLALTSLEMDQSSRIASRERTISKYTKIAVVVFKLIFSAIFGNPVSAFVALLEAL 243


>Medtr7g025000.1 | cysteine/histidine-rich C1 domain protein | HC |
           chr7:8279703-8280423 | 20130731
          Length = 221

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/231 (36%), Positives = 121/231 (52%), Gaps = 29/231 (12%)

Query: 30  KHKLRFEYSEFPFKCDGCKEVGIGSRYKCSSI-CDYDLHMHCAIPSPSLYHPFYPKCSFQ 88
           +H L+ +    P+ C GC E+G GS Y C +I C Y LH  CA P P  +HPF+ K  F+
Sbjct: 4   EHSLQRKPPGAPYTCTGCGELGFGSSYHCENINCSYVLHEVCANPDPYAFHPFFEKSYFE 63

Query: 89  FLSKPPGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVL--DDGEIKLYLYRKV 146
           F  KPPG   RYCNAC K V GFVYHC +  +DLHPCC KL   +  D+G + L L ++V
Sbjct: 64  FHRKPPGYKTRYCNACGKDVLGFVYHCSSTDYDLHPCCLKLQHSISDDNGNVTLNLSKRV 123

Query: 147 SSPCHRCGQKG-----RSWSYR--SSCKKCNLHVACVREMIVESWHQIYIGRSKSNNGMK 199
            S C +C  K      + WSY   +SC     HV+C +++I+++W             M 
Sbjct: 124 HSKCGKCKHKHVMGKVQGWSYYDGNSC----YHVSCFKDLILQNWR------------MG 167

Query: 200 MMENGIPSLKNTLQASHNSRIKGKVRKCCEIAGMAVQVVVSAVLGDPTALI 250
               G    +  L  S  +R   K  K   IA +  +++ SA+ G+P + +
Sbjct: 168 YFSEGDREAQLVLTRSRRTRTMSKYTK---IAVVIFKLLFSAIFGNPISAV 215


>Medtr7g024930.1 | cysteine/histidine-rich C1 domain protein | LC |
           chr7:8256085-8255147 | 20130731
          Length = 215

 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 109/240 (45%), Gaps = 41/240 (17%)

Query: 30  KHKLRFEYSEFP-FKCDGCKEVGIGSRYKC-SSICDYDLHMHCAIPSPSLYHPFYPKCSF 87
           +H L+   S  P F C GCKE+G GS Y C +S C+Y LH  CA P     HPF+  C+F
Sbjct: 4   QHTLKLNDSGAPSFMCSGCKELGFGSSYSCGNSNCNYILHEECAEPITHAVHPFFNNCTF 63

Query: 88  QFLSKPPGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVLD--DGEIKLYLYRK 145
           +F  K       +C+AC K V GF YHC   G+ LHPCC KL   +   DG + + L  +
Sbjct: 64  EFYDKVQEG--GFCDACGKDVLGFFYHCSRTGYALHPCCLKLQDKISDKDGNVIMTLCHE 121

Query: 146 VSSPCHRCGQK------GRSWSYRSSCKKCNLHVACVREMIVESWHQIYIGRSKSNNGMK 199
           V S C  C QK         WSY  S +K  +HV+C  +MI+E  +     R +    MK
Sbjct: 122 VPSDCVHCKQKYVARNQFEGWSYVYSYEKSCVHVSCFNDMILEILNNKNRSRGRKRAFMK 181

Query: 200 MMENGIPSLKNTLQASHNSRIKGKVRKCCEIAGMAVQVVVSAVLGDPTALIAGIMGSVMS 259
                                         I  + V V++  VL DPT  I  I  ++ S
Sbjct: 182 F-----------------------------IGKLVVDVLIDIVLMDPTNSITTIAEAIAS 212


>Medtr1g034960.1 | cysteine/histidine-rich C1 domain protein | HC |
           chr1:12723234-12719361 | 20130731
          Length = 313

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 80/178 (44%), Gaps = 19/178 (10%)

Query: 21  SEISHFSHPKHKLRFEYSEFPFKCDGCKEVGIGSRYKCSSICDYDLHMHCAIPSPSL-YH 79
            EI HFSHP+H L        F C GCKE G G R+ C   C+Y LH  CA+  P+L  H
Sbjct: 65  EEIIHFSHPQHPLSMVDLPDLFICVGCKEYGSGKRFVCQQ-CNYQLHDFCALAPPALKAH 123

Query: 80  PFYPKCSFQFLSKP--PGNIPRYCNACEKGVTGFVYHCMTCGFDLHPCCAKLPMVLD--- 134
           PF+ + +  F SKP   G     C+ C K   G+ + C  C F +HPCCA L   ++   
Sbjct: 124 PFHSQHAMLFHSKPVKSGMTKSKCDVCGKPTKGYTFLCTACAFQMHPCCAMLNTEIEFPN 183

Query: 135 -DGEIKLYLYRKVSSP-----------CHRCGQKGRSWSYRSSCKKCNLHVACVREMI 180
               +KL      +             C+ C ++     YR +    NLH  C +  +
Sbjct: 184 HPHTLKLTHSSTTTGTATNTDLSNTIVCNECKKRRSGKVYRCTVCNYNLHAFCAKNKV 241


>Medtr7g093330.1 | cysteine/histidine-rich C1 domain protein | LC |
           chr7:37082348-37083768 | 20130731
          Length = 408

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 70/183 (38%), Gaps = 18/183 (9%)

Query: 15  ITNTKCSEISHFSHPKHKLRFEY-SEFPFKCDGCK-----EVGIGSRYKCSSICDYDLHM 68
           ++  K S +SHFSHP    R    S    KC GC      E      Y C + C + LH 
Sbjct: 3   LSTQKESLVSHFSHPHLLERTTTPSTTNIKCFGCNLRITHEHDEDYYYMCKT-CPFYLHN 61

Query: 69  HCAIPSPSLYHPFYPKCSFQFLSKPPGN----IPRYCNACEKGVTGFVYHCMTCGFDLHP 124
            C        HP +P      L+ P  +        C AC+K   GF YHC  C      
Sbjct: 62  VCYKTPLITNHPSHPNHDLFLLAIPSSSHATKTTFNCMACKKQCIGFCYHCAECNIFFDS 121

Query: 125 CCAKLPMVLD----DGEIKLYLYRKVSSPCHRCGQKG---RSWSYRSSCKKCNLHVACVR 177
            C  LP+ +       +IKL         C  C       + W YR +  + ++H+AC  
Sbjct: 122 LCITLPLSISVTHHPHKIKLEFSPPYDFFCDLCNNNKPSYKGWLYRCNICEFDIHIACAV 181

Query: 178 EMI 180
           + I
Sbjct: 182 KNI 184