Miyakogusa Predicted Gene
- Lj0g3v0251009.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0251009.1 Non Characterized Hit- tr|F6HIC2|F6HIC2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.09,1e-18,PPR: pentatricopeptide repeat domain,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; PGR3 (P,CUFF.16442.1
(466 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g052720.1 | organelle transcript processing protein, putat... 427 e-119
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 416 e-116
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 416 e-116
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 415 e-116
Medtr4g113830.1 | organelle transcript processing protein, putat... 412 e-115
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 410 e-114
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 406 e-113
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 405 e-113
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 405 e-113
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 402 e-112
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 402 e-112
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 398 e-111
Medtr5g006420.1 | organelle transcript processing protein, putat... 397 e-110
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 393 e-109
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 392 e-109
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 391 e-109
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 391 e-109
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 391 e-108
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 389 e-108
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 387 e-107
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 386 e-107
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 386 e-107
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 386 e-107
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 384 e-107
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 384 e-107
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 384 e-106
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 382 e-106
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 380 e-105
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 380 e-105
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 380 e-105
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 380 e-105
Medtr1g059720.1 | organelle transcript processing protein, putat... 379 e-105
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 376 e-104
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 376 e-104
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 376 e-104
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 375 e-104
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 374 e-103
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 374 e-103
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 372 e-103
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 372 e-103
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 372 e-103
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 370 e-102
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 370 e-102
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 368 e-102
Medtr3g117150.1 | organelle transcript processing protein, putat... 367 e-101
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 367 e-101
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 365 e-101
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 365 e-101
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 365 e-101
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 365 e-101
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 365 e-101
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 363 e-100
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 362 e-100
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 362 e-100
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 361 1e-99
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 359 3e-99
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 359 3e-99
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 358 7e-99
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 358 7e-99
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 358 8e-99
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 358 8e-99
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 355 5e-98
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 355 6e-98
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 354 8e-98
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 354 9e-98
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 354 1e-97
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 353 2e-97
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 351 1e-96
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 350 1e-96
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 350 2e-96
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 348 9e-96
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 348 9e-96
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 347 1e-95
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 345 6e-95
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 345 6e-95
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 343 2e-94
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 340 1e-93
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 340 2e-93
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 337 1e-92
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 337 2e-92
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 337 2e-92
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 335 5e-92
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 333 3e-91
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 332 7e-91
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 330 2e-90
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 330 2e-90
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 327 2e-89
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 325 6e-89
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 324 1e-88
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 321 8e-88
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 320 1e-87
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 320 3e-87
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 318 1e-86
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 317 1e-86
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 315 4e-86
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 313 2e-85
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 313 2e-85
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 312 5e-85
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 312 5e-85
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 306 2e-83
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 306 4e-83
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 305 7e-83
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 302 5e-82
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 302 6e-82
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 300 2e-81
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 300 2e-81
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 298 1e-80
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 297 2e-80
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 295 1e-79
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 294 1e-79
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 288 8e-78
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 288 1e-77
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 288 1e-77
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 287 2e-77
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 287 2e-77
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 286 3e-77
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 285 1e-76
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 285 1e-76
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 284 1e-76
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 284 2e-76
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 283 2e-76
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 282 5e-76
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 282 5e-76
Medtr6g460480.1 | organelle transcript processing protein, putat... 281 1e-75
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 280 2e-75
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 278 1e-74
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 278 1e-74
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 276 2e-74
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 275 6e-74
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 275 8e-74
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 274 1e-73
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 273 3e-73
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 271 7e-73
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 268 7e-72
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 268 8e-72
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 268 9e-72
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 268 1e-71
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 267 1e-71
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 266 3e-71
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 266 3e-71
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 266 3e-71
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 266 4e-71
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 266 4e-71
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 265 9e-71
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 265 9e-71
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 265 1e-70
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 264 1e-70
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 260 2e-69
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 259 4e-69
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 259 5e-69
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 258 1e-68
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 256 3e-68
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 255 5e-68
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 255 8e-68
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 255 8e-68
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 254 9e-68
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 254 1e-67
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 254 1e-67
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 254 1e-67
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 254 1e-67
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 254 1e-67
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 254 2e-67
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 254 2e-67
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 253 3e-67
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 252 5e-67
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 252 5e-67
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 252 7e-67
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 251 8e-67
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 251 1e-66
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 251 1e-66
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 251 1e-66
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 251 1e-66
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 250 2e-66
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 248 7e-66
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 248 7e-66
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 248 9e-66
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 248 1e-65
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 248 1e-65
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 247 2e-65
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 246 4e-65
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 9e-65
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 244 1e-64
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 243 2e-64
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 8e-64
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 241 8e-64
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 241 9e-64
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 241 1e-63
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 241 1e-63
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 240 2e-63
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 240 2e-63
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 240 2e-63
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 3e-63
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 239 3e-63
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 239 3e-63
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 239 5e-63
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 239 5e-63
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 239 5e-63
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 239 5e-63
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 239 5e-63
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 238 6e-63
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 237 2e-62
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 233 3e-61
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 233 4e-61
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 4e-61
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 232 6e-61
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 232 8e-61
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 231 1e-60
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 229 3e-60
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 229 6e-60
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 228 7e-60
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 228 9e-60
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 228 1e-59
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 227 2e-59
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 226 4e-59
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 226 4e-59
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 226 5e-59
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 224 1e-58
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 223 2e-58
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 223 2e-58
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 223 3e-58
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 3e-58
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 222 5e-58
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 221 8e-58
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 221 2e-57
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 221 2e-57
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 219 4e-57
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 219 6e-57
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 219 6e-57
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 5e-56
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 6e-56
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 216 6e-56
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 215 6e-56
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 214 2e-55
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 214 2e-55
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 213 2e-55
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 213 3e-55
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 210 2e-54
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 209 5e-54
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 208 8e-54
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 208 9e-54
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 2e-53
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 207 2e-53
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 207 3e-53
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 206 3e-53
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 206 5e-53
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 206 6e-53
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 205 8e-53
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 203 3e-52
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 203 4e-52
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 202 4e-52
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 202 6e-52
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 201 2e-51
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 196 3e-50
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 195 7e-50
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 194 2e-49
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 194 2e-49
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 193 4e-49
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 5e-48
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 187 1e-47
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 186 3e-47
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 186 5e-47
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 186 5e-47
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 182 6e-46
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 181 1e-45
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 176 4e-44
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 175 9e-44
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 173 4e-43
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 172 6e-43
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 171 1e-42
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 169 7e-42
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 167 3e-41
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 166 3e-41
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 165 8e-41
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 164 1e-40
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 163 4e-40
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 151 1e-36
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 149 4e-36
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 147 2e-35
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 142 6e-34
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 137 2e-32
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 129 9e-30
Medtr6g024410.1 | DYW nucleic acid deaminase family protein | HC... 116 5e-26
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 115 1e-25
Medtr5g025700.1 | DYW nucleic acid deaminase family protein | LC... 113 3e-25
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 111 2e-24
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 110 4e-24
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 107 2e-23
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 105 8e-23
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 104 2e-22
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 100 3e-21
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 98 2e-20
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 97 4e-20
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 96 5e-20
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 96 8e-20
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 94 4e-19
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 1e-18
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 3e-18
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 3e-18
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 91 3e-18
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 4e-18
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 1e-17
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 87 3e-17
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 9e-17
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 86 9e-17
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 86 1e-16
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 86 1e-16
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 85 2e-16
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 2e-16
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 2e-16
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 84 3e-16
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 84 3e-16
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 4e-16
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 5e-16
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 6e-16
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 83 6e-16
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 83 6e-16
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 9e-16
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 82 1e-15
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 2e-15
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-15
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 80 3e-15
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 80 5e-15
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 5e-15
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 80 6e-15
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 6e-15
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 80 6e-15
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 79 7e-15
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 79 7e-15
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 79 8e-15
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 79 9e-15
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 9e-15
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 79 1e-14
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 79 1e-14
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 79 1e-14
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 79 1e-14
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 79 1e-14
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 78 2e-14
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 2e-14
Medtr2g064660.1 | DYW nucleic acid deaminase family protein | HC... 78 2e-14
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 2e-14
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 2e-14
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 78 2e-14
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 2e-14
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 77 3e-14
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 77 3e-14
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 77 3e-14
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 4e-14
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 77 4e-14
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 77 5e-14
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 5e-14
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 6e-14
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 76 6e-14
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 6e-14
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 76 6e-14
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 6e-14
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 76 7e-14
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 76 8e-14
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 76 9e-14
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 75 2e-13
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 74 2e-13
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 74 3e-13
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 74 3e-13
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 74 3e-13
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 74 3e-13
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 74 3e-13
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 74 4e-13
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 74 4e-13
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 4e-13
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:... 74 4e-13
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 73 5e-13
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 73 5e-13
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 5e-13
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 73 6e-13
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 73 7e-13
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 73 7e-13
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 73 7e-13
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 8e-13
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 9e-13
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 72 1e-12
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 71 2e-12
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 2e-12
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 71 2e-12
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 71 3e-12
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 71 3e-12
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 3e-12
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 70 4e-12
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 4e-12
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 70 5e-12
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831... 70 5e-12
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 70 6e-12
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 70 6e-12
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 70 6e-12
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 6e-12
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 70 6e-12
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:... 70 6e-12
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 7e-12
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 69 8e-12
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 69 1e-11
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 69 1e-11
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 69 1e-11
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 68 2e-11
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 68 2e-11
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 68 2e-11
Medtr5g012260.1 | PPR superfamily protein, putative | HC | chr5:... 67 4e-11
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 67 4e-11
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 67 4e-11
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 67 4e-11
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 67 4e-11
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 4e-11
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 5e-11
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 67 5e-11
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 66 6e-11
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 66 8e-11
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 66 8e-11
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 65 1e-10
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 65 1e-10
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 65 1e-10
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 65 2e-10
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 65 2e-10
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 65 2e-10
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 65 2e-10
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 64 2e-10
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 2e-10
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 2e-10
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 64 3e-10
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 3e-10
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 64 3e-10
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 64 4e-10
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 64 4e-10
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 64 4e-10
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 63 5e-10
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 63 5e-10
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 63 5e-10
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 63 5e-10
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 63 5e-10
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 63 6e-10
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 63 6e-10
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 63 7e-10
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 63 8e-10
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 62 1e-09
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 62 1e-09
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 62 1e-09
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-09
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 62 1e-09
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 62 2e-09
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 62 2e-09
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 61 2e-09
Medtr1g022360.1 | nuclear fusion defective-like protein | HC | c... 61 3e-09
Medtr8g106955.1 | DYW nucleic acid deaminase family protein | HC... 61 3e-09
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 61 3e-09
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 3e-09
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 60 3e-09
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 60 4e-09
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 60 4e-09
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 60 4e-09
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 60 5e-09
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 60 5e-09
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 59 1e-08
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 1e-08
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 59 1e-08
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 59 1e-08
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 59 1e-08
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 59 1e-08
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 59 1e-08
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 59 1e-08
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 58 2e-08
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 58 2e-08
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 58 2e-08
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 2e-08
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 58 2e-08
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 58 3e-08
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 57 3e-08
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 3e-08
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 57 3e-08
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 57 3e-08
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 57 4e-08
Medtr2g007030.1 | PPR containing plant-like protein | HC | chr2:... 57 4e-08
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 57 4e-08
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/460 (45%), Positives = 298/460 (64%), Gaps = 1/460 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+HLY++CGE A+ +F D+ +WN MI+ + GYV A+ LF SM +++V SW
Sbjct: 349 LIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSW 408
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I G A+ G EA+ +F EM+ G +P+E +V+V+ AC + L+ GK +H +
Sbjct: 409 SAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISK 468
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N F NV + L+DMY+KCGC+E VF M E+ V +W+++I+G AM+
Sbjct: 469 NEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNV 528
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + PN +TF+GVL AC H+GLVD+GR + M +++ I P V+HYGC+VDLL
Sbjct: 529 FADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLG 588
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG L+EA E+I +M + P+ WGALLG CR H N + E R L +L +DG++V+
Sbjct: 589 RAGLLKEAEELIESMPMAPDVATWGALLGACRKHHNNEMGERLGRKLIQLQPDHDGFHVL 648
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA G W +V IR +M GV K PGCS I +G+VHEF+AGD+THPQ K I M
Sbjct: 649 LSNIYASKGNWGDVLEIRGIMAQHGVVKMPGCSMIEANGIVHEFLAGDKTHPQIKDIEHM 708
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
++ K+K++GY P TS V LD+ D ++KE L+ HSEKLA+ +GLI IRI+K
Sbjct: 709 LNEVAAKLKIEGYAPITSEVSLDI-DEEEKETALFSHSEKLAVAFGLITIPLPAPIRIIK 767
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACT 461
NLR+C DCH KL+S+ +REIVVRDR+RFH FK G+C+
Sbjct: 768 NLRICNDCHTVVKLISKAFDREIVVRDRHRFHHFKHGSCS 807
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 169/390 (43%), Gaps = 72/390 (18%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL Y + G+ A ++DKMP R+ N MI G + AR LF + +++ SW
Sbjct: 217 LLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSW 276
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I + GMCEEAL +F +M +G +EV VV+ + AC L + G+SVH A
Sbjct: 277 SAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAAK 336
Query: 122 NGFLRNVYVCNALIDM-------------------------------YVKCGCLEEGYRV 150
G V + NALI + Y+ CG +E+ ++
Sbjct: 337 IGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKL 396
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F+ M E+ VVSWS+MI G+A H M +G++P+ + V+ AC+H+ +
Sbjct: 397 FDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAAL 456
Query: 211 DKGRAL------------------LTIMRRDYGIV------------PGVEHYGCLVDLL 240
D G+ + L M G V GV + L+ L
Sbjct: 457 DLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGL 516
Query: 241 SRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL---- 293
+ G +E++ V A+M PN + + +LG CR ++ L +E R+ S +
Sbjct: 517 AMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACR---HMGLVDEGRRYFSSMTQEHKI 573
Query: 294 -LNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
N +Y M ++ AG +E + M
Sbjct: 574 EPNVKHYGCMVDLLGRAGLLKEAEELIESM 603
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYG-LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
+F+ + N W +++ L ++AL + + P+ T +L +C
Sbjct: 100 IFNHLHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCTARV 159
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
GK +H GF +VYV N LI++Y CG + ++VF+ +VSW++++
Sbjct: 160 SEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLA 219
Query: 168 GF 169
G+
Sbjct: 220 GY 221
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 416 bits (1069), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 291/445 (65%), Gaps = 3/445 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGA--ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVF 81
+ D+ N +I +G G A +F P+ + +W+++I G + G A+ +F
Sbjct: 157 EEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLF 216
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
EM+ G P+E+T+V+VL ACA LG LE GK V + + ++V +CNALIDM+ KC
Sbjct: 217 REMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKC 276
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G +++ ++F M RT+VSW+S+I G AMH M+ G+ P+ V FIGVL
Sbjct: 277 GNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVL 336
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
ACSH GLVDKGR M R++ IVP VEHYGC+VDLL R G ++EA E + M PN
Sbjct: 337 SACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPN 396
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
+++W ++ C + L E + L K + +++ YV++SN+YA+ +WE+ +++R +
Sbjct: 397 QIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREM 456
Query: 322 MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
M RG+KK PG + I ++ ++EFVAGD++H Q K I+EM +++ ++K GY+P TS V
Sbjct: 457 MDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQV 516
Query: 382 LLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIEN 441
LLD+ D + KE LYRHSEKLA+ + L+NT PG SIRI+KNLRVCEDCH+A K +S++ N
Sbjct: 517 LLDI-DEEDKEDALYRHSEKLAIAFALLNTPPGTSIRIVKNLRVCEDCHSATKFISKVYN 575
Query: 442 REIVVRDRNRFHCFKDGACTCKDYW 466
REIVVRDRNRFH FK+G C+C+D+W
Sbjct: 576 REIVVRDRNRFHHFKNGLCSCRDFW 600
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVK 140
+ M + G PN+ T VL CA +G L GK VH GF +V+V N LI MY
Sbjct: 113 YRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVHGCVVKFGFEEDVHVLNTLIHMY-- 170
Query: 141 CGCLEEGY----RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
C E+G+ +VF+ + V+WS+MI GF M +G+ P+ +T
Sbjct: 171 CCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEIT 230
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ VL AC+ +G ++ G+ + + + + I VE L+D+ ++ G +++A ++ M
Sbjct: 231 MVSVLSACADLGALELGKWVESYVEKK-NIPKSVELCNALIDMFAKCGNVDKAIKLFRQM 289
Query: 257 SVPPNRVVWGALLGGCRLH 275
V W +++ G +H
Sbjct: 290 D-SRTIVSWTSVIAGLAMH 307
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/466 (45%), Positives = 302/466 (64%), Gaps = 7/466 (1%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP-QRNVRSWTSV 64
YA G+ A +FDKMP++ + ++ M+ G + AR LF M R+V W +
Sbjct: 163 YARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVM 222
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG- 123
I G A+ G E L +F M + KPN +T++ VL +C Q+G LE G+ VH + K NG
Sbjct: 223 IDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIK-NGK 281
Query: 124 ---FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
V V AL+DMY KCG LE+ +VF+ + + VV+W+SMI+G+A++
Sbjct: 282 DGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALK 341
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G++P+YVTFI +L AC H GLV KG + +M+ +Y + P VEH+GC+V+LL
Sbjct: 342 LFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEHFGCMVNLL 401
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAGRL+EA +++ +M + P+ V+WG LL CRLH NI L EE L DL + G YV
Sbjct: 402 GRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNNISLGEEIAEFLLSNDLASSGTYV 461
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA AG W+ +++R LMK GV+K PGCS I ++ VHEF+AGD HP++K I+
Sbjct: 462 LLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSIIEVNNRVHEFIAGDLKHPKSKDIYL 521
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
M E++ +K KGY P T VVL D+ + +QKE+ L HSEKLAL +GLI+T+PG +++I+
Sbjct: 522 MLEEMNSWLKGKGYTPKTDVVLHDIGE-EQKELSLEVHSEKLALAFGLISTRPGTTVKIV 580
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCHA K++S+I R IV+RDRNRFH F +G+C+C D+W
Sbjct: 581 KNLRVCLDCHAVMKMISKITGRRIVMRDRNRFHHFDNGSCSCGDFW 626
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
++G++ + LF+ R+V +WTS+I+ + + ++AL +++M +PN T +
Sbjct: 68 SLGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSS 127
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
+L ++ KS+H G + YV L+D Y + G ++F+ M E++
Sbjct: 128 LLNGST----IQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKS 183
Query: 159 VVS--------------------------------WSSMIVGFAMHXXXXXXXXXXXXMI 186
++S W+ MI G+A + M+
Sbjct: 184 LISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRML 243
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR--RDYGIVPGVEHYGCLVDLLSRAG 244
+KPN +T + VL +C VG ++ GR + + ++ +D + V LVD+ + G
Sbjct: 244 VEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCG 303
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
LE+AR+V + + V W +++ G ++ L+EEA++
Sbjct: 304 SLEDARKVFDKID-GKDVVAWNSMIMGYAVNG---LSEEALK 341
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 285/452 (63%), Gaps = 1/452 (0%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
AR +F+ MP R+I++WN MI +G + AR F MPQR+ SW ++I G A+ G
Sbjct: 316 ARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHY 375
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
EEAL +F E+++DG N T L CA + LE GK +H A G+ +V NAL
Sbjct: 376 EEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNAL 435
Query: 135 IDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
+ MY KCG ++E FEG+ E+ VVSW++M+ G+A H M G+KP+
Sbjct: 436 LAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDE 495
Query: 195 VTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
+T +GVL ACSH GL+D+G M +DYG++P +HY C++DLL RAGRLEEA+++I
Sbjct: 496 ITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Query: 255 NMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEE 314
NM P WGALLG R+H N L E+A + K++ N G YV++SN+YA +G+W +
Sbjct: 556 NMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVD 615
Query: 315 VSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 374
++R M+ GV+K PG S + + +H F GD +HP+ + I+ E+L +KM+ +GY
Sbjct: 616 ADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGY 675
Query: 375 IPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFK 434
+ T +VL D+E+ ++KE L HSEKLA+ +G++ G IR+MKNLRVCEDCH+A K
Sbjct: 676 VSLTKLVLHDVEE-EEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIK 734
Query: 435 LVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+S+I R I++RD +RFH F +G C+C DYW
Sbjct: 735 HISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 154/344 (44%), Gaps = 25/344 (7%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
AR +FD+MP+RD+ +WN+M+ + +G AR LF MP+++V SW S++ G A+ G
Sbjct: 99 ARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYV 158
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
+EA +VF M + N ++ +L A G +E ++ F + + ++ N L
Sbjct: 159 DEAREVFDNM----PEKNSISWNGLLAAYVHNGRIE--EACLLFESKSDW--DLISWNCL 210
Query: 135 IDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
+ +V+ L + +F+ M R +SW++MI G+A + +
Sbjct: 211 MGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQ----GGGLSQARRLFDESPTRDV 266
Query: 195 VTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
T+ ++ G++D+ + M + Y ++ + +++ ARE+
Sbjct: 267 FTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEV-----SYNAMIAGYVQTKKMDIARELFE 321
Query: 255 NMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEE 314
+M N W ++ G +I A + + + D ++ + + YA++G +EE
Sbjct: 322 SMPC-RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVS---WAAIIAGYAQSGHYEE 377
Query: 315 VSRIRRLMKSRGV---KKTPGCSSITIDGVVHEFVAGDETHPQA 355
+ +K G + T GC+ T + G + H QA
Sbjct: 378 ALNMFVEIKQDGESLNRATFGCALSTCADIA-ALELGKQIHGQA 420
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 122/306 (39%), Gaps = 43/306 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM-------- 53
LL Y G A L+F+ D+ +WN ++ + +G AR LF M
Sbjct: 179 LLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISW 238
Query: 54 -----------------------PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
P R+V +WT+++ G + GM +EA F EM +
Sbjct: 239 NTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PE 294
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
NEV+ A++ Q ++ + + RN+ N +I Y + G + + +
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMP----CRNISSWNTMITGYGQIGDIAQARKF 350
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F+ M +R VSW+++I G+A + + G N TF L C+ + +
Sbjct: 351 FDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAAL 410
Query: 211 DKGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ G+ + ++ YG G L+ + + G ++EA + + + V W +L
Sbjct: 411 ELGKQIHGQAVKMGYGT--GCFVGNALLAMYFKCGSIDEANDTFEGIE-EKDVVSWNTML 467
Query: 270 GGCRLH 275
G H
Sbjct: 468 AGYARH 473
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 27/296 (9%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G A +F+ MP+R ++N MI+ + AR+LF MP+R++ SW ++ G
Sbjct: 63 GHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYV 122
Query: 70 KCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
+ +A ++F M EKD V+ ++L AQ G ++ + V N +N
Sbjct: 123 RNCRLGDARRLFDLMPEKD-----VVSWNSLLSGYAQNGYVDEAREVF----DNMPEKNS 173
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IR 187
N L+ YV G +EE +FE + ++SW+ ++ GF M +R
Sbjct: 174 ISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR 233
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
+ +++ ++ + G + + R L D V + +V + G L+
Sbjct: 234 -----DAISWNTMISGYAQGGGLSQARRLF-----DESPTRDVFTWTAMVSGYVQNGMLD 283
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM-----RHLSKLDLLNDGY 298
EA+ M N V + A++ G K + +A E R++S + + GY
Sbjct: 284 EAKTFFDEMP-EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGY 338
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 105/242 (43%), Gaps = 26/242 (10%)
Query: 38 INVGYVGAARDLFSSMPQRN--------VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS 89
IN G+ + S+ N + W I + G C+ AL VF+ M
Sbjct: 21 INFGHTSTSTRRSESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTM----- 75
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
P +V + L + +F + + F + R+++ N ++ YV+ L + R
Sbjct: 76 -PRRSSVSYNAMISGYLRNSKFNLARNLFDQMPE--RDLFSWNVMLTGYVRNCRLGDARR 132
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+F+ M E+ VVSW+S++ G+A + M + N +++ G+L A H G
Sbjct: 133 LFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGR 188
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+++ LL + D+ ++ + CL+ R +L +AR + M V + + W ++
Sbjct: 189 IEEA-CLLFESKSDWDLIS----WNCLMGGFVRKKKLGDARWLFDKMPV-RDAISWNTMI 242
Query: 270 GG 271
G
Sbjct: 243 SG 244
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/471 (43%), Positives = 296/471 (62%), Gaps = 14/471 (2%)
Query: 7 ASCGETRHARL-------MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
++CG TR L + D ++ N +I G AR+LF + +++V
Sbjct: 271 SACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVI 330
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SW ++I G + + EEAL +F M + KPN+VT + +L ACA LG L+ GK VH +
Sbjct: 331 SWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYI 390
Query: 120 KGNGFLRN---VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
N LRN + +LIDMY KCGC+E RVF M R + SW++M+ GFAMH
Sbjct: 391 DKN--LRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAE 448
Query: 177 XXXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M+ G+ +P+ +TF+GVL AC+ GLVD G M +DYGI P ++HYGC
Sbjct: 449 RALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGC 508
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
++DLL+RA + EEA ++ NM + P+ +WG+LL C+ H + E L +L+ N
Sbjct: 509 MIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPEN 568
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
G +V++SN+YA AG+W++V+RIR + +G+KK PGC+SI IDG VHEF+ GD+ HP+
Sbjct: 569 AGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPEC 628
Query: 356 KGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGM 415
I++M ++ ++ G++P+TS VL D+ D + KE L +HSEKLA+ +GLI TKPG
Sbjct: 629 NNIYKMLNEVDKLLEENGFVPNTSEVLYDM-DEEWKEGALSQHSEKLAISFGLIKTKPGT 687
Query: 416 SIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+IRI+KNLRVC +CH+A KL+S+I NREI+ RDRNRFH FKDG C+C D W
Sbjct: 688 TIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 6/298 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++H+YAS GE ARL+FDK RD ++ +I ++ G + AR LF +P ++V SW
Sbjct: 172 VIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSW 231
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + G EEA+ F EM++ PN+ T+V VL AC E GK + + +
Sbjct: 232 NAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRD 291
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NGF N+ + NALIDMY KCG + +F+G+ E+ V+SW++MI G++
Sbjct: 292 NGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALAL 351
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+R +KPN VTF+G+LHAC+ +G +D G+ + + ++ + L+D+ +
Sbjct: 352 FEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYA 411
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
+ G +E A V +M N W A+L G +H + AE A+ S +++N G +
Sbjct: 412 KCGCIEAAERVFRSMH-SRNLASWNAMLSGFAMHGH---AERALALFS--EMVNKGLF 463
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 410 bits (1055), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/468 (43%), Positives = 300/468 (64%), Gaps = 4/468 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++H+Y G AR +FD+MP RD+ TW +I G + +A +LF +P +++ +W
Sbjct: 150 IIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAW 209
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS++ G ++ M ++AL+ F +M + G +E+T+V + ACAQLG + + A+
Sbjct: 210 TSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAES 269
Query: 122 NGFLR--NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ F NV+V +ALIDMY KCG +EE Y VF+GM+E V S+SSMIVGFA+H
Sbjct: 270 SRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAI 329
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+ G+KPN+VTF+G+ ACSH G+V++G+ L M+ YG+ P +HY C+ DL
Sbjct: 330 KLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADL 389
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAG LE+A +++ M + PN VWGALLG +H N +AE A R L +L+ N G Y
Sbjct: 390 LGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNY 449
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI-DGVVHEFVAGDETHPQAKGI 358
+++S YA A KW++VSR+R+LM+ + ++K PGCS + +G++HEF AGD HP+ I
Sbjct: 450 LLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEI 509
Query: 359 FEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIR 418
+ + LL ++K GY P + V D++D + K L HSEKLAL YGL++T G +I+
Sbjct: 510 KKALDDLLQRLKCTGYQPKLNSVPYDIDD-EGKRCLLVSHSEKLALAYGLLSTDAGSTIK 568
Query: 419 IMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IMKNLR+CEDCH S++ R+I+VRD RFH F +GAC+C ++W
Sbjct: 569 IMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 113/277 (40%), Gaps = 37/277 (13%)
Query: 14 HARLMFDKMPQRDIATWNIM--IAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKC 71
HA + + + Q N++ I L ++ LFS + N ++++I A+
Sbjct: 31 HAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPFLYSALIRAYARN 90
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G ++++++ M + P T A+ + L + G +H A GF+ ++YV
Sbjct: 91 GPFHHSIRLYTSMLNNNVSPVSFTFSALF---SLLKNPSLGSQLHLHAFLFGFVNDLYVG 147
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVS------------------------------ 161
N +I MYVK G L+ +VF+ M R VV+
Sbjct: 148 NTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMV 207
Query: 162 -WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
W+SM+ G++ + M G+ + +T +G + AC+ +G+ + I
Sbjct: 208 AWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIA 267
Query: 221 RRD-YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+G V L+D+ S+ G +EEA V M
Sbjct: 268 ESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGM 304
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/468 (43%), Positives = 287/468 (61%), Gaps = 5/468 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRN 57
LL +Y CG +FD++ Q +I + N + L G V A D+F + N
Sbjct: 140 LLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELN 199
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V +WTS+I + G EAL++F +M+ DG +PN VT+ +++ AC + L GK +H
Sbjct: 200 VVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHC 259
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
F+ G +VYV +ALIDMY CG + F+ M R +VSW+S++ G+AMH
Sbjct: 260 FSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKE 319
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M++ G KP+ +TF VL AC+ GL ++G M ++Y + P +EHY C+V
Sbjct: 320 TIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMV 379
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
LLSR G+LEEA +I M P+ VWGALL CR+H N+ L E A L L+ N G
Sbjct: 380 TLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNPG 439
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
Y+++SN+YA G W+E +R+R +MKS+G++K PGCS I I VH V+GD++HPQ K
Sbjct: 440 NYILLSNIYASKGMWDEENRVRDMMKSKGLQKNPGCSWIEIGHRVHTLVSGDKSHPQMKE 499
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI 417
I E EKL +++K G +P T VL D+E+ + KE L HSEKLA+V GLINT PG +
Sbjct: 500 ILEKSEKLSIEIKESGCLPMTKSVLQDVEE-QDKEQILCGHSEKLAVVLGLINTSPGQPL 558
Query: 418 RIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
+++KNLR+C+DCHA K++S +E REI VRD NRFH FK+G C+C D+
Sbjct: 559 QVIKNLRICDDCHAVIKVISRLEGREIFVRDTNRFHHFKEGVCSCADF 606
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 41/313 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----N 57
L+H+Y C A+ +FD M RD+ W+ MIA +G V A+++F M + N
Sbjct: 4 LVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPN 63
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ SW +I G G+ +EA+++F EM +G P+ TV VL L D+ GK VH
Sbjct: 64 LVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHG 123
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE------------------------- 152
+ G + YV +AL+DMY +CGC E RVF+
Sbjct: 124 YVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDT 183
Query: 153 ----------GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
G E VV+W+S+I + M G++PN VT ++
Sbjct: 184 ALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTIPSLIP 243
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
AC ++ + G+ + R GI V L+D+ + GR+ ++ M N
Sbjct: 244 ACGNISALTHGKEIHCFSLRK-GIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPF-RNL 301
Query: 263 VVWGALLGGCRLH 275
V W +++ G +H
Sbjct: 302 VSWNSIMSGYAMH 314
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
++L+ MY+KC +++ ++F+GM +R V+ WS+MI G++ M + G++
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
PN V++ G++ +VGL D+ L M + G +P C +L G LE+
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSE-GFLPDGSTVSC---VLPGVGNLED--- 114
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV-VMSNVYAEAG 310
+L G ++H ++ KL L +D Y V + ++Y G
Sbjct: 115 ----------------VLMGKQVHGYVI----------KLGLESDKYVVSALLDMYGRCG 148
Query: 311 KWEEVSRI 318
E+SR+
Sbjct: 149 CAPEMSRV 156
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/441 (45%), Positives = 288/441 (65%), Gaps = 2/441 (0%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
+A N ++ G + +R +F M + +V SW S+I A+ G+ EA +FS+M K
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK 292
Query: 87 DGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G + N VT+ AVL+ACA G L+ GK +H N+ V +++DMY KCG +E
Sbjct: 293 RGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVE 352
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ F+ ++ + V SW+ M+ G+ MH MIR G+KPNY+TF+ VL ACS
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GL+ +G M+ ++ + PG+EHY C+VDLL RAG L+EA +I M V P+ +VW
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVW 472
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
G+LLG CR+HKN+ L E + R L KLD N GYYV++SN+YA+AG+W++V R+R LMK+
Sbjct: 473 GSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNH 532
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G+ KTPG S + G VH F+ GD+ HPQ + I+E ++L VK++ GY+P+ + VL D+
Sbjct: 533 GLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDV 592
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
D ++K + L HSEKLA+ +G++N+ PG I+I+KNLR+C DCH A KL+S+I NREIV
Sbjct: 593 -DVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIV 651
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
+RD RFH FKDG C+C DYW
Sbjct: 652 IRDSKRFHHFKDGLCSCGDYW 672
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 23/297 (7%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
LY C + + F DI + +I GY+ AR LF +P+RNV SWTS+
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 65 IYGLAKCGMCEEALKVFSEM----EKDGSK-------PNEVTVVAVLVACAQLGDLEFGK 113
I G + EA+ +F E E D + + V + V+ ACA++ +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
VH A GF + V N L+D Y KCG + +VF+GM E V SW+S+I +A +
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 174 XXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRAL---LTIMRRDYGIVPG 229
M++ G ++ N VT VL AC+H G + G+ + + M + +V G
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
+VD+ + GR+E AR+ + N W ++ G +H + +EAM+
Sbjct: 339 TS----IVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHGH---GKEAMK 387
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 47 RDLFSS-MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
R +F + + +V SW S+I A+ G +AL FS M K PN T + +C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L DL GK +H+ A G+ +++V +ALIDMY KCG L + ++F+ + ER VVSW+SM
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 166 IVGFAMH 172
I G+ +
Sbjct: 159 ISGYVQN 165
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 405 bits (1040), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/441 (45%), Positives = 288/441 (65%), Gaps = 2/441 (0%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
+A N ++ G + +R +F M + +V SW S+I A+ G+ EA +FS+M K
Sbjct: 233 LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVK 292
Query: 87 DGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G + N VT+ AVL+ACA G L+ GK +H N+ V +++DMY KCG +E
Sbjct: 293 RGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVE 352
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ F+ ++ + V SW+ M+ G+ MH MIR G+KPNY+TF+ VL ACS
Sbjct: 353 MARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACS 412
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GL+ +G M+ ++ + PG+EHY C+VDLL RAG L+EA +I M V P+ +VW
Sbjct: 413 HAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVW 472
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
G+LLG CR+HKN+ L E + R L KLD N GYYV++SN+YA+AG+W++V R+R LMK+
Sbjct: 473 GSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNH 532
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G+ KTPG S + G VH F+ GD+ HPQ + I+E ++L VK++ GY+P+ + VL D+
Sbjct: 533 GLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSVLYDV 592
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
D ++K + L HSEKLA+ +G++N+ PG I+I+KNLR+C DCH A KL+S+I NREIV
Sbjct: 593 -DVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCHFAIKLISKIVNREIV 651
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
+RD RFH FKDG C+C DYW
Sbjct: 652 IRDSKRFHHFKDGLCSCGDYW 672
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 23/297 (7%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
LY C + + F DI + +I GY+ AR LF +P+RNV SWTS+
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 65 IYGLAKCGMCEEALKVFSEM----EKDGSK-------PNEVTVVAVLVACAQLGDLEFGK 113
I G + EA+ +F E E D + + V + V+ ACA++ +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
VH A GF + V N L+D Y KCG + +VF+GM E V SW+S+I +A +
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 174 XXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRAL---LTIMRRDYGIVPG 229
M++ G ++ N VT VL AC+H G + G+ + + M + +V G
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
+VD+ + GR+E AR+ + N W ++ G +H + +EAM+
Sbjct: 339 TS----IVDMYCKCGRVEMARKAFDRLK-RKNVKSWTVMVAGYGMHGH---GKEAMK 387
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Query: 47 RDLFSS-MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
R +F + + +V SW S+I A+ G +AL FS M K PN T + +C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L DL GK +H+ A G+ +++V +ALIDMY KCG L + ++F+ + ER VVSW+SM
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 166 IVGFAMH 172
I G+ +
Sbjct: 159 ISGYVQN 165
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/465 (42%), Positives = 284/465 (61%), Gaps = 1/465 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y AR +FDKMP RDI +WN +++ +N + A +FS MP+RNV +W
Sbjct: 332 LITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTW 391
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T +I GLA+ G EE LK+F++M+ +G +P + + AC+ LG L+ G+ +H
Sbjct: 392 TVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIR 451
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G + NALI MY +CG +E VF M VSW++MI A H
Sbjct: 452 LGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIEL 511
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M++ + P+ +TF+ +L AC+H GL+ +GR M YGI PG +HY L+DLL
Sbjct: 512 FEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLC 571
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG +A+ VI +M +W ALL GCR+H N+ L +A L +L DG Y++
Sbjct: 572 RAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYII 631
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA G+W+EV+R+R LM+ RGVKK PGCS + ++ +VH F+ D HP+ + ++
Sbjct: 632 LSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTY 691
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
++L+ +MK GY+PDT VL D+E ++ KE L HSEKLA+VYG++ G +IR+ K
Sbjct: 692 LQQLVNEMKKLGYVPDTKFVLHDME-SEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFK 750
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLR+C DCH AFK +S++ REIVVRDR RFH FK+G C+C +YW
Sbjct: 751 NLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 137/326 (42%), Gaps = 49/326 (15%)
Query: 15 ARLMFDKMPQRDI--ATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
AR +FD+ P+ I +W MIA + + AAR+L + +W ++I G + G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACA----QLGDLEFGKSVHRF---------- 118
+ EEA F M G + +E T +++ AC ++G G+ VH +
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322
Query: 119 ----AKGNGFL---------------------RNVYVCNALIDMYVKCGCLEEGYRVFEG 153
+ N + R++ NA++ YV +EE +F
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSE 382
Query: 154 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
M ER V++W+ MI G A + M G++P F G + ACS +G +D G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442
Query: 214 RALLTIMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ + + + R D G+ G L+ + SR G +E A V M + V W A++
Sbjct: 443 QQIHSQVIRLGHDSGLSAG----NALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIA 497
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLND 296
H + V A E + K D+L D
Sbjct: 498 ALAQHGHGVKAIELFEQMMKEDILPD 523
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 167/409 (40%), Gaps = 62/409 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ--RNVR 59
L+++Y +AR +FDK+P+ DI +++ + G V A+ LF++ P R+
Sbjct: 46 LINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTV 105
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE-FGKSVHRF 118
S+ ++I + AL +F +M++ G P+ T +VL A + + D E + +H
Sbjct: 106 SYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCE 165
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGC---------LEEGYRVF------------------ 151
G L V NAL+ YV C + +VF
Sbjct: 166 VIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIA 225
Query: 152 ---------------EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
+G+ V+W++MI G+ M +G++ + T
Sbjct: 226 GYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYT 285
Query: 197 FIGVLHAC----SHVGLVDKGRA-----LLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
+ ++ AC +G+ + GR L T++ + V V + L+ ++ R+
Sbjct: 286 YTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNN--ALITFYTKYDRMI 343
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYA 307
EAR V M V + + W A+L G + N EEA S++ N + VM + A
Sbjct: 344 EARRVFDKMPV-RDIISWNAVLSG---YVNAQRIEEANSIFSEMPERNVLTWTVMISGLA 399
Query: 308 EAGKWEEVSRIRRLMKSRGVKKT--PGCSSITIDGVVHEFVAGDETHPQ 354
+ G EE ++ MKS G++ +IT V+ G + H Q
Sbjct: 400 QNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQ 448
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/465 (43%), Positives = 287/465 (61%), Gaps = 32/465 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLH+YA+CG+T A +F+ M +RD+ +W
Sbjct: 181 LLHIYAACGDTESAYKVFELMGERDLV-------------------------------AW 209
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
SVI G A G EAL +F EM G +P+ TVV++ ACA+LG LE G+ VH +
Sbjct: 210 NSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLK 269
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G N++V N+L+D Y KCG + E +VF M ER VVSW+S++VG A++
Sbjct: 270 VGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGL 329
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M R + P +TF+GVL+ACSH G++D+G M+ +YGI P +EHYGC+VDLLS
Sbjct: 330 FKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLS 389
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG ++ A E I +M + PN V+W LLG C +H ++ L E A HL KL+ + G YV+
Sbjct: 390 RAGLVKRAYEYIQSMPMQPNAVIWRTLLGACTVHGDLSLGEIARSHLLKLEPKHSGDYVL 449
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA +W +V +RR M GV KTPG S + + V EF GD +HP+++ ++ +
Sbjct: 450 LSNLYASERRWSDVQTVRRSMIEDGVWKTPGYSLVELGNRVFEFTMGDRSHPRSQDVYAL 509
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
EK+ +K++GY+P T+ VL D+E+ ++KE L HSEK+A+ + L+NT PG IR++K
Sbjct: 510 LEKITELLKLEGYVPHTANVLADIEE-EEKEQALSYHSEKVAIAFMLLNTAPGTPIRVIK 568
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLRVC DCH A KL+S++ REI++RDR+RFH F G+C+CKDYW
Sbjct: 569 NLRVCADCHMAIKLISKVYAREIIIRDRSRFHHFSGGSCSCKDYW 613
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 125/240 (52%), Gaps = 5/240 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A ++F+ + NV +W ++I G A+ AL ++ +M +P+ T +L A ++
Sbjct: 93 AHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISK 152
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
++ G+ +H NGF ++V N+L+ +Y CG E Y+VFE M ER +V+W+S+
Sbjct: 153 SLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSV 212
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GFA++ M G++P+ T + + AC+ +G ++ GR + + + G
Sbjct: 213 INGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLK-VG 271
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ + L+D ++ G + EA++V + MS N V W +L+ G ++ EEA+
Sbjct: 272 LTGNLHVNNSLLDFYAKCGSIREAQQVFSEMS-ERNVVSWTSLVVGLAVNG---FGEEAL 327
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 191/424 (45%), Positives = 266/424 (62%), Gaps = 1/424 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ AR LF P++ V +W ++I G + G E A+ +F EM K PN VT+ +L A
Sbjct: 361 IDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSA 420
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CAQLG L FGK VH K N+YV AL+DMY KCG + E +++F+ M E+ V+W
Sbjct: 421 CAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTW 480
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
++MI G+ +H M+ +G P+ VTF+ VL+ACSH GLV +G + M
Sbjct: 481 NTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVN 540
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
Y I P +EHY C+VD+L R+G+LE+A E I M V P VWG LLG C +HK+ +A
Sbjct: 541 KYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIAR 600
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
A L +LD + GYYV++SN+Y+ + + + IR+++K R + K+PGC+ I ++G
Sbjct: 601 LASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTP 660
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKL 402
H FV+GD +H A I+ EKL KM+ GY +T L D+E+ ++KE+ + HSEKL
Sbjct: 661 HVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEE-EEKELAVNVHSEKL 719
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A+ +GLI T+PG IRI+KNLRVC DCH A K +S+I R IVVRD NRFH FKDG C+C
Sbjct: 720 AIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSC 779
Query: 463 KDYW 466
DYW
Sbjct: 780 GDYW 783
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V AR LF + + ++ ++ ++I G G E ++K+F E+ G + + T+V ++
Sbjct: 258 GDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLI 317
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+ G L S+H F +G + N V A +Y K ++ +F+ E+TVV
Sbjct: 318 PLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVV 377
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W++MI G+ + M++ PN VT +L AC+ +G + G+ + ++
Sbjct: 378 AWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLI 437
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ + + P + LVD+ ++ G + EA ++ +MS N V W ++ G LH
Sbjct: 438 KSE-NLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNTMIFGYGLH 490
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 130/295 (44%), Gaps = 3/295 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F MP+R+ W ++I GL K ++++++F EM DG + + TV AVL A A+
Sbjct: 162 ARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAE 221
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L +L+ G + A GF YV LI +Y KCG + +F + ++++++M
Sbjct: 222 LQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAM 281
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GF + ++ G + + T +G++ S G + ++ + G
Sbjct: 282 ISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKS-G 340
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
I+ + ++ ++ AR + + S V W A++ G + + A
Sbjct: 341 IILNPTVSTAFTAIYNKLNEIDLARHLF-DESPEKTVVAWNAMISGYTQNGSTETAISLF 399
Query: 286 RHLSKLDLLNDGYYV-VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
+ + K + + + + + A+ G + L+KS ++ S+ +D
Sbjct: 400 KEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVD 454
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 121/260 (46%), Gaps = 9/260 (3%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
HA+ + + + D+AT + L + AR LF S+P+ ++ + ++ G +
Sbjct: 32 HAQFILNGY-RFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDS 90
Query: 74 CEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCN 132
++ +++ + ++ + P+ T + AC+ L +H + +G+ NV+V +
Sbjct: 91 PSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVGS 147
Query: 133 ALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP 192
AL+D+Y K + +VF+GM ER V W++MI G + M+ G++
Sbjct: 148 ALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRV 207
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTI-MRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
+ T VL A + + + G + + ++ +G V L+ L S+ G + AR
Sbjct: 208 DSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV--LTGLISLYSKCGDVNTARL 265
Query: 252 VIANMSVPPNRVVWGALLGG 271
+ ++ P+ + + A++ G
Sbjct: 266 LFRRIN-RPDLIAYNAMISG 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF SM ++N +W ++I+G G EALK+++EM G P+ VT ++VL
Sbjct: 460 GNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVL 519
Query: 101 VACAQLGDLEFGKSV-HRFAKGNGF--LRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-E 156
AC+ G + G+ + H L Y C ++D+ + G LE+ + M E
Sbjct: 520 YACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYAC--MVDILGRSGQLEKALEFIKKMPVE 577
Query: 157 RTVVSWSSMIVGFAMH 172
W +++ +H
Sbjct: 578 PGPAVWGTLLGACMIH 593
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/465 (42%), Positives = 292/465 (62%), Gaps = 1/465 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++YA+CG AR ++D + + + M++ +G V AR +F M +R++ W
Sbjct: 263 LINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCW 322
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I G A+ +EALK+F EM + S P+++T+++V+ AC+ +G L +H +
Sbjct: 323 SAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDR 382
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+GF R + V NALIDMY KCG L + VFE M + V+SWSSMI FAMH
Sbjct: 383 SGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKL 442
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M V ++PN VTFIGVL+AC H GLV++G L + M ++GI P EHYGC+VDL
Sbjct: 443 FRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYC 502
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RA L +A E+I M PN ++WG+L+ C++H L E A + L +L+ +DG VV
Sbjct: 503 RANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVV 562
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA+ +W +V IR+ M +G+ K S I I+ VH F+ D H Q+ I+E
Sbjct: 563 LSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEK 622
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
++++ K+K+ GY P TS +L+DLE+ +KE+ L+ HSEKLA+ YGLI+ + IRI+K
Sbjct: 623 LDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLW-HSEKLAVCYGLISRRNESCIRIVK 681
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLR+CEDCH+ KLVS++ EIVVRDR RFH G C+C+DYW
Sbjct: 682 NLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 145/327 (44%), Gaps = 64/327 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YASC ARL+FDKM D WN+
Sbjct: 162 LIAMYASCRRIMDARLLFDKMCHPDAVAWNM----------------------------- 192
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I G + G ++AL++F +M KP+ V + VL AC G+L +G+++H F K
Sbjct: 193 --IIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKD 250
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG---------------------------- 153
NG+ + ++ ALI+MY CG ++ ++++G
Sbjct: 251 NGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFI 310
Query: 154 ---MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
M ER +V WS+MI G+A M++ P+ +T + V+ ACSHVG +
Sbjct: 311 FDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGAL 370
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ + T + R G + L+D+ ++ G L +AREV NM N + W +++
Sbjct: 371 AQANWIHTYVDRS-GFGRALSVNNALIDMYAKCGNLVKAREVFENMP-RKNVISWSSMIN 428
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDG 297
+H N A + R + ++++ +G
Sbjct: 429 AFAMHGNADSAIKLFRRMKEVNIEPNG 455
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 98/224 (43%), Gaps = 3/224 (1%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLG 107
+FS +P + ++ L++ E+ + ++ + + + + ++L A +++
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
G +H A GF+ + ++ LI MY C + + +F+ M V+W+ +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
G+ + M MKP+ V VL AC H G + GR + + +D G
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFV-KDNGYA 254
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+++ + G ++ AR++ +S + +V A+L G
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLS-SKHLIVSTAMLSG 297
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/466 (41%), Positives = 291/466 (62%), Gaps = 2/466 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ ++ G AR +FD RD +WN MI + G + A++LF M +R+V SW
Sbjct: 152 LIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSW 211
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I G + G EAL F +M + KPNE T+V+ L AC+ L L+ GK +H + +
Sbjct: 212 STIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRR 271
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVF-EGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ N + +LIDMY KCG ++ VF E +R V W++MI GFAMH
Sbjct: 272 DNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAIN 331
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M + PN VTFI +L+ACSH +V +G++ +M DYGI P +EHYGC+VDLL
Sbjct: 332 VFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLL 391
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
SR+G L+++ E+I +M + P+ +WGALL CR++K++ R + ++D + G V
Sbjct: 392 SRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNV 451
Query: 301 VMSNVYAEAGKWEEVSRIRRLMK-SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
++ N+Y+ +G+W E +R + + KK PG SSI ++GV HEF+ GD +HPQ++ I+
Sbjct: 452 LLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIY 511
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRI 419
++++ K+K+ GY+P+ VLLD +D + KE L HSEKLA+ +GL+NT PG IRI
Sbjct: 512 SFLDEMISKLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPIRI 571
Query: 420 MKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
+KNLRVC DCH A K +S++ +R I+VRDR R+H FKDG C+CKDY
Sbjct: 572 VKNLRVCGDCHQATKFISKVYDRVIIVRDRMRYHHFKDGICSCKDY 617
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 24/291 (8%)
Query: 14 HARLMFDKMPQRDIATWNIMI-AHLINVGYVGAARDLFSSM-------PQRNVRSWTSVI 65
+A +FD++PQ D+ +N MI +H ++ + +F S+ P R S +
Sbjct: 61 YAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNR-----YSFV 115
Query: 66 YGLAKC--GMC-EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
+ C GMC E +VF+ K G N V A++ + G +E ++V A
Sbjct: 116 FAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVD- 174
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
R+ Y N +I YV G + +F+ M ER VVSWS++I G+
Sbjct: 175 ---RDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFF 231
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M++ +KPN T + L ACS++ +D+G+ + +RRD I L+D+ ++
Sbjct: 232 HKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAK 290
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
G ++ A V V W A++GG +H EEA+ K+ +
Sbjct: 291 CGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGK---PEEAINVFEKMKV 338
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/461 (41%), Positives = 277/461 (60%), Gaps = 1/461 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y +CG+ A F P + + TW MI + G VG A LF + + + +W ++I
Sbjct: 175 YVACGDLDAAVECFYAAPMKSVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMI 234
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G G E LK+F M + G KPN +++ +VL+ C+ L L+ GK VH+ +
Sbjct: 235 AGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLS 294
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
R+ +LI MY KCG L++ + +F + + VV+W++MI G+A H M
Sbjct: 295 RDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEM 354
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
+ +KP+++TF+ VL AC+H G+VD G M +++GI EHYGC+VDLL RAGR
Sbjct: 355 KKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGR 414
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
L EA +++ +M P+ ++G LLG CR+HK++ +AE A ++L +LD + YV ++NV
Sbjct: 415 LSEAVDMVKSMPFKPHPAIFGTLLGACRIHKSMHMAEFAAKNLLELDPTSATGYVQLANV 474
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
YA KWE V+R+R+ MK V K PG S I I+ VHEF + D HP+ I E +KL
Sbjct: 475 YAAQSKWEHVARVRKSMKENNVVKPPGYSWIEINNAVHEFRSNDRLHPELVSIHEKLDKL 534
Query: 366 LVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRV 425
KMK+ GY+PD L D+ + + KE L RHSEKLA+ +GL+ G+ IR+ KNLRV
Sbjct: 535 ETKMKLAGYVPDLEFALHDVGE-ELKEQLLLRHSEKLAIAFGLLKVPLGVPIRVFKNLRV 593
Query: 426 CEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
C DCH+A K +S IE REI+VRD RFH FKDG C+C DYW
Sbjct: 594 CGDCHSAIKYISAIEGREIIVRDTTRFHHFKDGLCSCSDYW 634
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 129/272 (47%), Gaps = 22/272 (8%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G AR +FDK+P+ + ++N M+A ++ + ARD F MP R+ SW +++ G A
Sbjct: 86 GNFERARQLFDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRDTASWNTMLSGYA 145
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ M +EA ++ M + N VT A++ GDL+ A +++V
Sbjct: 146 QVRMMDEARRLLVAMPEK----NCVTWSAMVSGYVACGDLDAAVECFYAAP----MKSVI 197
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
A+I Y+K G + +F + +T+V+W++MI G+ + M+ G
Sbjct: 198 TWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETG 257
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTI-----MRRDYGIVPGVEHYGCLVDLLSRAG 244
+KPN ++ VL CS + + G+ + + + RD V L+ + S+ G
Sbjct: 258 VKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTS------LISMYSKCG 311
Query: 245 RLEEAREVIANMSVPPNRVV-WGALLGGCRLH 275
L+++ ++ + +P VV W A++ G H
Sbjct: 312 DLKDSWDLF--VQIPRKDVVTWNAMISGYAQH 341
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 32/154 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ CG+ + + +F ++P++D+ TWN MI+
Sbjct: 303 LISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMIS-------------------------- 336
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAK 120
G A+ G E+AL +F EM+K KP+ +T VAVL+AC G ++ G K + K
Sbjct: 337 -----GYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVK 391
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
G ++D+ + G L E + + M
Sbjct: 392 EFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSM 425
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/505 (40%), Positives = 292/505 (57%), Gaps = 45/505 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLI----------------------- 38
L+ +Y CG AR +FD+M +D+ +WN M+A
Sbjct: 160 LIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPD 219
Query: 39 -----------------NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVF 81
NV YV +F ++ ++N+ SW +I K + +A+ ++
Sbjct: 220 GCTMASLMPAVANTSSENVLYV---EKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLY 276
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+MEK +P+ +T +VL AC L L G+ +H + + N+ + N+LIDMY +C
Sbjct: 277 LQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARC 336
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
GCL++ RVF+ M+ R V SW+S+I + M M+ G P+ + F+ +L
Sbjct: 337 GCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAIL 396
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
ACSH GL+D+GR M DY I P +EHY CLVDLL RAGR++EA +I M + PN
Sbjct: 397 SACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPN 456
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
VW LL CR+ N+ + A +L +L GYYV++SN+YA+AG+W+EV+ IR +
Sbjct: 457 ERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSV 516
Query: 322 MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
MK + ++KTPG S++ ++ VH F+AGD +HPQ+K I+E L+ KMK GY+P+T
Sbjct: 517 MKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSA 576
Query: 382 LLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIEN 441
L D+E+ + KE L HSEKLA+V+ L+NT+ IRI KNLRVC DCH A KL+S+I
Sbjct: 577 LHDVEE-EDKEGHLAVHSEKLAIVFALLNTQE-YQIRITKNLRVCGDCHIAAKLISKIVE 634
Query: 442 REIVVRDRNRFHCFKDGACTCKDYW 466
REI+VRD NRFH FKDG C+C DYW
Sbjct: 635 REIIVRDTNRFHHFKDGVCSCGDYW 659
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 127/302 (42%), Gaps = 29/302 (9%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G G R +F M RNV + +I ++ L VF EM G +P+ T VL
Sbjct: 67 GEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVL 126
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
AC+ +L +G +H G N++V N LI MY KCGCL E RVF+ M + VV
Sbjct: 127 KACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVV 186
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH-------------V 207
SW+SM+ G+A + M G KP+ T ++ A ++ V
Sbjct: 187 SWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFV 246
Query: 208 GLVDKGRALLTIMRRDY--GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
L K +M R Y +P VDL + + + I SV P
Sbjct: 247 NLERKNLISWNVMIRVYMKNSLPTQA-----VDLYLQMEKCRVEPDAITFASVLPACGDL 301
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
ALL G R+H+ + E + L L N + ++YA G ++ R+ MK R
Sbjct: 302 SALLLGRRIHEYV----EKKKLCPNLLLENS-----LIDMYARCGCLDDAKRVFDRMKFR 352
Query: 326 GV 327
V
Sbjct: 353 DV 354
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/465 (40%), Positives = 289/465 (62%), Gaps = 1/465 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y CG+ A +FD M + + TWN +IA L+ G + A +F MP+ N+ SW
Sbjct: 375 IIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSW 434
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I + + M EEA+ + EM+ G K + VT+V + AC LG L+ K ++ + +
Sbjct: 435 NTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEK 494
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N ++ + AL+DM+ +CG RVFE M +R V +W++ I A+
Sbjct: 495 NDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIEL 554
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M++ +K + F+ +L A SH G VD+GR L M + +G+ P + HYGC+VDLL
Sbjct: 555 FDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLG 614
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG LEEA +++ +M + PN V+WG+ L CR HKN+ A A +++L G +V+
Sbjct: 615 RAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVL 674
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA AGKW +V+R+R MK +G +K G SSI + G++ EF +GDE+H + I M
Sbjct: 675 LSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLM 734
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
+++ ++ GY+PDT+ VL+D+ D ++KE L RHSEKLA+ YGLINT G+ IR++K
Sbjct: 735 LQEINCRISQVGYVPDTTNVLVDV-DEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVK 793
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLR+C DCH+ KLVS++ REI VRD NR+H FK+G C+C+D+W
Sbjct: 794 NLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 838
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 154/308 (50%), Gaps = 13/308 (4%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D+ N +I G V R +F M +RNV SWTS+I G + M +EA+ +F EM
Sbjct: 165 KDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM 224
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ G +PN VT+V + ACA+L DLE GK V G N V NAL+DMY+KCG +
Sbjct: 225 VEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDM 284
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
+F+ ++ +V +++++ + H M++ G +P+ VT + + AC
Sbjct: 285 YAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAAC 344
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPP 260
+ +G + G++ + R+ G+E ++D+ + G+ E A +V +MS
Sbjct: 345 AQLGDLSVGKSSHAYVFRN-----GLERLDNISNAIIDMYMKCGKREAACKVFDSMS-NK 398
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
V W +L+ G + LA + + +L++ + M +A +EE + R
Sbjct: 399 TVVTWNSLIAGLVRDGELELALRIFGEMPESNLVS---WNTMIGAMVQASMFEEAIDLLR 455
Query: 321 LMKSRGVK 328
M+++G+K
Sbjct: 456 EMQNQGIK 463
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 143/341 (41%), Gaps = 65/341 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y CG+ R +FD+ +++ +N ++++ + G G
Sbjct: 274 LLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAG----------------- 316
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
E L V EM + G +P++VT+++ + ACAQLGDL GKS H +
Sbjct: 317 --------------EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFR 362
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF------------ 169
NG R + NA+IDMY+KCG E +VF+ M +TVV+W+S+I G
Sbjct: 363 NGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRI 422
Query: 170 -------------------AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
M G+K + VT +G+ AC ++G +
Sbjct: 423 FGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGAL 482
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
D + + T + ++ I ++ LVD+ SR G A V NM + W A +
Sbjct: 483 DLAKWIYTYIEKN-DIHIDMQLGTALVDMFSRCGDPLNAMRVFENME-KRDVSAWTAAIR 540
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAG 310
+ N A E + K D+ D + +V + ++ G
Sbjct: 541 VKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGG 581
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 62 TSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
++I G A G+C+EA+ ++ M G P+ T +L AC+++ G VH
Sbjct: 100 NTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVV 159
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G +++++V N+LI Y CG ++ G +VF+ M ER VVSW+S+I G+++
Sbjct: 160 KMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVC 219
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ VG++PN VT + + AC+ + ++ G+ + +M + G+ L+D+
Sbjct: 220 LFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLM-TELGVKSNTLVVNALLDMY 278
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ G + RE+ S N V++ ++ H
Sbjct: 279 MKCGDMYAVREIFDEFS-DKNLVMYNTIMSNYVQH 312
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 282/436 (64%), Gaps = 1/436 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + A +F M +++V SWTS++ G A+ EE+LK+F +M G
Sbjct: 374 NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVN 433
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P++ V ++L ACA+L LEFGK VH +G + V N+L+ MY KCGCL++ +
Sbjct: 434 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 493
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F M+ + V++W+++IVG+A + M+ G +P+++TFIG+L ACSH GLV
Sbjct: 494 FVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLV 553
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
D+GR M + YGI PG EHY C++DL R+G+L+EA++++ M V P+ VW +LL
Sbjct: 554 DEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLS 613
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
CR+H+N+ LAE A +L +L+ +N YV++SN+Y+ + KW +V++IR+LMKS+G+ K
Sbjct: 614 ACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKE 673
Query: 331 PGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQ 390
PGCS + I+ V+ F++ D HP+ I+ +++++++K GY+PD S L D+ D +
Sbjct: 674 PGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDM-DKEG 732
Query: 391 KEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRN 450
KE+ L HSEKLA+ +GL+ P IRI KNLRVC DCH+A K +S + R I++RD N
Sbjct: 733 KEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSN 792
Query: 451 RFHCFKDGACTCKDYW 466
FH F++G C+C DYW
Sbjct: 793 CFHHFREGECSCGDYW 808
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 150/287 (52%), Gaps = 7/287 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+ + G+ AR +FDKMPQ+D +WN MI+ +NVG + AR+LF ++ +W
Sbjct: 42 LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 101
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+S+I G K G EA +F M +G K ++ T+ +VL C+ LG ++ G+ +H F
Sbjct: 102 SSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVK 161
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR--ERTVVSWSSMIVGFAMHXXXXXXX 179
NGF NV+V L+DMY KC C+ E +F+G+ + V W++M+ G+A +
Sbjct: 162 NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAV 221
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M G++ N TF +L ACS V G + + + G V LVD+
Sbjct: 222 EFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS-GFGSNVYVQSALVDM 280
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
++ G L+ A+ ++ M + V W +L+ G H L EEA+R
Sbjct: 281 YAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRHG---LEEEALR 323
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 119/232 (51%), Gaps = 6/232 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A+++ +M +V SW S++ G + G+ EEAL++F M K ++ T +VL
Sbjct: 285 GDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVL 344
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
C +G + KSVH GF V NAL+DMY K G ++ Y VFE M E+ V+
Sbjct: 345 NCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVI 402
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTI 219
SW+S++ G+A + M G+ P+ +L AC+ + L++ G+ + L
Sbjct: 403 SWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDF 462
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ G+ Y LV + ++ G L++A + +M V + + W A++ G
Sbjct: 463 IKS--GLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQV-KDVITWTAIIVG 511
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 276/443 (62%), Gaps = 1/443 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
R++ ++ G + AR +F M ++++ W+++I G A G+ EA+++F E
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M K +P+ +V L +CA LG LE G FL N + +LID Y KCG
Sbjct: 297 MRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+EE V++ M+E+ V ++++I G AM+ M + G+ PN TF+G+L
Sbjct: 357 MEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCG 416
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
C+H GLVD GR M D+ + P +EHYGC+VDLL+RAG L+EA +I M + N +
Sbjct: 417 CTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVI 476
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
VWG+LLGGCRLH+ LAE ++ L +L+ N G+YV++SN+Y+ + +W+E +IR +
Sbjct: 477 VWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVN 536
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
+G++K PG S + +DGVVHEF+ GD +HP ++ I+E E L +K GY P T VL
Sbjct: 537 EKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLF 596
Query: 384 DLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENRE 443
D+E+ ++KE FL HSEKLA+ + LI+T IR++KNLRVC DCH A K +S++ RE
Sbjct: 597 DVEE-EEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGRE 655
Query: 444 IVVRDRNRFHCFKDGACTCKDYW 466
IV+RD NRFHCF DGAC+C+DYW
Sbjct: 656 IVIRDNNRFHCFSDGACSCRDYW 678
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G++ A +F M +NV SWT +I G + G EA+ +F + + G +P+ +V VL
Sbjct: 153 GFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVL 212
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA+LGDLE G+ + R + G RNV+V +L+DMY KCG +EE VF+GM E+ +V
Sbjct: 213 RACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIV 272
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
WS+MI G+A + M +V ++P+ +G L +C+ +G ++ G +M
Sbjct: 273 CWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLM 332
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ + V L+D ++ G +EEA V M +RVV+ A++ G ++ +
Sbjct: 333 NYEEFLSNPVLGTS-LIDFYAKCGSMEEALGVYKMMK-EKDRVVFNAVISGLAMYGQVGA 390
Query: 281 AEEAMRHLSKLDL 293
A + K +
Sbjct: 391 AFGVFGQMGKFGI 403
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 9/315 (2%)
Query: 49 LFSSMP-QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
+F P N + ++I G+ A+ +++ M K P+ T VL ACA+L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
G +H GF +V+V ++ Y KCG L + ++VF+ M + VVSW+ MI
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
G ++ G++P+ + VL AC+ +G ++ GR + M R+ G+
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCM-RECGLS 237
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
V LVD+ ++ G +EEAR V M V + V W A++ G + A E
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGM-VEKDIVCWSAMIQGYASNGLPREAIELFFE 296
Query: 288 LSKLDLLNDGYYVVMS-NVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
+ K+++ D Y +V + + A G E + + LM P + ID F
Sbjct: 297 MRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLID-----FY 351
Query: 347 AGDETHPQAKGIFEM 361
A + +A G+++M
Sbjct: 352 AKCGSMEEALGVYKM 366
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/428 (43%), Positives = 287/428 (67%), Gaps = 3/428 (0%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G++ AR +F M +R++ SW ++I GLA+ +EA+ +F+ M+++G +PN+VTV+
Sbjct: 133 TGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGA 192
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERT 158
L AC+QLG L+ G+ VHR+ RNV VCNA+IDM+ KCG +++ Y VFE M ++
Sbjct: 193 LSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKS 252
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
+++W++MI+ FAM+ M G P+ V+++G L AC+H GLVD+G L
Sbjct: 253 LITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFD 312
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+M+ G+ V+HYG +VDLL RAGRL+EA E+I +M + P+ V+W +LLG C+ + N+
Sbjct: 313 LMKVS-GVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGNV 371
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+AE A + L ++ + G +V++SNVYA +W++V R+R M V+K PG S +
Sbjct: 372 EMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFSYTEV 431
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRH 398
DG +H+F+ D++HP +K I+ +++ ++K GYI +T++VL D+ D + KE L H
Sbjct: 432 DGRIHKFINYDQSHPNSKEIYAKLDEIKFRIKEYGYIAETNLVLHDIGD-EDKENALNYH 490
Query: 399 SEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDG 458
SEKLA+ YGLI+T G I+++KNLR+C DCHA K++S I NREI+VRDR RFH FKDG
Sbjct: 491 SEKLAVAYGLISTVDGTPIQVIKNLRICVDCHAFIKIISNIYNREIIVRDRARFHRFKDG 550
Query: 459 ACTCKDYW 466
C+C+DYW
Sbjct: 551 VCSCRDYW 558
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 128/292 (43%), Gaps = 8/292 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A ++F + + +++ GLA+ +++ + +M + + +T L
Sbjct: 33 GNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCVQRVDALTCSFAL 92
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
CA+ +H GF +V + L+D+Y K G ++ +VF+ M +R +
Sbjct: 93 KGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIA 152
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++MI G A M G +PN VT +G L ACS +G + +G I+
Sbjct: 153 SWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGE----IV 208
Query: 221 RR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
R D + V ++D+ ++ G +++A V +MS + + W ++ ++ +
Sbjct: 209 HRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGD 268
Query: 278 IVLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
A + + +S D Y+ AG +E R+ LMK GVK
Sbjct: 269 GYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSGVK 320
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/439 (42%), Positives = 280/439 (63%), Gaps = 6/439 (1%)
Query: 33 MIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
++ LIN+ G + A+R +F + + V ++ ++I LA+ EAL +F E+++ G
Sbjct: 149 VVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIG 208
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
KP +VT++ VL +CA LG L+ G+ +H + K GF R V V LIDMY KCG L++
Sbjct: 209 LKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAV 268
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
VF M +R +WS++IV +A H M + ++P+ +TF+G+L+ACSH G
Sbjct: 269 NVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNG 328
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
LV++G M +YGIVP ++HYGC+VDLL RAGRL+EA + I + + P ++W L
Sbjct: 329 LVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTL 388
Query: 269 LGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
L C H N+ + + + + +LD + G YV+ SN+ A GKW++V+ +R+ M +G
Sbjct: 389 LSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMIDKGAV 448
Query: 329 KTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL-DLED 387
K PGCSSI ++ VVHEF AG+ H + + ++L+ ++K GY+PDTS+V D+ED
Sbjct: 449 KIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAGYVPDTSLVFYADMED 508
Query: 388 AKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVR 447
++KEI L HSEKLA+ +GL+NT PG +IR++KNLRVC DCH A K +S I R+I++R
Sbjct: 509 -EEKEIILRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHNAAKFISLIFGRQIILR 567
Query: 448 DRNRFHCFKDGACTCKDYW 466
D RFH FKDG C+C DYW
Sbjct: 568 DVQRFHHFKDGKCSCGDYW 586
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 21/247 (8%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A LF + Q N+ + ++ G A+ + L++ + + L ++
Sbjct: 80 AHQLFDQITQPNIVLFNTMARGYARLN---DPLRMITHFRR------------CLRLVSK 124
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ L GK +H FA G N+YV LI+MY CG ++ RVF+ + E VV+++++
Sbjct: 125 VKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAI 184
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I+ A + + +G+KP VT + VL +C+ +G +D GR + +++ YG
Sbjct: 185 IMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKK-YG 243
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLHKNIVLAEE 283
V+ L+D+ ++ G L++A V +M P R W A++ H + A
Sbjct: 244 FDRYVKVNTTLIDMYAKCGSLDDAVNVFRDM---PKRDTQAWSAIIVAYATHGDGFQAIS 300
Query: 284 AMRHLSK 290
+ + K
Sbjct: 301 MLNEMKK 307
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/466 (42%), Positives = 278/466 (59%), Gaps = 2/466 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA + R +FD + + +W MI+ G A +LF P +N+ +W
Sbjct: 152 LVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAW 211
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T++I GL + G +AL +F EM ++G S + + + +V+ ACA E GK VH
Sbjct: 212 TALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVI 271
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G+ +++ NAL+DMY KC + +F MR + VVSW+S+IVG A H
Sbjct: 272 TLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALT 331
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ G+KPN VTF+G+++ACSHVGLV KGRAL M D+GI P ++HY CL+DL
Sbjct: 332 LYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLF 391
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
SR+G L+EA +I M V P+ W ALL C+ H N +A HL L + Y+
Sbjct: 392 SRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYI 451
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA AG WE VS +R+LM + VKK PG S + + F AG+ + P I
Sbjct: 452 LLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILG 511
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
+ KL +M+ +GY+PDTS VLLD+ D ++KE L+ HSE+LAL YGL+ PG +IRI+
Sbjct: 512 LMTKLDSEMRRRGYVPDTSSVLLDM-DQQEKERQLFWHSERLALAYGLLKAVPGTTIRIV 570
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH KL+S I +REI VRD R+H FKDG C+C D+W
Sbjct: 571 KNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDFW 616
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF ++PQ++ +W +V+ + +A + + +G +P+ +++
Sbjct: 57 GLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLI 116
Query: 101 VACAQLGDL--EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
ACA LG + + GK +H + F + V ++L+DMY K + G VF+ + E +
Sbjct: 117 KACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELS 176
Query: 159 VVSWSSMIVGFA 170
+SW++MI G+A
Sbjct: 177 SISWTAMISGYA 188
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/428 (45%), Positives = 273/428 (63%), Gaps = 3/428 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM--EKDGSKPNEVTVVA 98
GYV A +F +MP +N+ SW+++I AK M +AL++F M E + PN +T+V+
Sbjct: 228 GYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVS 287
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
VL ACA L LE GK VH + G + V N LI MY +CG + G RVF+ M++R
Sbjct: 288 VLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRD 347
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
V+SW+S+I + MH MI G+ P+Y+TFI VL ACSH GLV++ + L
Sbjct: 348 VISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFE 407
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
M Y I P +EHY C+VD+L RA RL+EA E+I NM P VWG+LLG CR+H N+
Sbjct: 408 SMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNV 467
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
LAE A L +L+ N G YV++S++YA++ W +V R+R+ ++SRG++K P CS I +
Sbjct: 468 ELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEV 527
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRH 398
++ V+ +E +PQ + + LL ++K +GY+P T+VV DL D ++KE + H
Sbjct: 528 KRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDL-DEEEKERIVLGH 586
Query: 399 SEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDG 458
S KLA+ +GLINT G IRI NLR+CEDCHA K VS+ NREI++RD NRFHCFKDG
Sbjct: 587 SGKLAVAFGLINTSKGEIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDG 646
Query: 459 ACTCKDYW 466
C+C DYW
Sbjct: 647 VCSCGDYW 654
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 11/275 (4%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
S G H RL+ + Q D +I ++G V A +F ++ + W ++
Sbjct: 91 SDGVDVHHRLVGSGLDQ-DPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRA 149
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA----QLGDLEFGKSVHRFAKGNG 123
LA E+ L ++ +M G N T VL AC + L GK +H +G
Sbjct: 150 LAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHG 209
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
+ +V+V L+D+Y + G + VF M ++ +VSWS+MI +A +
Sbjct: 210 YEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQ 269
Query: 184 XMI--RVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLL 240
M+ PN +T + VL AC+ + ++ G+ + ++RR G+ + L+ +
Sbjct: 270 IMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR--GLDSTLPVLNTLITMY 327
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
R G + + V M + + W +L+ +H
Sbjct: 328 GRCGEISTGQRVFDYMK-KRDVISWNSLISIYGMH 361
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 51 SSMPQRNVRSWTS--VIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
S P ++++S + +I L + G ++A+++ P + T ++ +C +
Sbjct: 34 SGYPTKDIKSNNNDDLIQSLCRGGNLKQAVQLLC----CEPNPTKKTFELLINSCIEQNS 89
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L G VH G+G ++ Y+ LI+MY G ++ +VF+ RE+T+ W+++
Sbjct: 90 LSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRA 149
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC--SHVGL--VDKGRALLTIMRRDY 224
AM M +G+ N T+ VL AC S + + + KG+ + + R +
Sbjct: 150 LAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILR-H 208
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G V L+D+ +R G + A V M N V W A++
Sbjct: 209 GYEGHVHVMTTLLDVYARFGYVSYASSVFGAMP-DKNIVSWSAMIA 253
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/424 (43%), Positives = 272/424 (64%), Gaps = 1/424 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ +A +F M +NV SWT+++ G + G EEA+K FS+M+K G +P++ T+ +V+ +
Sbjct: 326 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 385
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CA L LE G H A +G + + V NAL+ +Y KCG +E+ +R+F + + V+W
Sbjct: 386 CANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTW 445
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
++++ G+A M+ G+KP+ VTFIGVL ACS GLV+KG + M
Sbjct: 446 TALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN 505
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
++GIVP +HY C++DL SRAGR+EEAR I M P+ + W LL CR + N+ + +
Sbjct: 506 EHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGK 565
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
A L +LD N YV++S+VYA GKWEEV+R+R+ M+ +G++K PGCS I V
Sbjct: 566 WAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQV 625
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKL 402
H F A D+++P + I+ EKL KM +GY+PD + VL D+ D+++ ++ L HSEKL
Sbjct: 626 HVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKM-LNHHSEKL 684
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A+ +GL+ PG+ IR++KNLRVC DCH A K +S+I NREI+VRD RFH FKDG C+C
Sbjct: 685 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSC 744
Query: 463 KDYW 466
D+W
Sbjct: 745 GDFW 748
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 159/300 (53%), Gaps = 16/300 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ G AR +FD++P++++ +N +I L+ G V ++ LF M +R+ SW
Sbjct: 184 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 243
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS+I G + G+ +A+ +F EM+ + + ++ T +VL AC + L+ GK VH +
Sbjct: 244 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIR 303
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ N++V +AL++MY KC ++ VF+ M + VVSW++M+VG+ +
Sbjct: 304 TDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-----RALLTIMRRDYGIVPGVEHYGCL 236
M + G++P+ T V+ +C+++ +++G RAL + G++ + L
Sbjct: 364 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS------GLISFITVSNAL 417
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLD 292
V L + G +E++ + +S + V W AL+ G + ++ I L E + H K D
Sbjct: 418 VTLYGKCGSIEDSHRLFNEISF-KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 476
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 40/324 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA G +A +FD+MP ++ +WN +++ +G V LF +MP+R+ SW
Sbjct: 50 LISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSW 109
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK-DGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+I G A CG+ +++K ++ M K DGS N +T +L+ ++ G ++ G+ +H
Sbjct: 110 NSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHV 169
Query: 120 KGNGFLRNVYVCNALIDMYVK-------------------------------CGCLEEGY 148
GF+ V+V + L+DMY K CG +E+
Sbjct: 170 VKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSK 229
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
R+F MRER +SW+SMI GF + M ++ + TF VL AC V
Sbjct: 230 RLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVM 289
Query: 209 LVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ +G+ + I+R DY + LV++ + ++ A V M+ N V W A
Sbjct: 290 ALQEGKQVHAYIIRTDYK--DNIFVASALVEMYCKCKNIKSAEAVFKKMTC-KNVVSWTA 346
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKL 291
+L G + +EEA++ S +
Sbjct: 347 MLVG---YGQNGYSEEAVKTFSDM 367
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/424 (43%), Positives = 272/424 (64%), Gaps = 1/424 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ +A +F M +NV SWT+++ G + G EEA+K FS+M+K G +P++ T+ +V+ +
Sbjct: 326 IKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS 385
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CA L LE G H A +G + + V NAL+ +Y KCG +E+ +R+F + + V+W
Sbjct: 386 CANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTW 445
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
++++ G+A M+ G+KP+ VTFIGVL ACS GLV+KG + M
Sbjct: 446 TALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN 505
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
++GIVP +HY C++DL SRAGR+EEAR I M P+ + W LL CR + N+ + +
Sbjct: 506 EHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGK 565
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
A L +LD N YV++S+VYA GKWEEV+R+R+ M+ +G++K PGCS I V
Sbjct: 566 WAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQV 625
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKL 402
H F A D+++P + I+ EKL KM +GY+PD + VL D+ D+++ ++ L HSEKL
Sbjct: 626 HVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKM-LNHHSEKL 684
Query: 403 ALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
A+ +GL+ PG+ IR++KNLRVC DCH A K +S+I NREI+VRD RFH FKDG C+C
Sbjct: 685 AIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSC 744
Query: 463 KDYW 466
D+W
Sbjct: 745 GDFW 748
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 159/300 (53%), Gaps = 16/300 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ G AR +FD++P++++ +N +I L+ G V ++ LF M +R+ SW
Sbjct: 184 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 243
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS+I G + G+ +A+ +F EM+ + + ++ T +VL AC + L+ GK VH +
Sbjct: 244 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIR 303
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ N++V +AL++MY KC ++ VF+ M + VVSW++M+VG+ +
Sbjct: 304 TDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 363
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-----RALLTIMRRDYGIVPGVEHYGCL 236
M + G++P+ T V+ +C+++ +++G RAL + G++ + L
Sbjct: 364 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS------GLISFITVSNAL 417
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLD 292
V L + G +E++ + +S + V W AL+ G + ++ I L E + H K D
Sbjct: 418 VTLYGKCGSIEDSHRLFNEISF-KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 476
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 40/324 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA G +A +FD+MP ++ +WN +++ +G V LF +MP+R+ SW
Sbjct: 50 LISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSW 109
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK-DGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+I G A CG+ +++K ++ M K DGS N +T +L+ ++ G ++ G+ +H
Sbjct: 110 NSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHV 169
Query: 120 KGNGFLRNVYVCNALIDMYVK-------------------------------CGCLEEGY 148
GF+ V+V + L+DMY K CG +E+
Sbjct: 170 VKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSK 229
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
R+F MRER +SW+SMI GF + M ++ + TF VL AC V
Sbjct: 230 RLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVM 289
Query: 209 LVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ +G+ + I+R DY + LV++ + ++ A V M+ N V W A
Sbjct: 290 ALQEGKQVHAYIIRTDYK--DNIFVASALVEMYCKCKNIKSAEAVFKKMTC-KNVVSWTA 346
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKL 291
+L G + +EEA++ S +
Sbjct: 347 MLVG---YGQNGYSEEAVKTFSDM 367
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/440 (42%), Positives = 271/440 (61%), Gaps = 1/440 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D W ++ G + AR +F M +++ SWT++I+ + G +E +F ++
Sbjct: 230 DEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLM 289
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G +PNE T VL ACA L + GK VH + G+ + +AL+ +Y KCG E
Sbjct: 290 GSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTE 349
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
RVF M +VSW+S+IVG+A + ++R G KP+ +TF+GVL AC+
Sbjct: 350 TARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACT 409
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLVD G ++ +G+V +HY C++DLL+R+GR +EA +I NM + P++ +W
Sbjct: 410 HAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLW 469
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
+LLGGCR+H NI LAE A + L +L+ N Y+ +SN+YA AG W E +++R M +R
Sbjct: 470 ASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNR 529
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G+ K PG S I I VH F+ GD +HP+ I E +L KMK +GY+ DT+ VL D+
Sbjct: 530 GIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVADTNFVLHDV 589
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
E+ +QKE ++ HSEKLA+ +G+I+T PG I++ KNLR C DCH A K +S+I R+I+
Sbjct: 590 EE-EQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYISKIVQRKII 648
Query: 446 VRDRNRFHCFKDGACTCKDY 465
VRD NRFHCF DG+C+CKDY
Sbjct: 649 VRDSNRFHCFVDGSCSCKDY 668
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/271 (35%), Positives = 141/271 (52%), Gaps = 3/271 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H+YA CG A+++FD++PQ+D+ +WN MI+ NVG + AR LF MP R+ SW
Sbjct: 104 LIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSW 163
Query: 62 TSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+VI G G EAL +F M E + S N T+ + L A A + L GK +H +
Sbjct: 164 NAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLI 223
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+G + V AL+D+Y KCG L E +F+ M ++ +VSW++MI
Sbjct: 224 RSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFS 283
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
++ G++PN TF GVL+AC+ + G+ + M R G P LV +
Sbjct: 284 LFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTR-VGYDPFSFAASALVHVY 342
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
S+ G E AR V M P+ V W +L+ G
Sbjct: 343 SKCGNTETARRVFNQMPR-PDLVSWTSLIVG 372
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
+P+ ++ AC + LE GK VH K + F+ + + N LI MY KCG L +
Sbjct: 60 QPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQM 119
Query: 150 VFEGMRERTVVSWSSMIVGFA 170
+F+ + ++ + SW++MI G+A
Sbjct: 120 LFDEIPQKDLCSWNTMISGYA 140
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 271/452 (59%), Gaps = 1/452 (0%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
AR +F+ MP R++ +WN +I+ G + AR+LF M QR+ SW ++I G A+ G
Sbjct: 284 ARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHY 343
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
E+ + + +M++DG N T L CA + L GK VH A G+ V NAL
Sbjct: 344 EKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNAL 403
Query: 135 IDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
++MY KCG + E Y VFE M+ + ++SW++M+ G+A H M G KP+
Sbjct: 404 LEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDE 463
Query: 195 VTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
+T +GVL ACSH GL D+G M +DYGI P +HY C++DLL RAG LEEA ++
Sbjct: 464 ITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMR 523
Query: 255 NMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEE 314
NM P+ WGALLG R+H N L E+A + ++ N G YV++SN+YA GKW +
Sbjct: 524 NMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVD 583
Query: 315 VSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 374
V ++R M+ G++K PG S + + +H+F GD HP+ I+ E++ +KMK +G+
Sbjct: 584 VGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKHEGH 643
Query: 375 IPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFK 434
+ +VL D+E+ ++K + Y HSEKLA+ +G++ G IR+MKNLRVCEDCH K
Sbjct: 644 VSLVKLVLHDVEEEEKKRMLKY-HSEKLAVAFGILTIPAGRPIRVMKNLRVCEDCHNVIK 702
Query: 435 LVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+S+I R I++RD +RFH +G C+C DYW
Sbjct: 703 YISKIVGRLIILRDSHRFHYVSEGICSCGDYW 734
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 122/268 (45%), Gaps = 24/268 (8%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
AR +FD MP R+ +WN MI+ G + AR LF P R+V +WT++++ + GM
Sbjct: 191 ARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGML 250
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
+EA +VF EM E+ ++ Q ++ + + RNV N +
Sbjct: 251 DEARRVFDEM----PGKREMAYNVMIAGYVQYKKMDMARELFEAMP----CRNVGSWNTI 302
Query: 135 IDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
I Y + G + + +F+ M +R VSW+++I G+A M R G N
Sbjct: 303 ISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNR 362
Query: 195 VTFIGVLHACSHVGLVDKGRALLTIMRRDYG--IVPGVEHYGCLV-----DLLSRAGRLE 247
TF L C+ G A L + ++ +G + G ++ GCLV ++ + G +
Sbjct: 363 STFCCALSTCA-------GMAALVLGKQVHGQAVKTGYDN-GCLVGNALLEMYCKCGSIG 414
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLH 275
EA +V M + + + W +L G H
Sbjct: 415 EAYDVFERMQL-KDIISWNTMLAGYARH 441
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 154/352 (43%), Gaps = 31/352 (8%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G A +FD MP +++ +WN+M+ + + AR+LF MPQ++ SW ++ G
Sbjct: 62 GHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYV 121
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ G +EA VF M S ++ +L Q G LE + + + +
Sbjct: 122 RSGCVDEAKLVFDNMPYKDS----ISWNGLLAVYVQNGRLEEARRLFE----SKVDWELI 173
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
N L+ YVK L + R+F+ M R +SW++MI G+A +
Sbjct: 174 SWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYA----RDGDLLQARRLFEES 229
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH--YGCLVDLLSRAGRLE 247
+ T+ ++ A G++D+ RR + +PG Y ++ + +++
Sbjct: 230 PVRDVFTWTAMVFAYVQSGMLDEA-------RRVFDEMPGKREMAYNVMIAGYVQYKKMD 282
Query: 248 EAREVIANMSVPPNRVV--WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
ARE+ M P R V W ++ G + +I A E +++ D ++ + +
Sbjct: 283 MARELFEAM---PCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVS---WAAIIAG 336
Query: 306 YAEAGKWEEVSRIRRLMKSRG--VKKTPGCSSITIDGVVHEFVAGDETHPQA 355
YA+ G +E+V + MK G + ++ C +++ + V G + H QA
Sbjct: 337 YAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQA 388
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 176/441 (39%), Positives = 271/441 (61%), Gaps = 1/441 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D N +I+ G + A M ++ S++++I G + G E+AL +F +M+
Sbjct: 346 DTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQ 405
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G P T++A+L AC+ L L+ G H + GF + +CNA+IDMY KCG +
Sbjct: 406 SSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKIT 465
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+F+ M+ R ++SW++MI+G+ +H + +G+KP+ VT I VL ACS
Sbjct: 466 ISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACS 525
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLV +G+ + M +++ I P + HY C+VDLL+RAG L+EA I M PN +W
Sbjct: 526 HSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIW 585
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
GALL CR HKNI + E+ + + L G +V+MSN+Y+ G+W++ + IR + +
Sbjct: 586 GALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHH 645
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G KK+PGCS + I GV+H F+ G ++HPQ+ I + ++LLV+MK GY D+S VL D+
Sbjct: 646 GYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDV 705
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
E+ ++++I LY HSEK+A+ +G++NT P I + KNLR+C DCH+A K ++ + REI
Sbjct: 706 EEEEKEQILLY-HSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREIT 764
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
VRD +RFH FKDG C C+D+W
Sbjct: 765 VRDASRFHHFKDGICNCQDFW 785
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F +P+ +V W +I A G ++++ ++ M + G P T +L AC+
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWS 163
L L+ G+ +H A G ++YV AL+ MY KCG L + +F + ++R +V+W+
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+MI F+ H M + G+ PN T + +L + +G+A+ R+
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+ V L+D+ ++ L AR++ N N V W A++GG LH +I
Sbjct: 240 F-FFDNVVLQTALLDMYAKCHLLFYARKIF-NTVNKKNDVCWSAMIGGYVLHDSI 292
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 32/272 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLH+YA CG A+ +F+ + +D R++ +W
Sbjct: 148 LLHMYAKCGHLYQAQTLFNSISHQD-----------------------------RDIVAW 178
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I + + + + ++M++ G PN T+V++L Q L GK++H +
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N F NV + AL+DMY KC L ++F + ++ V WS+MI G+ +H
Sbjct: 239 NFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALAL 298
Query: 182 XXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ + G+ P T +L AC+ + + +G+ L M + G+ L+ +
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMY 357
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
++ G ++ A + M + + V + A++ GC
Sbjct: 358 AKCGIMDNAVGFLDEM-IAKDTVSYSAIISGC 388
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 118/256 (46%), Gaps = 11/256 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACA 104
AR +F+++ ++N W+++I G +AL ++ +M G P T+ +L ACA
Sbjct: 264 ARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACA 323
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
QL DL+ GK +H +G + V N+LI MY KCG ++ + M + VS+S+
Sbjct: 324 QLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSA 383
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL--LTIMRR 222
+I G + M G+ P T I +L ACSH+ + G T++R
Sbjct: 384 IISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVR- 442
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLHKNIVL 280
G ++D+ S+ G++ +RE+ M NR + W ++ G +H V
Sbjct: 443 --GFTNDTSICNAIIDMYSKCGKITISREIFDRMQ---NRDIISWNTMIIGYGIHGLCVE 497
Query: 281 AEEAMRHLSKLDLLND 296
A + L L L D
Sbjct: 498 ALSLFQELQALGLKPD 513
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 36/156 (23%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y+ CG+ +R +FD+M RDI +WN MI
Sbjct: 454 IIDMYSKCGKITISREIFDRMQNRDIISWNTMI--------------------------- 486
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+ YG+ G+C EAL +F E++ G KP++VT++AVL AC+ G + GK
Sbjct: 487 --IGYGIH--GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQ 542
Query: 122 NGFLRNV---YVCNALIDMYVKCGCLEEGYRVFEGM 154
N ++ Y+C ++D+ + G L+E Y + M
Sbjct: 543 NFNIKPRMAHYIC--MVDLLARAGNLDEAYTFIQRM 576
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 278/441 (63%), Gaps = 6/441 (1%)
Query: 31 NIMIAHLINVGY-----VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
NI +A + V Y + +A +F M +NV SWT+++ G + G EEA+K FS+M+
Sbjct: 318 NIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 377
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
K G +P++ T+ +V+ +CA L LE G H A +G + + V NAL+ +Y KCG +E
Sbjct: 378 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 437
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ +R+F + + V+W++++ G+A M+ G+KP+ VTFIGVL ACS
Sbjct: 438 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 497
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
GLV+KG + M ++GIVP +HY C++DL SRAGR+EEAR I M P+ + W
Sbjct: 498 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 557
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
LL CR + N+ + + A L +LD N YV++S+VYA GKWEEV+R+R+ M+ +
Sbjct: 558 ATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDK 617
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G++K PGCS I VH F A D+++P + I+ EKL KM +GY+PD + VL D+
Sbjct: 618 GLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDV 677
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
D+++ ++ L HSEKLA+ +GL+ PG+ IR++KNLRVC DCH A K +S+I +REI+
Sbjct: 678 GDSEKIKM-LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITHREIL 736
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
VRD RFH FKDG C+ D+W
Sbjct: 737 VRDTARFHLFKDGTCSYGDFW 757
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 158/300 (52%), Gaps = 16/300 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ G AR +FD++P++++ +N +I L+ G V ++ LF M +R+ SW
Sbjct: 193 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 252
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS+I G + G+ +A+ +F EM+ + + ++ T +VL AC + L+ GK VH +
Sbjct: 253 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIR 312
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ N++V +AL+ MY KC ++ VF+ M + VVSW++M+VG+ +
Sbjct: 313 TDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 372
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-----RALLTIMRRDYGIVPGVEHYGCL 236
M + G++P+ T V+ +C+++ +++G RAL + G++ + L
Sbjct: 373 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS------GLISFITVSNAL 426
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLD 292
V L + G +E++ + +S + V W AL+ G + ++ I L E + H K D
Sbjct: 427 VTLYGKCGSIEDSHRLFNEISF-KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 485
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 40/324 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA G +A +FD+MP ++ +WN +++ +G V LF +MP+R+ SW
Sbjct: 59 LISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSW 118
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK-DGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+I G A CG+ +++K ++ M K DGS N +T +L+ ++ G ++ G+ +H
Sbjct: 119 NSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHV 178
Query: 120 KGNGFLRNVYVCNALIDMYVK-------------------------------CGCLEEGY 148
GF+ V+V + L+DMY K CG +E+
Sbjct: 179 VKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSK 238
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
R+F MRER +SW+SMI GF + M ++ + TF VL AC V
Sbjct: 239 RLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVM 298
Query: 209 LVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ +G+ + I+R DY + LV + + ++ A V M+ N V W A
Sbjct: 299 ALQEGKQVHAYIIRTDYK--DNIFVASALVVMYCKCKNIKSAEAVFKKMTC-KNVVSWTA 355
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKL 291
+L G + +EEA++ S +
Sbjct: 356 MLVG---YGQNGYSEEAVKTFSDM 376
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 278/441 (63%), Gaps = 6/441 (1%)
Query: 31 NIMIAHLINVGY-----VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
NI +A + V Y + +A +F M +NV SWT+++ G + G EEA+K FS+M+
Sbjct: 318 NIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQ 377
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
K G +P++ T+ +V+ +CA L LE G H A +G + + V NAL+ +Y KCG +E
Sbjct: 378 KYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIE 437
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ +R+F + + V+W++++ G+A M+ G+KP+ VTFIGVL ACS
Sbjct: 438 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 497
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
GLV+KG + M ++GIVP +HY C++DL SRAGR+EEAR I M P+ + W
Sbjct: 498 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISW 557
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
LL CR + N+ + + A L +LD N YV++S+VYA GKWEEV+R+R+ M+ +
Sbjct: 558 ATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDK 617
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G++K PGCS I VH F A D+++P + I+ EKL KM +GY+PD + VL D+
Sbjct: 618 GLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDV 677
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
D+++ ++ L HSEKLA+ +GL+ PG+ IR++KNLRVC DCH A K +S+I +REI+
Sbjct: 678 GDSEKIKM-LNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYISKITHREIL 736
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
VRD RFH FKDG C+ D+W
Sbjct: 737 VRDTARFHLFKDGTCSYGDFW 757
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 158/300 (52%), Gaps = 16/300 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ G AR +FD++P++++ +N +I L+ G V ++ LF M +R+ SW
Sbjct: 193 LVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISW 252
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS+I G + G+ +A+ +F EM+ + + ++ T +VL AC + L+ GK VH +
Sbjct: 253 TSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIR 312
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ N++V +AL+ MY KC ++ VF+ M + VVSW++M+VG+ +
Sbjct: 313 TDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKT 372
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-----RALLTIMRRDYGIVPGVEHYGCL 236
M + G++P+ T V+ +C+++ +++G RAL + G++ + L
Sbjct: 373 FSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTS------GLISFITVSNAL 426
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMRHLSKLD 292
V L + G +E++ + +S + V W AL+ G + ++ I L E + H K D
Sbjct: 427 VTLYGKCGSIEDSHRLFNEISF-KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPD 485
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 40/324 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA G +A +FD+MP ++ +WN +++ +G V LF +MP+R+ SW
Sbjct: 59 LISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSW 118
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK-DGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+I G A CG+ +++K ++ M K DGS N +T +L+ ++ G ++ G+ +H
Sbjct: 119 NSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHV 178
Query: 120 KGNGFLRNVYVCNALIDMYVK-------------------------------CGCLEEGY 148
GF+ V+V + L+DMY K CG +E+
Sbjct: 179 VKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSK 238
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
R+F MRER +SW+SMI GF + M ++ + TF VL AC V
Sbjct: 239 RLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVM 298
Query: 209 LVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+ +G+ + I+R DY + LV + + ++ A V M+ N V W A
Sbjct: 299 ALQEGKQVHAYIIRTDYK--DNIFVASALVVMYCKCKNIKSAEAVFKKMTC-KNVVSWTA 355
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKL 291
+L G + +EEA++ S +
Sbjct: 356 MLVG---YGQNGYSEEAVKTFSDM 376
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/475 (41%), Positives = 293/475 (61%), Gaps = 11/475 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++Y G AR MF+ + R + +W+ + L+ V + R LF MP+RN +W
Sbjct: 164 LMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAW 223
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKD-GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA- 119
T +I G G +EA + EM G + + VT+ +VL AC+Q GD+ G+ VH +A
Sbjct: 224 TVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAV 283
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
K G V V +L+DMY KCG + VF M +R VV+W++M+ G AMH
Sbjct: 284 KEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAV 343
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+ +KP+ VTF+ +L ACSH GLV+KG + Y I P +EHY C+V L
Sbjct: 344 DMFPSMVE-EVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGL 402
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAGRLEEA ++ NM +PPN VV G+L+G C H + L E+ MR L ++D LN Y+
Sbjct: 403 LGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYH 462
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
+V+SN+YA +GK E+ + +R+++K RG+KK PG SSI +DG +H+F+AGD++H + I+
Sbjct: 463 IVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIY 522
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLD--------LEDAKQKEIFLYRHSEKLALVYGLINT 411
++++ +++ GY+P+TS +L E ++ E L+ HSEKLAL +GL++T
Sbjct: 523 MKLDEMICRLRSAGYVPNTSCQVLFGCSNRDDCSESLEEVEQVLFTHSEKLALCFGLMST 582
Query: 412 KPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
G + I KNLR+C+DCH+A K+ S++ REIVVRDR RFH FK G+C+C DYW
Sbjct: 583 PSGSPLHIFKNLRICQDCHSAIKIASKVYKREIVVRDRYRFHSFKHGSCSCSDYW 637
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 133/310 (42%), Gaps = 72/310 (23%)
Query: 2 LLHLYASCGETRHARLMFDKMPQ--RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
LLHLY SC HAR +FD++PQ +D + +I H
Sbjct: 63 LLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALIRHCPPF------------------- 103
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG--DLEFGKSVHR 117
E+LK+F +M + + V +V L ACA+LG D + G +H
Sbjct: 104 ----------------ESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHV 147
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS------------- 164
GF++ VCNAL+++YVK G + E ++FEG+ R+VVSWS
Sbjct: 148 GVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVES 207
Query: 165 ------------------MIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACS 205
MIVG+ + M+ G + ++VT VL ACS
Sbjct: 208 GRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACS 267
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
G V GR + ++ G+ GV LVD+ ++ GR+ A V +M + N V W
Sbjct: 268 QSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSM-LKRNVVAW 326
Query: 266 GALLGGCRLH 275
A+LGG +H
Sbjct: 327 NAMLGGLAMH 336
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/422 (44%), Positives = 269/422 (63%), Gaps = 3/422 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR LF M +++ +WT +I A E+L +F + ++G ++V +V V+ ACA+
Sbjct: 155 ARKLFDVMVSKDLVTWTVMIGCYADYD-AYESLVLFDRLREEGFVSDKVAMVTVVNACAK 213
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG + + V+ + GNG +V + A+IDMY KCGC++ VF+ M+E+ V+SWS+M
Sbjct: 214 LGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAM 273
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I + H M+ G+ PN +TF+ +L+ACSH GL D+G M RDYG
Sbjct: 274 IAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRDYG 333
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ P V+HY C+VDLL RAGRL+EA ++I M+V + +W ALLG CR+H N+ LA +
Sbjct: 334 VRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLGACRVHGNMELAGKVA 393
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
L +L N G YV++SN+YA+AGKWE+V R LM R +KK PG + I +D ++F
Sbjct: 394 ESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKLKKVPGWTWIEVDNKTYQF 453
Query: 346 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALV 405
GD +HPQ+K I+EM ++ K++M GY+PDT VL D+E+ +KE+ LY HSEKLA+
Sbjct: 454 SVGDRSHPQSKEIYEMLTSVIKKLEMVGYVPDTEFVLQDVEEEVKKEM-LYTHSEKLAIA 512
Query: 406 YGLIN-TKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKD 464
+GLI G IRI KNLRVC DCH K+VS++ R I+VRD NRFH F +GAC+C D
Sbjct: 513 FGLIAIPNKGDPIRISKNLRVCGDCHTFCKMVSDVMKRSIIVRDANRFHHFNEGACSCGD 572
Query: 465 YW 466
YW
Sbjct: 573 YW 574
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 3/233 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ A LF MP R+ +W+ ++ G +K G F E+ + P+ T+ V+ A
Sbjct: 51 INDAYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYATFREILRCNITPDNYTLPFVIRA 110
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C D++ G+ +H G + + +VC L+DMY KC +E+ ++F+ M + +V+W
Sbjct: 111 CRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTW 170
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+ MI +A + + G + V + V++AC+ +G + + R + +
Sbjct: 171 TVMIGCYADY-DAYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYICG 229
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ G+ V ++D+ ++ G ++ AREV M N + W A++ H
Sbjct: 230 N-GLSLDVILGTAMIDMYAKCGCVDSAREVFDRMK-EKNVISWSAMIAAYGYH 280
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
+ VH A NG N+ V N L+ YV+ + + Y +F+ M R +WS M+ GF+
Sbjct: 20 RQVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKL 79
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
++R + P+ T V+ AC + GR + ++ + YG+V ++H
Sbjct: 80 GDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLK-YGLV--LDH 136
Query: 233 YGC--LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ C LVD+ ++ +E+AR++ M V + V W ++G
Sbjct: 137 FVCATLVDMYAKCAVIEDARKLFDVM-VSKDLVTWTVMIG 175
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ MI G V +AR++F M ++NV SW+++I G +EAL +F M
Sbjct: 235 DVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMML 294
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA---KGNGFLRNVYVCNALIDMYVKCG 142
G PN +T V++L AC+ G + G +H F + G +V ++D+ + G
Sbjct: 295 SCGISPNRITFVSLLYACSHSGLTDEG--LHFFDSMWRDYGVRPDVKHYTCVVDLLGRAG 352
Query: 143 CLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
L+E ++ E M E+ WS+++ +H
Sbjct: 353 RLDEALKLIETMNVEKDERLWSALLGACRVH 383
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/470 (41%), Positives = 284/470 (60%), Gaps = 7/470 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWN-IMIAHLINVGYVGAARDLFSSMPQRNVR- 59
L+ LYA C R AR++FD MP RD+ +WN ++ A+ N Y LF M + VR
Sbjct: 220 LVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEY-EKGFSLFLKMSRDGVRA 278
Query: 60 ---SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+W +VI G + G EEA+++F +M+K G KPNE+T+ ++L AC+ +L GK +H
Sbjct: 279 DEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIH 338
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
+ + + ++ AL+ MY KCG L VF+ MR + VV+W++MI+ AMH
Sbjct: 339 CYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGK 398
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M+ ++PN VTF GVL CSH LV++G + M RD+ + P HY C+
Sbjct: 399 EALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCV 458
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
VD+ SRAGRL EA + I M + P WGALL CR++KN+ LA+ + + L +++ N
Sbjct: 459 VDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNP 518
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
G YV + N+ A W E S++R LMK RG+ KTPGCS + + VH FV GD+++ ++
Sbjct: 519 GNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESD 578
Query: 357 GIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMS 416
I+ ++L+ KMKM GY PDT VL D+ D ++K L HSEKLA+ +G++N +
Sbjct: 579 KIYNFLDELVEKMKMAGYKPDTDYVLQDI-DQEEKAESLCNHSEKLAVAFGILNLNGQST 637
Query: 417 IRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IR+ KNLR+C DCH A K +S++ IVVRD RFH FK+G C+CKD W
Sbjct: 638 IRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 134/309 (43%), Gaps = 46/309 (14%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I V AR +F + R+V SWTS+ KCG + + VF EM
Sbjct: 112 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMG 171
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G KPN +TV ++L ACA+L DL+ GK +H FA +G + N++VC+AL+ +Y KC +
Sbjct: 172 WSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVR 231
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E VF+ M R VVSW+ ++ + + M R G++ + T+ V+ C
Sbjct: 232 EARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCM 291
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV---IANMSVPPNR 262
GR EEA E+ + M PN
Sbjct: 292 E------------------------------------NGRSEEAVEMFRKMQKMGFKPNE 315
Query: 263 VVWGALLGGCRLHKNIVLAEE----AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRI 318
+ ++L C +N+ + +E RH DL + + M YA+ G +
Sbjct: 316 ITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYM---YAKCGDLNLSRNV 372
Query: 319 RRLMKSRGV 327
+M+ + V
Sbjct: 373 FDMMRRKDV 381
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 141/308 (45%), Gaps = 15/308 (4%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+NVG AR LF ++PQ + + +++I L G+ EA+K++S +++ G KP+ +
Sbjct: 23 LNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFL 82
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
A ACA GD K VH A G + +V+V NALI Y KC C+E RVF+ + R
Sbjct: 83 AAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR 142
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
VVSW+S+ + M G+KPN +T +L AC+ + + G+ +
Sbjct: 143 DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 202
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLH 275
R +G+V + LV L ++ + EAR V M P+R V W +L +
Sbjct: 203 GFAVR-HGMVVNLFVCSALVSLYAKCLSVREARMVFDLM---PHRDVVSWNGVLTAYFKN 258
Query: 276 KNIVLAEEAMRHLSKLDLLND-GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT---- 330
K +S+ + D + + E G+ EE + R M+ G K
Sbjct: 259 KEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITI 318
Query: 331 ----PGCS 334
P CS
Sbjct: 319 SSILPACS 326
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/423 (43%), Positives = 261/423 (61%), Gaps = 5/423 (1%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKC-GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
+F +P+ ++ W ++I G ++ +CE+AL F EM++ G P++ + V V+ AC+ L
Sbjct: 302 VFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLS 361
Query: 108 DLEFGKSVHRFA-KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
GK VH A K + V V NA + MY KCG L + R+F+ M E+ VS +SMI
Sbjct: 362 SPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMI 421
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
G+A H M++ + PN +TFI VL AC+H G VD+G +M+ +GI
Sbjct: 422 AGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGI 481
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
P EHY C++DLL RAG+L +A +I M P + W ALLG C+ H N+ LA +A
Sbjct: 482 EPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLGACKKHGNVELAVKAAN 541
Query: 287 HLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
+L+ N YV++SNVYA A +WEE + ++RLM+ RGVKK PGCS I ID VH FV
Sbjct: 542 KFLQLEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFV 601
Query: 347 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDA---KQKEIFLYRHSEKLA 403
A D +HP+ K I +LL+K+K GY+ D + L+ ED ++KE L+ HSEKLA
Sbjct: 602 AEDTSHPRIKEIHTYMSELLMKLKQAGYVADIRLALVKDEDVIAIEEKERRLWHHSEKLA 661
Query: 404 LVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCK 463
+ + LI+T+ G I ++KNLR+C DCH A KL+S I REI VRD +RFHCFK+G C+C+
Sbjct: 662 IAFALISTEEGAPILVVKNLRICGDCHNAIKLISAISGREITVRDTHRFHCFKEGQCSCR 721
Query: 464 DYW 466
DYW
Sbjct: 722 DYW 724
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 163/357 (45%), Gaps = 14/357 (3%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQ--RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
N ++A +G + A +F M + R++ SW ++I + +AL++F EME+ G
Sbjct: 179 NAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMG 238
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC--LEE 146
+ + T+ +VL A L DL G H +GF RN +V + LID+Y KC + E
Sbjct: 239 LEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLE 298
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXX-XXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+VFE + + +V W++MI GF+ H M RVG P+ +F+ V+ ACS
Sbjct: 299 CMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACS 358
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
++ G+ + + + V V + S+ G L +AR + M N V
Sbjct: 359 NLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMP-EQNTVSL 417
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
+++ G H + + + + + ++ N+ ++ + + A GK +E + +MK
Sbjct: 418 NSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKE 477
Query: 325 R-GVKKTPGCSSITID-----GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
+ G++ S ID G +++ ET P G E W LL K G +
Sbjct: 478 KFGIEPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIE-WAALLGACKKHGNV 533
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 136/297 (45%), Gaps = 20/297 (6%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
LY+ G +A F ++ ++N +I A LF +P+ +V S+ ++
Sbjct: 54 LYSKFGTFSNALTAFHFTGYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTL 113
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
I A+ G C +A+ VF E+ + G + T+ V+ A + D+ + +H FA G+
Sbjct: 114 IAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVE--DVGLVRQLHCFALLCGY 171
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE--RTVVSWSSMIVGFAMHXXXXXXXXXX 182
VCNA++ Y + G L E +RVF M E R +VSW++MIV H
Sbjct: 172 DCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLF 231
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHV-----GLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M R+G++ + T VL A + + G+ G+ + + R+ + G L+
Sbjct: 232 GEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSG------LI 285
Query: 238 DLLSRAGR--LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
DL S+ + E +V + P+ V+W ++ G H++ L E+A+ ++
Sbjct: 286 DLYSKCAPHGMLECMKVFEEIP-KPDLVLWNTMISGFSQHED--LCEDALSSFREMQ 339
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 2/161 (1%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
S G+ HA + +P ++ N +A G + AR +F +MP++N S S+I G
Sbjct: 364 SVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAG 423
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN-GFLR 126
A+ G E+L++F M ++ PN +T ++VL ACA G ++ G+ K G
Sbjct: 424 YAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEP 483
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
+ +ID+ + G L + R+ E M + + W++++
Sbjct: 484 EAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALL 524
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/468 (39%), Positives = 282/468 (60%), Gaps = 4/468 (0%)
Query: 2 LLHLYASCGETRHARLMFD--KMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
L+ +YA G AR + + ++ + ++ + +G V AR++F S+ R+V
Sbjct: 316 LISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVV 375
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+WT++I G A+ + ++AL++F M +G +PN T+ AVL + L L+ GK +H A
Sbjct: 376 AWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIA 435
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-RERTVVSWSSMIVGFAMHXXXXXX 178
+ +V V NALI MY K GC+++ +VF + ER ++W+SMI+ A H
Sbjct: 436 IRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEA 495
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M++ +KP+++T++GVL AC+HVGLV++G+ +M+ + I P HY C++D
Sbjct: 496 IELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMID 555
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
L RAG +EEA I M + P+ + WG+LL CR+HKN+ LA+ A L +D N G
Sbjct: 556 LFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPNNSGA 615
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
Y ++N ++ G+WEE +++R+LM+ R VKK G S + I VH F D HPQ I
Sbjct: 616 YSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQRDAI 675
Query: 359 FEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIR 418
+ M K+ ++K G+ PDT VL DL D + KE L HSEKLA+ + LIN+ ++R
Sbjct: 676 YRMISKIWKEIKKIGFNPDTDSVLHDL-DQEVKEQILSHHSEKLAIAFALINSPGYTTLR 734
Query: 419 IMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IMKNLRVC DCH+A K +S + REI+VRD RFH FKDG+C+C+DYW
Sbjct: 735 IMKNLRVCNDCHSAIKYISMLVGREIIVRDATRFHHFKDGSCSCRDYW 782
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 43/378 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+ Y+ A +F +MPQR +WN +++ G + AR LF +P+ + SW
Sbjct: 51 LLNFYSKTASFNDAHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSW 110
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + G A+ F +M DG P + T VL +C G L+ GK VH F
Sbjct: 111 TTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVK 170
Query: 122 NGFLRNVYVCNALIDMYVKCGC-------------------------------LEEGYRV 150
G V V N+L++MYVK G + +
Sbjct: 171 LGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALAL 230
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGL 209
F+ M +R ++SW+S+I G+ M R +KP+ T VL AC+++
Sbjct: 231 FDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLES 290
Query: 210 VDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP-NRVVWGA 267
+ G+ + I+R D I V + L+ + +++G +E AR ++ N + + +
Sbjct: 291 LKLGKQIHAYIVRADIDISGAVGN--ALISMYAKSGAVEVARTIVELRGTSNINVIAFTS 348
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
LL G ++ A E L D++ + M YA+ ++ + RLM S G
Sbjct: 349 LLNGYVKIGDVNPAREIFDSLKCRDVV---AWTAMIVGYAQNSLLKDALELFRLMISEG- 404
Query: 328 KKTPGCSSITIDGVVHEF 345
P +S T+ V+ F
Sbjct: 405 ---PRPNSYTLAAVLSVF 419
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 148/359 (41%), Gaps = 67/359 (18%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+++ ++ G A +FD+M RDI +WN +IA
Sbjct: 213 IMISMHMQSGRFDVALALFDQMTDRDIISWNSIIA------------------------- 247
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRF- 118
G G +AL+ FS+M + S KP++ T+ +VL ACA L L+ GK +H +
Sbjct: 248 ------GYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYI 301
Query: 119 ---------AKGNGFLR-----------------------NVYVCNALIDMYVKCGCLEE 146
A GN + NV +L++ YVK G +
Sbjct: 302 VRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNP 361
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+F+ ++ R VV+W++MIVG+A + MI G +PN T VL S
Sbjct: 362 AREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSS 421
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
+ +D G+ L I R V V L+ + S++G +++AR+V + + + W
Sbjct: 422 LASLDHGKQLHAIAIR-LKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWT 480
Query: 267 ALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG-YYVVMSNVYAEAGKWEEVSRIRRLMKS 324
+++ H A E + K +L D YV + + G E+ R LMK+
Sbjct: 481 SMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKN 539
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/418 (43%), Positives = 269/418 (64%), Gaps = 2/418 (0%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F +P+++ SW S+I G + G + L F M K+ KP V+ +V+ ACA L L
Sbjct: 285 FYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTAL 344
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G+ +H GF N ++ ++L+DMY KCG ++ VF+ + +R +V+W+++I+G
Sbjct: 345 SLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGC 404
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
AMH M+ G++P YV F+ VL ACSH GLVD+G M RD+GI PG
Sbjct: 405 AMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPG 464
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANM-SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
+EHY + DLL RAGRLEEA + I+NM V P VW LL CR HK++ LAE+ + L
Sbjct: 465 LEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKL 524
Query: 289 SKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAG 348
+D N G YV+MSN+Y+ A +W++ +R+R M+ +G+KKTP CS I + VH F+AG
Sbjct: 525 LSVDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAG 584
Query: 349 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGL 408
D++HP I + + LL +M+ +GY+ DT+ VL D+++ ++E+ L+ HSE+LA+ YG+
Sbjct: 585 DKSHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKREL-LHNHSERLAIAYGI 643
Query: 409 INTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
I+T G +IR++KN+RVC DCH A K +++I REI VRD +RFH FK+G+C+C DYW
Sbjct: 644 ISTTAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 123/234 (52%), Gaps = 3/234 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLV 101
+ + +F MP R+V SW +VI G A+ GM EAL + EM K+G KP+ T+ ++L
Sbjct: 176 IDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILP 235
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
A+ D+ GK +H +A NGF +V++ ++LIDMY KC LE R F + + +S
Sbjct: 236 IFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAIS 295
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
W+S+I G + M++ +KP V+F V+ AC+H+ + GR L +
Sbjct: 296 WNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIV 355
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
R G LVD+ ++ G ++ AR V + + V W A++ GC +H
Sbjct: 356 R-LGFDDNEFIASSLVDMYAKCGNIKMARYVFDRID-KRDMVAWTAIIMGCAMH 407
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG + AR +FD++ +RD M+A W
Sbjct: 369 LVDMYAKCGNIKMARYVFDRIDKRD------MVA-------------------------W 397
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAK 120
T++I G A G +A+ +F M +DG +P V +AVL AC+ G ++ G + + +
Sbjct: 398 TAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMER 457
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR--ERTVVSWSSMIVGFAMH 172
G + A+ D+ + G LEE Y MR + T WS ++ H
Sbjct: 458 DFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAH 511
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 22/231 (9%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+W+S+I + + F+ M PN ++L A L + S+H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 120 KGNGFLRNVYVCNALIDMYVK---CGCLEEGY------------RVFEGMRERTVVSWSS 164
G ++Y+ NALI+ Y K G + + + +VF+ M R VVSW++
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+I GFA + M + G +KP+ T +L + V+KG+ + R+
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGC 272
G V L+D+ ++ RLE + + + P + + W +++ GC
Sbjct: 257 -GFDGDVFIGSSLIDMYAKCNRLECS---LRAFYILPRKDAISWNSIIAGC 303
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/466 (42%), Positives = 286/466 (61%), Gaps = 3/466 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L Y G + A +F+ MP + I N MI G + AR +F M +R+ +W
Sbjct: 244 MLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTW 303
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I + G+ EAL +F+ M+++G N ++++VL CA L L+ G+ VH
Sbjct: 304 NAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVR 363
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ F +++YV + LI MYVKCG L +F + VV W+SMI G++ H
Sbjct: 364 SEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNV 423
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G++P+ VTFIGVL ACS+ G V +G + M+ Y + PG+EHY C+VDLL
Sbjct: 424 FHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLG 483
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAGR++EA E++ M + P+ +VWGALLG CR H + LAE A+ L+KL+ N G YV+
Sbjct: 484 RAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVL 543
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD-ETHPQAKGIFE 360
+S++YA G+W +V +R+ + R V K PGCS I ++ VH F GD ++HP+ I +
Sbjct: 544 LSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQ 602
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
M EKL ++ GY PD S VL D+ D ++K L HSE+LA+ YGL+ GM IR+M
Sbjct: 603 MLEKLSGFLREAGYCPDGSFVLHDV-DEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVM 661
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH+A KL++++ REI++RD NRFH FKDG+C+CKD+W
Sbjct: 662 KNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 31/196 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ Y + R A L+FD+MPQR+ ++N MI+ + G V AR +F MP+RNV SW
Sbjct: 58 MVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSW 117
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK-------------------DGSK------PNE--V 94
TS++ G + GM EEA K+F EM + D +K P + V
Sbjct: 118 TSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVV 177
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
V ++ Q+G L+ + + K +RNV+ ++ Y K G ++ ++FE M
Sbjct: 178 VVTNMIGGYCQVGRLDEARELFDEMK----VRNVFTWTTMVSGYAKNGRVDVARKLFEVM 233
Query: 155 RERTVVSWSSMIVGFA 170
ER VSW++M++G+
Sbjct: 234 PERNEVSWTAMLMGYT 249
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 46/281 (16%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G AR +FD+M R++ TW M++ G V AR LF MP+RN SWT+++
Sbjct: 186 YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAML 245
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G + G +EA ++F M +
Sbjct: 246 MGYTQSGRMKEAFELFEAMP---------------------------------------V 266
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
+ + CN +I + G + +FEGM+ER +W++MI F M
Sbjct: 267 KWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARM 326
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
R G+ N+ + I VL C+ + +D GR + ++R ++ + L+ + + G
Sbjct: 327 QREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFD--QDLYVASVLITMYVKCG 384
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
L A+ + N + + V+W +++ G H L EEA+
Sbjct: 385 DLVRAKGIF-NRFLFKDVVMWNSMITGYSQHG---LGEEAL 421
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 65/339 (19%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLF--SSMPQRNVRSWTSVIYGLAKCGMCEEALKVFS 82
R + + I+ +G + AR +F + +PQR + SW +++ + +AL +F
Sbjct: 17 RSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFD 76
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+M + RN N +I YVK G
Sbjct: 77 QMPQ---------------------------------------RNTVSFNGMISGYVKNG 97
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+ + +VF+ M ER VVSW+SM+ G+ M R N V++ ++
Sbjct: 98 MVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPR----RNVVSWTVMIG 153
Query: 203 ACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
+D + L I +D +V + C V GRL+EARE+ M V N
Sbjct: 154 GLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQV------GRLDEARELFDEMKV-RN 206
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
W ++ G + + +A + + + N+ + M Y ++G+ +E L
Sbjct: 207 VFTWTTMVSGYAKNGRVDVARKLFEVMPE---RNEVSWTAMLMGYTQSGRMKEAF---EL 260
Query: 322 MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++ VK C+ + + +F E H +A+ +FE
Sbjct: 261 FEAMPVKWIVACNEMIL-----QFGLAGEMH-RARMMFE 293
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/467 (40%), Positives = 283/467 (60%), Gaps = 25/467 (5%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
++D N ++ +G + AR +F SM ++++ SW ++I G CG ++AL + +
Sbjct: 422 EKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHD 481
Query: 84 MEKDGS------------------KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
M++ + KPN VT++ VL CA L L GK +H +A
Sbjct: 482 MQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLS 541
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
++V V +AL+DMY KCGCL VFE M R V++W+ +I+ + MH M
Sbjct: 542 KDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRRM 601
Query: 186 IRVG-----MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
+ G ++PN VT+I + + SH G+VD+G L M+ +GI P +HY CLVDLL
Sbjct: 602 VEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLL 661
Query: 241 SRAGRLEEAREVIANMSVPPNRV-VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
R+G++EEA +I M +V W +LLG C++H+N+ + E A ++L LD YY
Sbjct: 662 GRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNVASYY 721
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V++SN+Y+ AG W++ +R+ MK +GV+K PGCS I VH+F+AGD +HPQ+K +
Sbjct: 722 VLLSNIYSSAGLWDQAIDVRKKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVH 781
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRI 419
E E L ++MK +GY+PDTS VL ++ + ++KE L HSE+LA+ +GL+NT PG +IR+
Sbjct: 782 EYLETLSLRMKKEGYVPDTSCVLHNVGE-EEKETMLCGHSERLAIAFGLLNTSPGTTIRV 840
Query: 420 MKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLRVC DCH A K +S+I +REI++RD RFH F++G C+C DYW
Sbjct: 841 AKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 887
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 15/271 (5%)
Query: 29 TWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
T N ++ +G V A+ LF +++ SW ++I L++ EEAL M + G
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-KGNGFLRNVYVCNALIDMYVKCGCLEEG 147
+PN VT+ +VL AC+ L L GK +H F N + N +V AL+DMY C E+G
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKG 342
Query: 148 YRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACSH 206
VF+GM RT+ W++MI G+ + M+ +G+ PN VT VL AC
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402
Query: 207 V-GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+DK +++ +G L+D+ SR GR+E AR + +M+ + V W
Sbjct: 403 CESFLDKEGIHSCVVK--WGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMN-RKDIVSW 459
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
++ G + RH L+LL+D
Sbjct: 460 NTMITGYVV---------CGRHDDALNLLHD 481
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AAR +F + R+ SW S+I + E A+ +F M + P T+V+V
Sbjct: 134 GDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVA 193
Query: 101 VACAQL-GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
AC+ L L GK VH F NG R + NAL+ MY K G + E +F+ ++ +
Sbjct: 194 HACSNLINGLLLGKQVHAFVLRNGDWR-TFTNNALVTMYAKLGRVYEAKTLFDVFDDKDL 252
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW+++I + + M++ G++PN VT VL ACSH+ ++ G+ +
Sbjct: 253 VSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAF 312
Query: 220 MRRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + ++ GC LVD+ + E+ R V M VW A++ G
Sbjct: 313 VLMNNDLIEN-SFVGCALVDMYCNCKQPEKGRLVFDGM-FRRTIAVWNAMIAG 363
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 165/395 (41%), Gaps = 63/395 (15%)
Query: 25 RDIATWNIMIAHLINVGYVGAA--------------RDLFSSMPQRNVRSWTSVIYGLAK 70
++I + +M LI +VG A R +F M +R + W ++I G +
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR 366
Query: 71 CGMCEEALKVFSEMEKD-GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
EA+++F EM + G PN VT+ +VL AC + + +H GF ++ Y
Sbjct: 367 NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKY 426
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-- 187
V NAL+DMY + G +E +F M + +VSW++MI G+ + M R
Sbjct: 427 VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 486
Query: 188 ----------------VGMKPNYVTFIGVLHACSHVGLVDKGR-----ALLTIMRRDYGI 226
+KPN VT + VL C+ + + KG+ A+ ++ +D +
Sbjct: 487 AEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAV 546
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
LVD+ ++ G L +R V MSV N + W L+ +H EEA++
Sbjct: 547 ------GSALVDMYAKCGCLNLSRTVFEQMSV-RNVITWNVLIMAYGMHGK---GEEALK 596
Query: 287 HLSKLDLLNDG---------YYVVMSNVYAEAGKWEEVSRIRRLMKSR-GVKKTPGCSSI 336
++ D Y+ + + +G +E + MK++ G++ T +
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656
Query: 337 TID-----GVVHEFVAGDETHPQAKGIFEMWEKLL 366
+D G + E +T P + W LL
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL 691
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
+A+ ++ M G P+ AVL A A + DL GK +H G V N+ +
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFV 127
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
+MY KCG ++ RVF+ + R VSW+SMI M+ + P
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 196 TFIGVLHACSHV--GLVDKGRALLTIMRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
T + V HACS++ GL+ + ++R D+ LV + ++ GR+ EA+ +
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFTN----NALVTMYAKLGRVYEAKTL 243
Query: 253 I 253
Sbjct: 244 F 244
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/427 (44%), Positives = 270/427 (63%), Gaps = 2/427 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A D+F +M +RNV +WT+++ GL++ G E ALK+F M+++ N VT+V+++
Sbjct: 389 GAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLV 448
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF-EGMRERTV 159
CA LG L+ G+SVH +G+ N +ALIDMY KCG + ++F G + V
Sbjct: 449 HCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDV 508
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+ +SMI+G+ MH MI +KPN TF+ +L ACSH GLV++GR L
Sbjct: 509 ILCNSMIMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHC 568
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M R + I P +HY C VDLLSRAG LEEA ++ + V P+ V ALLGGCR+HKNI
Sbjct: 569 MERVHNIKPSDKHYACFVDLLSRAGYLEEAYALVKQIPVEPSIDVLEALLGGCRIHKNIN 628
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
+ + L LD LN G YV++SN+Y+EA +WE V+ IR LM+ RG+KKTP S +
Sbjct: 629 MGIQIADRLISLDYLNTGIYVMLSNIYSEARRWESVNYIRGLMRKRGLKKTPAFSLTEVG 688
Query: 340 GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHS 399
V F AGD++HP + I ++ E L ++++ GY+ DTS VL D+ + + ++ L+ HS
Sbjct: 689 NQVFTFFAGDDSHPGWENIKQLLENLRLEVEASGYVADTSCVLRDVNETMKVQL-LWGHS 747
Query: 400 EKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGA 459
E+LA+ +GL+NT G IRI KNLR+C DCH K +S+I REI+VRD NRFH F +G
Sbjct: 748 ERLAIAFGLLNTPYGSLIRITKNLRICVDCHTVTKYISKIVKREIIVRDANRFHHFVNGE 807
Query: 460 CTCKDYW 466
C+C DYW
Sbjct: 808 CSCNDYW 814
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
MI L+ G + AR +F MP+R+V W S+I G + G+ +E +++F EM G +P+
Sbjct: 179 MINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPS 238
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
VT+ ++L AC + G + G VH F G +V+V +L+DMY G E + VF
Sbjct: 239 SVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFN 298
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M R+++SW++MI G + +++ G + T + ++ CS ++
Sbjct: 299 RMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLEN 358
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G+ L + R G+ + +VD+ S+ G +++A +V M N + W A+L G
Sbjct: 359 GKVLHACIIRK-GLESNLVLSTAIVDMYSKCGAIKQASDVFRTME-KRNVITWTAMLVG 415
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 139/275 (50%), Gaps = 8/275 (2%)
Query: 8 SCGETRHARL-------MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+CGE+ H +L + D+ ++ NVG +A +F+ M R++ S
Sbjct: 248 ACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLIS 307
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W ++I G + GM E+ +F ++ + G + T+V+++ C+Q DLE GK +H
Sbjct: 308 WNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACII 367
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G N+ + A++DMY KCG +++ VF M +R V++W++M+VG + +
Sbjct: 368 RKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALK 427
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M + N VT + ++H C+H+G + KGR++ + R +G + L+D+
Sbjct: 428 LFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIR-HGYEFNAVNMSALIDMY 486
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
++ G++ A ++ N + ++ +++ G +H
Sbjct: 487 AKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMH 521
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 141/343 (41%), Gaps = 12/343 (3%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
N+G++ A +F P R +++ G K +E K+F M + N T V
Sbjct: 84 NLGFLNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVF 143
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
L AC L D E G + R A GF + +V +++I+ VKCG L + VF+GM ER
Sbjct: 144 GLKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERD 203
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VV W+S+I G+ MI G++P+ VT +L AC G G +
Sbjct: 204 VVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTC-VH 262
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+ G+ V LVD+ G E A V M + + W A++ GC + +
Sbjct: 263 VFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRM-CSRSLISWNAMISGC-VQNGM 320
Query: 279 VLAEEAMRH--LSKLDLLNDGYYVVM-----SNVYAEAGKWEEVSRIRRLMKSRGVKKTP 331
V ++ H + D + G V + E GK IR+ ++S V T
Sbjct: 321 VPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTA 380
Query: 332 GCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 374
+ G + + A D K W +LV + GY
Sbjct: 381 IVDMYSKCGAIKQ--ASDVFRTMEKRNVITWTAMLVGLSQNGY 421
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/473 (41%), Positives = 282/473 (59%), Gaps = 23/473 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGY-------VGAARDLFSSMP 54
L+ +YA CG +AR +FD+M Q ++ WN ++ G G +F M
Sbjct: 154 LISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMK 213
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
R+ SW+++I G AK G +A F E+ +D ++P+EV++ VL ACAQ G EFGK
Sbjct: 214 MRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKI 273
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
+H F + GFL V V NALID Y KCG ++ VF + AMH
Sbjct: 274 LHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN--------------ISLAMHGR 319
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M G++P+ VTFI +L+ACSH GLV++G AL + MR YGI P +EHYG
Sbjct: 320 ADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYG 379
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
C+VDL RA RL++A E I M + PN ++W LLG C +H NI LAE L+++D
Sbjct: 380 CMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPN 439
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 354
N G +V++SNVYA AGKW++V+ IRR M + +KK PG S I ID V + FVAG++ +
Sbjct: 440 NSGDHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEV 499
Query: 355 AKGIFEMWEKLLVKMK-MKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKP 413
K + +++++++ +GY P VL D+E+ ++KE + +HSEKLA +G+
Sbjct: 500 TKEAHDKLREIMLRLREEEGYAPQVRSVLHDVEE-EEKEDSMSKHSEKLAAAFGIAKLPK 558
Query: 414 GMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
G +RI+KNLRVC DCH KL+S++ EI+VRDR+RFH FK G C+C+DYW
Sbjct: 559 GRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKGGFCSCRDYW 611
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/466 (41%), Positives = 280/466 (60%), Gaps = 34/466 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CGE R +RL+FD++ + N SW
Sbjct: 236 LVDMYARCGELRESRLVFDELESK-------------------------------NEVSW 264
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G A+ G EEAL +F +M+++G E T A+L + + G LE GK +H
Sbjct: 265 NALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMK 324
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX-XXXXXX 180
+G YV N L+ MY K G + + +VF+ + + VVS +SM++G+A H
Sbjct: 325 SGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVEL 384
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ V ++PN +TF+ VL ACSH GL+D+G +M++ YG+ P + HY +VDL
Sbjct: 385 FEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLF 443
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG L++A+ I M + PN +WGALLG ++HKN + A + + +LD G +
Sbjct: 444 GRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHT 503
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA AG+W++V+++R+ MK G+KK P CS + I+ VH F A D +HPQ ++E
Sbjct: 504 LLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYE 563
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
MWE L K+K GY+PDTS V + D ++KE+ L HSEKLAL + L+NTKPG IRIM
Sbjct: 564 MWENLNQKIKEIGYVPDTSHVHV-FVDQQEKELNLQYHSEKLALAFALLNTKPGSVIRIM 622
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KN+RVC DCH+A K VS + REI+VRD NRFH F+DG+C+C+DYW
Sbjct: 623 KNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 158/338 (46%), Gaps = 14/338 (4%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ H LM K + D+ N ++ G + AR +F M ++V +WTS+I G +
Sbjct: 110 GKLVHTHLMNSKF-RNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYS 168
Query: 70 KCGMCEEA---LKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
+ G A L +F EM +DG +PNE + +++ C LG GK +H GF
Sbjct: 169 QDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQE 228
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
NV+V ++L+DMY +CG L E VF+ + + VSW+++I GFA M
Sbjct: 229 NVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQ 288
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
R G T+ +L + S G +++G+ L M + + G L+ + +++G +
Sbjct: 289 REGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVG-NTLLHMYAKSGNI 347
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-----NDGYYVV 301
+A++V + V + V ++L G H L +EA+ ++ L ND ++
Sbjct: 348 CDAKKVFDRL-VKVDVVSCNSMLIGYAQHG---LGKEAVELFEEMMLWVEIEPNDITFLS 403
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
+ + AG +E LMK G++ + +D
Sbjct: 404 VLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVD 441
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
L V + +P+ +L C LG L+ GK VH + F ++ + N+++
Sbjct: 75 GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX---XMIRVGMKPN 193
MY KCG LE +VF+ M + VV+W+SMI G++ M+R G++PN
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
++ C +G G+ + + YG V LVD+ +R G L E+R V
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWK-YGFQENVFVGSSLVDMYARCGELRESRLVF 253
Query: 254 ANMSVPPNRVVWGALLGG 271
+ N V W AL+ G
Sbjct: 254 DELE-SKNEVSWNALISG 270
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/464 (39%), Positives = 278/464 (59%), Gaps = 9/464 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +YA CG+T A L+F MP R+ +W MI G +G AR F MP+RN+ +W
Sbjct: 420 IITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTW 479
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ + G EE LK++ M +G +P+ +T + ACA L ++ G V A
Sbjct: 480 NSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATK 539
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G NV V N+++ MY +CG ++E F+ + ++ ++SW++M+ FA +
Sbjct: 540 FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDT 599
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M++ KPN+++++ VL CSH+GLV +G+ M R +GI P EH+ C+VDLL
Sbjct: 600 FEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLG 659
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG LE+A+++I M PN VW ALLG CR+H ++ LAE A + L +LD+ YV+
Sbjct: 660 RAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVL 719
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+Y+E+G+ + V+ +R+LMK +G++ + GCS I +D VH F + +HPQ K E+
Sbjct: 720 LSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIK---EV 776
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
+ KL MKM I DT + + + + HSEKLA +GL+N M I +MK
Sbjct: 777 YLKLEEMMKM---IEDTGKYITVESSVHRSKKY---HSEKLAFAFGLLNLPSWMPIHVMK 830
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
NLRVC+DCH KL+S + +RE+++RD RFH FKDG C+CKDY
Sbjct: 831 NLRVCDDCHLVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 41/306 (13%)
Query: 4 HLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR--NVRSW 61
H+Y++CG T A +F + R+I TWN MI L++ + A LF MP R + SW
Sbjct: 51 HMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSW 110
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKD----GSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
T++I G ++ G + + FS M +D G + + +V+ AC LGD +H
Sbjct: 111 TTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHA 170
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLE---------------------EGY-------- 148
GF + N+++ MYVKCG ++ GY
Sbjct: 171 LVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYK 230
Query: 149 --RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
++F M ER VSW+++I F+ H M G PN++T+ VL AC+
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACAS 290
Query: 207 VGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+ G L I+R ++ + + L+D+ ++ G L+ A+ V ++ + + W
Sbjct: 291 TSDLKWGAHLHARILRMEHSL--DLVFGNGLIDMYAKCGCLDLAKRVFKSLR-EHDHISW 347
Query: 266 GALLGG 271
+L+ G
Sbjct: 348 NSLITG 353
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 145/329 (44%), Gaps = 15/329 (4%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
+Y CG+ A +F + + + WN MI + A +F+ MP+R+ SW ++
Sbjct: 190 MYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTL 249
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAKGNG 123
I ++ G + L +F EM G PN +T +VL ACA DL++G +H R +
Sbjct: 250 ISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEH 309
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
L V+ N LIDMY KCGCL+ RVF+ +RE +SW+S+I G
Sbjct: 310 SLDLVF-GNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFN 368
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG----CLVDL 239
M R + + +L CS G L Y I G+ ++ +
Sbjct: 369 QMRRSSVVLDEFILPTILGVCSGPDYASTGELL-----HGYTIKSGMGSSAPVGNAIITM 423
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
++ G ++A V M + N + W A++ +I A + + +++ +
Sbjct: 424 YAKCGDTDKADLVFRLMPL-RNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVT---W 479
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
M + Y + G EE ++ M+S GV+
Sbjct: 480 NSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 132/294 (44%), Gaps = 36/294 (12%)
Query: 10 GETRHARLMFDKMPQR-DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G HAR++ +M D+ N +I G + A+ +F S+ + + SW S+I G+
Sbjct: 297 GAHLHARIL--RMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGV 354
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
G+ E+AL +F++M + +E + +L C+ G+ +H + +G +
Sbjct: 355 VHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSA 414
Query: 129 YVCNALIDMYVKCGCLEEG---YRV----------------------------FEGMRER 157
V NA+I MY KCG ++ +R+ F+ M ER
Sbjct: 415 PVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPER 474
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+V+W+SM+ + + M G++P+++TF + AC+ + +V G ++
Sbjct: 475 NIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVV 534
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
T + +G+ V +V + SR G ++EA+ ++ + + W A+L
Sbjct: 535 THATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAA 586
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 370 bits (949), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/465 (40%), Positives = 277/465 (59%), Gaps = 33/465 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A +FDK+ RD WN M+A
Sbjct: 189 LIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLA-------------------------- 222
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
A+ G +E++ + EM +G +P E T+V V+ + A + L +G+ +H F
Sbjct: 223 -----AYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWR 277
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+GF N V ALIDMY KCG ++ +FE +RE+ VVSW+++I G+AMH
Sbjct: 278 HGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDL 337
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M R +P+++TF+GVL ACS L+D+GRAL +M RDYGI P V+HY C++DLL
Sbjct: 338 FDKM-RKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLG 396
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
G+L+EA ++I NMSV P+ VWGALL C++H N+ LAE A+ L +L+ + G YV+
Sbjct: 397 HCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVI 456
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
++N+YA++GKWE V ++R++M + +KK CS I + V+ F+AGD +H + I+
Sbjct: 457 LANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAE 516
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
++L M GY PDT V D+E+ +K + HSE+LA+ +GLI+T PG + I K
Sbjct: 517 LKRLEGLMHEAGYAPDTGSVFHDVEE-DEKTSMVCSHSERLAIAFGLISTSPGTRLLITK 575
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLR+CEDCH A K +S+I REI VRD NR+H FK G C+C D+W
Sbjct: 576 NLRICEDCHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR+LF +P++N+ W +I G A G + A+ ++ +M G +P+ T+ VL AC+
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L + G+S+H + +G+ R+++V ALIDMY KCGC+ + RVF+ + R V W+SM
Sbjct: 161 LSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSM 220
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ +A + M G++P T + V+ + + V + GR + R +G
Sbjct: 221 LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWR-HG 279
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGGCRLHKNIVLAEEA 284
+ L+D+ ++ G ++ A + + RVV W A++ G +H V A +
Sbjct: 280 FQSNDKVKTALIDMYAKCGSVKVALALFERLR--EKRVVSWNAIITGYAMHGLAVGALDL 337
Query: 285 MRHLSKLD 292
+ K D
Sbjct: 338 FDKMRKED 345
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 88/218 (40%), Gaps = 14/218 (6%)
Query: 62 TSVIYGLAKCGMC-EEALKVFSEMEKDGSKPNEVT---VVAVLVACAQLGDLEFGKSVHR 117
TS I+ L +L D P T ++L +C L GK +H
Sbjct: 12 TSFIFNLFPFSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHA 71
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
G N + L+ +Y L +F+ + ++ + W+ +I G+A +
Sbjct: 72 QFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDN 131
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY---- 233
M+ G++P+ T VL ACS + + +GR++ +Y I G E
Sbjct: 132 AIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI-----HEYVIKSGWERDLFVG 186
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+D+ ++ G + +A V + V + V+W ++L
Sbjct: 187 AALIDMYAKCGCVMDAGRVFDKIVV-RDAVLWNSMLAA 223
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 368 bits (944), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/469 (41%), Positives = 276/469 (58%), Gaps = 34/469 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA C AR MFD++ +D R+V +W
Sbjct: 299 LIDMYAKCKSLEVARAMFDEICPKD-----------------------------RDVVTW 329
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
T +I G A+ G AL++FSEM K + PN+ T+ VL++CA+L L FGK +H +
Sbjct: 330 TVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYV 389
Query: 120 KGNGFLRN--VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ + ++V N LIDMY K G ++ VF+ M +R VSW+S++ G+ MH
Sbjct: 390 LRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSED 449
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M + + P+ +TF+ VL+ACSH G+VD+G L M +D+G+ PGVEHY C+V
Sbjct: 450 AFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFYRMSKDFGVDPGVEHYACMV 509
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DLL RAGRL EA +I +MS+ P VVW +LL CR H NI LAE A + L +L NDG
Sbjct: 510 DLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACRTHSNIELAEFAAKKLLELKADNDG 569
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
Y ++SN+YA A +W++V+RIR LMK G+KK PG S + + F GD TH Q+
Sbjct: 570 TYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSLK 629
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI 417
I+E L+ ++K GY+P T+ L D++D ++ + L HSEKLAL Y ++ PG I
Sbjct: 630 IYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLL-EHSEKLALAYAILTLPPGAPI 688
Query: 418 RIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
RI KNLR+C DCH+A +S I EI++RD +RFH FK+G+C+CK YW
Sbjct: 689 RITKNLRICGDCHSAITYISMIVEHEIILRDSSRFHHFKNGSCSCKGYW 737
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 17/312 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS- 60
L+ +YA CG+ A +F++M +D+ TWN M+ G A LF M + + S
Sbjct: 156 LVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESD 215
Query: 61 ---WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
W+SVI G A+ G EA+ VF +M +PN VT++++L ACA +G L GK H
Sbjct: 216 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHC 275
Query: 118 FA-----KG--NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVG 168
++ KG N ++ V NALIDMY KC LE +F+ + ++R VV+W+ MI G
Sbjct: 276 YSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGG 335
Query: 169 FAMHXXXXXXXXXXXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYG 225
+A H M ++ + PN T VL +C+ + ++ G+ + ++RR
Sbjct: 336 YAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLI 395
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ CL+D+ S++G ++ A+ V +MS N V W +LL G +H A
Sbjct: 396 YSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGRSEDAFRVF 454
Query: 286 RHLSKLDLLNDG 297
+ K L+ DG
Sbjct: 455 DEMRKEALVPDG 466
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 138/335 (41%), Gaps = 73/335 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y C HAR +FD++ R I + +W
Sbjct: 51 VISMYGKCKAVVHARKVFDELCYRGIC----------------------------DSVTW 82
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKD-GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
S++ + C + A+ +F EM G P+ V VV +L C LG G+ VH F
Sbjct: 83 NSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCV 142
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR------------------------- 155
+G + +V+V NAL+DMY KCG +E+ +VFE MR
Sbjct: 143 RSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALS 202
Query: 156 ----------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E VV+WSS+I G+A M +PN VT + +L AC+
Sbjct: 203 LFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACA 262
Query: 206 HVGLVDKGR-----ALLTIMRRDYG-IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 259
VG + G+ ++ I++ ++ + L+D+ ++ LE AR + + P
Sbjct: 263 SVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEI-CP 321
Query: 260 PNR--VVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
+R V W ++GG H + A + + K+D
Sbjct: 322 KDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKID 356
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ T V AC ++ + E G S+H GF NV+VCNA+I MY KC + +V
Sbjct: 8 PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKV 67
Query: 151 FEGMRERTV---VSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSH 206
F+ + R + V+W+S++ ++ M + G+ P+ V + +L C +
Sbjct: 68 FDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGY 127
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
+GL GR + R G+V V LVD+ ++ G++E+A +V M + V W
Sbjct: 128 LGLGLCGRQVHGFCVRS-GLVEDVFVGNALVDMYAKCGKMEDANKVFERMRF-KDVVTWN 185
Query: 267 ALLGG 271
A++ G
Sbjct: 186 AMVTG 190
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/443 (42%), Positives = 264/443 (59%), Gaps = 3/443 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I +G + AR +F M R+V SWTS+I G + EA+++F M
Sbjct: 130 DLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRML 189
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ G NE TV++VL CA G L G+ VH K G VC ALI MY KCGCLE
Sbjct: 190 EVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLE 249
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
VF+ + +R V W++MI G A H M +KP+ T + VL A
Sbjct: 250 SAREVFDDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYR 309
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+ GLV +G +++ Y + P ++H+GC+VDLL++ G LEEA + I M + P+ V+W
Sbjct: 310 NAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIW 369
Query: 266 GALLGGCRLHKNIVLAEEAMRH--LSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
L+ C++H + AE M+H L + + G Y++ SNVYA GKW + + +R LM
Sbjct: 370 RTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMN 429
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
+G+ K PG S I +DGVVHEFV GD HP + IF ++++ K++ +GY P S V+L
Sbjct: 430 KKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMVDKLRKEGYNPKVSEVML 489
Query: 384 DLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENRE 443
+++D ++K I L HSEKLAL YGLI T PG IRI+KNLR CEDCH KL+S++ R+
Sbjct: 490 EMDD-EEKAIQLLHHSEKLALAYGLIRTCPGSKIRIVKNLRSCEDCHEFMKLISKVYQRD 548
Query: 444 IVVRDRNRFHCFKDGACTCKDYW 466
I+VRDR RFH FK+G C+CKDYW
Sbjct: 549 IIVRDRIRFHHFKNGDCSCKDYW 571
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 113/241 (46%), Gaps = 8/241 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE---EALKVFSEM---EKDGSKPNEV 94
G + AR L ++ P N + ++I + +AL +F M + KP+
Sbjct: 38 GDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTF 97
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
T L +C +L + K +H F GF ++Y+ NALI MY + G L +VF+ M
Sbjct: 98 TYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRM 157
Query: 155 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR 214
R VVSW+SMI GF H M+ VG+ N T I VL C+ G + GR
Sbjct: 158 SHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGR 217
Query: 215 ALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRL 274
+ I+ ++ GI L+ + S+ G LE AREV ++ + + VW A++ G
Sbjct: 218 KVHGIV-KEKGIDFKANVCTALIHMYSKCGCLESAREVFDDV-LDRDVFVWTAMIYGLAC 275
Query: 275 H 275
H
Sbjct: 276 H 276
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/426 (42%), Positives = 261/426 (61%), Gaps = 1/426 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + + LF +P RN +W ++I G + G E A+ +F+ M + +P EVT +VL
Sbjct: 387 GEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVL 446
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A A L LE G +H + ++ V N+LIDMY KCG + + F+ M +R V
Sbjct: 447 RASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEV 506
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++MI G++MH M KPN +TF+GVL ACS+ GL+ KG+A M
Sbjct: 507 SWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESM 566
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+DY I P +EHY C+V LL R GR +EA ++I ++ P+ +VW ALLG C +HK + L
Sbjct: 567 SKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDL 626
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
+H+ +++ +D +V++SN+YA AG+W+ V+ +R+ M+ + V+K PG S + G
Sbjct: 627 GRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQG 686
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
VVH F GD +HP K I M E L K + GY+PD + VLLD++D +KE L+ HSE
Sbjct: 687 VVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQD-DEKERHLWVHSE 745
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
+LAL YGLI T SIRI+KNLR+C DCH KL+S++ REIV+RD NRFH F+ G C
Sbjct: 746 RLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVC 805
Query: 461 TCKDYW 466
+C DYW
Sbjct: 806 SCGDYW 811
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 119/240 (49%), Gaps = 12/240 (5%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A+ LF MP+ ++ W+ +I A+ +EAL +F M + PN T +VL
Sbjct: 286 GEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVL 345
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L+ GK +H G NV+V NA++D+Y KCG +E ++FE + +R V
Sbjct: 346 QACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDV 405
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-----RA 215
+W+++IVG+ M+ M+P VT+ VL A + + ++ G
Sbjct: 406 TWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLT 465
Query: 216 LLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ T+ +D + L+D+ ++ GR+ +AR M+ + V W A++ G +H
Sbjct: 466 IKTMYNKDTVVA------NSLIDMYAKCGRINDARLTFDKMN-KRDEVSWNAMICGYSMH 518
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V AR +F + +++ SWT ++ A+ EE+L++F++M G KPN T+ L
Sbjct: 185 GNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGAL 244
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+C L GKSVH A + +++V AL+++Y K G + + R+FE M + ++
Sbjct: 245 KSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLI 304
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
WS MI +A M + + PN TF VL AC+ +D G+ + + +
Sbjct: 305 PWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCV 364
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ +G+ V ++D+ ++ G +E + ++ + N V W ++ G
Sbjct: 365 LK-FGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELP-DRNDVTWNTIIVG 413
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 134/336 (39%), Gaps = 36/336 (10%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ NI++ + + A LF MPQ N S+ ++ G ++ +AL +
Sbjct: 69 DLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIF 128
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
K+G + N +L + ++H G + +V ALID Y G ++
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVD 188
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL---- 201
VF+ + + +VSW+ M+ +A + M +G KPN T G L
Sbjct: 189 VARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCL 248
Query: 202 -----------HACSHVGLVDK----GRALLTIMRRDYGIV---------PGVE--HYGC 235
H C+ G D G ALL + + I+ P + +
Sbjct: 249 GLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSL 308
Query: 236 LVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
++ +++ R +EA ++ M SV PN + ++L C ++ L ++ + K
Sbjct: 309 MIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFG 368
Query: 293 LLNDGYYV--VMSNVYAEAGKWEEVSRIRRLMKSRG 326
LN +V + +VYA+ G+ E ++ + R
Sbjct: 369 -LNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 31/113 (27%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG ARL FDKM +RD +WN MI
Sbjct: 480 LIDMYAKCGRINDARLTFDKMNKRDEVSWNAMIC-------------------------- 513
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
G + GM EAL +F M+ KPN++T V VL AC+ G L G++
Sbjct: 514 -----GYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQA 561
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 265/444 (59%), Gaps = 2/444 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+R + ++ + +G A +F + +++ +W++++ G A+ G EEA K+F +
Sbjct: 425 ERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQ 484
Query: 84 MEKDGSKPNEVTVVAVLVACAQ-LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+ K+G KPNE T +V+ ACA E GK H +A + V +AL+ MY K G
Sbjct: 485 LIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRG 544
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
++ + VF+ +ER +VSW+SMI G++ H M + M + VTFIGV+
Sbjct: 545 NIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVIT 604
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
AC+H GLV+KG+ M D+ I P ++HY C++DL SRAG LE+A +I M PP
Sbjct: 605 ACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGA 664
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
VW LLG R+H+N+ L E A L L + YV++SN+YA AG W+E + +R+LM
Sbjct: 665 TVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLM 724
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
R VKK PG S I + + F+AGD THP + I+ +L +++K GY PDT V
Sbjct: 725 DKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVF 784
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
D+ED +QKE L HSE+LA+ +GLI T P + I+I+KNLRVC DCH KLVS +E R
Sbjct: 785 HDIED-EQKETILSHHSERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQR 843
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
IVVRD NRFH FKDG C+C DYW
Sbjct: 844 YIVVRDSNRFHHFKDGLCSCGDYW 867
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 112/233 (48%), Gaps = 7/233 (3%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
V R +F M +RNV SWTS++ G + G+ ++F +M+ +G PN TV V+ A
Sbjct: 144 VNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAA 203
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
G + G VH +GF + V N+LI +Y + G L + VF+ M R V+W
Sbjct: 204 LVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTW 263
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR- 221
+SMI G+ + M G+KP ++TF V+ +C+ + + AL+ +M+
Sbjct: 264 NSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASL----RELALVKLMQC 319
Query: 222 --RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
G L+ LS+ +++A + + M N V W A++ GC
Sbjct: 320 KALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGC 372
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 16/254 (6%)
Query: 46 ARDLFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
A LFS M + +NV SWT++I G + G ++A+ +FS+M ++G KPN T A+L
Sbjct: 349 ALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHY 408
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+ F +H + R+ V AL+D YVK G + +VFE + + +++WS+
Sbjct: 409 PV----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSA 464
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC-SHVGLVDKGRALLTIMRRD 223
M+ G+A +I+ G+KPN TF V++AC S ++G+
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQF-----HA 519
Query: 224 YGIVPGVEHYGC----LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
Y I + + C LV + ++ G ++ A EV + V W +++ G H
Sbjct: 520 YAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQHGQAK 578
Query: 280 LAEEAMRHLSKLDL 293
A E + K ++
Sbjct: 579 KALEVFDEMQKRNM 592
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%), Gaps = 4/228 (1%)
Query: 46 ARDLFSSMPQR--NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC 103
A +LF +P R ++ +++ ++ +EAL +F + +P+E T+ V C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
A D + G+ VH G + +V V +L+DMY+K + +G RVF+ M ER VVSW+
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
S++ G++ + M G+ PN T V+ A + G+V G + ++ +
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVK- 222
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+G + + L+ L SR G L +AR+V M + + V W +++ G
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI-RDWVTWNSMIAG 269
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ I +N +I+ +G + ARD+F M R+ +W S+I G + G E ++F++
Sbjct: 226 EEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNK 285
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M+ G KP +T +V+ +CA L +L K + A +GF + V AL+ KC
Sbjct: 286 MQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKE 345
Query: 144 LEEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
+++ +F M E + VVSW++MI G + M R G+KPN+ T+ +L
Sbjct: 346 MDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAIL 404
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 277/442 (62%), Gaps = 2/442 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I G + A D+F+ M +++V SW+++I A M E L + +M
Sbjct: 6 DVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMS 65
Query: 86 KDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+G + E T+V VL AC LG + GK +H N NV V +LIDMYVK GCL
Sbjct: 66 SEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCL 125
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
E+G RVF+ M E+ S++ MI G A+H MI G+ P+ V ++GV AC
Sbjct: 126 EKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSAC 185
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
SH GLV++G M+ ++ I P V+HYGC+VDLL R G L+EA E+I +MS+ PN V+
Sbjct: 186 SHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVI 245
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
W +LL C++H N+ + + A +L L+ N G Y+V++N+YA+A KW++V++IR +
Sbjct: 246 WRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAE 305
Query: 325 RGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLD 384
R + +TPG S I V++FV+ D++ PQ I+EM ++ ++K +GYIPDTS VLLD
Sbjct: 306 RNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQVLLD 365
Query: 385 LEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREI 444
++D ++KE + HS+KLA+ +GLI+T G +RI +NLR+C DCH K +S I REI
Sbjct: 366 VDDEEKKERLKF-HSQKLAIAFGLIHTSEGSPLRITRNLRMCSDCHTYTKYISMIYEREI 424
Query: 445 VVRDRNRFHCFKDGACTCKDYW 466
VRDR RFH FK+G+C+CKDYW
Sbjct: 425 TVRDRLRFHHFKNGSCSCKDYW 446
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
G +V V N+LI+MY KCG ++ VF GM E++V SWS++I A
Sbjct: 2 GLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLL 61
Query: 183 XXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G + T + VL AC+H+G D G+ + I+ R+ + V L+D+
Sbjct: 62 GKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTS-LIDMYV 120
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
++G LE+ V NMS NR + ++ G +H +EA++ S++
Sbjct: 121 KSGCLEKGLRVFKNMS-EKNRYSYTVMISGLAIHGR---GKEALKVFSEM 166
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 13/158 (8%)
Query: 25 RDIATWNI-----MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALK 79
R+I+ N+ +I + G + +F +M ++N S+T +I GLA G +EALK
Sbjct: 102 RNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALK 161
Query: 80 VFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG----KSVHRFAKGNGFLRNVYVCNALI 135
VFSEM ++G P++V V V AC+ G +E G KS+ K +++ Y C ++
Sbjct: 162 VFSEMIEEGLAPDDVVYVGVFSACSHAGLVEEGLQCFKSMQFEHKIEPTVQH-YGC--MV 218
Query: 136 DMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
D+ + G L+E Y + + M + V W S++ +H
Sbjct: 219 DLLGRFGMLKEAYELIKSMSIKPNDVIWRSLLSACKVH 256
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/450 (42%), Positives = 275/450 (61%), Gaps = 8/450 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFS 82
+ D N +I + GY+ AR +F M + RNV SW +I AK G + L +F
Sbjct: 117 ELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFC 176
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK---GNGFLRNVYVCNALIDMYV 139
EM K +P+ T+ +V+ AC LG L G VH F + +V V L+DMY
Sbjct: 177 EMMK-VYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYC 235
Query: 140 KCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFI 198
KCG LE +VFEGM R V SW+S+I+GFA+H M++V + PN +TF+
Sbjct: 236 KCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFV 295
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
GVL AC+H G+VD+G +M ++Y + P + HYGCLVDL +RAG ++EA V++ M +
Sbjct: 296 GVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPI 355
Query: 259 PPNRVVWGALLGGC-RLHKNIVLAEEAMRHLSKLD-LLNDGYYVVMSNVYAEAGKWEEVS 316
P+ V+W +LL C + H ++ L+EE + + + + + G YV++S VYA A +W +V
Sbjct: 356 KPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVG 415
Query: 317 RIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIP 376
+R+LM +GV K PGCS I I+G HEF AGD HPQ+K I++ ++ K++ GY+P
Sbjct: 416 LLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLESVGYLP 475
Query: 377 DTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLV 436
D S L E + K+ + HSE+LA+ +GL+N+KP M IR+ KNLRVC DCH KL+
Sbjct: 476 DYSGAPLIDEINEGKQNTMRLHSERLAIAFGLLNSKPSMPIRVFKNLRVCNDCHKVTKLI 535
Query: 437 SEIENREIVVRDRNRFHCFKDGACTCKDYW 466
S I N EI+VRDR RFH FKDG+C+C DYW
Sbjct: 536 SRIYNVEIIVRDRVRFHHFKDGSCSCMDYW 565
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 34 IAHLIN----VGYVGAAR-DLFSSMPQRNVRSWTSVIYGLAKCGMCEEA----LKVFSEM 84
I HL+N + +V + ++ N +W +I +K + ++ K
Sbjct: 17 INHLLNQSNSISHVKQIHAQILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITE 76
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+++ P++ T VL ACA L L GK VH GF + Y+CN+LI Y CG L
Sbjct: 77 QENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYL 136
Query: 145 EEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
E +VF+ M E R VVSW+ MI +A M++V +P+ T V+ A
Sbjct: 137 ETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRA 195
Query: 204 CSHVGLVDKGRAL--LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
C +G + G + + + D +V V CLVD+ + G LE A++V MS +
Sbjct: 196 CGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSY-RD 254
Query: 262 RVVWGALLGGCRLH 275
W +++ G +H
Sbjct: 255 VSSWNSIILGFAVH 268
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/454 (41%), Positives = 274/454 (60%), Gaps = 24/454 (5%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D++ N + + G V R +F + +++ +W ++I G A+ G L+++ E
Sbjct: 193 ENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYRE 252
Query: 84 MEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
M K G P+ VT++ VL +CA LG G+ V + GF N ++ NALI+MY +CG
Sbjct: 253 MRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYARCG 312
Query: 143 CLEEGYRVFEGMRERT--VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGV 200
L VF+ M ER+ VVSW+++I G+ +H M+R G+KP+ F+ V
Sbjct: 313 NLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSV 372
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
L ACSH GL +KG M R YG+ PG EHY CLVDLL R+GRL+EA ++I M V P
Sbjct: 373 LSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDLMKVKP 432
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
+ VWGALLG C++H+N+ LAE A +H+ +L+ N GYYV++SN+Y++ E V ++R
Sbjct: 433 DGPVWGALLGACKIHRNVELAEVAFQHVIELEPTNIGYYVLLSNLYSDTKNLEGVLKVRV 492
Query: 321 LMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL--LVK------MKMK 372
+M+ R ++K PGCS + G +H F +GD +HPQ+K I+ M +L LVK K +
Sbjct: 493 MMRDRNLRKDPGCSYVEYKGKMHLFYSGDTSHPQSKEIYRMLNELENLVKDIHGKDHKCQ 552
Query: 373 GYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAA 432
G +++ I HSEKLA+ + L+NTKPG I +MKNLRVC DCH
Sbjct: 553 G-------------KSEEPLIGAGVHSEKLAIAFALLNTKPGTDITVMKNLRVCVDCHVF 599
Query: 433 FKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
FKLVS+I +R+ +VRD RFH FK+G C+CKDYW
Sbjct: 600 FKLVSKIVDRQFIVRDATRFHRFKNGVCSCKDYW 633
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 4/255 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
Q D T + +I AR +F P S+ ++I G M EA+K+F
Sbjct: 91 QPDPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRR 150
Query: 84 ME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
M ++ N VT++ ++ L G +H GF ++ V N+ + MYVKCG
Sbjct: 151 MLCENRFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCG 210
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVL 201
+E G +VF+ + + +++W++MI G+A + M +V G+ P+ VT +GVL
Sbjct: 211 EVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVL 270
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
+C+++G GR + + R +G L+++ +R G L AREV M
Sbjct: 271 CSCANLGAQGIGREVEKEIDR-FGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSK 329
Query: 262 RVV-WGALLGGCRLH 275
VV W A++GG +H
Sbjct: 330 SVVSWTAIIGGYGIH 344
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/439 (40%), Positives = 269/439 (61%), Gaps = 2/439 (0%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+D+ N ++ +GY+ A +F +P+++ SW +++ G + G+ EA+ ++ M
Sbjct: 357 KDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMM 416
Query: 85 EK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
E+ + PN+ T V+++ A + +G L+ G +H N +V+V LID+Y KCG
Sbjct: 417 EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
LE+ +F + T V W+++I +H M+ +K +++TF+ +L A
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH GLVD+G+ IM+++YGI P ++HYGC+VDLL RAG LE+A E++ NM + P+
Sbjct: 537 CSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
+WGALL C+++ N L A L ++D N GYYV++SN+YA KWE V ++R L +
Sbjct: 597 IWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLAR 656
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
RG++KTPG SS+ + F G++THP+ I++ + L KMK GY+PD S V
Sbjct: 657 DRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQ 716
Query: 384 DLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENRE 443
D+E+ +KE L HSE+LA+ +G+I+T P IRI KNLRVC DCH A K +S I RE
Sbjct: 717 DIEE-DEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISERE 775
Query: 444 IVVRDRNRFHCFKDGACTC 462
IVVRD NRFH FKDG C+C
Sbjct: 776 IVVRDSNRFHHFKDGICSC 794
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 143/294 (48%), Gaps = 18/294 (6%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A +F MP ++V SW ++I G + G AL V + M+ +G K + +TV ++L
Sbjct: 170 GVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASIL 229
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
CAQ D+ G +H +G +V+V NALI+MY K G L++ VF+ M R +V
Sbjct: 230 PVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLV 289
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-I 219
SW+S+I + + M G++P+ +T + + S + R++L +
Sbjct: 290 SWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFV 349
Query: 220 MRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHK 276
+RR D +V G LV++ ++ G + A V + + + W L+ G +
Sbjct: 350 IRREWLDKDVVIG----NALVNMYAKLGYMNCAHTVFDQLP-RKDTISWNTLVTG---YT 401
Query: 277 NIVLAEEAMRHLSKLD-----LLNDGYYVVMSNVYAEAGKWEEVSRIR-RLMKS 324
LA EA+ + ++ + N G +V + Y+ G ++ +I +L+K+
Sbjct: 402 QNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN 455
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 15/267 (5%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I G + A+ +F M R++ SW S+I + AL+ F M+
Sbjct: 256 DVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQ 315
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL-RNVYVCNALIDMYVKCGCL 144
G +P+ +TVV++ +QL D +S+ F +L ++V + NAL++MY K G +
Sbjct: 316 LGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYM 375
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHA 203
+ VF+ + + +SW++++ G+ + M PN T++ ++ A
Sbjct: 376 NCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPA 435
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA----REVIANMSVP 259
SHVG + +G + + ++ + V CL+DL + GRLE+A E+ + SVP
Sbjct: 436 YSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP 494
Query: 260 PNRVVWGALLGGCRLHKNIVLAEEAMR 286
W A++ +H EEA++
Sbjct: 495 -----WNAIIASLGIHGR---GEEALQ 513
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%), Gaps = 13/245 (5%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEAL----KVFSEMEK 86
N+ + H G + +R F + ++N+ SW S+I + G EA+ ++FS
Sbjct: 62 NLYVTH----GDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGG 117
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
+P+ T +L AC L D GK VH GF +V+V +L+ +Y + G L+
Sbjct: 118 GHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDV 174
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
++VF M + V SW++MI GF + M G+K + +T +L C+
Sbjct: 175 AHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQ 234
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
V G L+ + +G+ V L+++ S+ GRL++A+ V M V + V W
Sbjct: 235 SDDVING-VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV-RDLVSWN 292
Query: 267 ALLGG 271
+++
Sbjct: 293 SIIAA 297
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/469 (38%), Positives = 276/469 (58%), Gaps = 7/469 (1%)
Query: 3 LHLYASCGETRHARL---MFDKMP-QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNV 58
LH ++ G+ + + D+M +++ N +I+ V A +F ++ +
Sbjct: 344 LHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN 403
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
+W ++I G A+ G EAL +F M+ G KP+ T V+V+ A A L K +H
Sbjct: 404 VTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGL 463
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
A NV+V AL+DMY KCG +E +F+ M+ER V++W++MI G+ H
Sbjct: 464 AIRTNMDTNVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAA 523
Query: 179 XXXXXXMI-RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M +KPN +TF+ V+ ACSH G V++G IM+ YG+ P ++HYG +V
Sbjct: 524 LDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMV 583
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DLL RAG+L++A + I M + P V GA+LG C++HKNI L E+A L +LD G
Sbjct: 584 DLLGRAGKLDDAWKFIHEMPIKPGITVLGAMLGACKIHKNIELGEKAADRLFELDPDEGG 643
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
YY++++N+YA A W++V+++R M+ +G+ KTPGCS + VH F +G HPQ+K
Sbjct: 644 YYMLVANMYASASMWDKVAKVRTAMEKKGLHKTPGCSLVEWRNEVHAFYSGSTNHPQSKR 703
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI 417
I+ E L +++ GY+PD + D+E+ KE + HSE+LA+ +GL+NT+PG +I
Sbjct: 704 IYAFLETLGDEIRAAGYVPDNDSI-HDVEEY-VKEQLVSSHSERLAIAFGLLNTRPGTTI 761
Query: 418 RIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+ KNLRVC DCH A K +S + REI+VRD RFH FK+G C+C DYW
Sbjct: 762 HVRKNLRVCGDCHEATKYISLVTGREIIVRDLQRFHHFKNGRCSCGDYW 810
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 2/229 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ A +F MP+R++ W +V+ G A+ G +ALK+ +M++DG K + +T+V+VL A
Sbjct: 186 IDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPA 245
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
A + L G+SVH +A GF V V AL+DMY KCG +E G VF+ M + VVSW
Sbjct: 246 VADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSW 305
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+++I G A + M ++P V+ +G LHACS++G +++G+ + ++ +
Sbjct: 306 NTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQ 365
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ V L+ + S+ R++ A V N+ N V W A++ G
Sbjct: 366 -MKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN-VTWNAMILG 412
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 132/265 (49%), Gaps = 16/265 (6%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
RL FD M A ++ G V R +F M +NV SW +VI GLA+ G E
Sbjct: 264 RLGFDSMVNVSTA----LLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESE 319
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
EA F +M ++ +P V+++ L AC+ LGDLE GK VHR NV V N+LI
Sbjct: 320 EAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLI 379
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
MY KC ++ VF+ + +T V+W++MI+G+A + M G+KP+
Sbjct: 380 SMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSF 439
Query: 196 TFIGVLHACSHVGLVDK-----GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
TF+ V+ A + + + + G A+ T M + + LVD+ ++ G +E AR
Sbjct: 440 TFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATA------LVDMYAKCGAIETAR 493
Query: 251 EVIANMSVPPNRVVWGALLGGCRLH 275
E+ +M + + W A++ G H
Sbjct: 494 ELF-DMMQERHVITWNAMIDGYGTH 517
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 2/239 (0%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I+ G + A +F S+ + + +++ G K E+L F M+ D +P
Sbjct: 75 LISLFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPV 134
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+L C + DL+ G VH NGF N++ +++++Y KC +++ Y++F
Sbjct: 135 VYDFTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFV 194
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M ER +V W++++ G+A + M G K + +T + VL A + V +
Sbjct: 195 RMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRI 254
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
GR++ R G V L+D+ + G +E R V MS N V W ++ G
Sbjct: 255 GRSVHGYAVR-LGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMS-SKNVVSWNTVIDG 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 33/155 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG AR +FD M +R + TWN MI
Sbjct: 479 LVDMYAKCGAIETARELFDMMQERHVITWNAMID-------------------------- 512
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
G G+ + AL +F +M+ + S KPN++T ++V+ AC+ G +E G + K
Sbjct: 513 -----GYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMK 567
Query: 121 -GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
G G ++ A++D+ + G L++ ++ M
Sbjct: 568 EGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIHEM 602
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/428 (43%), Positives = 264/428 (61%), Gaps = 3/428 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F +P+R+V S T++I G A+ G+ EEAL++F ++ +G K N VT VL
Sbjct: 190 GKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVL 249
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A + L L+ GK VH + V + N+LIDMY KCG L R+F+ M ERTV+
Sbjct: 250 TALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVI 309
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
SW++M+VG++ H M +KP+ VT + VL CSH GL DKG +
Sbjct: 310 SWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFND 369
Query: 220 MRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
M + P +EHYGC+VDLL R+GR+EEA E I M P +WG+LLG CR+H N+
Sbjct: 370 MSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNV 429
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+ E A + L +++ N G YV++SN+YA AG+WE+VS +R LM + V K PG SSI +
Sbjct: 430 DIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIEL 489
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRH 398
D V+H F A D +HP+ + I ++L K GY+PD S VL D+ D +QKE L H
Sbjct: 490 DQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDV-DEEQKEKILLGH 548
Query: 399 SEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDG 458
SEKLAL +GLI + + IR++KNLR+C DCH K +S++ RE+ +RD+NRFH G
Sbjct: 549 SEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGG 608
Query: 459 ACTCKDYW 466
C+C+DYW
Sbjct: 609 KCSCEDYW 616
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 2/233 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+G A ++F MP+RNV SWT++I ++ G +AL +F +M + G++PNE T VL +
Sbjct: 91 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTS 150
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C G+ +H + +V+V ++L+DMY K G + E VFE + ER VVS
Sbjct: 151 CTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSC 210
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+++I G+A + GMK NYVT+ GVL A S + +D G+ + + R
Sbjct: 211 TAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLR 270
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
I V L+D+ S+ G L +R + M + W A+L G H
Sbjct: 271 S-EIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM-YERTVISWNAMLVGYSKH 321
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 15/200 (7%)
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
A+L C G+ VH +L +V++ LI +Y KC L + + VF+ M ER
Sbjct: 45 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 104
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC-SHVGLVDKGRAL 216
VVSW++MI ++ M+R G +PN TF VL +C S +G + +
Sbjct: 105 NVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIH 164
Query: 217 LTIMRRDY--GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGC 272
I++ +Y + G L+D+ ++ G++ EAR V + P R V A++ G
Sbjct: 165 SLIIKLNYEDHVFVG----SSLLDMYAKDGKIHEARTVFECL---PERDVVSCTAIISG- 216
Query: 273 RLHKNIVLAEEAMRHLSKLD 292
+ + L EEA+ +L
Sbjct: 217 --YAQLGLDEEALELFRRLQ 234
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 13/171 (7%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ H ++ ++P + N +I G + +R +F +M +R V SW +++ G +
Sbjct: 261 GKQVHNHVLRSEIPSF-VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYS 319
Query: 70 KCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
K G E LK+F+ M E+ KP+ VT++AVL C+ G LE K ++ F + V
Sbjct: 320 KHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSH-GGLE-DKGLNIFNDMSSGKIEV 377
Query: 129 ------YVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
Y C ++D+ + G +EE + + M E T W S++ +H
Sbjct: 378 EPKMEHYGC--VVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 426
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/441 (40%), Positives = 275/441 (62%), Gaps = 2/441 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
++ N +I G V AR +FS +P +++ SW ++I G ++ + EAL++F +M+
Sbjct: 706 NLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQ 765
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
K KP+++T+ VL ACA L L+ G+ +H G+ +++V AL+DMY KCG L
Sbjct: 766 KQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLV 824
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+F+ + ++ ++SW+ MI G+ MH M G++P+ +F +L+ACS
Sbjct: 825 LAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACS 884
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GL+++G MR + G+ P +EHY C+VDLL+R G L +A + I +M + P+ +W
Sbjct: 885 HSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIW 944
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
G LL GCR+H ++ LAE+ H+ +L+ N YYVV++NVYAEA KWEEV ++R+ M+ R
Sbjct: 945 GVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKR 1004
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G K+ PGCS I + G + FVAG+ HPQAK I + KL ++M+ + Y VL++
Sbjct: 1005 GFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLIN- 1063
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
ED +KE+ HSEK A+ +G++N PG ++R+ KN RVC DCH K +S+ REIV
Sbjct: 1064 EDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIV 1123
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
+RD NRFH FKDG C+C+D +
Sbjct: 1124 LRDSNRFHHFKDGLCSCRDAF 1144
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
+ A N +IA G V +A +LF + + +V SW S+I G G L++F +M
Sbjct: 504 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G + + T+V+VLVA A +G+L G+++H F F V N L+DMY KCG L
Sbjct: 564 ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 623
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
VF M + T+VSW+S I + M G++P+ T ++HAC+
Sbjct: 624 GATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 683
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+DKGR + + + ++ G+ + L+++ ++ G +EEAR V + + V + V W
Sbjct: 684 CSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV-KDIVSW 741
Query: 266 GALLGG 271
++GG
Sbjct: 742 NTMIGG 747
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 7/247 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + A ++F M + SWTS I + G+ +A+ +F EM+ G +
Sbjct: 610 NTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ TV +++ ACA L+ G+ VH + NG N+ V NALI+MY KCG +EE V
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F + + +VSW++MI G++ + M + KP+ +T VL AC+ + +
Sbjct: 730 FSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAAL 788
Query: 211 DKGRALLT-IMRRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
DKGR + I+RR Y H C LVD+ ++ G L A +++ +M + + W +
Sbjct: 789 DKGREIHGHILRRGYF---SDLHVACALVDMYAKCGLLVLA-QLLFDMIPKKDLISWTVM 844
Query: 269 LGGCRLH 275
+ G +H
Sbjct: 845 IAGYGMH 851
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 40/259 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y +CG+ R +FDK+ + WN++++
Sbjct: 410 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY------------------------ 445
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
AK G E++ +F +M+K G N T VL A LG ++ K VH +
Sbjct: 446 -------AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 498
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF N V N+LI Y K G +E + +F+ + E VVSW+SMI G ++
Sbjct: 499 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 558
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI----VPGVEHYGCLV 237
M+ +G++ + T + VL A +++G + GRAL +G+ V L+
Sbjct: 559 FIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRAL-----HGFGVKACFSEEVVFSNTLL 613
Query: 238 DLLSRAGRLEEAREVIANM 256
D+ S+ G L A EV M
Sbjct: 614 DMYSKCGNLNGATEVFVKM 632
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+VL CA+ LE GK VH NG + + L+ MYV CG L +G ++F+ +
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK-GRAL 216
V W+ ++ +A M ++G+ N TF VL + +G V + R
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
+++ +G V L+ + G +E A + +S P+ V W +++ GC
Sbjct: 494 GYVLKLGFGSNTAV--VNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGC 546
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 37/175 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A+L+FD +P++D+ +W +MIA
Sbjct: 813 LVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG------------------------- 847
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAK 120
YG+ G EA+ F+EM G +P+E + +L AC+ G L G K +
Sbjct: 848 ----YGMH--GFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRN 901
Query: 121 GNGFLRNV--YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMH 172
G + Y C ++D+ + G L + Y+ E M + + W ++ G +H
Sbjct: 902 ECGVEPKLEHYAC--VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIH 954
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 361 bits (926), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/428 (43%), Positives = 264/428 (61%), Gaps = 3/428 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F +P+R+V S T++I G A+ G+ EEAL++F ++ +G K N VT VL
Sbjct: 6 GKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVL 65
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A + L L+ GK VH + V + N+LIDMY KCG L R+F+ M ERTV+
Sbjct: 66 TALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVI 125
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
SW++M+VG++ H M +KP+ VT + VL CSH GL DKG +
Sbjct: 126 SWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFND 185
Query: 220 MRR-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
M + P +EHYGC+VDLL R+GR+EEA E I M P +WG+LLG CR+H N+
Sbjct: 186 MSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNV 245
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+ E A + L +++ N G YV++SN+YA AG+WE+VS +R LM + V K PG SSI +
Sbjct: 246 DIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIEL 305
Query: 339 DGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRH 398
D V+H F A D +HP+ + I ++L K GY+PD S VL D+ D +QKE L H
Sbjct: 306 DQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDV-DEEQKEKILLGH 364
Query: 399 SEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDG 458
SEKLAL +GLI + + IR++KNLR+C DCH K +S++ RE+ +RD+NRFH G
Sbjct: 365 SEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGG 424
Query: 459 ACTCKDYW 466
C+C+DYW
Sbjct: 425 KCSCEDYW 432
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
MY K G + E VFE + ER VVS +++I G+A + GMK NYVT
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ GVL A S + +D G+ + + R I V L+D+ S+ G L +R + M
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLRSE-IPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM 119
Query: 257 SVPPNRVVWGALLGGCRLH 275
+ W A+L G H
Sbjct: 120 -YERTVISWNAMLVGYSKH 137
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ H ++ ++P + N +I G + +R +F +M +R V SW +++ G +
Sbjct: 77 GKQVHNHVLRSEIPSF-VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYS 135
Query: 70 KCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
K G E LK+F+ M E+ KP+ VT++AVL C+ G LE K ++ F + V
Sbjct: 136 KHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSH-GGLE-DKGLNIFNDMSSGKIEV 193
Query: 129 ------YVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXX 181
Y C ++D+ + G +EE + + M E T W S++ +H
Sbjct: 194 EPKMEHYGC--VVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFA 251
Query: 182 XXXMIRV--GMKPNYV 195
++ + G NYV
Sbjct: 252 GQQLLEIEPGNAGNYV 267
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/435 (43%), Positives = 267/435 (61%), Gaps = 3/435 (0%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRN-VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKP 91
+ A G V A+ F M N V W ++I G AK G EEA+++F M KP
Sbjct: 287 LTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKP 346
Query: 92 NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF 151
+ +T+ + ++ACAQ+G L+ + + + + + + +++V LIDMY KCG +E VF
Sbjct: 347 DSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVF 406
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
+ + VV WS+MI+G+ +H M + G+ PN VTFIG+L ACSH GL+
Sbjct: 407 DRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIK 466
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+G L MR D+GI P EHY C+VDLL RAG L++A I M + P VWGALL
Sbjct: 467 QGWELFHCMR-DFGIKPRNEHYSCVVDLLGRAGYLKQAYVFILKMPIEPGVSVWGALLSA 525
Query: 272 CRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTP 331
C++H+ + L E A + L LD N G+YV +SN+YA + W+ V+ IR LMK +G+ K
Sbjct: 526 CKIHRCVTLGEYAAQKLFSLDPYNTGHYVQLSNLYASSRMWDRVAYIRVLMKEKGLTKYL 585
Query: 332 GCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQK 391
G S I I+ +H F AGD +HPQAK IF ++ ++K G++P T VL DL + ++K
Sbjct: 586 GYSVIDINEKLHTFHAGDMSHPQAKEIFYELQRQERRLKEVGFVPHTESVLHDL-NYEEK 644
Query: 392 EIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNR 451
E L HSE++A+ YGLI+T P ++RI KNLR C +CH+A KL+S++ REI+VRD NR
Sbjct: 645 EENLCIHSERIAVAYGLISTAPRTTLRITKNLRACVNCHSAIKLISKLFEREIIVRDANR 704
Query: 452 FHCFKDGACTCKDYW 466
FH FKDG C+C DYW
Sbjct: 705 FHHFKDGLCSCGDYW 719
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 5/247 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++A G +G AR +F + R + SWT+++ G + G EAL++F +M K K
Sbjct: 184 NGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVK 243
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ +++V+V+ A + DLE G+S+H G + +L Y KCG +
Sbjct: 244 PDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSF 303
Query: 151 FEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
F+ M+ V+ W++MI G+A + MI +KP+ +T + AC+ VG
Sbjct: 304 FDKMKTPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGS 363
Query: 210 VDKGRALLTIMRRD-YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
+ + + +R+ YG V L+D+ ++ G +E AR V SV + V+W A+
Sbjct: 364 LKLAQWMDDYVRKSKYGGDIFVN--TTLIDMYAKCGSVESARLVFDRASV-KDVVMWSAM 420
Query: 269 LGGCRLH 275
+ G LH
Sbjct: 421 IMGYGLH 427
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 115/233 (49%), Gaps = 1/233 (0%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVA 98
N+G + AR LF P ++ W ++I ++ M ++++ M+ G P++ T
Sbjct: 91 NLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPC 150
Query: 99 VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
VL AC++L D VH GF +V+V N L+ +Y KCG + VF+ + +RT
Sbjct: 151 VLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRT 210
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
+VSW++++ G+ + M + +KP++++ + V+ A + V +++GR+L
Sbjct: 211 IVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHG 270
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + G+ + L ++ G + A+ M P ++W A++ G
Sbjct: 271 CIIK-MGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISG 322
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 5/171 (2%)
Query: 7 ASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
A G + A+ M D + + DI +I G V +AR +F ++V W+
Sbjct: 359 AQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWS 418
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
++I G G EA+ ++ M+++G PN+VT + +L AC+ G ++ G + +
Sbjct: 419 AMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTACSHSGLIKQGWELFHCMRDF 478
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
G + ++D+ + G L++ Y M E V W +++ +H
Sbjct: 479 GIKPRNEHYSCVVDLLGRAGYLKQAYVFILKMPIEPGVSVWGALLSACKIH 529
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/467 (40%), Positives = 279/467 (59%), Gaps = 21/467 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+ YA G+ +R +FD++ + D+ATWN+++ + + F
Sbjct: 293 LLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDD--------- 343
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
E+L +F +M+ G +PNEVT+VA++ AC+ LG + G VH F
Sbjct: 344 ---------ADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLR 394
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE--RTVVSWSSMIVGFAMHXXXXXXX 179
N N +V A +DMY KCGCL +VF+ M E R +++MI GFA+H
Sbjct: 395 NKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQAL 454
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M G+ P+ TF+ + ACSHVGLV++G + M+ +G+ P +EHYGCL+DL
Sbjct: 455 ELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDL 514
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAGRL+EA E +A+M + PN V+W +LLG R+H N+ + E A+ L +L+ G Y
Sbjct: 515 LGRAGRLKEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNY 574
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V++SN+YA G+ +V R+R+LMK GV K PG S + I G +HEF+ GD +HP +K I+
Sbjct: 575 VLLSNMYASVGRVNDVKRVRKLMKHHGVNKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIY 634
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRI 419
++ +++ G+ TS L DLE+ + KE L HSE+LA+ + LI + ++IRI
Sbjct: 635 LKIAEINSRLEEYGHKARTSEALFDLEE-EDKEGVLSYHSERLAIAFALIASPSSLAIRI 693
Query: 420 MKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
+KNLRVC DCHA KL+S +REI+VRDRNRFH FKDG+C+C DYW
Sbjct: 694 IKNLRVCGDCHAFTKLISVAYHREIIVRDRNRFHHFKDGSCSCLDYW 740
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 191/446 (42%), Positives = 271/446 (60%), Gaps = 5/446 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFS 82
+ D++ N +I G + +A +F+ + R NV SW S++ L + E A VF
Sbjct: 241 KEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFL 300
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+ K+ +P + + +VL ACA+LG LE G+SVH A N++V +AL+DMY KCG
Sbjct: 301 QARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCG 359
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI--RVGMKPNYVTFIGV 200
+E +VF + ER +V+W++MI G+A M G++P+YVT I +
Sbjct: 360 SIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISI 419
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
L CS VG V++G + MR +YGI PG EH+ C+VDLL R+G ++ A E I NM++ P
Sbjct: 420 LSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQP 479
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
VWGALLG CR+H L + A L +LD ++ G +VV+SN+ A AG+WEE + +R+
Sbjct: 480 TISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRK 539
Query: 321 LMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
MK G+KK G S I + +H F A D +H + I M KL MK GY+PDT++
Sbjct: 540 EMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNL 599
Query: 381 VLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIE 440
L DLED ++K ++ HSEK+AL +GLI G+ IRI KNLR+C DCH+A K +S I
Sbjct: 600 SLFDLED-EEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIV 658
Query: 441 NREIVVRDRNRFHCFKDGACTCKDYW 466
REI+VRD +RFH FKDG C+CKDYW
Sbjct: 659 GREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 132/292 (45%), Gaps = 16/292 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G+ G A ++F MPQRN+ +W + I + +A+ F E +PN +T A
Sbjct: 156 TGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAF 215
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER-T 158
L AC + L G+ +H F G+ +V V N LID Y KCG + VF + R
Sbjct: 216 LNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKN 275
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VVSW SM+ + R ++P VL AC+ +G ++ GR++
Sbjct: 276 VVSWCSMLAAL-VQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHA 334
Query: 219 IMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ + + I G LVD+ + G +E A +V + + N V W A++GG
Sbjct: 335 LAVKACVEDNIFVG----SALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMIGGYAHQ 389
Query: 276 KNIVLAEEAMRHLSKLDLLNDGY---YVVMSNVYAEAGKWEEVSRIRRLMKS 324
+I + A+R ++ L + G YV + ++ + + V R ++ +S
Sbjct: 390 GDI---DMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFES 438
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 1/262 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G T HA ++ + N ++ + + +A+ + S R V +WTS+I G
Sbjct: 25 GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
AL F+ M +D +PN+ T V A A + GK +H A G + +V+
Sbjct: 85 HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V + DMY K G + +F+ M +R + +W++ I + V
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+PN +TF L+AC + ++ GR L + R G V L+D + G + A
Sbjct: 205 GEPNSITFCAFLNACVDMVRLNLGRQLHAFIVR-CGYKEDVSVANGLIDFYGKCGDIVSA 263
Query: 250 REVIANMSVPPNRVVWGALLGG 271
V + N V W ++L
Sbjct: 264 EMVFNRIGNRKNVVSWCSMLAA 285
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 358 bits (918), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 182/444 (40%), Positives = 269/444 (60%), Gaps = 5/444 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE-- 83
DI + +I G + A ++F MP RNV SW+ +IYG + G +E+L++F
Sbjct: 155 DIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFL 214
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+E++ N+ T+ +VL C L+ G+ +H + F + +V ++LI +Y KCG
Sbjct: 215 VEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGV 274
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLH 202
+EE Y VFE + R + W++M++ A H M VG MK N++TF+ VL+
Sbjct: 275 VEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLY 334
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACSH GLV+KG+ +M+ DYGI PG +HY +VDLL RAG+L +A ++I M + P
Sbjct: 335 ACSHAGLVEKGKYYFELMK-DYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTE 393
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
VWGALL GCRLH N LA +S+L ++ G +V++SN YA AG+WEE ++ R++M
Sbjct: 394 SVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMM 453
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
+ RG+KK G S + +H F AGD +H ++ I++ ++L +M GY+ DTS VL
Sbjct: 454 RDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVADTSFVL 513
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
++ D ++K + HSE+LA+ +G I G IR+MKNLRVC DCH A K +S+ R
Sbjct: 514 KEV-DGEEKSRSIRYHSERLAIAFGFITFPHGQPIRVMKNLRVCGDCHTAIKFISKCTGR 572
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
I+VRD NRFH F+DG CTC DYW
Sbjct: 573 VIIVRDNNRFHRFEDGKCTCGDYW 596
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 133/321 (41%), Gaps = 10/321 (3%)
Query: 27 IATWNIMIAHLIN----VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFS 82
+ T ++ HLIN ++ +F P ++ +W+SVI A+ + +L F
Sbjct: 51 LQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFR 110
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
M + G P++ + +C L L K +H FA + +++V +++IDMY KCG
Sbjct: 111 LMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCG 170
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI--RVGMKPNYVTFIGV 200
+ + VF+ M R VVSWS +I G+ + N T V
Sbjct: 171 DICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSV 230
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
L C L+ GR L+ + L+ L S+ G +EEA +V ++V
Sbjct: 231 LRVCGGSTLLQMGR-LIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTV-R 288
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYA--EAGKWEEVSRI 318
N +W A+L C H + E + + + + + +YA AG E+
Sbjct: 289 NLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYY 348
Query: 319 RRLMKSRGVKKTPGCSSITID 339
LMK G++ S +D
Sbjct: 349 FELMKDYGIEPGTQHYSTMVD 369
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 191/470 (40%), Positives = 275/470 (58%), Gaps = 7/470 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWN-IMIAHLINVGYVGAARDLFSSMPQRNVR- 59
LL LYA C R A+++FD +P R++A+WN I+ A+ N Y +FS M + V+
Sbjct: 485 LLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLY-MFSQMNRDEVKA 543
Query: 60 ---SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+W+ VI G K EEA+++F +M+ G KP+E T+ ++L AC+ L GK +H
Sbjct: 544 DEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIH 603
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
+ + ++ NAL+DMY KCG L VF+ M + V SW++MI MH
Sbjct: 604 CYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGK 663
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M+ +KP+ TF VL ACSH LV++G + M RD+ + P EHY C+
Sbjct: 664 EALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCV 723
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
VD+ SRAG LEEA I M + P + W A L GCR++KN+ LA+ + + L ++D
Sbjct: 724 VDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGS 783
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
YV + N+ A W E S+IR+LMK RG+ KTPGCS + VH FVAGD+++ ++
Sbjct: 784 ANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESD 843
Query: 357 GIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMS 416
I+ ++L K+K GY PDT VL D+ D ++K L HSEKLA+ +G++N +
Sbjct: 844 KIYNFLDELFAKIKAAGYKPDTDYVLHDI-DQEEKAESLCNHSEKLAVAFGILNLNGQST 902
Query: 417 IRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
IR+ KNLR+C DCH A K +S + IVVRD RFH FK+G C+CKD+W
Sbjct: 903 IRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 159/333 (47%), Gaps = 44/333 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++LY SC R A+ +FD MP R++ TWN + + +N G+ PQ+
Sbjct: 283 LVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGF-----------PQK----- 326
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
L VF EM +G KP+ + + ++L AC+QL DL+ GK++H FA
Sbjct: 327 ---------------GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK 371
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+G + +V+VC AL+++Y C C+ E VF+ M R VV+W+S+ +
Sbjct: 372 HGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNV 431
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ G+KP+ VT + +LHACS + + G+ + R +G+V V L+ L +
Sbjct: 432 FREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVR-HGMVEDVFVCNALLSLYA 490
Query: 242 RAGRLEEAREVIANMSVPPNRVV--WGALLGGC----RLHKNIVLAEEAMRHLSKLDLLN 295
+ + EA+ V + P+R V W +L K + + + R K D +
Sbjct: 491 KCVCVREAQVVF---DLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEIT 547
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
+ VV+ + + EE I R M++ G K
Sbjct: 548 --WSVVIGGC-VKNSRIEEAMEIFRKMQTMGFK 577
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 37/269 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ YA C R A+ +FD MP RD+ TWN + + +N G+ PQ+
Sbjct: 182 FVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGF-----------PQK----- 225
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
L VF EM DG KP+ VTV +L AC+ L DL+ GK++H FA
Sbjct: 226 ---------------GLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+G + NV+V NAL+++Y C C+ E VF+ M R V++W+S+ +
Sbjct: 271 HGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNV 330
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G+KP+ + +L ACS + + G+ + + +G+V V LV+L +
Sbjct: 331 FREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK-HGMVEDVFVCTALVNLYA 389
Query: 242 RAGRLEEAREVIANMSVPPNR--VVWGAL 268
+ EA+ V M P+R V W +L
Sbjct: 390 NCLCVREAQTVFDLM---PHRNVVTWNSL 415
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 157/375 (41%), Gaps = 89/375 (23%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++LYA+C R A+ +FD MP R++ TWN + + +N G+ PQ+
Sbjct: 384 LVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGF-----------PQK----- 427
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
L VF EM +G KP+ VT++++L AC+ L DL+ GK +H FA
Sbjct: 428 ---------------GLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVR 472
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+G + +V+VCNAL+ +Y KC C+ E VF+ + R V SW+ ++ + +
Sbjct: 473 HGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYM 532
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M R +K + +T + +V G GC+
Sbjct: 533 FSQMNRDEVKADEIT---------------------------WSVVIG----GCV----- 556
Query: 242 RAGRLEEAREV---IANMSVPPNRVVWGALLGGCRLHKNIVLAEE----AMRHLSKLDLL 294
+ R+EEA E+ + M P+ ++L C L + + + +E RH DL
Sbjct: 557 KNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLA 616
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 354
V M YA+ G + +M + V + + + H
Sbjct: 617 RTNALVDM---YAKCGGLSLSRNVFDMMPIKDVFSW------------NTMIFANGMHGN 661
Query: 355 AKGIFEMWEKLLVKM 369
K ++EK+L+ M
Sbjct: 662 GKEALSLFEKMLLSM 676
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 120/245 (48%), Gaps = 6/245 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D++ N I V AR +F + R+V +W S+ CG ++ L VF +M
Sbjct: 74 DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMG 133
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ K N +TV ++L C+ L DL+ GK +H F +G + +V+V +A ++ Y KC C+
Sbjct: 134 LNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVR 193
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E VF+ M R VV+W+S+ + M+ G+KP+ VT +L ACS
Sbjct: 194 EAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--V 263
+ + G+A+ + +G+V V LV+L + EA+ V M P+R +
Sbjct: 254 DLQDLKSGKAIHGFALK-HGMVENVFVSNALVNLYESCLCVREAQAVFDLM---PHRNVI 309
Query: 264 VWGAL 268
W +L
Sbjct: 310 TWNSL 314
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 6/199 (3%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G+ EA+K+++ G KP++ +AV ACA D K H A G + +V +
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
NA I Y KC C+E RVF+ + R VV+W+S+ + M +K
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
N +T +L CS + + G+ + + R +G+V V V+ ++ + EA+
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVR-HGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 252 VIANMSVPPNR--VVWGAL 268
V M P+R V W +L
Sbjct: 198 VFDLM---PHRDVVTWNSL 213
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 358 bits (918), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 177/441 (40%), Positives = 274/441 (62%), Gaps = 2/441 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
++ N +I G V AR +FS +P +++ SW ++I G ++ + EAL++F +M+
Sbjct: 431 NLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQ 490
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
K KP+++T+ VL ACA L L+ G+ +H G+ +++V AL+DMY KCG L
Sbjct: 491 KQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLV 549
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+F+ + ++ ++SW+ MI G+ MH M G++P+ +F +L+ACS
Sbjct: 550 LAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACS 609
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GL+++G MR + G+ P +EHY C+VDLL+R G L +A + I +M + P+ +W
Sbjct: 610 HSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIW 669
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
G LL GCR+H ++ LAE+ H+ +L+ N YYVV++NVYAEA KWEEV ++R+ M+ R
Sbjct: 670 GVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKR 729
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G K+ PGCS I + G + FVAG+ HPQAK I + KL ++M+ + Y VL++
Sbjct: 730 GFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLIN- 788
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
ED +KE+ HSEK A+ +G++N PG ++R+ KN RVC DCH K +S+ EIV
Sbjct: 789 EDDMEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIV 848
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
+RD NRFH FKDG C+C+D +
Sbjct: 849 LRDSNRFHHFKDGLCSCRDAF 869
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 134/261 (51%), Gaps = 5/261 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
+ A N +IA G V +A +LF + + +V SW S+I G G L++F +M
Sbjct: 229 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 288
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G + + T+V+VLVACA +G+L G+++H F F V N L+DMY KCG L
Sbjct: 289 ILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 348
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
VF M + T+VSW+S+I + M G++P+ T ++HAC+
Sbjct: 349 GATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 408
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+DKGR + + + ++ G+ + L+++ ++ G +EEAR V + + V + V W
Sbjct: 409 CSSSLDKGRDVHSYVIKN-GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV-KDIVSW 466
Query: 266 GALLGGCRLHKNIVLAEEAMR 286
++GG + +L EA+
Sbjct: 467 NTMIGG---YSQNLLPNEALE 484
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 131/254 (51%), Gaps = 7/254 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
++ N ++ G + A ++F M + SWTS+I + G+ +A+ +F E
Sbjct: 328 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDE 387
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M+ G +P+ TV +++ ACA L+ G+ VH + NG N+ V NALI+MY KCG
Sbjct: 388 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 447
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+EE VF + + +VSW++MI G++ + M + KP+ +T VL A
Sbjct: 448 VEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPA 506
Query: 204 CSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPN 261
C+ + +DKGR + I+RR Y H C LVD+ ++ G L A +++ +M +
Sbjct: 507 CAGLAALDKGREIHGHILRRGYF---SDLHVACALVDMYAKCGLLVLA-QLLFDMIPKKD 562
Query: 262 RVVWGALLGGCRLH 275
+ W ++ G +H
Sbjct: 563 LISWTVMIAGYGMH 576
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 41/274 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y +CG+ R +FDK+ + WN++++
Sbjct: 135 LVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEY------------------------ 170
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
AK G E++ +F +M+K G N T VL A LG ++ K VH +
Sbjct: 171 -------AKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 223
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF N V N+LI Y K G +E + +F+ + E VVSW+SMI G ++
Sbjct: 224 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 283
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI----VPGVEHYGCLV 237
M+ +G++ + T + VL AC+++G + GRAL +G+ V L+
Sbjct: 284 FIQMLILGVEVDLTTLVSVLVACANIGNLSLGRAL-----HGFGVKACFSEEVVFSNTLL 338
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
D+ S+ G L A EV M V W +++
Sbjct: 339 DMYSKCGNLNGATEVFVKMG-DTTIVSWTSIIAA 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 37/175 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A+L+FD +P++D+ +W +MIA
Sbjct: 538 LVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG------------------------- 572
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAK 120
YG+ G EA+ F+EM G +P+E + A+L AC+ G L G K +
Sbjct: 573 ----YGMH--GFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRN 626
Query: 121 GNGFLRNV--YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMH 172
G + Y C ++D+ + G L + Y+ E M + + W ++ G +H
Sbjct: 627 ECGVEPKLEHYAC--VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIH 679
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+VL CA+ LE GK VH NG + + L+ MYV CG L +G ++F+ +
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK-GRAL 216
V W+ ++ +A M ++G+ N TF VL + +G V + R
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
+++ +G V L+ + G +E A + +S P+ V W +++ GC
Sbjct: 219 GYVLKLGFGSNTAV--VNSLIAAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGC 271
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 183/466 (39%), Positives = 271/466 (58%), Gaps = 10/466 (2%)
Query: 9 CGETR--------HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
CG+ R HA+L+ + D+ ++++ G V +AR +F + RNV
Sbjct: 237 CGQIRDLGLGLQVHAQLLKGGLT-FDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVV 295
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
WTS++ + G EE L + S M+++G+ NE T +L A A + L G +H +
Sbjct: 296 WTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVE 355
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G V V NALI+MY KCGC++ Y VF MR R +++W++MI G++ H
Sbjct: 356 KLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALL 415
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ G PN+VTF+GVL AC+H+ LV++G L + + + + PG+EHY C+V +L
Sbjct: 416 LFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVL 475
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG LEEA + V + V W LL C +H+N L + + ++D + G Y
Sbjct: 476 CRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYT 535
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
++SN+YA+A W+ V+ IR++M+ R VKK PG S I I VH F + HP+ I+
Sbjct: 536 LLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYN 595
Query: 361 MWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIM 420
+ LL +K GY+P+ VL D+ED +QKE +L HSEKLA+ YGL+ IR++
Sbjct: 596 KVQLLLEMIKQLGYVPNIEAVLHDVED-EQKESYLNYHSEKLAIAYGLMKIPSPAPIRVI 654
Query: 421 KNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
KNLR+CEDCH A KL+S++ NR I+VRD +RFH F+DG CTC D+W
Sbjct: 655 KNLRICEDCHTAVKLISKVTNRLIIVRDASRFHHFRDGTCTCTDHW 700
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 25/260 (9%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+ SV+ L + G EA++V M +G + VT V+V+ C Q+ DL G VH
Sbjct: 195 YNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLL 254
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G +V+V + L+DM+ KCG + +VF+G++ R VV W+S++ + +
Sbjct: 255 KGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLN 314
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R G N TF +L+A + + + G LL GI V L+++
Sbjct: 315 LLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGD-LLHARVEKLGIKNRVIVGNALINMY 373
Query: 241 SRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLH----------KNIVLAEEAMRHL 288
S+ G ++ + +V +M NR + W A++ G H ++++ A E H+
Sbjct: 374 SKCGCIDSSYDVFFDMR---NRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHV 430
Query: 289 S---------KLDLLNDGYY 299
+ L L+N+G+Y
Sbjct: 431 TFVGVLSACAHLALVNEGFY 450
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 130/314 (41%), Gaps = 21/314 (6%)
Query: 10 GETRHARLMFDKMP-------QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
G++ H +L+ + +I N +I + + AR LF M R+V S+
Sbjct: 31 GKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYN 90
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
++ G G E +K+F M +PNE VL ACA G + G H F
Sbjct: 91 VLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKF 150
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-----RERTVVSWSSMIVGFAMHXXXXX 177
G + + +V ++L+ MY KC ++ +V E + ++S++
Sbjct: 151 GLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGE 210
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ G+ + VT++ V+ C + + G + + + G+ V LV
Sbjct: 211 AVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKG-GLTFDVFVGSMLV 269
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD----L 293
D+ + G + AR+V + N VVW +L+ + EE + LS +D +
Sbjct: 270 DMFGKCGDVLSARKVFDGLQ-NRNVVVWTSLMTAYLQNGEF---EETLNLLSCMDREGTM 325
Query: 294 LNDGYYVVMSNVYA 307
N+ + V+ N +A
Sbjct: 326 SNEFTFAVLLNAFA 339
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 46/241 (19%)
Query: 104 AQLGDLEFGKSVH-------RFAKGNGFLR-NVYVCNALIDMYVKCGCLEEGYRVFEGMR 155
A +L FGKS+H + + + + N+ N+LI++YVKC L +F+ M
Sbjct: 23 ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82
Query: 156 ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRA 215
R+VVS++ ++ G+ M+ +PN F VL AC+H G V +G
Sbjct: 83 LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142
Query: 216 --------------------------------LLTIMRRDYGIVPGVEH---YGCLVDLL 240
L ++ ++G + Y +++ L
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202
Query: 241 SRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
+GRL EA EV+ M V + V + +++G C +++ L + L K L D
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDV 262
Query: 298 Y 298
+
Sbjct: 263 F 263
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 189/446 (42%), Positives = 270/446 (60%), Gaps = 5/446 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFS 82
+ D++ N +I G + +A +FS + R NV SW S++ L + E A VF
Sbjct: 241 KEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFL 300
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
++ K+ +P + + +VL ACA+LG LE G+SVH A N++V +AL+D+Y KCG
Sbjct: 301 QVRKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCG 359
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI--RVGMKPNYVTFIGV 200
+E +VF + E +V+W++MI G+A M G++P+YVT + +
Sbjct: 360 SIENAEQVFSELPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSI 419
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
L CS VG V++G + MR +YGI PG EH+ C+VDLL R+G ++ A E I NM + P
Sbjct: 420 LSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQP 479
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
VWGALLG CR+H L + A L +LD ++ G +VV+SN+ A AG+WEE + +R+
Sbjct: 480 TISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRK 539
Query: 321 LMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
MK G+KK G S I + +H F A D +H + I M KL MK GY+PDT++
Sbjct: 540 EMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNL 599
Query: 381 VLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIE 440
L DLED ++K ++ HSEK+AL +GLI G+ IRI KNLR+C DCH+A K +S I
Sbjct: 600 SLFDLED-EEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIV 658
Query: 441 NREIVVRDRNRFHCFKDGACTCKDYW 466
REI+VRD +RFH FKDG C+CKDYW
Sbjct: 659 GREIIVRDNHRFHRFKDGCCSCKDYW 684
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 10/289 (3%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G+ G A ++F MP RN+ +W + I + + + F E +PN +T A
Sbjct: 156 TGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAF 215
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER-T 158
L AC + L G+ +H F G+ +V V N LID Y KCG + VF + R
Sbjct: 216 LNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKN 275
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
VVSW SM+ + +R ++P VL AC+ +G ++ GR++
Sbjct: 276 VVSWCSMLTAL-VQNHEEERACMVFLQVRKEVEPTDFMISSVLSACAELGGLELGRSVHA 334
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+ + + + LVDL + G +E A +V + + N V W A++GG +I
Sbjct: 335 LAVKAC-VKDNIFVGSALVDLYGKCGSIENAEQVFSELP-ESNLVTWNAMIGGYAHQGDI 392
Query: 279 VLAEEAMRHLSKLDLLNDGY---YVVMSNVYAEAGKWEEVSRIRRLMKS 324
+ A+R ++ L + G YV + ++ + + V R ++ +S
Sbjct: 393 ---DMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVERGIQIFES 438
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 1/260 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G T HA ++ + N ++ + + +A+ + S R V +WTS+I G
Sbjct: 25 GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCV 84
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
AL F+ M +D +PN+ T V A A + GK +H A G + +V+
Sbjct: 85 HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMIYDVF 144
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V + DMY K G + +F+ M R + +W++ I + V
Sbjct: 145 VGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVH 204
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+PN +TF L+AC + ++ GR L + R G V L+D + G + A
Sbjct: 205 GEPNSITFCAFLNACVDMMRLNLGRQLHAFIVR-CGYKEDVSVANGLIDFYGKCGDIVSA 263
Query: 250 REVIANMSVPPNRVVWGALL 269
V + + N V W ++L
Sbjct: 264 EMVFSRIGNRKNVVSWCSML 283
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 354 bits (909), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 185/455 (40%), Positives = 271/455 (59%), Gaps = 31/455 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y + A+ +F M + D+A+W MI G V +AR LF MP +N+ +W
Sbjct: 24 LVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTW 83
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I G + ++A+++F + +G NEV V+ ACA LG L G+ + A
Sbjct: 84 STMINGYLRNNCFDKAVEIFEILIDEGLVANEVGAVS---ACAHLGALAAGEKAYEHAIR 140
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NV + A++DMY +CG +E+ RVFE M+E+ V+SW+S+I G AMH
Sbjct: 141 INLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEY 200
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M++ G+ P +TF VL A SH GLV+KG+ + M+RDY + P +EHYGC+VDLL
Sbjct: 201 FYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLG 260
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG+LEEA I M + PN + + + GYY +
Sbjct: 261 RAGKLEEAENFILEMPIKPN---------------------------APMKPEHSGYYAL 293
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA KW++ + +RRLMK +GV+K PG S I IDG HEF G++ HP+ I M
Sbjct: 294 LSNIYARTNKWKDATVMRRLMKEKGVRKQPGYSLIEIDGKTHEFTIGNKRHPEIDKIERM 353
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
WEK+L K+K+ GY+ +TS L D+ D ++KE L+RHSEKLA+ YG++ + +IRI+K
Sbjct: 354 WEKILQKIKLAGYMGNTSEALFDI-DEEEKEDALHRHSEKLAIAYGIMKIQAPGTIRIVK 412
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFK 456
NLRVCEDCH A K +S++ + E++VRDRNRFH FK
Sbjct: 413 NLRVCEDCHTATKFISKVFDVELIVRDRNRFHHFK 447
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 177/443 (39%), Positives = 267/443 (60%), Gaps = 3/443 (0%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D+ + +I +G + A +F M + W S+I A+ +EAL ++
Sbjct: 214 ESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKS 273
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M ++G ++ T+ +VL AC LE G+ VH F +++ + NAL+DMY KCG
Sbjct: 274 MRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGS 331
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
LE+ +F M + V+SWS+MI G A + M G +PNY+T +GVL A
Sbjct: 332 LEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFA 391
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH GLV++G M+ YGI PG EHY CL+DLL RAG+L+E ++I M+ P+ V
Sbjct: 392 CSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKLDEMVKLIHEMTCEPDVV 451
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
W LL CR +N+ LA A + + KLD + G YV++SN+YA + +W++V+ +RR M
Sbjct: 452 TWRTLLDACRAQRNVDLATYAAKEILKLDQQDAGAYVLLSNIYANSKRWDDVAEVRRTMS 511
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
+RG++K PGCS I ++ +H F+ GD++HPQ I ++ + K+ GY+PDT+ +L
Sbjct: 512 ARGIRKEPGCSWIEVNNQIHAFIVGDKSHPQIDEINRKLDEYIRKLTDAGYVPDTNFMLK 571
Query: 384 DLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENRE 443
DLE +Q E L HSEKLA+V+G+I+ +IRI KNL++C DCH KL++++E R
Sbjct: 572 DLE-GEQSEYSLRHHSEKLAIVFGIISFPREKTIRIWKNLKICGDCHIFAKLIAKLEQRH 630
Query: 444 IVVRDRNRFHCFKDGACTCKDYW 466
IV+RD R+H F+DG C+C DYW
Sbjct: 631 IVIRDPIRYHHFQDGVCSCGDYW 653
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 120/242 (49%), Gaps = 9/242 (3%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ + + + A+ +F MP+RNV SWT++I + + + A+K+ M +DG
Sbjct: 123 NTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVM 182
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PN T +VL AC +L DL K VH G +V+V +ALID Y K G L E V
Sbjct: 183 PNMYTFSSVLRACERLCDL---KQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGV 239
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F M V W+S+I FA H M R G + T VL AC+ L+
Sbjct: 240 FREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLL 299
Query: 211 DKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ GR + + +++ D ++ L+D+ + G LE+A+ + + M+V + + W ++
Sbjct: 300 ELGRQVHVHVLKFDQDLILN----NALLDMYCKCGSLEDAKFIFSRMAV-KDVISWSTMI 354
Query: 270 GG 271
G
Sbjct: 355 SG 356
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
Q N+ TS + A+++ MEK G + + ++ C + GK
Sbjct: 46 QPNIAPETSSLLNHCYNRDLPRAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKR 105
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
VH NG+ ++ N L++MYVK LEE VF+ M ER VVSW++MI ++
Sbjct: 106 VHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKL 165
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
MIR G+ PN TF VL AC L D + I++ G+ V
Sbjct: 166 NDRAMKLLVFMIRDGVMPNMYTFSSVLRACER--LCDLKQVHSGILKA--GLESDVFVRS 221
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
L+D S+ G L EA V M V + VVW +++ H +
Sbjct: 222 ALIDAYSKLGELLEAVGVFREM-VTGDSVVWNSIIAAFAQHSD 263
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 37/169 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y CG A+ +F +M +D+ +W+ MI+ L G+ A +LF S
Sbjct: 322 LLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDS--------- 372
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK- 120
M+ G +PN +T++ VL AC+ G + G R K
Sbjct: 373 ----------------------MKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKN 410
Query: 121 --GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
G R Y C L+D+ + G L+E ++ M E VV+W +++
Sbjct: 411 LYGIDPGREHYSC--LLDLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLL 457
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 354 bits (908), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 171/426 (40%), Positives = 260/426 (61%), Gaps = 1/426 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
++ A +F ++ ++TS+I ++ G EEALK++ +M+ KP+ ++L
Sbjct: 436 SHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLL 495
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L E GK +H A GF+ +++ N+L++MY KCG +E+ R F + +R +V
Sbjct: 496 NACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIV 555
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SWS+MI G A H M++ + PN++T + VL AC+H GLV++G+ M
Sbjct: 556 SWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETM 615
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+GI P EH+ C++DLL R+G+L EA E++ ++ + VWGALLG R+HKN+ L
Sbjct: 616 EEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVEL 675
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
E+A L L+ G V+++N+YA AG WE V+ +R++M++ VKK PG S I +
Sbjct: 676 GEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKD 735
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
+H F+ GD H ++ IF ++L + GY P + ++E + +KE LY HSE
Sbjct: 736 RIHTFIVGDRNHSRSDEIFAKLDELSELLSKAGYSPIIETDIHNVERS-EKEKLLYHHSE 794
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
KLA+ +GLI T PG IR+ KNLRVC DCH KLVS++ +R+IVVRD NRFH FK+G+C
Sbjct: 795 KLAVAFGLIVTPPGAPIRVKKNLRVCVDCHTFLKLVSKLVSRQIVVRDINRFHHFKNGSC 854
Query: 461 TCKDYW 466
+C DYW
Sbjct: 855 SCGDYW 860
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 117/234 (50%), Gaps = 14/234 (5%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
L S R V SW+++I + G +EAL F+EM G K NE T VL AC+ D
Sbjct: 39 LDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKD 98
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L GK VH +GF + +V N L+ MY KCG + ++F + E VVSW+++
Sbjct: 99 LNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSC 158
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
M+ ++PN + +L+AC+ GL D G I R +G++
Sbjct: 159 HVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACA--GLRDGG-----IGRTVHGLLM 211
Query: 229 GVEH------YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHK 276
+ H LVD+ ++AGR+E+A +V M + P+ V W A++ GC LH+
Sbjct: 212 KLGHGLDQFSANALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGCVLHE 264
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 36/276 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY+ C AR +D MP +D H+I +
Sbjct: 326 LIDLYSKCEMMDDARRAYDLMPTKD---------HII---------------------AG 355
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G ++CG E+A+ +F E+ + N+ T+ VL + A L ++ K +H +
Sbjct: 356 NALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIK 415
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G + YV N+L+D Y KC ++E ++FE +V+++SMI ++ H
Sbjct: 416 CGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKL 475
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M +KP+ +L+AC+++ ++G+ L + +G + + LV++ +
Sbjct: 476 YLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQ-LHVHAIKFGFMSDIFASNSLVNMYA 534
Query: 242 RAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLH 275
+ G +E+A + + P R V W A++GG H
Sbjct: 535 KCGSIEDADRAFSEI---PQRGIVSWSAMIGGLAQH 567
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D N ++ G ++ LF + + V SW ++ + E + +F
Sbjct: 115 ESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKR 174
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + +PNE ++ +L ACA L D G++VH G + + NAL+DMY K G
Sbjct: 175 MVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGR 234
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+E+ VF M VSW+++I G +H M + G PN T L A
Sbjct: 235 IEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKA 294
Query: 204 CSHVGLVDKGRALLTI---MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
C+ +GL D GR + + + D + V L+DL S+ +++AR M
Sbjct: 295 CAAMGLKDLGRQIHSCSVKIDSDSDLFVAVG----LIDLYSKCEMMDDARRAYDLMPTKD 350
Query: 261 NRVVWGALLGG 271
+ + AL+ G
Sbjct: 351 HIIAGNALISG 361
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N ++ G + A FS +PQR + SW+++I GLA+ G +EAL +F++M
Sbjct: 522 DIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQML 581
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGK 113
KD PN +T+V+VL AC G + GK
Sbjct: 582 KDCVSPNHITLVSVLCACNHAGLVNEGK 609
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 353 bits (907), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 266/442 (60%), Gaps = 2/442 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N ++ + V AR +F S+ +++ SWTS+I G+ EAL++F+ +
Sbjct: 486 DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLI 545
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ +P+ +T+V+VL A A L L+ GK +H F GF + N+L+DMY +CG +E
Sbjct: 546 ETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTME 605
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+F +++R ++ W+SMI MH M + P+++TF+ +L+ACS
Sbjct: 606 NARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS 665
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLV +G+ IM+ +Y + P EHY CLVDLL+R+ LEEA + NM + P+ VW
Sbjct: 666 HSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVW 725
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
ALLG CR+H N L E A + L +L+ N G YV++SN +A G+W +V +R +MK
Sbjct: 726 CALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGN 785
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMK-GYIPDTSVVLLD 384
+KK PGCS I ++ +H F+A D++HPQ I+ + +K K GY T +V D
Sbjct: 786 KLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHD 845
Query: 385 LEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREI 444
+ + ++ ++ LY HSE+LAL YGL+ T G +RI KNLR+C+DCHA FK+ SEI R +
Sbjct: 846 VCEEEKTQM-LYGHSERLALGYGLLVTSKGTCLRITKNLRICDDCHAFFKIASEISQRTL 904
Query: 445 VVRDRNRFHCFKDGACTCKDYW 466
VVRD +RFH F+ G C+C D+W
Sbjct: 905 VVRDASRFHHFERGLCSCGDFW 926
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 87/147 (59%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +IA N G + A +F SM ++ SW +++ G+ + M +A+ F +M+
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G KP++V+V+ ++ A + +L G VH +A +G N+++ N+LIDMY KC C++
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMH 172
FE M E+ ++SW+++I G+A +
Sbjct: 405 YMGSAFEYMPEKDLISWTTIIAGYAQN 431
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
V Y+G+A F MP++++ SWT++I G A+ +AL + +++ + + + + ++
Sbjct: 403 VKYMGSA---FEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSI 459
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L+AC+ L + K +H + G L ++ + NA++++Y + ++ VFE + + +
Sbjct: 460 LLACSGLKSEKLIKEIHGYVLKGG-LADILIQNAIVNVYGELALVDYARHVFESINSKDI 518
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW+SMI + +I ++P+ +T + VL+A + + + KG+ +
Sbjct: 519 VSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGF 578
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ R + G+ LVD+ +R G +E AR + N + ++W +++ +H
Sbjct: 579 LIRKGFFLEGLI-ANSLVDMYARCGTMENARNIF-NYVKQRDLILWTSMINANGMH 632
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 2/175 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSS--MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
N +IA G +G AR LF S M + + SW S+I G EAL +F M++ G
Sbjct: 187 NALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG 246
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
+ N T V+ L AC ++ G+ +H + +VYV NALI MY CG +E+
Sbjct: 247 VESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAE 306
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
RVF+ M + VSW++++ G + M G KP+ V+ + ++ A
Sbjct: 307 RVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAA 361
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F M +R + +W ++I G EA++++ EM G + T VL AC
Sbjct: 101 AVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGA 160
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG--MRERTVVSWS 163
+ G +H A G+ V+VCNALI MY KCG L +F+ M + VSW+
Sbjct: 161 FKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWN 220
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
S+I M VG++ N TF+ L AC + GR + ++ +
Sbjct: 221 SIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKS 280
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
V L+ + + G++E+A V +M + + V W LL G
Sbjct: 281 NHFT-DVYVSNALIAMYANCGQMEDAERVFKSM-LFKDCVSWNTLLSG 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVH-RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
P + L CA L G+ +H F K +L +V++ + MY KCG + +
Sbjct: 44 PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
VF+ M ERT+ +W++MI M +G+ + TF VL AC
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC 158
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 258/421 (61%), Gaps = 1/421 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F SMP+ N +W+S++ G + G+ E AL +F + + G + + + + + ACA
Sbjct: 211 ASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAG 270
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L L GK VH + +GF N+YV ++LIDMY KCGC+ E Y VF+G R++V W++M
Sbjct: 271 LATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAM 330
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GF H M + G+ P+ VT++ VL+ACSH+GL ++G +M R++
Sbjct: 331 ISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHN 390
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ P V HY C+VD+L RAG + +A ++I M +WG+LL CR+H NI AE A
Sbjct: 391 LRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFSATSSIWGSLLASCRIHGNIEFAEIAA 450
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
+HL +++ N G +V+++N+YA KWEEV++ R+L++ +KK G S I I +H F
Sbjct: 451 KHLFEMEPDNAGNHVLLANIYAANKKWEEVAKTRKLLRDSELKKDRGTSWIEIKNKIHSF 510
Query: 346 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALV 405
G+ HP I+ + L+ +++ Y DT+ L D+E++K K++ L HSEKLA+
Sbjct: 511 TVGERNHPLINEIYAKLDSLVEELEKLNYKVDTNNDLHDVEESK-KQMLLRHHSEKLAIT 569
Query: 406 YGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
+GL+ + IRIMKNLR+C DCH K V + +REI++RD NRFH FKDG C+C D+
Sbjct: 570 FGLMCLPSNIPIRIMKNLRICGDCHNFMKFVCKSTSREIIIRDTNRFHHFKDGLCSCGDF 629
Query: 466 W 466
W
Sbjct: 630 W 630
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 166/377 (44%), Gaps = 19/377 (5%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G HA+ + + DI T N++I V AR +F MP ++V SW ++I L
Sbjct: 75 GRACHAQFILVGF-ETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALT 133
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ +EAL +F +M ++G+ NE T+ +VL CA + +H F+ N +
Sbjct: 134 RIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHAFSIKVSVDSNCF 193
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V AL+ +Y KC +++ ++FE M E V+WSS++ G+ + +G
Sbjct: 194 VGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMG 253
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ + + AC+ + + +G+ + I + G + L+D+ ++ G + EA
Sbjct: 254 FEQDAFLISSAVCACAGLATLIEGKQVHAISCKS-GFGSNIYVTSSLIDMYAKCGCIREA 312
Query: 250 REVIANMSVPPNRVVWGALLGG-----CRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
V + + V+W A++ G C L I+ + R L +D YV + N
Sbjct: 313 YIVFQGEEL-RSIVLWNAMISGFGRHACALEAMILFEKMQQRGL----FPDDVTYVSVLN 367
Query: 305 VYAEAGKWEEVSRIRRLM-KSRGVKKTPGCSSITID-----GVVHEFVAGDETHPQAKGI 358
+ G E+ + LM + ++ + S +D G+VH+ E P +
Sbjct: 368 ACSHMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFS-AT 426
Query: 359 FEMWEKLLVKMKMKGYI 375
+W LL ++ G I
Sbjct: 427 SSIWGSLLASCRIHGNI 443
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 21/209 (10%)
Query: 78 LKVFSEMEKDGSKPNEVTVV-----------AVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
LK S + S P +V VV +L CA+ G++ H GF
Sbjct: 30 LKNLSIVSLPKSDPLDVNVVDAESTRVSNLQNILQLCAKSRSSIAGRACHAQFILVGFET 89
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
++ N LI+MY KC + + VF+ M ++VVSW++MI M+
Sbjct: 90 DILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQML 149
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY----GCLVDLLSR 242
R G N T VL C+ K L + + I V+ L+ + ++
Sbjct: 150 REGTLFNEFTISSVLCECAF-----KCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAK 204
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGG 271
+++A ++ +M N V W ++L G
Sbjct: 205 CSSIKDASKMFESMP-ETNAVTWSSILAG 232
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/459 (38%), Positives = 276/459 (60%), Gaps = 2/459 (0%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG 67
SCG+ H ++ + + + +++ + G + A+ F +M ++N+ W ++I G
Sbjct: 519 SCGKEIHGSMLRNGFELDEFICIS-LVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMING 577
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
++ +AL +F +M P+E++++ L AC+Q+ L GK +H FA + +
Sbjct: 578 FSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEH 637
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
+V +LIDMY KCGC+E+ +F+ + + V+W+ +I G+ +H M
Sbjct: 638 SFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQN 697
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
G +P+ VTFI +L AC+H GLV +G L M+ +GI P +EHY C+VD+L RAGRL
Sbjct: 698 AGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLN 757
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYA 307
EA E++ + P+ +W +LL CR ++++ + E+ L +L YV++SN YA
Sbjct: 758 EALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYA 817
Query: 308 EAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLV 367
GKW+EV ++R+ MK G++K GCS I I G V F+ GDE+ Q+ I + W +L
Sbjct: 818 RLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEK 877
Query: 368 KMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCE 427
K+ GY PDTS VL +LE+ ++ +I L HSEKLA+ +GL+NT G ++R+ KNLR+C
Sbjct: 878 KINKIGYKPDTSCVLHELEEDEKIKI-LRNHSEKLAISFGLLNTAKGTTLRVCKNLRICV 936
Query: 428 DCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
DCH A KLVS+I+ REI+VRD RFH FK+G C+C DYW
Sbjct: 937 DCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 8/255 (3%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
Q D N +A G + A +F M + V SW ++I G + G +AL ++
Sbjct: 433 QSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLL 492
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G +P+ T+ ++L ACA+L L GK +H NGF + ++C +L+ +YV+CG
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGK 552
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ F+ M E+ +V W++MI GF+ + M+ + P+ ++ IG L A
Sbjct: 553 ILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGA 612
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEH---YGCLVDLLSRAGRLEEAREVIANMSVPP 260
CS V + G+ L + + EH L+D+ ++ G +E+++ + + +
Sbjct: 613 CSQVSALRLGKELHCFAVKSH----LTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHL-K 667
Query: 261 NRVVWGALLGGCRLH 275
V W L+ G +H
Sbjct: 668 GEVTWNVLITGYGIH 682
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 125/268 (46%), Gaps = 12/268 (4%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
GE H + K+ D+ N +IA G+V +A +F MPQRN+ SW SV+Y
Sbjct: 215 GEAVHGFALKTKVLS-DVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACL 273
Query: 70 KCGMCEEALKVFSEM--EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ G+ EE+ +F + +G P+ T+V V+ CA+ G++ G H A G
Sbjct: 274 ENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGE 333
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-I 186
+ V ++L+DMY KCG L E RV E+ V+SW+SMI G++ M +
Sbjct: 334 LKVNSSLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQM 392
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLVDLLSRAGR 245
+K N VT + VL C K + + R +G + E V ++ G
Sbjct: 393 EDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALR-HGFIQSDELVANAFVAGYAKCGS 451
Query: 246 LEEAREVIANMSVPPNRVV--WGALLGG 271
L A V M +++V W AL+GG
Sbjct: 452 LHYAEGVFCGME---SKMVSSWNALIGG 476
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLG 107
+F++ ++N+ W +++ G + + +A+ VF EM P+ T+ V+ AC +
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
D+ G++VH FA L +V+V NALI MY K G +E +VF+ M +R +VSW+S++
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMY 270
Query: 168 GFAMHXXXXXXXXXXXXMIR--VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ ++ G+ P+ T + V+ C+ G V G + + G
Sbjct: 271 ACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALK-LG 329
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ ++ L+D+ S+ G L EAR + + N + W +++GG ++ A E +
Sbjct: 330 LCGELKVNSSLLDMYSKCGYLCEARVLFD--TNEKNVISWNSMIGGYSKDRDFRGAFELL 387
Query: 286 RHLSKLD 292
R + D
Sbjct: 388 RKMQMED 394
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/426 (42%), Positives = 257/426 (60%), Gaps = 1/426 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + +AR F + ++N+ S T V K + E+E GS + T ++L
Sbjct: 415 GRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLL 474
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A +G + G+ +H GF ++ V NALI MY KCG E +VF M + V+
Sbjct: 475 SGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVI 534
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+S+I GFA H M+ G+KPN VT+I VL ACSHVGL+D+ T M
Sbjct: 535 TWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSM 594
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R ++GIVP +EHY C+VDLL R+G L EA E I +M + +VW LG CR+H+N L
Sbjct: 595 RDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKL 654
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
E A + + + + + Y+++SN+YA G+WE+V+ IR+ MK + + K G S I ++
Sbjct: 655 GEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVEN 714
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
VH+F GD HP+A+ I+E ++L +K+K GY+P+T VL D+ED +QKE +L++HSE
Sbjct: 715 QVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVED-EQKEQYLFQHSE 773
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
KLA+ + LI+T IR+ KNLRVC DCH A K +S + REIVVRD NRFH KDG C
Sbjct: 774 KLAVAFALISTPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHHMKDGTC 833
Query: 461 TCKDYW 466
+C DYW
Sbjct: 834 SCNDYW 839
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 116/215 (53%), Gaps = 13/215 (6%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVAC 103
+AR +F M ++NV +WT +I LA+ G +EA+ +F EM G P+ T+ ++ C
Sbjct: 213 SARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVC 272
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
A++ L GK +H + +G + ++ V +L+DMY KCG ++E +VF+GMRE V+SW+
Sbjct: 273 AEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWT 332
Query: 164 SMIVGFAM---HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+++ G+ +++ G+ PN TF GVL AC+ + D G +
Sbjct: 333 ALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQV---- 388
Query: 221 RRDYGIVPGVEHYGC----LVDLLSRAGRLEEARE 251
I G+ C LV + +++GR+E AR+
Sbjct: 389 -HGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARK 422
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 149/312 (47%), Gaps = 22/312 (7%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM--PQRNVRSWTSVIYG 67
G+ H +L +P D N +I A +F SM +R+V S++S+I
Sbjct: 71 GKLLHHKLTTSNLP-LDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISC 129
Query: 68 LAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
A C +A+++F ++ +DG PNE AV+ AC + G + G + F G+
Sbjct: 130 FANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYF- 188
Query: 127 NVYVCNA--LIDMYVKCGC----LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ +VC LIDM+VK GC LE +VF+ MRE+ VV+W+ MI A +
Sbjct: 189 DSHVCVGCELIDMFVK-GCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAID 247
Query: 181 XXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC-LVD 238
M + G P+ T G++ C+ + + G+ L + + R G+V + GC LVD
Sbjct: 248 LFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRS-GLVLDL-CVGCSLVD 305
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ ++ G ++EAR+V M N + W AL+ G + EAMR S + LL G
Sbjct: 306 MYAKCGLVQEARKVFDGMR-EHNVMSWTALVNG-YVRGGGGYEREAMRMFSNM-LLQGG- 361
Query: 299 YVVMSNVYAEAG 310
V N + +G
Sbjct: 362 --VAPNCFTFSG 371
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
Query: 10 GETRHARLMFDKMPQR-DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
GE HA M K+ R D++ N +I+ G AA +F+ M NV +WTS+I G
Sbjct: 486 GEQIHA--MVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGF 543
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL-EFGKSVHRFAKGNGFLRN 127
AK G +AL++F M + G KPN+VT +AVL AC+ +G + E K +G +
Sbjct: 544 AKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPR 603
Query: 128 V--YVCNALIDMYVKCGCLEEGYRVFEGM 154
+ Y C ++D+ + G L E M
Sbjct: 604 MEHYAC--MVDLLGRSGLLSEAIEFINSM 630
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 348 bits (892), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 251/429 (58%), Gaps = 1/429 (0%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G + +AR +F+ +P + +WT+VI G + G E+AL + +M G +P+E T
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
++ AC+ L LE GK +H + +V +L+DMY KCG +E+ Y +F M R
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+V W++MIVG A H M G+ P+ VTFIGVL ACSH GL
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
M++ YG+ P +EHY CLVD LSRAG ++EA +V+++M + ++ LL CR+ +
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
E L +D + YV++SN+YA A +WE R +MK VKK PG S I
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWID 845
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYR 397
+ VH FVAGD +H + I+ E ++ ++K +GY+PDT L+D+E+ + KE L
Sbjct: 846 MKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEE-EDKESALSY 904
Query: 398 HSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKD 457
HSEKLA+ YGL+ T P ++R++KNLRVC DCH A K +S + REIV+RD NRFH F+
Sbjct: 905 HSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRS 964
Query: 458 GACTCKDYW 466
G C+C DYW
Sbjct: 965 GICSCGDYW 973
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 53/334 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS- 60
L+++YA R AR++FD+MP RD+ WN+M+ + +G LFS+ + +R
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Query: 61 ------------------------------------------WTSVIYGLAKCGMCEEAL 78
W + + G EA+
Sbjct: 223 CVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAV 282
Query: 79 KVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
F +M K + +T + +L A L LE GK +H G+ + V V N+ I+MY
Sbjct: 283 DCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMY 342
Query: 139 VKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
VK G + R+F M+E ++SW+++I G A ++R G+ P+ T
Sbjct: 343 VKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTIT 402
Query: 199 GVLHACSHVGLVDK---GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
VL ACS L + GR + T + GIV L+D+ S+ G++EEA + N
Sbjct: 403 SVLRACS--SLEESYCVGRQVHTCALK-AGIVLDSFVSTALIDVYSKGGKMEEAELLFHN 459
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
+ W A++ G + N EA+R S
Sbjct: 460 QD-GFDLASWNAMMHGFTVSDNY---REALRLFS 489
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
++ N I + G V AR +F M + ++ SW +VI G A+ G+ E +L++F ++ +
Sbjct: 332 VSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR 391
Query: 87 DGSKPNEVTVVAVLVACAQLGDLE-FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G P++ T+ +VL AC+ L + G+ VH A G + + +V ALID+Y K G +E
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E +F + SW++M+ GF + M G K + +TF A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 206 HVGLVDKGR---ALLTIMRRDYG--IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+ + +G+ A++ MR Y ++ G+ +D+ + G ++ AR+V N P
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGI------LDMYLKCGEMKSARKVF-NQIPSP 564
Query: 261 NRVVWGALLGGC 272
+ V W ++ GC
Sbjct: 565 DDVAWTTVISGC 576
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF + ++ SW ++++G EAL++FS M + G K +++T
Sbjct: 448 GKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAA 507
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A L L+ GK +H F +++V + ++DMY+KCG ++ +VF + V
Sbjct: 508 KAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDV 567
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTI 219
+W+++I G + M G++P+ TF ++ ACS + +++G+ + I
Sbjct: 568 AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M+ + P V LVD+ ++ G +E+A + M+ + +W A++ G H N
Sbjct: 628 MKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNT-RSVALWNAMIVGLAQHGN-- 682
Query: 280 LAEEAMRHLSKL 291
AEEA+ +++
Sbjct: 683 -AEEALNFFNEM 693
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 32/154 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A +F +M R +A WN MI
Sbjct: 642 LVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV-------------------------- 675
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG-DLEFGKSVHRFAK 120
GLA+ G EEAL F+EM+ G P+ VT + VL AC+ G + K+ K
Sbjct: 676 -----GLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQK 730
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
G + + L+D + G ++E +V M
Sbjct: 731 TYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 348 bits (892), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 251/429 (58%), Gaps = 1/429 (0%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G + +AR +F+ +P + +WT+VI G + G E+AL + +M G +P+E T
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
++ AC+ L LE GK +H + +V +L+DMY KCG +E+ Y +F M R
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+V W++MIVG A H M G+ P+ VTFIGVL ACSH GL
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
M++ YG+ P +EHY CLVD LSRAG ++EA +V+++M + ++ LL CR+ +
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
E L +D + YV++SN+YA A +WE R +MK VKK PG S I
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWID 845
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYR 397
+ VH FVAGD +H + I+ E ++ ++K +GY+PDT L+D+E+ + KE L
Sbjct: 846 MKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEE-EDKESALSY 904
Query: 398 HSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKD 457
HSEKLA+ YGL+ T P ++R++KNLRVC DCH A K +S + REIV+RD NRFH F+
Sbjct: 905 HSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRS 964
Query: 458 GACTCKDYW 466
G C+C DYW
Sbjct: 965 GICSCGDYW 973
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 53/334 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS- 60
L+++YA R AR++FD+MP RD+ WN+M+ + +G LFS+ + +R
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Query: 61 ------------------------------------------WTSVIYGLAKCGMCEEAL 78
W + + G EA+
Sbjct: 223 CVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAV 282
Query: 79 KVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
F +M K + +T + +L A L LE GK +H G+ + V V N+ I+MY
Sbjct: 283 DCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMY 342
Query: 139 VKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
VK G + R+F M+E ++SW+++I G A ++R G+ P+ T
Sbjct: 343 VKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTIT 402
Query: 199 GVLHACSHVGLVDK---GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
VL ACS L + GR + T + GIV L+D+ S+ G++EEA + N
Sbjct: 403 SVLRACS--SLEESYCVGRQVHTCALK-AGIVLDSFVSTALIDVYSKGGKMEEAELLFHN 459
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
+ W A++ G + N EA+R S
Sbjct: 460 QD-GFDLASWNAMMHGFTVSDNY---REALRLFS 489
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
++ N I + G V AR +F M + ++ SW +VI G A+ G+ E +L++F ++ +
Sbjct: 332 VSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR 391
Query: 87 DGSKPNEVTVVAVLVACAQLGDLE-FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G P++ T+ +VL AC+ L + G+ VH A G + + +V ALID+Y K G +E
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E +F + SW++M+ GF + M G K + +TF A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 206 HVGLVDKGR---ALLTIMRRDYG--IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+ + +G+ A++ MR Y ++ G+ +D+ + G ++ AR+V N P
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGI------LDMYLKCGEMKSARKVF-NQIPSP 564
Query: 261 NRVVWGALLGGC 272
+ V W ++ GC
Sbjct: 565 DDVAWTTVISGC 576
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF + ++ SW ++++G EAL++FS M + G K +++T
Sbjct: 448 GKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAA 507
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A L L+ GK +H F +++V + ++DMY+KCG ++ +VF + V
Sbjct: 508 KAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDV 567
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTI 219
+W+++I G + M G++P+ TF ++ ACS + +++G+ + I
Sbjct: 568 AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M+ + P V LVD+ ++ G +E+A + M+ + +W A++ G H N
Sbjct: 628 MKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNT-RSVALWNAMIVGLAQHGN-- 682
Query: 280 LAEEAMRHLSKL 291
AEEA+ +++
Sbjct: 683 -AEEALNFFNEM 693
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 32/154 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A +F +M R +A WN MI
Sbjct: 642 LVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV-------------------------- 675
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG-DLEFGKSVHRFAK 120
GLA+ G EEAL F+EM+ G P+ VT + VL AC+ G + K+ K
Sbjct: 676 -----GLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQK 730
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
G + + L+D + G ++E +V M
Sbjct: 731 TYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 251/429 (58%), Gaps = 1/429 (0%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G + +AR +F+ +P + +WT+VI G + G E+AL + +M G +P+E T
Sbjct: 546 LKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFA 605
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
++ AC+ L LE GK +H + +V +L+DMY KCG +E+ Y +F M R
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+V W++MIVG A H M G+ P+ VTFIGVL ACSH GL
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
M++ YG+ P +EHY CLVD LSRAG ++EA +V+++M + ++ LL CR+ +
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGD 785
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
E L +D + YV++SN+YA A +WE R +MK VKK PG S I
Sbjct: 786 KETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWID 845
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYR 397
+ VH FVAGD +H + I+ E ++ ++K +GY+PDT L+D+E+ + KE L
Sbjct: 846 MKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDTEFALVDIEE-EDKESALSY 904
Query: 398 HSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKD 457
HSEKLA+ YGL+ T P ++R++KNLRVC DCH A K +S + REIV+RD NRFH F+
Sbjct: 905 HSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRS 964
Query: 458 GACTCKDYW 466
G C+C DYW
Sbjct: 965 GICSCGDYW 973
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 140/334 (41%), Gaps = 53/334 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS- 60
L+++YA R AR++FD+MP RD+ WN+M+ + +G LFS+ + +R
Sbjct: 163 LVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD 222
Query: 61 ------------------------------------------WTSVIYGLAKCGMCEEAL 78
W + + G EA+
Sbjct: 223 CVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAV 282
Query: 79 KVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
F +M K + +T + +L A L LE GK +H G+ + V V N+ I+MY
Sbjct: 283 DCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMY 342
Query: 139 VKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
VK G + R+F M+E ++SW+++I G A ++R G+ P+ T
Sbjct: 343 VKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTIT 402
Query: 199 GVLHACSHVGLVDK---GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
VL ACS L + GR + T + GIV L+D+ S+ G++EEA + N
Sbjct: 403 SVLRACS--SLEESYCVGRQVHTCALK-AGIVLDSFVSTALIDVYSKGGKMEEAELLFHN 459
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
+ W A++ G + N EA+R S
Sbjct: 460 QD-GFDLASWNAMMHGFTVSDNY---REALRLFS 489
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 124/252 (49%), Gaps = 13/252 (5%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
++ N I + G V AR +F M + ++ SW +VI G A+ G+ E +L++F ++ +
Sbjct: 332 VSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR 391
Query: 87 DGSKPNEVTVVAVLVACAQLGDLE-FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G P++ T+ +VL AC+ L + G+ VH A G + + +V ALID+Y K G +E
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E +F + SW++M+ GF + M G K + +TF A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 206 HVGLVDKGR---ALLTIMRRDYG--IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+ + +G+ A++ MR Y ++ G+ +D+ + G ++ AR+V N P
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGI------LDMYLKCGEMKSARKVF-NQIPSP 564
Query: 261 NRVVWGALLGGC 272
+ V W ++ GC
Sbjct: 565 DDVAWTTVISGC 576
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF + ++ SW ++++G EAL++FS M + G K +++T
Sbjct: 448 GKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAA 507
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A L L+ GK +H F +++V + ++DMY+KCG ++ +VF + V
Sbjct: 508 KAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDV 567
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTI 219
+W+++I G + M G++P+ TF ++ ACS + +++G+ + I
Sbjct: 568 AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANI 627
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M+ + P V LVD+ ++ G +E+A + M+ + +W A++ G H N
Sbjct: 628 MKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNT-RSVALWNAMIVGLAQHGN-- 682
Query: 280 LAEEAMRHLSKL 291
AEEA+ +++
Sbjct: 683 -AEEALNFFNEM 693
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 32/154 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG A +F +M R +A WN MI
Sbjct: 642 LVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV-------------------------- 675
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG-DLEFGKSVHRFAK 120
GLA+ G EEAL F+EM+ G P+ VT + VL AC+ G + K+ K
Sbjct: 676 -----GLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQK 730
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
G + + L+D + G ++E +V M
Sbjct: 731 TYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 159/364 (43%), Positives = 243/364 (66%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y G+ +A +F++M RD+ +WN +I + +G + +AR+LF MP R + SW
Sbjct: 152 LIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSW 211
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + G +AL VF EM+ G +P+E++++AVL ACAQLG LE GK +H +A
Sbjct: 212 TTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADK 271
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NGFLR +CNALI+MY KCGC++E + +F+ + E+ V+SWS+MI G A H
Sbjct: 272 NGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQL 331
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M +V + PN +TF+GVL ACSH GL D+G +M Y I P +EHYGCL+DLL
Sbjct: 332 FEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLG 391
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R+G L +A + I+ M + P+ +W +LL CR+H+N+ +A A++ L +L+ G YV+
Sbjct: 392 RSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVL 451
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
++N+YAE GKWE+VS IR+L++++ +KKTPG SSI ++ VV EFV+ D++ P ++ +F +
Sbjct: 452 LANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWI 511
Query: 362 WEKL 365
E L
Sbjct: 512 LEGL 515
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 36/271 (13%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK---PNEVT 95
N+G+V A LF + N+ ++ ++I A A+ VF +M + P++ T
Sbjct: 54 NLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFT 113
Query: 96 VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM- 154
V+ +C + G VH G + NALIDMY K G L +VFE M
Sbjct: 114 FPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMS 173
Query: 155 -----------------------RE-------RTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
RE RT+VSW++MI G+
Sbjct: 174 HRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE 233
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M VG++P+ ++ I VL AC+ +G ++ G+ + ++ G + L+++ ++ G
Sbjct: 234 MQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKN-GFLRKTGICNALIEMYAKCG 292
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
++EA + + V + + W ++GG H
Sbjct: 293 CIDEAWNLFDQL-VEKDVISWSTMIGGLANH 322
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 159/364 (43%), Positives = 243/364 (66%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y G+ +A +F++M RD+ +WN +I + +G + +AR+LF MP R + SW
Sbjct: 152 LIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSW 211
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + G +AL VF EM+ G +P+E++++AVL ACAQLG LE GK +H +A
Sbjct: 212 TTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADK 271
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NGFLR +CNALI+MY KCGC++E + +F+ + E+ V+SWS+MI G A H
Sbjct: 272 NGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQL 331
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M +V + PN +TF+GVL ACSH GL D+G +M Y I P +EHYGCL+DLL
Sbjct: 332 FEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLG 391
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R+G L +A + I+ M + P+ +W +LL CR+H+N+ +A A++ L +L+ G YV+
Sbjct: 392 RSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVL 451
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
++N+YAE GKWE+VS IR+L++++ +KKTPG SSI ++ VV EFV+ D++ P ++ +F +
Sbjct: 452 LANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWI 511
Query: 362 WEKL 365
E L
Sbjct: 512 LEGL 515
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 115/271 (42%), Gaps = 36/271 (13%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK---PNEVT 95
N+G+V A LF + N+ ++ ++I A A+ VF +M + P++ T
Sbjct: 54 NLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFT 113
Query: 96 VVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM- 154
V+ +C + G VH G + NALIDMY K G L +VFE M
Sbjct: 114 FPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMS 173
Query: 155 -----------------------RE-------RTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
RE RT+VSW++MI G+
Sbjct: 174 HRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFRE 233
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M VG++P+ ++ I VL AC+ +G ++ G+ + ++ G + L+++ ++ G
Sbjct: 234 MQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKN-GFLRKTGICNALIEMYAKCG 292
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
++EA + + V + + W ++GG H
Sbjct: 293 CIDEAWNLFDQL-VEKDVISWSTMIGGLANH 322
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 172/425 (40%), Positives = 265/425 (62%), Gaps = 7/425 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F MPQR+V +W ++I G G+ EA+ +F +M + G P+ T V+V AC+Q
Sbjct: 170 ARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQ 229
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+G LE G V+ NG NV + +LI+M+ +CG + VF+ + E V++W++M
Sbjct: 230 IGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAM 289
Query: 166 IVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I G+ MH M + G+ PN VTF+ VL AC+H GL+ +GR + MR +Y
Sbjct: 290 ISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEY 349
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANM-SVPPNRVVWGALLGGCRLHKNIVLAEE 283
G+VPG+EH+ C+VD+L +AG L EA + I + V VW A+LG C++HKN L E
Sbjct: 350 GLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKNYDLGVE 409
Query: 284 AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVH 343
A +HL L+ N YV++SN+YA AG+ + V +R +M RG+KK G SSI ++ +
Sbjct: 410 AAQHLISLEPENPSNYVLLSNMYALAGRMDRVESVRNVMIQRGIKKQAGYSSIDVNNKTY 469
Query: 344 EFVAGDETHPQAKGIFEMWEKLLVKMKMKGY--IPDTSVVLLDLEDAKQKEIFLYRHSEK 401
F GD+ HP+ I++ + L+ + K GY IP+++ + + +++E L HSEK
Sbjct: 470 LFRMGDKAHPETNEIYQYLDGLIWRCKEAGYAPIPESA---MHELEEEEREYALRHHSEK 526
Query: 402 LALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACT 461
LA+ +GL+ T G +++I+KNLR+CEDCH+A K +S + NREI++RD+ RFH F++G+C+
Sbjct: 527 LAVAFGLMKTSHGTALKIVKNLRICEDCHSAIKFISVVTNREIIIRDKLRFHHFREGSCS 586
Query: 462 CKDYW 466
C DYW
Sbjct: 587 CLDYW 591
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 4/285 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + R LF S+ + + S+I ++ G + + + M KP+ T +V
Sbjct: 64 GSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSVF 123
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L L+ G +H +GF N +V A++ Y K L +VF+ M +R+VV
Sbjct: 124 KACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVV 183
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W++MI G+ + M +G+ P+ TF+ V ACS +G ++ G + +
Sbjct: 184 AWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSI 243
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ GI V L+++ SR G + AR V ++S N + W A++ G +H V
Sbjct: 244 VSN-GIRVNVILGTSLINMFSRCGDVRRARAVFDSIS-EGNVIAWTAMISGYGMHGYGVE 301
Query: 281 AEEAMRHLSKLDLL--NDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
A E + K L N +V + + A AG E ++ M+
Sbjct: 302 AMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMR 346
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 39/177 (22%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++++ CG+ R AR +FD + + ++ W MI+
Sbjct: 258 LINMFSRCGDVRRARAVFDSISEGNVIAWTAMISG------------------------- 292
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKD-GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
YG+ G+ EA+++F EM+K+ G PN VT VAVL ACA G + G+ V +
Sbjct: 293 ----YGMHGYGV--EAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMR 346
Query: 121 GN-GFLRNV--YVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMH 172
G + + +VC ++DM K G L E Y+ + + E W++M+ MH
Sbjct: 347 EEYGLVPGLEHHVC--MVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMH 401
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/465 (39%), Positives = 269/465 (57%), Gaps = 6/465 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA C + A +F ++ ++ N++I L+ G A+ +F MP R+V +W
Sbjct: 45 LISTYAHCQQPNIAHHVFSRV--MNLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTW 102
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+VI G K +AL +F M K +P+ T +V+ CA+LG K VH
Sbjct: 103 NTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVE 162
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N + AL+DMY KCG ++ VFE + V W++MI G A+H
Sbjct: 163 KKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIHGHALDATVV 222
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + P+ VTF+G+L CSH GLV+ GR +M+ + I P ++HYG +VDLL
Sbjct: 223 FSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLG 282
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG LEEA +I MSV P+ V+W +LL CR+H L E A+ ++S+L+ G +V+
Sbjct: 283 RAGHLEEAYSMIKAMSVEPDVVIWRSLLSACRIHGKKELGEFAIANISRLE---SGDFVL 339
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+Y W R+R +MK GV+K G S I + G +H+F A D++H + K I+ +
Sbjct: 340 LSNMYCSFKNWHGAERVRHMMKKGGVRKKRGKSWIELGGSIHQFNAADQSHAEMKAIYRV 399
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
E L+ + K++G+ P T +VL+D+ + ++KE L HSEKLAL YG++ + PG I I K
Sbjct: 400 LEGLMQRAKLEGFTPLTELVLMDVSE-EEKEANLTFHSEKLALAYGVLKSSPGTKITISK 458
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLR+C+DCH K+VS I NREI+VRDR RFH F+ G C+C DYW
Sbjct: 459 NLRICQDCHNWIKIVSRILNREIIVRDRIRFHQFEGGCCSCGDYW 503
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/456 (40%), Positives = 271/456 (59%), Gaps = 11/456 (2%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
+L FD +I N +I + G + A LF M +R++ SW+++I L K +
Sbjct: 105 KLGFDT----NIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPA 160
Query: 76 EALKVFSEMEKDGSKP-----NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYV 130
EAL VF +M+ G + + +++V+ A + LG +E G VH F G + V +
Sbjct: 161 EALSVFQQMQM-GHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPL 219
Query: 131 CNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
ALI+MY +CG ++ +VF+ M ER VV+W+++I G A+H M G+
Sbjct: 220 GTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGL 279
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
KP+ FIGVL ACSH GLV+ G + MR ++GI P +EHYGC+VDLL RAG + EA
Sbjct: 280 KPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAF 339
Query: 251 EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAG 310
+ + M + PN V+W LLG C H ++ LAE+A + +LD +DG YV++SN Y G
Sbjct: 340 DFVEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVG 399
Query: 311 KWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 370
W + +R MK + K PG S + ID VVHEFV+GD HPQ + I + ++ +K
Sbjct: 400 NWGGKAGLRNSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVK 459
Query: 371 MKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCH 430
+ GY P+TS VL D++D ++KE L HSEKLA+ + L+ + +IR++KNLR+C DCH
Sbjct: 460 LGGYTPNTSSVLHDIQD-EEKEHCLGYHSEKLAVAFVLLYHRDRRTIRVIKNLRICYDCH 518
Query: 431 AAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
K S I +R+I++RDRNRFH F G C+C+D+W
Sbjct: 519 DFMKHASGIFDRDIIIRDRNRFHHFSKGLCSCQDFW 554
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 242/386 (62%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG+ +ARL+FD+M R++ +WN MI + G V A LF +P +NV SW
Sbjct: 132 LIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSW 191
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T VI G K EEAL+ F EM+ G P+ VTV+A++ ACA LG L G VHR
Sbjct: 192 TVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMK 251
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
F NV V N+LIDMY +CGC+E +VF+GM +R +VSW+S+IVGFA++
Sbjct: 252 KEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSF 311
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + G++PN V++ L ACSH GL+D+G + ++RD+ P +EHYGCLVDL S
Sbjct: 312 FRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYS 371
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAGRL+EA +VI M + PN VV G+LL CR ++ LAE+ M++ +L D YV+
Sbjct: 372 RAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVL 431
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
SN+YA GKW+ S++RR MK RG++K SSI ID +H+FV+GD+ H + I+
Sbjct: 432 FSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSA 491
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLED 387
E L ++ + GY+PD S D++D
Sbjct: 492 LELLSFELHLYGYVPDFSGKESDVDD 517
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 39/248 (15%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQL---GDLEFGKSVH 116
SWTS I K +A F +M + +PN +T++ +L ACA + FG ++H
Sbjct: 54 SWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAALH 113
Query: 117 RFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV-------- 167
A +GF + +V V ALIDMY KCG L+ VF+ M R +VSW++MI
Sbjct: 114 THAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDV 173
Query: 168 -----------------------GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
GF M G+ P++VT I ++ AC
Sbjct: 174 DDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISAC 233
Query: 205 SHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
+++G + G + +M++++ V+ L+D+ +R G +E AR+V MS N V
Sbjct: 234 ANLGALGLGLWVHRLVMKKEFR--DNVKVLNSLIDMYARCGCIELARQVFDGMS-QRNLV 290
Query: 264 VWGALLGG 271
W +++ G
Sbjct: 291 SWNSIIVG 298
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 252/441 (57%), Gaps = 1/441 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D + +I G + + +F + +N +W ++ A G EEALK + M
Sbjct: 686 DTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMR 745
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
DG ++ + L L L+ G+ +H + GF + YV NA +DMY KCG ++
Sbjct: 746 NDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEID 805
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ +R+ + R+ SW+ +I A H M+ +G+KP++VTF+ +L ACS
Sbjct: 806 DVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACS 865
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLVD+G + M ++G+ +EH C++DLL R+GRL EA I M VPPN VW
Sbjct: 866 HGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVW 925
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
+LL C++H N+ L +A L +L+ +D YV+ SNV A +W +V +R+ M+S+
Sbjct: 926 RSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQ 985
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
+KK P CS I + V F GD+ HPQ+ I+ E+L + +G++PDTS L D
Sbjct: 986 SLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQD- 1044
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
D +QKE L+ HSE++AL +GLIN+ G +RI KNLRVC DCH+ FKLVS+I R+IV
Sbjct: 1045 TDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIV 1104
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
VRD RFH F G C+C DYW
Sbjct: 1105 VRDSYRFHHFHGGKCSCSDYW 1125
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 134/286 (46%), Gaps = 11/286 (3%)
Query: 22 MPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVF 81
+ ++ N +I+ N V A +F++M +R+ SW S+I A G EE+L F
Sbjct: 381 LDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHF 440
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
M + K + +T+ A+L AC L++G+ +H +G NV VCN+L+ MY +
Sbjct: 441 FWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQA 500
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G E+ VF M R ++SW+SM+ M++ NYVTF L
Sbjct: 501 GSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTAL 560
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
AC ++ + A + + ++ G LV + + G ++EA++V M P
Sbjct: 561 SACYNLEKLKIVHAFVIHFAVHHNLIIG----NTLVTMYGKFGLMDEAQKVCKIM---PE 613
Query: 262 R--VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
R V W AL+GG K+ +A + + LL++ Y+ + N+
Sbjct: 614 RDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSN--YITIVNL 657
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA + D + Q T N ++ G + A+ +F M RN SW ++I G
Sbjct: 166 GKALHALCVKDVIQQNTFYT-NTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL-EFGKSVHRFAKGNGFLRNV 128
+ G +A++ F M ++G P+ + +++ AC + G + E + +H + G + NV
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
+V +L+ Y G + E ++FE + E +VSW+S++V +A + +
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
G+ T V+ C G G +L + + V L+ + +EE
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404
Query: 249 AREVIANMSVPPNRVVWGALL 269
A V NM + + W +++
Sbjct: 405 ASRVFNNMQ-ERDTISWNSII 424
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 7/233 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V A LF + + N+ SWTS++ A G +E L ++ + +G T+ V+
Sbjct: 298 GSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVI 357
Query: 101 VACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
C GD G + +G +V V N+LI M+ +EE RVF M+ER
Sbjct: 358 RTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDT 417
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SW+S+I A + M R K +Y+T +L AC + GR L +
Sbjct: 418 ISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGL 477
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLG 270
+ + G+ V L+ + ++AG E+A V M P R + W +++
Sbjct: 478 ITKS-GLESNVCVCNSLLSMYAQAGSSEDAELVFHTM---PARDLISWNSMMA 526
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 32/308 (10%)
Query: 5 LYASCGETRHAR-------LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L +CG +H + L+ + ++ N +++ G A +F +MP R+
Sbjct: 458 LLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARD 517
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ SW S++ + G A+ + EM K N VT L AC L L K VH
Sbjct: 518 LISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHA 574
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
F N+ + N L+ MY K G ++E +V + M ER VV+W+++I G A
Sbjct: 575 FVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNA 634
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHAC-SHVGLVDKGRALLTIMRRDYGIVPGVEH---- 232
M R G+ NY+T + +L C S L+ G + + +V G E
Sbjct: 635 TIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPI-----HAHIVVAGFELDTYV 689
Query: 233 YGCLVDLLSRAGRLEEAR---EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
L+ + ++ G L + +V+AN N W A+ + + EEA++ ++
Sbjct: 690 QSSLITMYAQCGDLNTSSYIFDVLAN----KNSSTWNAIFSA---NAHYGPGEEALKFIA 742
Query: 290 KLDLLNDG 297
++ NDG
Sbjct: 743 RMR--NDG 748
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 115/268 (42%), Gaps = 5/268 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + A+ + MP+R+V +W ++I G A ++ F+ M ++G
Sbjct: 589 NTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLL 648
Query: 91 PNEVTVVAVLVACAQLGDL-EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
N +T+V +L C L + G +H GF + YV ++LI MY +CG L
Sbjct: 649 SNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSY 708
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+F+ + + +W+++ A + M G+ + +F L ++ +
Sbjct: 709 IFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTV 768
Query: 210 VDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
+D+G+ L + I++ + + V +D+ + G +++ ++ + R W L
Sbjct: 769 LDEGQQLHSWIIKLGFELDEYV--LNATMDMYGKCGEIDDVFRILPIPKIRSKR-SWNIL 825
Query: 269 LGGCRLHKNIVLAEEAMRHLSKLDLLND 296
+ H A EA + L L D
Sbjct: 826 ISALARHGFFRQATEAFHEMLDLGLKPD 853
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 1/166 (0%)
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+++ + GK++H + +N + N L++MY K G ++ VF+ M +R SW+
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+MI GF M G+ P+ ++ AC G + +G +
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVK 277
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
G++ V L+ G + EA ++ + PN V W +L+
Sbjct: 278 CGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/427 (41%), Positives = 258/427 (60%), Gaps = 7/427 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE---EALKVFSEMEKDGSKPNEVTVVAV 99
+G A +F +NV WT+++ G CG+ + EAL+VFSEM + PNE + +
Sbjct: 278 MGDACKVFGETVCKNVVVWTALLTG---CGLNDKHVEALEVFSEMMRFNVVPNESSFTSA 334
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L +C L DLE G+ +H G VY N+L+ MY KCG + + VF+G+ E+ V
Sbjct: 335 LNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNV 394
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW+S+IVG A H M+R G++ + +T G+L ACS G++ K R
Sbjct: 395 VSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGY 454
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
R + VEHY C+VD+L R G +EEA + +M V N +VW LL CR+H ++
Sbjct: 455 FARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLD 514
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
+AE A + + +++ YV++SN+YA + +W EV+RIR MK G+ K PG S IT+
Sbjct: 515 VAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLK 574
Query: 340 GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHS 399
G+ HEF++ D +HP + I+E L VK++ GYIPD L D+E + +E+ Y HS
Sbjct: 575 GMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDVEIEQNEEMLSY-HS 633
Query: 400 EKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGA 459
E+LA+ +GL++T G +I IMKNLRVC DCH A L+++I NREIVVRD +RFH FK+G
Sbjct: 634 ERLAIAFGLLSTVEGSTITIMKNLRVCGDCHTAITLMAKIVNREIVVRDSSRFHHFKNGI 693
Query: 460 CTCKDYW 466
C+C DYW
Sbjct: 694 CSCGDYW 700
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 19/298 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMP--QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
++H + S G A F+ MP +D+ATWN M+ N G V A LF MP R+V
Sbjct: 131 IIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVI 190
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
SWTS+I GL + G +AL F M G + T+V L A A++ D G +H
Sbjct: 191 SWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCC 250
Query: 119 AKGNGFLRNV--YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
GF + +V +L+ Y C + + +VF + VV W++++ G ++
Sbjct: 251 MFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHV 310
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY--- 233
M+R + PN +F L++C + ++KGR + GI G+E+
Sbjct: 311 EALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVI-----HAAGIKMGLENAVYT 365
Query: 234 -GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHK----NIVLAEEAMR 286
LV + S+ G + +A V + N V W +++ GC H +VL +E +R
Sbjct: 366 GNSLVVMYSKCGFIGDALCVFKGI-CEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLR 422
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQ--RDIATWNIMI-AHLINVGYVGAARDLFSSMPQRNV 58
LL YA A +F+++P +D +WN +I A +I +V A + LF MPQRN
Sbjct: 67 LLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVK-LFDEMPQRNS 125
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
SWT++I+G G EA + F+ M
Sbjct: 126 ISWTTIIHGFLSTGRVNEAERFFNAMPYVD------------------------------ 155
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
++V NA+++ Y G + + R+F M R V+SW+S+IVG +
Sbjct: 156 -------KDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQA 208
Query: 179 XXXXXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY--GC 235
M+ G+ + T + L A + + G + M + +G G++ +
Sbjct: 209 LFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFK-FGFCCGLDEFVSAS 267
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
LV + R+ +A +V +V N VVW ALL GC L+ V A E + + +++
Sbjct: 268 LVTFYASCKRMGDACKVFGE-TVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVV 325
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ + T N ++ G++G A +F + ++NV SW SVI G A+ G AL +F E
Sbjct: 360 ENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKE 419
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAKGNGFLRNV--YVCNALIDMYVK 140
M ++G + +E+T+ +L AC++ G L+ + FA+ V Y C ++D+ +
Sbjct: 420 MLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYAC--MVDVLGR 477
Query: 141 CGCLEEG 147
CG +EE
Sbjct: 478 CGEVEEA 484
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 335 bits (860), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/465 (37%), Positives = 259/465 (55%), Gaps = 16/465 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG A + +P + N + P+ + SW
Sbjct: 307 LVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVT---------------CKEPKARMVSW 351
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+S++ G G E+ +K F M + + TV ++ ACA G LEFGK +H + +
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK 411
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G + YV ++LIDMY K G L++ +FE ++E VV W+SMI G A+H
Sbjct: 412 IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISL 471
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ +G+ PN VTF+GVL+ACSHVGL+++G +M+ Y I P VEHY +V+L
Sbjct: 472 FEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYG 531
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG L EA+ I S+ VW + L CRLHKN + + L + + Y++
Sbjct: 532 RAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYIL 591
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+ + +W+E + +R LM RGVKK PG S + + +H F GD +HPQ K I+
Sbjct: 592 LSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSY 651
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
+ L+ ++K GY D +V+ D+E+ +Q E+ + HSEKLALV+ +INT P IRIMK
Sbjct: 652 LDSLIGRLKEIGYSLDAKLVMQDVEE-EQGEVLISHHSEKLALVFSIINTSPRTPIRIMK 710
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
NLR+C DCH FK S++ REI+VRD +RFH FK +C+C +YW
Sbjct: 711 NLRICNDCHNFFKYASQLLEREIIVRDTHRFHHFKQSSCSCGEYW 755
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 168/343 (48%), Gaps = 27/343 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L LY C E +A F+ M ++D+ +WNIMI + G V + ++F + P ++V SW
Sbjct: 175 ILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSW 234
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I GL +CG AL+ M G++ + VT L+ + L +E G+ +H
Sbjct: 235 NTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLT 294
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM----------------RERTVVSWSSM 165
G + Y+ ++L++MY KCG +++ + + + + +VSWSSM
Sbjct: 295 FGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSM 354
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
+ G+ + M+ + + T ++ AC++ G+++ G+ + +++
Sbjct: 355 VSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK--- 411
Query: 226 IVPGVEHY--GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH---KNIVL 280
I ++ Y L+D+ S++G L++A + + PN V+W +++ GC LH K +
Sbjct: 412 IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALHGQGKEAIS 470
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
E M +L + N+ +V + N + G EE R R+MK
Sbjct: 471 LFEGMLNLGIIP--NEVTFVGVLNACSHVGLIEEGCRYFRMMK 511
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 5/173 (2%)
Query: 2 LLHLYASCGETRHARLM----FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
LH S G R + F K + + + N ++ + + A LF + +N
Sbjct: 38 FLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKN 97
Query: 58 VRSWTSVIYGLAKC-GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
++WT +I G A+ G E +F EM+ DG+ PN+ T+ +VL C++ +++FGK +H
Sbjct: 98 TQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIH 157
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
+ NG +V + N+++D+Y+KC E FE M E+ VVSW+ MI +
Sbjct: 158 AWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAY 210
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 175/473 (36%), Positives = 271/473 (57%), Gaps = 9/473 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLF----SSM 53
L+ Y+ G+ A + ++M + D+ TWN +++ G + A + SS
Sbjct: 466 LISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSG 525
Query: 54 PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
NV SWT++I G ++ +ALK+FS+M+ + KPN T+ ++L ACA L+ G+
Sbjct: 526 ITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGE 585
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
+H F+ GF+ ++YV ALIDMY + G L+ Y VF ++E+T+ W+ M++G+A+H
Sbjct: 586 ELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHS 645
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
M ++P+ +TF +L AC + GLVD+G M+ DY IVP +EHY
Sbjct: 646 HGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHY 705
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
C+VDLL ++G L+EA I M + P+ +WGALL C++HKNI LAE A R L K++
Sbjct: 706 CCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEP 765
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
N YV+M N+Y+ +W V R++ M +K P S ++ +H F HP
Sbjct: 766 NNSANYVLMMNLYSSLNRWVAVERLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGRPHP 825
Query: 354 QAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKP 413
+ I+ +L+ +++ GY PD + V +++D +KE L H+EKLA+VYG++ K
Sbjct: 826 EEGEIYFELYQLISEIRKLGYAPDLNCVCQNIDD-NEKEKILMSHTEKLAMVYGVMKMKG 884
Query: 414 GMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
G IRI+KN R+C DCH K +S + REI++RD RFH FK+G C C D W
Sbjct: 885 GSPIRIVKNTRICFDCHTVAKYISLVRKREILLRDGGRFHHFKNGKCACNDRW 937
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 153/323 (47%), Gaps = 16/323 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMP--QRDIATWNIMIAHLINVGYVGAARDLFS-----SMP 54
++ +Y+ + AR +FD M R++++WN +I G + A D S
Sbjct: 296 IISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGI 355
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
+ ++ +W S++ G G E L F + G KP+ +V + L A +LG + GK
Sbjct: 356 KPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKE 415
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
+H + + +VYVC +L+DMYVK CLE+ V + + V +W+S+I G++
Sbjct: 416 IHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQ 475
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR--DYGIVPGVEH 232
M+ G+ P+ VT+ G++ S G +D+ LTI+ R GI P V
Sbjct: 476 FGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEA---LTIINRIKSSGITPNVVS 532
Query: 233 YGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
+ L+ S+ + +A ++ + M +V PN +LL C + EE
Sbjct: 533 WTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSM 592
Query: 290 KLDLLNDGYY-VVMSNVYAEAGK 311
KL ++D Y + ++Y+EAGK
Sbjct: 593 KLGFVDDIYVATALIDMYSEAGK 615
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 136/337 (40%), Gaps = 49/337 (14%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ A +F P + W +++ + + AL++F +M++D +K T V +L A
Sbjct: 205 IDKANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQA 264
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT---- 158
C +L L GK +H +A G + N VCN++I MY + + VF+ M + +
Sbjct: 265 CGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLS 324
Query: 159 ----------------------------------VVSWSSMIVGFAMHXXXXXXXXXXXX 184
+++W+S++ G+ +
Sbjct: 325 SWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRGSFEMVLTSFRS 384
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGC--LVDLLS 241
+ +G KP+ + L A +G G+ + IMR + + Y C LVD+
Sbjct: 385 LHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNL----NYDVYVCTSLVDMYV 440
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND-GYYV 300
+ LE+A+ V+ + + N W +L+ G A + + + + + D +
Sbjct: 441 KNDCLEKAQAVL-HRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWN 499
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
+ + Y+ G+ +E I +KS G+ TP S T
Sbjct: 500 GLVSGYSMQGRIDEALTIINRIKSSGI--TPNVVSWT 534
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 12/268 (4%)
Query: 14 HARLMFDKMPQR-DIATWN-IMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKC 71
HA+++ K P+ + AT + M+ + + G +A +F RN W S +
Sbjct: 74 HAQII--KTPKNYNFATIDGTMMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEFESF 131
Query: 72 GMCE-EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYV 130
G E L VF+EM G + + VL C L + FG VH GF +V++
Sbjct: 132 GGDPFEILVVFNEMYSKGVEFDSKAFTFVLKICLALREFLFGLEVHACLIKKGFHVDVHL 191
Query: 131 CNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM 190
ALI+ Y KC +++ +VF + W+++++ M R
Sbjct: 192 SCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSA 251
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
K T + +L AC + +++G+ L R +G+V ++ + SR R + AR
Sbjct: 252 KATVGTTVKMLQACGKLKALNEGKQLHGYALR-FGLVSNTLVCNSIISMYSRNSRFKLAR 310
Query: 251 EVIANMS------VPPNRVVWGALLGGC 272
V +M N V++ + GC
Sbjct: 311 AVFDSMEDHSRNLSSWNSVIFSYAVDGC 338
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 332 bits (850), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/505 (35%), Positives = 272/505 (53%), Gaps = 46/505 (9%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGY------------VGAARD 48
+++ Y G +A+ +FD+M +R++ATWN M+ L+ G +G D
Sbjct: 149 IMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLFSRMNVLGFVPD 208
Query: 49 LFSS---------------------------------MPQRNVRSWTSVIYGLAKCGMCE 75
+S MP N+ +W +++ G A+ +
Sbjct: 209 EYSFGSVLRGCAHLRALSVGDRFTLMLRNVGERIIKWMPNCNLVAWNTLMAGKAQNRCFD 268
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
L + M+ G +P+ +T V+V+ +C++L L GK +H G V V ++L+
Sbjct: 269 GVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVTVISSLV 328
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
MY KCG L++ + F ER VV WSSMI + H + M N V
Sbjct: 329 SMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEV 388
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
TF+ +L+ACSH GL DKG +M YG+ +EHY C+VDLL R+G LEEA +I +
Sbjct: 389 TFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETIIRS 448
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
M V + ++W LL C++HKN +A + ++D + YV+++ ++A A +W+ V
Sbjct: 449 MPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNV 508
Query: 316 SRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
S +RR MK + VKK PG S + + VH+F GDE+H + I + E+L +MKM+GY+
Sbjct: 509 SEVRRAMKDKMVKKEPGVSWVEVKNQVHQFHMGDESHSKFVEINQYLEELTSEMKMQGYV 568
Query: 376 PDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKL 435
PD S VL D+ D ++KE L HSEKLA+ + L+ G IR+MKN+RVC DCH A K
Sbjct: 569 PDISSVLHDM-DNEEKEYNLTHHSEKLAIAFALMTIPKGEPIRVMKNMRVCGDCHVAIKY 627
Query: 436 VSEIENREIVVRDRNRFHCFKDGAC 460
+SEI+N EI+VRD +RFH FK+G C
Sbjct: 628 ISEIKNLEIIVRDSSRFHHFKNGRC 652
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 27/274 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+ Y+ GE +A +FD+MP+R+ + NIMI + +G + A++LF M +RNV +W
Sbjct: 119 LLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATW 178
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ GL K G+ EEAL +FS M G P+E + +VL CA L L G RF
Sbjct: 179 NAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGD---RFTL- 233
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
LRNV G R+ + M +V+W++++ G A +
Sbjct: 234 --MLRNV------------------GERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDH 273
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G +P+ +TF+ V+ +CS + + +G+ + + + G V LV + S
Sbjct: 274 YCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKA-GASSVVTVISSLVSMYS 332
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ G L+++ + + V+W +++ H
Sbjct: 333 KCGSLQDSIKAFLECE-ERDVVLWSSMIAAYGFH 365
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 168/444 (37%), Positives = 261/444 (58%), Gaps = 4/444 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQ--RNVRSWTSVIYGLAKCGMCEEALKVFSE 83
++ N ++ G+V +A LFS MP+ +++ SW S++ A+ GM EA F
Sbjct: 181 EVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDM 240
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M +G P++ T+V++L AC + +H G N+ + L+++Y K G
Sbjct: 241 MRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGR 300
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLH 202
L +VFE + + V+W++M+ G+AMH ++R GM+P++VTF +L
Sbjct: 301 LNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLS 360
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACSH GLV +G+ +M Y + P ++HY C+VDLL R G L++A E+I NM PN
Sbjct: 361 ACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNS 420
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
VWGALLG CR+H+NI L +EA ++L LD + Y+++SN+Y+ AG W + S++R LM
Sbjct: 421 GVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDASKVRTLM 480
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
K++ + + GCS I +H FV D THP + I + E+++ K++ G++ +T +L
Sbjct: 481 KNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVHETESIL 540
Query: 383 LDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENR 442
D+ D + K + +HSEK+AL YGL+ T M + I+KNLR+C DCH K VS +E R
Sbjct: 541 HDV-DEEVKIDMITKHSEKIALAYGLLVTNADMPLVIIKNLRICRDCHNTVKFVSMVEKR 599
Query: 443 EIVVRDRNRFHCFKDGACTCKDYW 466
I++RD RFH F G C+C DYW
Sbjct: 600 TIIIRDTKRFHQFSGGLCSCGDYW 623
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
R+ ++ + L+ Y+K G ++ Y +F+ M ++ VSW+S++ G A M
Sbjct: 78 RDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKM 137
Query: 186 IRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
+K N TF+ V+ AC D+G + + G+V V+ LV++ + G
Sbjct: 138 KSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMK-LGLVYEVKVVNALVNMYGKFG 196
Query: 245 RLEEAREVIANMSVPPNRVV-WGALLGGC 272
+E A + + M +V W +++ C
Sbjct: 197 FVESAFRLFSEMPESEKSIVSWNSIVAVC 225
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/362 (44%), Positives = 236/362 (65%), Gaps = 2/362 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA G + AR +FD+M +++ATWN M+A G + A +LF MP RNV SW
Sbjct: 120 LLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSW 179
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T+++ G + E+AL +F ME++ PNEVT+ +VL ACA LG LE G+ V +A+
Sbjct: 180 TTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYAR 239
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-RERTVVSWSSMIVGFAMHXXXXXXX 179
NGF +N++VCNA+++MY KCG ++ ++VF+ + R R + SW+SMI+G A+H
Sbjct: 240 KNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAI 299
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+R G P+ VTF+G+L AC+H G+V+KG+ + M RD+ I+P +EHYGC+VDL
Sbjct: 300 QLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDL 359
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAGRL EA EVI M + P+ V+WG LLG C H N+ LAE A L L+ N G Y
Sbjct: 360 LGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNY 419
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V++SN+YA AGKW+ V+++R++MK + KT G S I G +H+F+ D +H ++ IF
Sbjct: 420 VILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESSEIF 479
Query: 360 EM 361
+
Sbjct: 480 AL 481
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 124/299 (41%), Gaps = 40/299 (13%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ +I I+I L+ + + A+ L + + +I C + ++S+
Sbjct: 13 RNNIDNTKILIEKLLQIPNLNYAQVLLHHSQKPTTFLYNKLIQA---CSSKHQCFTLYSQ 69
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G PN+ T + C L L G+ +H +GF +V+ AL+DMY K GC
Sbjct: 70 MYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGC 129
Query: 144 LEEGYRVFEGMR-------------------------------ERTVVSWSSMIVGFAMH 172
L+ VF+ M R VVSW++M+ G+ +
Sbjct: 130 LKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQN 189
Query: 173 XXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
M R + PN VT VL AC+++G ++ G+ + R++ G +
Sbjct: 190 KQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKN-GFFKNLF 248
Query: 232 HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC----RLHKNIVLAEEAMR 286
++++ ++ G+++ A +V + N W +++ G + HK I L ++ +R
Sbjct: 249 VCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLR 307
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 255/423 (60%), Gaps = 6/423 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ A ++F S+ +N+ SWTS+I GL C +AL F EM + KPN VT+V VL A
Sbjct: 453 IDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMRR-QKPNWVTLVCVLSA 511
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
CA++G GK +H +A G + Y+ NA++DMYV+CG +E ++ F + ++ V +W
Sbjct: 512 CARIGAFTCGKEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSI-DQDVSTW 570
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+ ++ G+A M+ + PN VTFI +L ACS G+V +G M+
Sbjct: 571 NILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMKY 630
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
Y I P ++HY C+VDLL RAG+LE+A E I + + P+ VWGALL CR+H+ + L E
Sbjct: 631 KYSIKPNLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVWGALLNACRIHRRVELGE 690
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
A +++ D + GYY+++SN+YA+ W++V+ +R++M+ G+ PGCS + G V
Sbjct: 691 LAAKNIFHDDTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQNGIIVDPGCSWVENKGTV 750
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI-PDTSVVLLDLEDAKQKEIFLYRHSEK 401
H F++GD HPQ K I + E+ KMK G P++S +D+ +A + +IF HSE+
Sbjct: 751 HAFLSGDNFHPQIKEINALLERFYEKMKEAGIQGPESS--HMDIMEASKADIFC-GHSER 807
Query: 402 LALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACT 461
A+ +GLIN+ PGM I + KNL +C+ CH K +S+ REI VRD RFH FK G C+
Sbjct: 808 FAIGFGLINSAPGMPIWVTKNLYMCQSCHNTVKFISKEVRREISVRDAERFHHFKGGICS 867
Query: 462 CKD 464
C D
Sbjct: 868 CMD 870
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 143/283 (50%), Gaps = 13/283 (4%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G H +M K RD + +N +I +VG V A +FS R+V WT++I G
Sbjct: 320 GREIHGYVMRTKF-SRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYE 378
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
M ++AL+ + ME +G P+E+T+ VL AC+ L DL+ G ++H AK G + V
Sbjct: 379 NNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVI 438
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V N LIDMY KC C+++ VF +R++ ++SW+S+I+G ++ M+R
Sbjct: 439 VANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMR-R 497
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR----DYGIVPGVEHYGCLVDLLSRAGR 245
KPN+VT + VL AC+ +G G+ + R D G +P ++D+ R GR
Sbjct: 498 QKPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMPNA-----VLDMYVRCGR 552
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
+E A + S+ + W LL G LA E R +
Sbjct: 553 MEYAWKQF--FSIDQDVSTWNILLTGYAERGKGTLATELFRRM 593
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 132/265 (49%), Gaps = 7/265 (2%)
Query: 22 MPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVF 81
M + N++++ + G + A +F MP+RN+ SW ++ G AK G +EAL ++
Sbjct: 129 MTHLSVKLGNVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLY 188
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
M G +P+ T VL C + DL G+ +H GF +V V NALI MY KC
Sbjct: 189 DRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKC 248
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G ++ VF+ M ++ +SW++MI G + MI + P+ +T V+
Sbjct: 249 GDIDTARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVI 308
Query: 202 HACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
AC +G GR + +MR + P V Y L+ + S G +EEA +V +
Sbjct: 309 TACELIGDERLGREIHGYVMRTKFSRDPSV--YNSLIQMYSSVGLVEEAEKVFSQTEC-R 365
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAM 285
+ V+W A++ G ++N ++ ++A+
Sbjct: 366 DVVMWTAMISG---YENNLMHQKAL 387
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 167/433 (38%), Positives = 250/433 (57%), Gaps = 2/433 (0%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
+L+ K ++ N +++ V A +F ++ ++ +W ++I G A+ G
Sbjct: 344 KLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVN 403
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
EAL +F M+ KP+ T+VAV+ A A L K +H A +VYV ALI
Sbjct: 404 EALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVATALI 463
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
DMY KCG + ++F+ M ER V++W++MI G+ H M + + PN
Sbjct: 464 DMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEAVIPNDT 523
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
TF+ V+ ACSH G V++G M+ DYG+ P ++HY +VDLL RAG+L A +I
Sbjct: 524 TFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLLGRAGKLHGAWNLIEE 583
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
M + P V GA+LG C++HKN+ L E+A L +LD GY+V+++N+Y A W++V
Sbjct: 584 MPIKPGITVLGAMLGACKIHKNVELGEKAADKLFELDPDEGGYHVLLANMYVSASMWDKV 643
Query: 316 SRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
+++R M+ +G+ KTPGCS + + VH F +G HPQAK I+ E L K++ GYI
Sbjct: 644 AKVRTAMEKKGIHKTPGCSFVELRNEVHTFYSGSTNHPQAKKIYAFLEALGDKIRDAGYI 703
Query: 376 PDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKL 435
PDT+ + D+E+ K KE L HSE+LA+ +GL+NT G I + KNLRVC DCH K
Sbjct: 704 PDTNSI-HDVEE-KVKEQLLSSHSERLAIAFGLLNTNHGTPIHVRKNLRVCGDCHDVTKY 761
Query: 436 VSEIENREIVVRD 448
+S + REI+VRD
Sbjct: 762 ISLVTGREIIVRD 774
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 127/236 (53%), Gaps = 6/236 (2%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ G + A +F + ++++ SWTS+I G A+ G + AL +F M++ G K + VT+V
Sbjct: 164 VKCGEIDDAFKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLV 223
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
++L A A + DL GKS+H +A GF V V NAL+ MY +CGC VFEGM +
Sbjct: 224 SILPAVADIKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINK 283
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL- 216
VSW++MI G+A M+ G++P V + L AC+ +G +++GR +
Sbjct: 284 CAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVH 343
Query: 217 -LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L + ++ VP + L+ + S+ R++ A + N+ N V W A++ G
Sbjct: 344 KLVLQKKLDFEVPVM---NSLLSMYSKCKRVDLAASIFENLKKKTN-VTWNAMILG 395
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 19/309 (6%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ ++ N ++ G AR +F M + SW ++I G A+ G EEA F +
Sbjct: 251 ESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLK 310
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M +G +P V ++A L ACA LGDLE G+ VH+ V V N+L+ MY KC
Sbjct: 311 MLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKR 370
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
++ +FE ++++T V+W++MI+G+A + M +KP+ T + V+ A
Sbjct: 371 VDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITA 430
Query: 204 CSHVGLVD-----KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
+ + + G A+ T M D + L+D+ ++ G + AR++ +M
Sbjct: 431 LADLSVNRMAKWIHGLAIRTFMDNDVYVATA------LIDMYAKCGATQTARKLF-DMMH 483
Query: 259 PPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD----LLNDGYYVVMSNVYAEAGKWEE 314
+ + W A++ G H L +EA+ + + ND ++ + + + +G EE
Sbjct: 484 ERHVITWNAMIDGYGTHG---LGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEE 540
Query: 315 VSRIRRLMK 323
+ MK
Sbjct: 541 GLHFFQSMK 549
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I G + A +F ++ + + +++ G AK +AL + M+ DG +P
Sbjct: 58 LINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPV 117
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+L C + +LE G+ +H NGF +++ ++ YVKCG +++ ++VFE
Sbjct: 118 VYDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFE 177
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
+ E+ +VSW+S+I G+A + M G+K + VT + +L A + + +
Sbjct: 178 RLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRI 237
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
G+++ R G V L+ + G AR V M + V W ++ G
Sbjct: 238 GKSIHGYALR-LGFESKVSVINALLYMYFECGCERIARLVFEGM-INKCAVSWNTMIDG- 294
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDG 297
+ I +EEA L +L++G
Sbjct: 295 --YAQIGKSEEAFATF--LKMLDEG 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 32/154 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG T+ AR +FD M +R + TWN MI
Sbjct: 462 LIDMYAKCGATQTARKLFDMMHERHVITWNAMID-------------------------- 495
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
G G+ +EA+ +F M+K+ PN+ T ++V+ AC+ G +E G + K
Sbjct: 496 -----GYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKE 550
Query: 122 N-GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
+ G ++ +A++D+ + G L + + E M
Sbjct: 551 DYGLEPSMDHYSAVVDLLGRAGKLHGAWNLIEEM 584
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 178/421 (42%), Positives = 253/421 (60%), Gaps = 5/421 (1%)
Query: 49 LFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
+FS M +R + SW S+I G G+ +A+ + M + G K + T VL ACA +
Sbjct: 599 IFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVA 658
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
LE G VH A +V V +AL+DMY KCG ++ R FE M R + SW+SMI
Sbjct: 659 TLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMIS 718
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
G+A H M + G P++VTF+GVL ACSHVGLVD+G M YG+
Sbjct: 719 GYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLS 778
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG-CRLH-KNIVLAEEAM 285
P +EH+ C+VDLL RAG +++ + I M + PN ++W +LG CR + +N L + A
Sbjct: 779 PRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAA 838
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
+ L +L+ N YV++SN++A G WE+V R M+ VKK GCS + + VH F
Sbjct: 839 KMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLF 898
Query: 346 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALV 405
VAGD+THP+ + I+E ++L+ K++ GY+P+T L DLE ++E+ Y HSEKLA+
Sbjct: 899 VAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSY-HSEKLAIA 957
Query: 406 YGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
+ ++ K + IRIMKNLRVC DCH AFK +S+I R+I++RD NRFH F G C+C DY
Sbjct: 958 F-VLTRKSELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDY 1016
Query: 466 W 466
W
Sbjct: 1017 W 1017
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/438 (23%), Positives = 175/438 (39%), Gaps = 56/438 (12%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA L + I+ N ++ + A +F MP ++ SW S+I GL
Sbjct: 357 GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 416
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
EEA+ F M+++G P+ +V++ L +C+ LG L G+ +H G +V
Sbjct: 417 HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS 476
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX-XXXMIRV 188
V NAL+ +Y + + E +VF M E VSW+S I A + M++
Sbjct: 477 VSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQA 536
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
G +PN VTFI +L A S ++ G + ++ + Y + L+ + ++E+
Sbjct: 537 GWRPNRVTFINILAAVSSFSVLGLGHQIHALILK-YSVADDNAIENALLAFYGKCEQMED 595
Query: 249 AREVIANMSVPPNRVVWGALLGGCR----LHKNIVLAEEAMRHLSKLD------------ 292
+ + MS + V W +++ G LHK + L M+ KLD
Sbjct: 596 CEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACA 655
Query: 293 ---LLNDGYYV-----------------VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
L G V + ++YA+ GK + SR LM R +
Sbjct: 656 SVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSW-- 713
Query: 333 CSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKE 392
+ ++G H + K+ +MK G PD + L
Sbjct: 714 ----------NSMISGYARHGHGQKAL----KIFTRMKQHGQSPDHVTFVGVLSACSHVG 759
Query: 393 IFL--YRHSEKLALVYGL 408
+ Y+H + + VYGL
Sbjct: 760 LVDEGYKHFKSMGEVYGL 777
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 21/306 (6%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I + +G + +AR LF MPQ+N+ SW+ +I G + M +EA +F +
Sbjct: 57 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVI 116
Query: 86 KDGSKPNEVTVVAVLVACAQLGD--LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC-G 142
G PN V + L AC Q G ++ G +H F + ++ + N L+ MY C G
Sbjct: 117 SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSG 176
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM----IRVGMKPNYVTFI 198
+++ +RVF+ ++ R V+W+S+I + M + + ++PN T
Sbjct: 177 SIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLC 236
Query: 199 G-VLHACSHVGLVDKGRALLTIMR---RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
V ACS L D G LL M G + + LV+ +R G ++ A+ +
Sbjct: 237 SLVTAACS---LADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFK 293
Query: 255 NMSVPPNRVVWGALLGGCRLHKNIVLAEEA---MRHLSKLDLLNDGYYVVMSNVYAEAGK 311
M + G ++G R H+ EEA + + L +N VV+ + + E
Sbjct: 294 QMYDRNAVTMNGLMVGLARQHQ----GEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSN 349
Query: 312 WEEVSR 317
+E R
Sbjct: 350 LKEGKR 355
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 12/279 (4%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
RD+ + ++ G + A+ +F M RN + ++ GLA+ EEA KVF EM
Sbjct: 267 RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 326
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGK----SVHRFAKGNGFLR-NVYVCNALIDMYV 139
KD + N ++V +L + +L+ GK VH + +G + + + NAL++MY
Sbjct: 327 -KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYG 385
Query: 140 KCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIG 199
KC ++ VF+ M + VSW+SMI G + M R GM P+ + I
Sbjct: 386 KCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVIS 445
Query: 200 VLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 259
L +CS +G + GR + + +G+ V L+ L + + E ++V M
Sbjct: 446 TLSSCSSLGWLTLGRQIHGEGFK-WGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-E 503
Query: 260 PNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
++V W + +G ++ VL +A+++ L+++ G+
Sbjct: 504 YDQVSWNSFIGALAKYEASVL--QALKYF--LEMMQAGW 538
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF +V+ CN LI++YV+ G L ++F+ M ++ +VSWS +I G+ +
Sbjct: 52 TGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSL 111
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVG 208
+I G+ PN+ L AC G
Sbjct: 112 FKGVISSGLLPNHFAVGSALRACQQCG 138
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 247/444 (55%), Gaps = 32/444 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LYA CG+ R A FD++ +D +WN
Sbjct: 628 LVSLYARCGKVREAYAAFDQIYAKDNVSWN------------------------------ 657
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ G A+ G EEAL +F++M K G + N T + + A A + ++ GK +H +
Sbjct: 658 -SLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRK 716
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G+ V NALI +Y KCG +++ R F M ++ +SW+SMI G++ H
Sbjct: 717 TGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKL 776
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M ++ + PN+VTF+GVL ACSHVGLVD+G + M + +VP EHY C+VDLL
Sbjct: 777 FEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLG 836
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R+G L A+ + M + P+ +VW LL C +HKNI + E A HL +L+ + YV+
Sbjct: 837 RSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVL 896
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+YA +GKW+ R R++MK RGVKK PG S + +D VH F AGD+ HP+A I+E
Sbjct: 897 VSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEY 956
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
L + GY+P + +L D E +QK+ HSE+LA+ +GL++ + + K
Sbjct: 957 LRGLDFRAAENGYVPRCNSLLSDAE-IRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVFK 1015
Query: 422 NLRVCEDCHAAFKLVSEIENREIV 445
NLRVCEDCH K VS+I +R I+
Sbjct: 1016 NLRVCEDCHNWIKHVSKITDRVII 1039
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + +A +F M QR+ S+ S+I GLA+ G AL +F +M D K
Sbjct: 323 NALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQK 382
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ VTV ++L ACA +G L GK H +A G ++ V +L+D+YVKC ++ +
Sbjct: 383 PDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEF 442
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F VV W+ M+VG+ M G+ PN T+ +L C+ +G
Sbjct: 443 FLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGAT 502
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
D G + T + + G V L+D+ ++ G+L+ A ++ + + V W A++
Sbjct: 503 DLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK-ENDVVSWTAMIA 560
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDG 297
G H A + + + +D
Sbjct: 561 GYTQHDKFTEALNLFKEMQDQGIKSDN 587
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 2/241 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G++ +A+ +F ++ R+ SW ++I GL++ G EEA+ +F +M G
Sbjct: 222 NPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGIC 281
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P +VL AC ++ EFGK +H GF YVCNAL+ +Y + G L ++
Sbjct: 282 PTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQI 341
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F M +R VS++S+I G A M KP+ VT +L AC+ VG +
Sbjct: 342 FHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGAL 401
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G+ + + G+ + G L+DL + ++ A E N V+W +L
Sbjct: 402 PNGKQFHSYAIK-AGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACET-ENVVLWNVMLV 459
Query: 271 G 271
G
Sbjct: 460 G 460
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 12/251 (4%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI ++ + + A + F + NV W ++ G + ++ ++F++M+
Sbjct: 419 DIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQ 478
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+G PN+ T ++L C LG + G+ +H GF NVYV + LIDMY K G L+
Sbjct: 479 IEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLD 538
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
++F ++E VVSW++MI G+ H M G+K + + F + AC+
Sbjct: 539 HALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACA 598
Query: 206 HVGLVDKGRAL-----LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+ +D+GR + L+ D I LV L +R G++ EA +
Sbjct: 599 GIQALDQGRQIHAQSCLSGYSDDLSIG------NALVSLYARCGKVREAYAAFDQIYAKD 652
Query: 261 NRVVWGALLGG 271
N V W +L+ G
Sbjct: 653 N-VSWNSLVSG 662
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 157/332 (47%), Gaps = 5/332 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
GE H +++ Q ++ +++I G + A +F + + +V SWT++I G
Sbjct: 505 GEQIHTQVLKTGF-QFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYT 563
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ EAL +F EM+ G K + + + + ACA + L+ G+ +H + +G+ ++
Sbjct: 564 QHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLS 623
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ NAL+ +Y +CG + E Y F+ + + VSW+S++ GFA M + G
Sbjct: 624 IGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAG 683
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
++ N TF + A +++ V G+ + ++R+ G E L+ L ++ G +++A
Sbjct: 684 LEINSFTFGSAVSAAANIANVRIGKQIHGMIRKT-GYDSETEVSNALITLYAKCGTIDDA 742
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAE 308
M N + W +++ G H A + + +LD+L N +V + + +
Sbjct: 743 ERHFFEMP-DKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSH 801
Query: 309 AGKWEE-VSRIRRLMKSRGVKKTPGCSSITID 339
G +E +S R + ++ + P + +D
Sbjct: 802 VGLVDEGISYFRSMSEAHNLVPKPEHYACVVD 833
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 115/274 (41%), Gaps = 40/274 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y + G+ A +FD+MP R ++ WN + I +G LF M +NV
Sbjct: 122 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNV--- 178
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA-QLGDLEFGKSVHRFAK 120
+ +E VL C+ F + +H
Sbjct: 179 ----------------------------EFDERIFAVVLRGCSGNAVSFRFVEQIHAKTI 210
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+GF + ++CN LID+Y K G L +VFE ++ R VSW +MI G + +
Sbjct: 211 TSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAML 270
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGC--LV 237
M G+ P F VL AC+ V + G+ L ++++ + E Y C LV
Sbjct: 271 LFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGF----SSETYVCNALV 326
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L SR+G L A ++ MS +RV + +L+ G
Sbjct: 327 TLYSRSGNLSSAEQIFHCMS-QRDRVSYNSLISG 359
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 230/360 (63%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA G + A ++FD +P RDI +WN MI I G V A +F +MP++NV SW
Sbjct: 152 LLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISW 211
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS+I G + GM +EAL + +M G KP+++T+ L ACA LG LE GK +H +
Sbjct: 212 TSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGK 271
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N + + ALIDMYVKCG +++ VF + ++ V +W+++I GFA+H
Sbjct: 272 NKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDW 331
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + G+KP TF VL ACSH GLV++G++L M Y + P +EHYGC+VDLL
Sbjct: 332 FTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLG 391
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG L+EA+E + +M + PN +WG+LL C LHK++ L +E + L +LD +DG Y+
Sbjct: 392 RAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIH 451
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+++++A AG+W+E S++R +K++G+ PGCS+IT++GV HEF AG E HP + +++M
Sbjct: 452 LASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHPHVREMYDM 511
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 14/281 (4%)
Query: 2 LLHLYASC--GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ---- 55
LL YAS +AR++FD++ + WN MI N A L+ M
Sbjct: 49 LLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIP 108
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
N ++ ++ + E ++ ++ K G ++L A G ++ +
Sbjct: 109 HNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVL 168
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
R++ N +ID Y+KCG +E Y++F+ M E+ V+SW+SMIVGF
Sbjct: 169 FDLLPS----RDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMH 224
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M+ G+KP+ +T L AC+ +G +++G+ + T + ++ + V GC
Sbjct: 225 KEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPV--LGC 282
Query: 236 -LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
L+D+ + G +++A V + + W A++GG +H
Sbjct: 283 ALIDMYVKCGEMKKALLVFSKLE-KKCVYTWTAIIGGFAVH 322
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/383 (42%), Positives = 237/383 (61%), Gaps = 6/383 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA C ARL+FD+MP RD+ + M++ V AAR +FS+M +RNV SW
Sbjct: 294 LVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSW 353
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + G EEA+++F ++++ P T +L ACA L DL+ G+ H
Sbjct: 354 NALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILK 413
Query: 122 NGFL------RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
+GF +++V N+LIDMY+KCG +E+G VFE M ER VSW++MIVG+A +
Sbjct: 414 HGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYG 473
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M+ G +P++VT IGVL ACSH GLV++GR M ++G+VP +HY C
Sbjct: 474 TEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTC 533
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+VDLL RAG L+EA +I M + P+ VVWG+LL C++H NI L + L ++D LN
Sbjct: 534 MVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLN 593
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
G YV++SN+YAE G+W++V R+R+ M+ GV K PGCS I+I +H F+ D+ HP
Sbjct: 594 SGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHK 653
Query: 356 KGIFEMWEKLLVKMKMKGYIPDT 378
K I+ + + L +MK GY+P+
Sbjct: 654 KDIYLILKILTEQMKRVGYVPEA 676
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 157/337 (46%), Gaps = 20/337 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG AR +FD M QR+ +WN ++ L G + A +LF MP+R+ SW
Sbjct: 60 LVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSW 119
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ G A+ EEAL+ +M + NE + + L ACA L DL G +H
Sbjct: 120 NAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAK 179
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ + +VY+ +AL+DMY KC + R F+ M R +VSW+S+I + +
Sbjct: 180 SRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEV 239
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRRD---YGIVPGVEHYGCLV 237
M+ G++P+ +T V AC+ + + +G + +M+ D +V G LV
Sbjct: 240 FVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLG----NALV 295
Query: 238 DLLSRAGRLEEAREVIANMS----VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
D+ ++ R+ EAR V M V +V G ++ + R++ +
Sbjct: 296 DMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNA 355
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
L G Y + G+ EE R+ L+K + T
Sbjct: 356 LIAG--------YTQNGENEEAVRLFLLLKRESIWPT 384
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 318 bits (814), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 156/408 (38%), Positives = 244/408 (59%), Gaps = 1/408 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
++ A +F ++ ++TS+I ++ G EEALK++ +M+ KP+ ++L
Sbjct: 436 SHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLL 495
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L E GK +H A GF+ +++ N+L++MY KCG +E+ R F + +R +V
Sbjct: 496 NACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIV 555
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SWS+MI G A H M++ + PN++T + VL AC+H GLV++G+ M
Sbjct: 556 SWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETM 615
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+GI P EH+ C++DLL R+G+L EA E++ ++ + VWGALLG R+HKN+ L
Sbjct: 616 EEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKNVEL 675
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
E+A L L+ G V+++N+YA AG WE V+ +R++M++ VKK PG S I +
Sbjct: 676 GEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVKKEPGMSWIEVKD 735
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
+H F+ GD H ++ IF ++L + GY P + ++E + +KE LY HSE
Sbjct: 736 RIHTFIVGDRNHSRSDEIFAKLDELSELLSKAGYSPIIETDIHNVERS-EKEKLLYHHSE 794
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRD 448
KLA+ +GLI T PG IR+ KNLRVC DCH KLVS++ +R+IV+ +
Sbjct: 795 KLAVAFGLIVTPPGAPIRVKKNLRVCVDCHTFLKLVSKLVSRQIVIEE 842
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 14/239 (5%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
L S R V SW+++I + G +EAL F+EM G K NE T VL AC+ D
Sbjct: 39 LDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKD 98
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L GK VH +GF + +V N L+ MY KCG + ++F + E VVSW+++
Sbjct: 99 LNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSC 158
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
M+ ++PN + +L+AC+ GL D G I R +G++
Sbjct: 159 HVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACA--GLRDGG-----IGRTVHGLLM 211
Query: 229 GVEH------YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLA 281
+ H LVD+ ++AGR+E+A +V M + P+ V W A++ GC LH+ LA
Sbjct: 212 KLGHGLDQFSANALVDMYAKAGRIEDAVDVFREM-IHPDTVSWNAIIAGCVLHEYNDLA 269
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 36/276 (13%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY+ C AR +D MP +D H+I +
Sbjct: 326 LIDLYSKCEMMDDARRAYDLMPTKD---------HII---------------------AG 355
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G ++CG E+A+ +F E+ + N+ T+ VL + A L ++ K +H +
Sbjct: 356 NALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIK 415
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G + YV N+L+D Y KC ++E ++FE +V+++SMI ++ H
Sbjct: 416 CGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKL 475
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M +KP+ +L+AC+++ ++G+ L + +G + + LV++ +
Sbjct: 476 YLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQ-LHVHAIKFGFMSDIFASNSLVNMYA 534
Query: 242 RAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLH 275
+ G +E+A + + P R V W A++GG H
Sbjct: 535 KCGSIEDADRAFSEI---PQRGIVSWSAMIGGLAQH 567
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D N ++ G ++ LF + + V SW ++ + E + +F
Sbjct: 115 ESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKR 174
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M + +PNE ++ +L ACA L D G++VH G + + NAL+DMY K G
Sbjct: 175 MVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGR 234
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+E+ VF M VSW+++I G +H M + G PN T L A
Sbjct: 235 IEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKA 294
Query: 204 CSHVGLVDKGRALLTI---MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
C+ +GL D GR + + + D + V L+DL S+ +++AR M
Sbjct: 295 CAAMGLKDLGRQIHSCSVKIDSDSDLFVAVG----LIDLYSKCEMMDDARRAYDLMPTKD 350
Query: 261 NRVVWGALLGG 271
+ + AL+ G
Sbjct: 351 HIIAGNALISG 361
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N ++ G + A FS +PQR + SW+++I GLA+ G +EAL +F++M
Sbjct: 522 DIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQML 581
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGK 113
KD PN +T+V+VL AC G + GK
Sbjct: 582 KDCVSPNHITLVSVLCACNHAGLVNEGK 609
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 238/393 (60%), Gaps = 8/393 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++ YA CG AR +FD M QR + +WN ++ + G AAR++F +P RNV SW
Sbjct: 155 LINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSW 214
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G A+ G C EAL +F +M + + ++V +VAVL ACA+LGDL+ G+ +H + +
Sbjct: 215 TTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQE 274
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+V + NAL+ MY CG ++E YR+F M +T VSW+ +I+ FA
Sbjct: 275 RQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEALDL 334
Query: 182 XXXMI-----RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M+ + G++P+ TFI L ACSH G V++G + M + I +EHYGC+
Sbjct: 335 FKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYGCM 394
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL-SKLDLLN 295
VDLLSRAG L+EA +I M PN +WGALLGGCR+HKN LA L ++LD +
Sbjct: 395 VDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELASRVANTLVAELDSTD 454
Query: 296 D--GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
GY V++SN+YA AG+W++V +R+ M GVKK PG S I I GVVH FV GD TH
Sbjct: 455 QAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMGVKKPPGQSWIQIYGVVHNFVVGDMTHK 514
Query: 354 QAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLE 386
+ I+E ++ + +++GY PD + VLLD E
Sbjct: 515 HSSLIYETLCEITEQARVEGYKPDITEVLLDAE 547
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 31/168 (18%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL YA+ G+ +HA +F ++ WN MI R SS + W
Sbjct: 54 LLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMI------------RAYASS-----ITPW 96
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
SV Y +++M + +P+ T +L AC + G + G+ +H
Sbjct: 97 KSVQY--------------YNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLHGIVLA 142
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G+ +V+V LI+ Y CG +E+ VF+ M +R+VVSW+S++VG+
Sbjct: 143 KGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGY 190
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 276/498 (55%), Gaps = 41/498 (8%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGY---------------------- 42
LYA CG+ AR +FD M +++ +WN+MI+ + +G
Sbjct: 207 LYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVT 266
Query: 43 -------------VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS 89
V AR++F + +++ WT++I G A+ G E+AL +FSEM +
Sbjct: 267 VSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALMLFSEMLRGNV 326
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
+P+ T+ V+ +CA+L L G++VH G N+ V +AL+DMY KCG +
Sbjct: 327 RPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMYCKCGVPLDARV 386
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
+FE M + V+ W+SMI+G+A + M++ KP+ ++F+GVL AC + +
Sbjct: 387 IFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFVGVLSACINTNM 446
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
V +GR + + G+ P ++HY C++ LL R+G +++A ++I M P+ +W ALL
Sbjct: 447 VKEGRKHFDSI-SEQGMTPTLDHYACMIILLGRSGNIDKALDLIKGMPHKPDCRIWSALL 505
Query: 270 GGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKK 329
C +I AE A H+ +LD N G Y+++SN+YA G+W++V+ +R LMKS+ KK
Sbjct: 506 SVCS-KGDIKTAEVAANHIFQLDPHNAGSYIMLSNLYAACGRWKDVAVVRSLMKSKNAKK 564
Query: 330 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL-EDA 388
S + I VH FV+ D HP+ + I+ +L+ ++ GY PDT +VL ++ E+
Sbjct: 565 FSAYSWVEIGKKVHRFVSDDHNHPEMEKIYSELNRLIGILQQIGYNPDTGIVLHNVGEEE 624
Query: 389 KQKEIFLYRHSEKLALVYGLINTKPGMS-IRIMKNLRVCEDCHAAFKLVSEIENREIVVR 447
K + I HSEKLAL + LI G + IRI+KN+R+C+DCH K S R I++R
Sbjct: 625 KLRSI--SHHSEKLALAFSLIKKSNGAAPIRIIKNIRICDDCHEFMKFASIAITRPIIIR 682
Query: 448 DRNRFHCFKDGACTCKDY 465
D +RFH F G C+CKD+
Sbjct: 683 DSSRFHHFFGGKCSCKDH 700
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 140/274 (51%), Gaps = 8/274 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLHLYA CG+ A+ +FDKM +RDI +WN +++ VG V +F M R+ S+
Sbjct: 72 LLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSY 131
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I A + +AL+ F M++DG +P + + V L AC+QL D GK +H
Sbjct: 132 NTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRVVV 191
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
F +NV+V NA+ D+Y KCG ++ +F+GM + +VSW+ MI G+
Sbjct: 192 GEFEKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISF 251
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G+KP+ VT VL+A G VD R + + + I + ++ +
Sbjct: 252 FNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEIC-----WTTMIVGYA 306
Query: 242 RAGRLEEAREVIANM---SVPPNRVVWGALLGGC 272
++GR E+A + + M +V P+ ++ C
Sbjct: 307 QSGREEDALMLFSEMLRGNVRPDSHTISTVVSSC 340
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/453 (37%), Positives = 252/453 (55%), Gaps = 54/453 (11%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
AR +FD RD+ +WN MI + G + A++LF M +R+V SW+++I G + G
Sbjct: 4 ARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCF 63
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
E L+ F M + KPNE T+V+ L N + +L
Sbjct: 64 MEDLEFFHNMLQSEVKPNEYTMVSAL----------------------AIKMNDRLLASL 101
Query: 135 IDMYVKCGCLEEGYRVF-EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
IDMY KCG ++ VF E +R V W++MI GFAMH M + PN
Sbjct: 102 IDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVSPN 161
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
VTFI +L+ACSH ++ +G++ +M DYGI P +EHYGC+VDLLSR+ L+EA E+I
Sbjct: 162 KVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEAEEMI 221
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWE 313
+M + P+ +WGALL CR++K++ R + ++D + G V++ N+Y+ +G+W
Sbjct: 222 LSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWN 281
Query: 314 EVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKG 373
E R+++ R + + I+ E+++ K+K+ G
Sbjct: 282 EA----RILRERN---------------------------EIREIYSFLEEMIRKLKIAG 310
Query: 374 YIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAF 433
Y+P+ VLLD +D + KE L HSEKLA+ +GL+NT PG I I+KNLRVC DCH A
Sbjct: 311 YVPELGEVLLDFDDEEDKETTLSVHSEKLAIAFGLMNTAPGTPICIVKNLRVCGDCHEAI 370
Query: 434 KLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
K +S++ +R I+VRDR R+H FKDG C+CKDYW
Sbjct: 371 KFISKVYDRVIIVRDRMRYHHFKDGVCSCKDYW 403
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/426 (38%), Positives = 250/426 (58%), Gaps = 2/426 (0%)
Query: 34 IAHL-INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+AH+ + G + + MP N+ +W +++ G A+ E L + M+ G +P+
Sbjct: 245 LAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPD 304
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
++T V+V+ +C++L L GK +H G V V ++L+ MY KCG L++ + F
Sbjct: 305 KITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFL 364
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
ER VV WSSMI + H + M N VTF+ +L+ACSH GL DK
Sbjct: 365 ECEERDVVIWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDK 424
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
G +M YG+ +EHY C+VDLL R+G LEEA +I +M V + ++W LL C
Sbjct: 425 GLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSAC 484
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
++HKN +A + ++D + YV+++ ++A A +W+ VS +RR MK + VKK PG
Sbjct: 485 KIHKNEEMARRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPG 544
Query: 333 CSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKE 392
S + + VH+F GD++HP+ I + E+L +MKM+GY+PD S VL D+ D ++KE
Sbjct: 545 VSWVEVKNQVHQFHTGDKSHPKFVEINQYLEELTSEMKMQGYVPDISSVLHDM-DNEEKE 603
Query: 393 IFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRF 452
L HSEKLA+ + L+ G IR+MKN+RVC DCH A K +SEI+N EI+VRD +RF
Sbjct: 604 YNLTHHSEKLAIAFALMTIPKGEPIRVMKNMRVCSDCHVAIKYISEIKNLEIIVRDSSRF 663
Query: 453 HCFKDG 458
H FK+G
Sbjct: 664 HHFKNG 669
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 120/215 (55%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+ Y+ GE +A +FD+MP+R+ + NIMI + +G + A++LF M +RNV +W
Sbjct: 113 LLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATW 172
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ GL K G+ EEAL +FS M G P+E + +VL CA L L G+ VH +
Sbjct: 173 NAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVAK 232
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF N V +L MY+K G L G R+ + M +V+W++++ G A +
Sbjct: 233 CGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDH 292
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
M G +P+ +TF+ V+ +CS + + +G+ +
Sbjct: 293 YCMMKMAGYRPDKITFVSVISSCSELATLCQGKQI 327
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 170/419 (40%), Positives = 246/419 (58%), Gaps = 3/419 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F+S+ + +WTS I GL + G E AL +F EM + PN T ++L AC+ L
Sbjct: 260 VFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAM 319
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
LE G+ +H G N YV ALI +Y KCG +E+ VFE + E VVS ++MI
Sbjct: 320 LEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYA 379
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+A + M ++G KPN VTFI +L AC++ GLV++G + +++R ++ I
Sbjct: 380 YAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIEL 439
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
+HY C++DLL RA R EEA +I P+ + W LL C++H + +AE+ M+ +
Sbjct: 440 TRDHYTCMIDLLGRAKRFEEAAMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498
Query: 289 SKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAG 348
+ G +++++N+YA AGKW+ V ++ + +KKTP S + ID VH F+AG
Sbjct: 499 LDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAG 558
Query: 349 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGL 408
D +HP+A I EM +L+ K+ GY PDT VL DLE+ K+ LY HSEKLA+ + L
Sbjct: 559 DLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISA-LYYHSEKLAIAFAL 617
Query: 409 INT-KPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
T +IRI KNLRVC DCH+ K VS + R+I+ RD RFH FK G C+CKDYW
Sbjct: 618 WKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F + ++V +T++I G + G+ EAL+VF +M KPNE T+ +VL
Sbjct: 151 GKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVL 210
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
V+C LGDL GK +H +G V +L+ MY KC +E+ +VF + + V
Sbjct: 211 VSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHV 270
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+S IVG + MIR + PN+ TF +LHACS + +++ G + +
Sbjct: 271 TWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVT 330
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+ G+ L+ L + G +E+AR V +++
Sbjct: 331 VK-LGVDGNKYVDAALIHLYGKCGNVEKARSVFESLT 366
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 119/240 (49%), Gaps = 3/240 (1%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I I + AR LF MP R++ +W S+I G +EA++++ M +G P+
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPD 100
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVF 151
T A+ A +++G G+ H A GF + + +V ++DMY K G +++ VF
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
+ + ++ VV ++++IVG+ M+ +KPN T VL +C ++G +
Sbjct: 161 DRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G+ + ++ + G+ V L+ + S+ +E++ +V +++ + V W + + G
Sbjct: 221 NGKLIHGLVVKS-GLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASH-VTWTSFIVG 278
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 5/135 (3%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V AR +F S+ + +V S ++IY A+ G EAL++F M+K G KPN VT +++L
Sbjct: 353 GNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISIL 412
Query: 101 VACAQLGDLEFGKSVHRFAKGNG---FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+AC G +E G + + N R+ Y C +ID+ + EE + E +
Sbjct: 413 LACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTC--MIDLLGRAKRFEEAAMLIEEGKNP 470
Query: 158 TVVSWSSMIVGFAMH 172
V+ W +++ +H
Sbjct: 471 DVIQWRTLLNACKIH 485
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 249/426 (58%), Gaps = 2/426 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F MPQ+ W ++I G A G EEAL ++ +M G+K + T+ V+
Sbjct: 273 GNIEDARCVFDQMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVI 332
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
CA+L LE GK H GF ++ +AL++ Y K G +E VF+ M + ++
Sbjct: 333 TICARLASLEHGKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNII 392
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW+++I G+ H M++ M PN+VTF+ VL ACS+ GL ++G + M
Sbjct: 393 SWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSM 452
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+D+ I P HY C+++LL R G L+EA +I N PP +W ALL CR+HKN+ L
Sbjct: 453 SQDHNIKPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRMHKNLEL 512
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
+ A L ++ YV++ N+Y +GK +E + + + +K +G++ P + I ++
Sbjct: 513 GKFAAEKLYGMEPEKLCNYVMLLNIYNSSGKLKEAADVLQTLKRKGLRMLPAYTWIEVNK 572
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSE 400
H F+ GD++H Q K I++ + L+V++ GY+ + +L D+++ +Q+ I HSE
Sbjct: 573 QPHAFLCGDKSHKQTKKIYKKVDSLMVEISRHGYVMEKETLLPDVDEEEQRVI--KYHSE 630
Query: 401 KLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGAC 460
KLA+ +G++NT + ++I + RVC DCH A KL++ + REIV+RD +RFH FK+G+C
Sbjct: 631 KLAIAFGIMNTPDWLPLQITQRHRVCGDCHNAIKLITLVTGREIVLRDASRFHRFKNGSC 690
Query: 461 TCKDYW 466
+C +YW
Sbjct: 691 SCGNYW 696
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 7/247 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR F MP+R+ SW ++I GL EA ++F M ++ + T A++ A A+
Sbjct: 177 ARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASAR 236
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L +E G+ +H + +V ALIDMY KCG +E+ VF+ M ++T V W+++
Sbjct: 237 LDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTI 296
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR-ALLTIMRRDY 224
I G+A M G K ++ T V+ C+ + ++ G+ ++RR +
Sbjct: 297 IAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGF 356
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
G + LV+ S+ GR+E AR V M N + W AL+ G H EEA
Sbjct: 357 GT--DLVANSALVNFYSKWGRMENARHVFDKMH-RKNIISWNALIAGYGHHGR---GEEA 410
Query: 285 MRHLSKL 291
+ K+
Sbjct: 411 IEMFEKM 417
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 65 IYGLAKCGMCEEALKVFS--EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
I L C EA+++F E+E S T A++ AC +L + K V + K +
Sbjct: 93 IEKLVLCNKFMEAMELFEMLELENAESYVGASTYDALISACIRLRSIIGVKRVFNYMKNS 152
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
GF ++Y+ N ++ M+V+C + + F+ M ER SW +MI G
Sbjct: 153 GFELDLYMMNRVLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELF 212
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLS 241
M TF ++ A + + ++ GR + T I++R P V+ L+D+ S
Sbjct: 213 LCMWEEFNNGKSRTFAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVD--CALIDMYS 270
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ G +E+AR V M V W ++ G
Sbjct: 271 KCGNIEDARCVFDQMP-QKTTVGWNTIIAG 299
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/381 (39%), Positives = 234/381 (61%), Gaps = 11/381 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L + GE A +F++M +RDI +W+ M+ G + AR LF P +N+ W
Sbjct: 227 MLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLW 286
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G A+ G +EA+ + EMEK G + ++ +++L ACA+ G L GK +H
Sbjct: 287 TTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMH----- 341
Query: 122 NGFLRNVYVC-----NALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXX 175
+ FLR+ + C N+ IDMY KCGC+++ +RVF GM+ E+ +VSW+SMI GF +H
Sbjct: 342 DSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHG 401
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M+R G KP+ TFIG+L AC+H GLV++GR M+R YGIVP +EHYGC
Sbjct: 402 EKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGC 461
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+VDLL R G L+EA ++ +M PN ++ G LLG CR+H ++ LA ++L KL +
Sbjct: 462 MVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSD 521
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
G + ++SN+YA++G W V+++R+ M G +K G SSI ++ VHEF D +HP++
Sbjct: 522 PGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKS 581
Query: 356 KGIFEMWEKLLVKMKMKGYIP 376
I+ M ++L+ ++ GY+P
Sbjct: 582 GDIYNMIDRLVHDLRQVGYVP 602
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 17/284 (5%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFS---EMEKDGS 89
+IA + +A ++F+ +P NV + +I + G +L F +M DG
Sbjct: 60 LIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGV 119
Query: 90 KPNEVTVVAVLVACAQLGD-LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
+ T +L C L K VH + GF +++V N+LID Y +CG +E
Sbjct: 120 LADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAM 179
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
+VF GM ER VVSW+SM+ G + M + + V++ +L + G
Sbjct: 180 KVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMP----ERDRVSWNTMLDGFTKAG 235
Query: 209 LVDKGRALLTIM-RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+DK L M RD + + +V S+ G ++ AR + V N V+W
Sbjct: 236 EMDKAFKLFERMAERD------IVSWSTMVCGYSKNGDMDMARMLFDRCPV-KNLVLWTT 288
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYYVVMSNVYAEAG 310
++ G + A + K L L+DG+++ + AE+G
Sbjct: 289 IISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESG 332
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 36/306 (11%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM- 84
DI N +I G V A +FS M +R+V SW S++ GL K G + ALKVF EM
Sbjct: 158 DIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMP 217
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
E+D V+ +L + G+++ K R A+ R++ + ++ Y K G
Sbjct: 218 ERD-----RVSWNTMLDGFTKAGEMDKAFKLFERMAE-----RDIVSWSTMVCGYSKNGD 267
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
++ +F+ + +V W+++I G+A M + G++ + FI +L A
Sbjct: 268 MDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAA 327
Query: 204 CSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
C+ G++ G+ + + +R + V +D+ ++ G +++A V M +
Sbjct: 328 CAESGMLGLGKKMHDSFLRSRFRCSTKV--LNSFIDMYAKCGCVDDAFRVFNGMKTEKDL 385
Query: 263 VVWGALLGGCRLH----KNIVLAEEAMRHLSKLD---------------LLND--GYYVV 301
V W +++ G +H K+I L +R K D L+N+ GY+
Sbjct: 386 VSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYS 445
Query: 302 MSNVYA 307
M VY
Sbjct: 446 MQRVYG 451
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 232/417 (55%), Gaps = 3/417 (0%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F P+ +V SWTS I G K G E L +F DG K +E V +V+ ACA +
Sbjct: 313 FEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAA 372
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G+ + +A G V N I MY K G ++ F+ + VVSWS MI +
Sbjct: 373 RTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSY 432
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
A H M G+ PN +T +GVL ACSH GLVD+G M++DYG+
Sbjct: 433 AQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAAN 492
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
V+H C+VDLL RAGRLEEA+ I + + V+W ALLG C++HK+ + + +
Sbjct: 493 VKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVI 552
Query: 290 KLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
+L+ YV++ N+Y + GK + +R+LM+ RGVKK PG S I + VH F+ D
Sbjct: 553 ELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDD 612
Query: 350 ETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQK-EIFLYRHSEKLALVYGL 408
+HP ++ I+ +LL K+K + D + + + +Q + + HSEKLA+ +G+
Sbjct: 613 RSHPISELIYSRLGELLAKIKEISF--DNEKLAFYISETEQSGTVRMSHHSEKLAVTFGI 670
Query: 409 INTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
I+ +R+MKNLRVC DCH KL+S++E REI++RD RFH FKDG C+CKDY
Sbjct: 671 ISLPISAPVRVMKNLRVCSDCHTTMKLISKVEKREIILRDAIRFHHFKDGVCSCKDY 727
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 15/275 (5%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+T HA ++ + + + N +I + +R LF + ++ SW S+I A
Sbjct: 60 GQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYA 119
Query: 70 KCGMCEEALKVFS---EMEKDGSKPNEVTVVAVLVACAQLGDLE--FGKSVHRFAKGNGF 124
K G +VF M + G ++ T+ +VL AC D +G+ +H F G
Sbjct: 120 KLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGL 179
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEG--MRERTVVSWSSMIVGFAMH----XXXXXX 178
NV V AL+DMY K GCL + RVFEG ++ + +++MI GF
Sbjct: 180 DFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREA 239
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLV 237
M R+G+K + TF V+ AC G + GR + + ++ + G E LV
Sbjct: 240 VRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNS--LEGDEFVASSLV 297
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
DL S G +++ M+ + V W + + GC
Sbjct: 298 DLYSFFGEIDDGLRCF-EMTPKLDVVSWTSAIAGC 331
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 53 MPQRNVRSWTSVIYGLAKCGMC----EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+ +N + ++I G + G+C EA++VF+EM + G K ++ T +V+ AC GD
Sbjct: 211 LKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGD 270
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
E G+ +H N + +V ++L+D+Y G +++G R FE + VVSW+S I G
Sbjct: 271 FEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAG 330
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ + G K + V+ AC+ + G + + Y +
Sbjct: 331 CVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQI-----QGYALKF 385
Query: 229 GVEHYGCLVD----LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
GV + + + + +++G ++ AR P+ V W ++ H A+E+
Sbjct: 386 GVADFTVVKNTQICMYAKSGDIDSARNTFQETE-KPDVVSWSVMICSYAQHG---FAKES 441
Query: 285 MR 286
+R
Sbjct: 442 LR 443
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N I G + +AR+ F + +V SW+ +I A+ G +E+L++F M G
Sbjct: 395 NTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIV 454
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN-GFLRNVYVCNALIDMYVKCGCLEEGYR 149
PN++T++ VL AC+ G ++ G + K + G NV ++D+ + G LEE R
Sbjct: 455 PNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQR 514
Query: 150 -VFEGMRERTVVSWSSMIVGFAMH 172
+++ E V W +++ +H
Sbjct: 515 FIYDSGFEDDPVLWRALLGACKVH 538
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 232/417 (55%), Gaps = 3/417 (0%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F P+ +V SWTS I G K G E L +F DG K +E V +V+ ACA +
Sbjct: 313 FEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAA 372
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
G+ + +A G V N I MY K G ++ F+ + VVSWS MI +
Sbjct: 373 RTGEQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSY 432
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
A H M G+ PN +T +GVL ACSH GLVD+G M++DYG+
Sbjct: 433 AQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAAN 492
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
V+H C+VDLL RAGRLEEA+ I + + V+W ALLG C++HK+ + + +
Sbjct: 493 VKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVI 552
Query: 290 KLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGD 349
+L+ YV++ N+Y + GK + +R+LM+ RGVKK PG S I + VH F+ D
Sbjct: 553 ELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDD 612
Query: 350 ETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQK-EIFLYRHSEKLALVYGL 408
+HP ++ I+ +LL K+K + D + + + +Q + + HSEKLA+ +G+
Sbjct: 613 RSHPISELIYSRLGELLAKIKEISF--DNEKLAFYISETEQSGTVRMSHHSEKLAVTFGI 670
Query: 409 INTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDY 465
I+ +R+MKNLRVC DCH KL+S++E REI++RD RFH FKDG C+CKDY
Sbjct: 671 ISLPISAPVRVMKNLRVCSDCHTTMKLISKVEKREIILRDAIRFHHFKDGVCSCKDY 727
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 15/275 (5%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+T HA ++ + + + N +I + +R LF + ++ SW S+I A
Sbjct: 60 GQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYA 119
Query: 70 KCGMCEEALKVFS---EMEKDGSKPNEVTVVAVLVACAQLGDLE--FGKSVHRFAKGNGF 124
K G +VF M + G ++ T+ +VL AC D +G+ +H F G
Sbjct: 120 KLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGL 179
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEG--MRERTVVSWSSMIVGFAMH----XXXXXX 178
NV V AL+DMY K GCL + RVFEG ++ + +++MI GF
Sbjct: 180 DFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREA 239
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLV 237
M R+G+K + TF V+ AC G + GR + + ++ + G E LV
Sbjct: 240 VRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNS--LEGDEFVASSLV 297
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
DL S G +++ M+ + V W + + GC
Sbjct: 298 DLYSFFGEIDDGLRCF-EMTPKLDVVSWTSAIAGC 331
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 17/242 (7%)
Query: 53 MPQRNVRSWTSVIYGLAKCGMC----EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+ +N + ++I G + G+C EA++VF+EM + G K ++ T +V+ AC GD
Sbjct: 211 LKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGD 270
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
E G+ +H N + +V ++L+D+Y G +++G R FE + VVSW+S I G
Sbjct: 271 FEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAG 330
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ + G K + V+ AC+ + G + + Y +
Sbjct: 331 CVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQI-----QGYALKF 385
Query: 229 GVEHYGCLVD----LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
GV + + + + +++G ++ AR P+ V W ++ H A+E+
Sbjct: 386 GVADFTVVKNTQICMYAKSGDIDSARNTFQETE-KPDVVSWSVMICSYAQHG---FAKES 441
Query: 285 MR 286
+R
Sbjct: 442 LR 443
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N I G + +AR+ F + +V SW+ +I A+ G +E+L++F M G
Sbjct: 395 NTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIV 454
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN-GFLRNVYVCNALIDMYVKCGCLEEGYR 149
PN++T++ VL AC+ G ++ G + K + G NV ++D+ + G LEE R
Sbjct: 455 PNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQR 514
Query: 150 -VFEGMRERTVVSWSSMIVGFAMH 172
+++ E V W +++ +H
Sbjct: 515 FIYDSGFEDDPVLWRALLGACKVH 538
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 224/377 (59%), Gaps = 1/377 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y C AR +FD+M +D+ +W M+ G + +AR F P++N W
Sbjct: 286 LLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCW 345
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR-FAK 120
+++I G ++ +E+LK+F EM + G P E T+V+VL AC QL L G +H+ F
Sbjct: 346 SAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVV 405
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G +V + NA++DMY KCG ++ VF M ER ++SW++MI G+A +
Sbjct: 406 GKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAIN 465
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M +G +PN +TF+ +L ACSH GL+ +GR M R YGI P HY C+VDLL
Sbjct: 466 VFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLL 525
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
R G LEEA ++IANM + P WGALL CR+H N+ LA + +L +LD + G YV
Sbjct: 526 GRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYV 585
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+++N A KW +V R+R LMK +GVKK PG S I IDG EF+ DE+HPQ++ I++
Sbjct: 586 LLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYK 645
Query: 361 MWEKLLVKMKMKGYIPD 377
+ E++L+ K++ Y D
Sbjct: 646 VLEEILLLSKLEDYSYD 662
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 117/262 (44%), Gaps = 32/262 (12%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F ++V +WT++I G A EEA++VF M +PNEVT++AV+
Sbjct: 193 GLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVV 252
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC----------------- 143
AC+ +G+LE GK VH + ++ + NAL+DMYVKC C
Sbjct: 253 SACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVY 312
Query: 144 --------------LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
LE R F+ + V WS+MI G++ + M+ G
Sbjct: 313 SWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERG 372
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ P T + VL AC + ++ G + I V +VD+ ++ G ++ A
Sbjct: 373 VVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAA 432
Query: 250 REVIANMSVPPNRVVWGALLGG 271
EV + M N + W ++ G
Sbjct: 433 TEVFSTMP-ERNLISWNTMIAG 453
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 144/331 (43%), Gaps = 11/331 (3%)
Query: 3 LHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLI------NVGYVGAARDLFSSMPQR 56
L + SC R + + +M I T ++ +I + G + A +F+ + Q
Sbjct: 48 LLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQP 107
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
N W ++I G A F M + + + + V L AC Q + G+SV+
Sbjct: 108 NTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVY 167
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
GF + V N LI Y + G L+ +VF+ ++ VV+W++MI G+A H
Sbjct: 168 CVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSE 227
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M+ ++PN VT I V+ ACS +G ++ G+ + + + + + + L
Sbjct: 228 EAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV-EEKNMRCSLSLHNAL 286
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
+D+ + L +ARE+ M+ + W +++ G ++ E A R + N
Sbjct: 287 LDMYVKCDCLVDARELFDRMAT-KDVYSWTSMVNGYAKCGDL---ESARRFFDQTPRKNA 342
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
+ M Y++ K +E ++ M RGV
Sbjct: 343 VCWSAMIAGYSQNNKPKESLKLFHEMMERGV 373
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 217/373 (58%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA CG + A+ +FD+M +D+ +W MI N G + A + F+ MP +NV SW
Sbjct: 276 LMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSW 335
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I+ + G+ EA+ +F M G N+ T+VA+L +C+ +GDL GK H +
Sbjct: 336 NSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFD 395
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N + +CNA+IDMY KCG L+ VF GM E+ VSW+ +I A+H
Sbjct: 396 NNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEM 455
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G+ P+ +TF G+L ACSH GLVD G+ IM +GI P VEHY C+VDLL
Sbjct: 456 FEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLG 515
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R G L EA +I M V P+ VVW ALLG CR + N+ + ++ M+ L +L N G YV+
Sbjct: 516 RRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVL 575
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+SN+Y+E+ +W+++ I +++ G+KK S I IDG ++F+ D+ H + I+ M
Sbjct: 576 LSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSM 635
Query: 362 WEKLLVKMKMKGY 374
+L+ +K GY
Sbjct: 636 LGQLMDHLKSAGY 648
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 127/305 (41%), Gaps = 64/305 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L++Y +CG AR +FD + +R + +WN
Sbjct: 175 ILNIYVACGLITSARRVFDDISERTLVSWN------------------------------ 204
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G +K G EEA+ +F EM++ G +P+ T+V +L + G+ + G+ VH
Sbjct: 205 -SMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVV 263
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX------ 175
G + V NAL+DMY KCG L+ VF+ M ++ VVSW+ MI +A H
Sbjct: 264 TGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEF 323
Query: 176 -------------------------XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
M G+ N T + +L +CSH+G +
Sbjct: 324 FNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDL 383
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G+ + + D I ++D+ ++ G L+ A +V M N V W ++G
Sbjct: 384 ALGKQAHSYI-FDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMP-EKNAVSWNVIIG 441
Query: 271 GCRLH 275
LH
Sbjct: 442 ALALH 446
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 14/303 (4%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
HA+++ + + + T +++ + + + A LF +PQ N + +I G +
Sbjct: 56 HAQIILHGLATQ-VLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSD 114
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
++L ++ M DG PN+ T+ VL ACA G VH + G + V NA
Sbjct: 115 PIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNA 174
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
++++YV CG + RVF+ + ERT+VSW+SMI G++ M VG++P+
Sbjct: 175 ILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPD 234
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH----YGCLVDLLSRAGRLEEA 249
T +G+L + G D GR + M +V G+E L+D+ ++ G L+ A
Sbjct: 235 VFTLVGLLSVSTKHGNFDLGRFVHLHM-----VVTGIEIDSIVTNALMDMYAKCGNLKCA 289
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV---VMSNVY 306
+ V M + + V W ++ H I A E + ++++ + V +Y
Sbjct: 290 KSVFDQM-LDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLY 348
Query: 307 AEA 309
AEA
Sbjct: 349 AEA 351
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 232/379 (61%), Gaps = 4/379 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CGE AR++FD M Q+ + +W M+ G++ AR++ +P+++V W
Sbjct: 300 LMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPW 359
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + +EAL +F EM+ +P++VT+V L AC+QLG L+ G +H + +
Sbjct: 360 NAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER 419
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ +V + AL+DMY KCG + +VFE + +R ++W+++I G A+H
Sbjct: 420 HKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSY 479
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
MI +G+ P+ +TF+GVL AC H GLV++GR + M + + P ++HY C+VDLL
Sbjct: 480 FSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLG 539
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG LEEA E++ NM + + V GAL CR++ N+ + E L ++D + G YV+
Sbjct: 540 RAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVL 599
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE- 360
++++Y+EA W+E R+LM +GV+KTPGCS + I+G+VHEFV D +HPQ++ I+E
Sbjct: 600 LASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYEC 659
Query: 361 ---MWEKLLVKMKMKGYIP 376
+ ++L V ++ GY P
Sbjct: 660 LVTLTKQLDVIVRKHGYFP 678
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 149/300 (49%), Gaps = 42/300 (14%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DI N I L++ G + A D+F+ R++ +W S+I G K G+ EA+K++ EME
Sbjct: 192 DIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEME 251
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ +PNE+T++ ++ +C+Q+ DL GK H + K +G + + NAL+DMYVKCG L
Sbjct: 252 AEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELL 311
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFA--------------------------------MHX 173
+F+ M ++T+VSW++M++G+A
Sbjct: 312 TARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQ 371
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
IR ++P+ VT + L ACS +G +D G + + R + + V
Sbjct: 372 GKEALALFHEMQIRT-IEPDKVTMVNCLSACSQLGALDVGIWIHHYIER-HKLSIDVALG 429
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
LVD+ ++ G + A +V + P R + W A++ G LH N A++A+ + SK+
Sbjct: 430 TALVDMYAKCGNIARALQVFEEI---PQRNCLTWTAVICGLALHGN---AQDALSYFSKM 483
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGK 113
+ NV SW + I G + G E ++ M G+ KP+ T +L C G
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
V GF +++V NA I M + CG L Y VF R R +V+W+SMI G
Sbjct: 179 GVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRG 238
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
M ++PN +T IG++ +CS V ++ G+ + +++G+ +
Sbjct: 239 LAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYI-KEHGLEFTIPLT 297
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+D+ + G L AR + NM+ V W ++ G
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMA-QKTLVSWTTMVLG 334
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 228/382 (59%), Gaps = 1/382 (0%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+L+ Y AR +FDKMP RD +WN M+ G V +F MP+RNV S
Sbjct: 212 VLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFS 271
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
W +I G K G+ E L+ F M +G PN+ T+VAVL AC++LG L+ GK VH +A
Sbjct: 272 WNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYA 331
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ G+ N++V N LIDMY KCG +E VF + + ++SW+++I G A+H
Sbjct: 332 ESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDAL 391
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M G +P+ VTF+G+L AC+H+GLV G M Y IVP +EHYGC+VDL
Sbjct: 392 GMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDL 451
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAG L++A I M + P+ V+W ALLG CRL+KN+ +AE A++ L +L+ N +
Sbjct: 452 LGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLIELEPNNPANF 511
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V++SN+Y + G+ E+V+R++ M+ G +K PGCS I + V EF + DE H + + I+
Sbjct: 512 VMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHSETESIY 571
Query: 360 EMWEKLLVKMKMKGYIPDTSVV 381
+ + L + ++ GY+P+ S V
Sbjct: 572 RVLKGLTMLLRSHGYVPNLSDV 593
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 72/126 (57%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR LF +PQ N +W ++ G + G + + +F E+ + PN T ++ +C +
Sbjct: 63 ARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGK 122
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L + G+ VH A +GF N +V +LIDMY K GC+E+ Y+VF M ER VV W+++
Sbjct: 123 LEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAI 182
Query: 166 IVGFAM 171
I G+ +
Sbjct: 183 INGYIL 188
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/415 (38%), Positives = 231/415 (55%), Gaps = 34/415 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ-RNVRS 60
L+ Y+S G AR +FD+M RD+ W MI+ + V +A LF MP+ +N +
Sbjct: 119 LVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEMPEGKNTAT 178
Query: 61 WTSVIYGLAKCGMCE-------------------------------EALKVFSEMEKDGS 89
W +VI G AK G E E +K+F EM +G
Sbjct: 179 WNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGK 238
Query: 90 K-PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
P+EV + V+ ACA LG L FGK VH + +GF +VY+ ++LIDMY KCG LE
Sbjct: 239 VVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSL 298
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
VF ++E+ + W+SMI G A H M R G++PN VTF+ VL AC+H G
Sbjct: 299 LVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAG 358
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
+ +GR T M DY I P VEHYGC+VDLLS+ G LE+A E+I M PN +WGAL
Sbjct: 359 FIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGAL 418
Query: 269 LGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV- 327
L GC++H+N+ +A +R+L L+ N G+Y ++ N+YAE +W +V++IR MK GV
Sbjct: 419 LNGCKVHRNLEIARVTVRNLMILEPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVE 478
Query: 328 KKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
K+ PG S I I+ +H F A D+ HP + + +L ++++ G++P+ VL
Sbjct: 479 KRCPGSSWIEINKEIHVFAASDKCHPSYGQVHLLLVELDEQLRLAGFVPEMGSVL 533
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ A F+ + + N + ++I +AL + M + P+ + +++ A
Sbjct: 28 INFAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKA 87
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C L D GK++H GF +V+V L++ Y G + + +VF+ M R V +W
Sbjct: 88 CTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAW 147
Query: 163 SSMIVGF 169
++MI +
Sbjct: 148 TTMISAY 154
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/479 (36%), Positives = 256/479 (53%), Gaps = 58/479 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLF--------SSM 53
L+ +Y+ G+ A+++FD M +R+ +W + L G G + D F ++
Sbjct: 241 LIDMYSKSGDVDTAQVVFDSMSKRNAISWTSL---LTGYGMHGCSEDAFRVFDEMRKEAL 297
Query: 54 PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEF 111
N SW + G A AL++FSEM K + PN+ T+ VL++CA+L L+F
Sbjct: 298 SFGNGGSWNRFVXGDAN-----HALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKF 352
Query: 112 GKSVH----RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
GK +H R + N + ++V N LIDMY K G ++ VF+ M +R VSW+S++
Sbjct: 353 GKQIHAHVLRRSHSNSDV--LFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLT 410
Query: 168 GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV 227
G+ MH M + + + +TF+ VL+AC
Sbjct: 411 GYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYAC----------------------- 447
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
+HY C+VDLL RAGRL EA +I +M + P VVW ALL CR+H N LAE A +
Sbjct: 448 ---KHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKK 504
Query: 288 LSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVA 347
L +L NDG Y ++SN+YA A +W++V+RI LMK G+KK PG S + + F
Sbjct: 505 LLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYV 564
Query: 348 GDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYG 407
GD TH Q++ I+E L+ ++K + D D ++K L HSEKLAL Y
Sbjct: 565 GDRTHLQSQKIYETLADLIKRIKANFSLHDV--------DDEEKGDQLSEHSEKLALAYA 616
Query: 408 LINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
++ PG IRI KNLR+C D H+A +S I EI++RD +RFH FK+G+C+CK YW
Sbjct: 617 ILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 675
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 146/288 (50%), Gaps = 20/288 (6%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAK 70
A ++++M +D+ TWN M+ G A LF M + +V +W+SVI G A+
Sbjct: 4 ASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISGYAQ 63
Query: 71 CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-----KG--NG 123
G EA+ VF +M +PN V ++++L ACA +G L GK H ++ KG N
Sbjct: 64 RGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKGEHND 123
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMHXXXXXXXXX 181
++ V NALIDMY KC LE +F+ + ++R VV+W+ MI G+A +
Sbjct: 124 DNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQL 183
Query: 182 XXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVD 238
M + + PN T VL +C+ + + G+ + ++RR + CL+D
Sbjct: 184 FSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLID 243
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
+ S++G ++ A+ V +MS N + W +LL G +H +E+A R
Sbjct: 244 MYSKSGDVDTAQVVFDSMS-KRNAISWTSLLTGYGMHG---CSEDAFR 287
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 223/353 (63%), Gaps = 5/353 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ L+ + G +++AR +FD+M RD+ +WN M+ + G V A +LF M RN+ +W
Sbjct: 170 LISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITW 229
Query: 62 TSVIYGLAKCGMCEEALKVFSEME----KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
S+I GL + G +E+L++F EM+ D KP+++T+ +VL ACA LG ++ GK VH
Sbjct: 230 NSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHA 289
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ + N +V + AL++MY KCG +++ +F M E+ +W++MI FA+H
Sbjct: 290 YLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKK 349
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M + G+KPN+VTF+G+L ACSH GLV++GR +M+R Y I P + HY C+V
Sbjct: 350 AFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMV 409
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
D+LSRA +EA +I +M + P+ VWGALLGGC++H NI L E+ +L L+ N
Sbjct: 410 DILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHA 469
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK-KTPGCSSITIDGVVHEFVAGD 349
+Y+ + ++Y +AGK++ RIR MK RG++ K PGCS I I+GVV EF G+
Sbjct: 470 FYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEFSVGE 522
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 121/279 (43%), Gaps = 44/279 (15%)
Query: 39 NVGYVGAARDLFSSMPQRNVRSWTSVI--YGLAKCG----MCEEALKVFSEMEKDGSKPN 92
N A ++F + +R + +I YG + G C +AL ++ +M G PN
Sbjct: 68 NYASFNYANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPN 127
Query: 93 EVTVVAVLVACAQLG-DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF 151
+T ++ C++L G+ +H GFL +V+V N+LI +++ G + +VF
Sbjct: 128 NLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVF 187
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM---------------IRVG------- 189
+ M R VVSW+SM+VG+ + M ++ G
Sbjct: 188 DEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLE 247
Query: 190 -------------MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
+KP+ +T VL AC+ +G +D G+ + +R++ I V L
Sbjct: 248 IFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKN-DIECDVVIGTAL 306
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
V++ + G +++A E+ +M + W A++ LH
Sbjct: 307 VNMYGKCGDVQQAIEIFNDMP-EKDASAWTAMISVFALH 344
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 214/361 (59%), Gaps = 1/361 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y C AR +FD+M +D+ +W M+ G + +AR F P++N W
Sbjct: 236 LLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCW 295
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR-FAK 120
+++I G ++ +E+LK+F EM + G P E T+V+VL AC QL L G +H+ F
Sbjct: 296 SAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVV 355
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G +V + NA++DMY KCG ++ VF M ER ++SW++MI G+A +
Sbjct: 356 GKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAIN 415
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M +G +PN +TF+ +L ACSH GL+ +GR M R YGI P HY C+VDLL
Sbjct: 416 VFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLL 475
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
R G LEEA ++IANM + P WGALL CR+H N+ LA + +L +LD + G YV
Sbjct: 476 GRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYV 535
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+++N A KW +V R+R LMK +GVKK PG S I IDG EF+ DE+HPQ++ I++
Sbjct: 536 LLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYK 595
Query: 361 M 361
+
Sbjct: 596 L 596
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 120/272 (44%), Gaps = 32/272 (11%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I G + AR +F ++V +WT++I G A EEA++VF M +
Sbjct: 133 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 192
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC------- 143
PNEVT++AV+ AC+ +G+LE GK VH + ++ + NAL+DMYVKC C
Sbjct: 193 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 252
Query: 144 ------------------------LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
LE R F+ + V WS+MI G++ +
Sbjct: 253 FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESL 312
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+ G+ P T + VL AC + ++ G + I V +VD+
Sbjct: 313 KLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDM 372
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ G ++ A EV + M N + W ++ G
Sbjct: 373 YAKCGSIDAATEVFSTMP-ERNLISWNTMIAG 403
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 11/326 (3%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLI------NVGYVGAARDLFSSMPQRNVRSW 61
SC R + + +M I T ++ +I + G + A +F+ + Q N W
Sbjct: 3 SCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMW 62
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G A F M + + + + V L AC Q + G+SV+
Sbjct: 63 NTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWK 122
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF + V N LI Y + G L+ +VF+ ++ VV+W++MI G+A H
Sbjct: 123 MGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEV 182
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ ++PN VT I V+ ACS +G ++ G+ + + + + + + L+D+
Sbjct: 183 FELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV-EEKNMRCSLSLHNALLDMYV 241
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
+ L +ARE+ M+ + W +++ G ++ E A R + N +
Sbjct: 242 KCDCLVDARELFDRMAT-KDVYSWTSMVNGYAKCGDL---ESARRFFDQTPRKNAVCWSA 297
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGV 327
M Y++ K +E ++ M RGV
Sbjct: 298 MIAGYSQNNKPKESLKLFHEMMERGV 323
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 170/429 (39%), Positives = 242/429 (56%), Gaps = 19/429 (4%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLV 101
V A+ +F M RNV SWTS+I ++ G AL++F E +KPN + + +
Sbjct: 175 VDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVT 234
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
ACA LG L GK H G + V +AL+DMY KCGC+ +VF + +VV
Sbjct: 235 ACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRIVNPSVVP 294
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
++SMIVG A + M+ +KPN +TF+GVLH L M
Sbjct: 295 YTSMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVLH-------------LFNSMN 341
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV--PPNRVVWGALLGGCRLHKNIV 279
YG++P HY C+VD+L R GR++EA ++ ++ V + ++WG LL RLH +
Sbjct: 342 EKYGVMPDARHYTCIVDMLGRVGRIDEAYQLAQSVQVGSEDDALLWGTLLSASRLHGRVD 401
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
+A EA + + + YV +SN YA AG WE +R MK GV K PG S I I
Sbjct: 402 IAIEASNRVIESNQQVAAAYVTLSNTYALAGDWENAHNLRSEMKRTGVYKEPGSSWIEIK 461
Query: 340 GVVHEFVAGDETH-PQAKGIFEMWEKLLVKMKMKGYIP-DTSVVLLDLEDAKQKEIFLYR 397
+ F AGD + Q + + + +L +MK +G++ T +V +D+E+ ++EI +
Sbjct: 462 DSTYLFHAGDLSKCSQKRELLSLLRELEGRMKERGHVGVTTGLVFVDVEEEAKEEI-VSL 520
Query: 398 HSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKD 457
HSEKLAL +GL+NT G++I IMKNLR+C DCH AFKL+S+I RE VVRD NRFH FK+
Sbjct: 521 HSEKLALAFGLLNTPKGITIIIMKNLRMCRDCHEAFKLISDIVEREFVVRDVNRFHHFKN 580
Query: 458 GACTCKDYW 466
G+CTC D+W
Sbjct: 581 GSCTCGDFW 589
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 118/247 (47%), Gaps = 17/247 (6%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
D T N +I + + + A LF M NV SW+ ++ G + G AL +F +
Sbjct: 55 SNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCLFHQ 114
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M+ PNE T ++ AC+ L +LE G+ +H + G+ ++ VC++LIDMY KC
Sbjct: 115 MQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNR 174
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM-KPNYVTFIGVLH 202
++E +F+ M R VVSW+SMI ++ + + M KPN+ +
Sbjct: 175 VDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVT 234
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEH------YGCLVDLLSRAGRLEEAREV---I 253
AC+ +G + G+ +G+V + H LVD+ ++ G + + +V I
Sbjct: 235 ACASLGRLGSGKI-------THGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRI 287
Query: 254 ANMSVPP 260
N SV P
Sbjct: 288 VNPSVVP 294
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 86/186 (46%), Gaps = 2/186 (1%)
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+G + + N LI+ Y+K ++ +++F+ M VVSWS ++ G+
Sbjct: 52 SGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCL 111
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + PN TF +++ACS + ++ GR + ++ +G + L+D+
Sbjct: 112 FHQMQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEV-FGYRSDLVVCSSLIDMYG 170
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
+ R++EA+ + M V N V W +++ + LA + R + + + ++++
Sbjct: 171 KCNRVDEAQMIFDFMWV-RNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFML 229
Query: 302 MSNVYA 307
S V A
Sbjct: 230 CSAVTA 235
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 231/410 (56%), Gaps = 34/410 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA C AR MFD++ +D R+V +W
Sbjct: 134 LIDMYAKCKSLEVARAMFDEICPKD-----------------------------RDVVTW 164
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
T +I G A+ G AL++FSEM K + PN+ T+ VL+ACA+L L FGK +H +
Sbjct: 165 TVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYV 224
Query: 120 KGNGFLRN--VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ + ++V N LIDMY K G ++ VF+ M +R +SW+S++ G+ MH
Sbjct: 225 LRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSED 284
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M + + + +TF+ VL+ACSH G+VD+G L M +D+ + PGVEHY C+
Sbjct: 285 AFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMA 344
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DL RAGRL EA +I +MS+ P VVW ALL CR H N+ LAE A + L +L NDG
Sbjct: 345 DLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNVELAEFAAKKLLELKADNDG 404
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
Y ++SN+YA A +W++V+RIR LMK G+KK PG S + + F GD TH Q++
Sbjct: 405 TYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSQK 464
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYG 407
I+E L+ ++K GY+P T+ L D++D ++ + L HSEKLAL Y
Sbjct: 465 IYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLL-EHSEKLALAYA 513
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 146/293 (49%), Gaps = 20/293 (6%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----NVRSWTSVIYGLAK 70
A ++++M +D+ TWN M+ G A LF M + +V +W+SVI G A+
Sbjct: 4 ASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQ 63
Query: 71 CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-----KG--NG 123
G EA+ VF +M +PN VT++++L CA +G L GK H ++ KG N
Sbjct: 64 RGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHND 123
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMHXXXXXXXXX 181
++ NALIDMY KC LE +F+ + ++R VV+W+ MI G+A +
Sbjct: 124 DNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQL 183
Query: 182 XXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLVD 238
M + + PN T VL AC+ + + G+ + + R I V CL+D
Sbjct: 184 FSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLID 243
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
+ S++G ++ A+ V +MS N + W +LL G +H +E+A R ++
Sbjct: 244 MYSKSGDVDTAQVVFDSMS-KRNAISWTSLLTGYGMHG---CSEDAFRVFDEM 292
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 225/396 (56%), Gaps = 13/396 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y CGE + +F M ++D +W M+ + A +F+ MP + SW
Sbjct: 186 LIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSW 245
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAK 120
++I G K G C EAL+VF +M K+G P T V+VL ACA + GK VH + +
Sbjct: 246 AALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIR 305
Query: 121 G--NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-RERTVVSWSSMIVGFAMHXXXXX 177
G + L NVYV NAL+DMY KCG ++ +FE M + VVSW+++I GFA +
Sbjct: 306 GRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGED 365
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
MI ++PN+VTF+GVL AC+H GLV+ G LL M R YG+ P HY L+
Sbjct: 366 SLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLI 425
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRV-----VWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
DLL R RLEEA +I + PN + +WGA+LGGCR+H N+ LA +A L L+
Sbjct: 426 DLLGRKNRLEEAMCLIEKV---PNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALE 482
Query: 293 LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETH 352
N G YV++SN+YA +G+W + +RIR +MK RG+KK P S I + HEFVA D+ H
Sbjct: 483 PENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFH 542
Query: 353 PQAKGIFEMWEKLLVKMKMKGYIPDTSV-VLLDLED 387
PQ I E KL+ M GY P S LLD +D
Sbjct: 543 PQIGEIREANSKLVQHMMDVGYQPCISYPSLLDEDD 578
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 140/305 (45%), Gaps = 35/305 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY+ CG FD +P + TWN +++ G A LF MPQRN+ S+
Sbjct: 52 LIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSY 111
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEK--DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
S+I GL + +EA+K F EM+ G +E T+V+++ C+ L +++ + VH A
Sbjct: 112 NSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVA 171
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV------------ 167
GF N+ + NALID Y KCG + +F M E+ VSW+SM+V
Sbjct: 172 TIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDAC 231
Query: 168 -------------------GFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
GF + MI+ G+ P TF+ VL AC+
Sbjct: 232 KVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEA 291
Query: 209 LVDKGRAL-LTIMR-RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG 266
L+ +G+ + I+R R + V + L+D+ ++ G ++ A + M + V W
Sbjct: 292 LIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWN 351
Query: 267 ALLGG 271
L+ G
Sbjct: 352 TLITG 356
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 231/407 (56%), Gaps = 4/407 (0%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKP-NEVTVVAVLVACAQLGDLEFGKSVHRFA 119
WTS++ G A+ G EA +F + +EV + ++L C +G + GK +H
Sbjct: 468 WTSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQV 527
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
GF NV V N +++MY KCG +++ ++F GM +VSW+++I G+ H
Sbjct: 528 LKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLTHRQGDRAL 587
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHAC--SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M G+KP+ +TF+ ++ A + + LVD R L M+ Y I P +HY +
Sbjct: 588 EIWLKMQEEGIKPDDITFVLIISAYRQTSLNLVDDCRILFNSMKTVYHIEPTSQHYSSFI 647
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
+L G LEEA E I MS P+ VW ALL GCRLHKN ++ + A +++ L+ +
Sbjct: 648 SVLGHWGLLEEALETINKMSFKPSAFVWRALLDGCRLHKNTMIGKLAAKNILALEPNDPS 707
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
Y+++SN+++ +G+W+ R R M+ +G +K P S I +H F A D +H Q K
Sbjct: 708 TYILVSNLHSSSGRWDCSERTRENMREKGFRKHPAQSWIICRKKMHSFYARDRSHQQDKD 767
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSI 417
I+ E L+++ GY P+TS VL ++E+ QK+ FL+ HS KLA YGL+ TKPG I
Sbjct: 768 IYRGLEILILECLKVGYEPETSFVLHEVEE-HQKKKFLFNHSSKLAAAYGLLMTKPGKPI 826
Query: 418 RIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKD 464
RI+KN+ +C DCH K S + R+I +RD + FHCF DG C+CKD
Sbjct: 827 RIVKNILLCGDCHTFLKCASFVTKRDIFLRDSSGFHCFSDGQCSCKD 873
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 139/281 (49%), Gaps = 11/281 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y + G+ +F++M RD+ TW M+ + G+V +F MP++N ++
Sbjct: 308 LIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNCVTY 367
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++ GL + +A+++F M ++G + + ++ + + AC+ L D + +H FA
Sbjct: 368 NVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQMHGFAIK 427
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF NV+V AL+DMY +CG + + +++E + E + V W+SM+ G+A +
Sbjct: 428 FGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARN----GQPRE 483
Query: 182 XXXMIRVGMKP-----NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
+ +G + V +L C VG D G+ + + + +G V+ +
Sbjct: 484 AFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLK-FGFHSNVQVGNVV 542
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
V++ + G +++A ++ + M+ + V W L+ G H+
Sbjct: 543 VEMYFKCGNVDDAIKMFSGMA-STDIVSWNTLISGYLTHRQ 582
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-KP 91
+I+ IN+ A LF S N+ S++++I +K +++L +F M S +P
Sbjct: 104 LISTYINLRLFSYAHRLFLSQSPPNIVSYSALISAFSKSNREKQSLFLFLHMITVSSLRP 163
Query: 92 NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF 151
N T VAVL AC ++ +L+FG +H G+L++V+V NAL+ Y KCG + ++VF
Sbjct: 164 NHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVF 223
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHACSHVGLV 210
+ M ER + SW++++ M+ + G+K +Y T L AC+ GL+
Sbjct: 224 DEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLL 283
Query: 211 DKGRAL 216
+G+ +
Sbjct: 284 MEGKQV 289
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
+ + N ++ G+ A +F MP+R++ SW +V+ + M ++ ++F +M
Sbjct: 198 KSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDM 257
Query: 85 EK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
DG K + T+ L ACA G L GK VH A G + V NALI Y G
Sbjct: 258 LVIDGLKVDYFTLSTFLTACAASGLLMEGKQVHAHAVKVGLEDELNVGNALIGFYTNFGD 317
Query: 144 LEEGYRVFEGMRERTVVSWSSMI 166
+++ +FE M R V++W+ M+
Sbjct: 318 IDDVVCLFERMSVRDVITWTEMV 340
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/410 (38%), Positives = 231/410 (56%), Gaps = 34/410 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA C AR MFD++ +D R+V +W
Sbjct: 191 LIDMYAKCKSLEVARAMFDEICPKD-----------------------------RDVVTW 221
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
T +I G A+ G AL++FSEM K + PN+ T+ VL+ACA+L L FGK +H +
Sbjct: 222 TVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYV 281
Query: 120 KGNGFLRN--VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ + ++V N LIDMY K G ++ VF+ M +R +SW+S++ G+ MH
Sbjct: 282 LRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSED 341
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M + + + +TF+ VL+ACSH G+VD+G L M +D+ + PGVEHY C+
Sbjct: 342 AFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMA 401
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DL RAGRL EA +I +MS+ P VVW ALL CR H N+ LAE A + L +L NDG
Sbjct: 402 DLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNVELAEFAAKKLLELKADNDG 461
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
Y ++SN+YA A +W++V+RIR LMK G+KK PG S + + F GD TH Q++
Sbjct: 462 TYTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSQK 521
Query: 358 IFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYG 407
I+E L+ ++K GY+P T+ L D++D ++ + L HSEKLAL Y
Sbjct: 522 IYETLADLIQRIKAIGYVPQTNFALHDVDDEEKGDQLL-EHSEKLALAYA 570
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 154/306 (50%), Gaps = 20/306 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----N 57
L+ +YA CG+ A ++++M +D+ TWN M+ G A LF M + +
Sbjct: 48 LVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELD 107
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V +W+SVI G A+ G EA+ VF +M +PN VT++++L CA +G L GK H
Sbjct: 108 VVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHC 167
Query: 118 FA-----KG--NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVG 168
++ KG N ++ NALIDMY KC LE +F+ + ++R VV+W+ MI G
Sbjct: 168 YSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGG 227
Query: 169 FAMHXXXXXXXXXXXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
+A + M + + PN T VL AC+ + + G+ + + R I
Sbjct: 228 YAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRI 287
Query: 227 VPGVEHYG-CLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
V CL+D+ S++G ++ A+ V +MS N + W +LL G +H +E+A
Sbjct: 288 DSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLLTGYGMHG---CSEDAF 343
Query: 286 RHLSKL 291
R ++
Sbjct: 344 RVFDEM 349
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 50/210 (23%)
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMR--------------------------------- 155
+V NAL+DMY KCG +E+ +V+E MR
Sbjct: 43 FVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREE 102
Query: 156 --ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
E VV+WSS+I G+A M +PN VT + +L C+ VG + G
Sbjct: 103 RIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHG 162
Query: 214 R-----ALLTIMR----RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR-- 262
+ ++ I++ D + G+ L+D+ ++ LE AR + + P +R
Sbjct: 163 KETHCYSIKFILKGEHNDDNDDLAGIN---ALIDMYAKCKSLEVARAMFDEI-CPKDRDV 218
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
V W ++GG + + A + + K D
Sbjct: 219 VTWTVMIGGYAQYGDANHALQLFSEMFKFD 248
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 239/419 (57%), Gaps = 17/419 (4%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F+S+ + +WTS I GL + G E AL +F EM + PN T+ ++L AC+ L
Sbjct: 260 VFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAM 319
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
LE G+ +H G N +V ALI +Y KCG +E+ VF+ + E +VS ++MI
Sbjct: 320 LEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYA 379
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+A + + ++G++PN VTFI +L AC++ GLV++G + +++R ++ I
Sbjct: 380 YAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIEL 439
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
+HY C++DLL RA R EEA +I P+ + W LL C++H + +AE+ M+ +
Sbjct: 440 TRDHYTCMIDLLGRAKRFEEATMLIEE-GKNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498
Query: 289 SKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAG 348
+ G +++++N+YA AGKW+ V ++ + +KKTP S + ID VH F+AG
Sbjct: 499 LDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAG 558
Query: 349 DETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGL 408
D +HP+A I EM +L+ K+ GY PDT VL DLE+ K+ LY HSEKLA+ + L
Sbjct: 559 DLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQDLEEEKKISA-LYYHSEKLAIAFAL 617
Query: 409 INT-KPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
T +IRI KNLRVC D I+ RD RFH FK G C+CKDYW
Sbjct: 618 WKTCGKNTAIRIFKNLRVCGDY--------------IIARDAKRFHHFKGGICSCKDYW 662
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 111/217 (51%), Gaps = 1/217 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F + ++V +T++I G + G+ EAL+VF +M KPNE T+ +VL
Sbjct: 151 GKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVL 210
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
V+C LGDL GK +H G V +L+ MY KC +E+ +VF + + V
Sbjct: 211 VSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHV 270
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+S IVG + M+R + PN+ T +LHACS + +++ G + +
Sbjct: 271 TWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVT 330
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+ G+ L+ L + G +E+AR V +++
Sbjct: 331 VK-LGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLT 366
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 122/240 (50%), Gaps = 3/240 (1%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I I + AR LF MP R++ +W S+I G +EA++++S M +G P+
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPD 100
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVF 151
T A+ A +++G G+ H A GF + + +V ++DMY K G +++ VF
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 152 EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
+ + ++ VV ++++IVG+ H M+ +KPN T VL +C ++G +
Sbjct: 161 DRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G+ + ++ + YG+ V L+ + S+ +E++ +V +++ + V W + + G
Sbjct: 221 NGKLIHGLVVK-YGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASH-VTWTSFIVG 278
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 36/174 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+HLY CG AR +FD + + DI + N M
Sbjct: 345 LIHLYGKCGNVEKARSVFDSLTELDIVSINTM---------------------------- 376
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
IY A+ G EAL++F ++K G +PN VT +++L+AC G +E G + +
Sbjct: 377 ---IYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRN 433
Query: 122 NG---FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
N R+ Y C +ID+ + EE + E + V+ W +++ +H
Sbjct: 434 NHSIELTRDHYTC--MIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIH 485
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 232/431 (53%), Gaps = 10/431 (2%)
Query: 41 GYVGAARDLF-SSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G++ LF + + ++ SWT++I A+ E+A +F ++ ++ + T
Sbjct: 349 GHISDCFKLFLDTSGEHDIVSWTAIISVFAERDP-EQAFLLFCQLHRENFVLDRHTFSIA 407
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + VH GF + V NALI Y + G L +VF M +
Sbjct: 408 LKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDL 467
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
VSW+SM+ +A+H M + P+ TF+ +L ACSH GLV++G +
Sbjct: 468 VSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNS 524
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M +GI P ++HY C+VDL RAG++ EA E+I M + P+ V+W +LLG CR H
Sbjct: 525 MTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEAD 584
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
LA+ A LD N Y+ MSN+Y+ G + E IR+ M+ V+K PG S + +
Sbjct: 585 LAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVG 644
Query: 340 GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHS 399
VHEF +G + HP+ + I E L+ ++K GY P+ L D+E + E L+ HS
Sbjct: 645 KQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHDIE-VEHIEDQLFHHS 703
Query: 400 EKLALVYGLINTK----PGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCF 455
EK+ALV+ ++N G I+IMKN+R+C DCH KL S++ +EIVVRD NRFH F
Sbjct: 704 EKMALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHF 763
Query: 456 KDGACTCKDYW 466
K C+C DYW
Sbjct: 764 KYATCSCNDYW 774
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 146/343 (42%), Gaps = 48/343 (13%)
Query: 5 LYASCGETRHAR-------LMFDKMP--QRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
L+ +C + ++ + + +K P Q DI N ++ G++ AR LF MP+
Sbjct: 84 LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
RN SWT ++ G A+ G+ E +FS M +PNE +VL AC + D+++G V
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCACEE-QDVKYGLQV 201
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCG---------CLEEGYRVFEGMRERTVVSWSSMI 166
H A +VYV NALI MY KC ++ + VF+ M R ++SW+SMI
Sbjct: 202 HAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMI 261
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD---------KGRALL 217
GF M G++ N T +GVL + +H K L
Sbjct: 262 SGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQL 321
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSR-AGRLEEAREVIANMSVPPNRVVWGALLG------ 270
+ G++ VE LV + G + + ++ + S + V W A++
Sbjct: 322 HCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERD 381
Query: 271 -------GCRLHK-NIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
C+LH+ N VL RH + L Y+V N
Sbjct: 382 PEQAFLLFCQLHRENFVLD----RHTFSIALKACAYFVTEKNA 420
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 224/369 (60%), Gaps = 12/369 (3%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G R A +FD+M +R+I + ++++ + VG V +F M R+V +W +VI G
Sbjct: 150 GGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCT 209
Query: 70 KCGMCEEALKVFSEMEK----------DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+ G E +++F EM G+KPN+VTVV VL AC G L+ GK +H +
Sbjct: 210 QNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYV 269
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+GF+ + +V NAL+DMY KCG LE +VFE + + + SW+SMI +A+H
Sbjct: 270 YRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAI 329
Query: 180 XXXXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ G ++P+ VTFIG+L+AC+H GLV++G +M ++YGI P + HYGCL+
Sbjct: 330 TFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLI 389
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DLL RAG+ +EA +V+ MS+ P+ VVWG+LL GC++H LAE A + L ++D N G
Sbjct: 390 DLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGG 449
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
Y +++N+Y + GKW+E+ + +K + K PGCS I +D VH+F + D+++P+ +
Sbjct: 450 YGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNPKTEE 509
Query: 358 IFEMWEKLL 366
++ + E L
Sbjct: 510 LYNILESLF 518
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 207/336 (61%), Gaps = 1/336 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y++CG+ A +FD+M R++ WNIMI +G + LF M QR+V SW
Sbjct: 149 LLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSW 208
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I LA+ EA +F EM + G +P++ T+V VL CA+LGD++ G+ +H +A G
Sbjct: 209 NLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADG 268
Query: 122 NGFLRNVY-VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G LR V V N+L+D Y KCG LE ++VF M ++ VVSW++MI G ++
Sbjct: 269 KGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVE 328
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R G+ P+ TF+GVL C+H G VDKGR + M + + P +EHYGC+VDLL
Sbjct: 329 LFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLL 388
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
R G ++EA ++I NM + PN +WGALL CR H + +AE A + L +L+ N G YV
Sbjct: 389 GRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYV 448
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
++SNVYAE KW EV ++R LM+ G+KK PG S++
Sbjct: 449 LLSNVYAEERKWNEVEKVRVLMQGVGIKKNPGQSAL 484
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 146/365 (40%), Gaps = 43/365 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRN 57
+LHL + H + + + N +++H ++V + A +F+ N
Sbjct: 12 ILHLLHNTKTQTHLPQIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPN 71
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVH 116
+ + S+I + ++ F+ M+ + P+ T +L A + L D + G+ +H
Sbjct: 72 ILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLH 131
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF------- 169
GF R+ V L+++Y CG +E+ +VF+ M R VV W+ MI GF
Sbjct: 132 AHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLE 191
Query: 170 ------------------------AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
A M+ G +P+ T + VL C+
Sbjct: 192 IGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCA 251
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYG-CLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
+G VD G + + G++ V G LVD + G LE A +V M+ N V
Sbjct: 252 RLGDVDAGEWIHSYADGK-GLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMT-KKNVVS 309
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
W A++ G L+ L E +++ + +D +V + A AG V + R +
Sbjct: 310 WNAMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGF---VDKGREIFD 366
Query: 324 SRGVK 328
S VK
Sbjct: 367 SMTVK 371
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 207/338 (61%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y AR +FD+M R++ +WN MI G + AAR LF MP R+V SW
Sbjct: 218 LIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISW 277
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
TS+I ++ G +A+++F EM KP+E+TV +VL ACA +G L+ G++VH + +
Sbjct: 278 TSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRK 337
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
++YV NALIDMY KCG +E+G VFE M +R VSW+S+I G A++
Sbjct: 338 YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNL 397
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+R G++P + TF+GVL AC+H G+VDKG M R YG+ P ++HYGC+VDLLS
Sbjct: 398 FSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLS 457
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R+G L A E I M + P+ VVW LL ++H N+ LAE A + L + D N G Y++
Sbjct: 458 RSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYIL 517
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
SN YA + +WE+V ++RRLM+ V K SS+ I+
Sbjct: 518 SSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 555
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 137/298 (45%), Gaps = 41/298 (13%)
Query: 8 SCGETRHARLM---FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSV 64
SC T HAR++ FD D+ N +I +G AR +F M +R++ SW S+
Sbjct: 94 SC-TTVHARVLKLGFDS----DLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSL 148
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
I G +C E L VF EM K + VT+V V++AC LG+ ++ + + N
Sbjct: 149 ICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKV 208
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG---------------- 168
+VY+ N LIDMY + ++ RVF+ MR+R +VSW++MI+G
Sbjct: 209 EVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDD 268
Query: 169 ---------------FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
++ M+ +KP+ +T VL AC+H+G +D G
Sbjct: 269 MPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVG 328
Query: 214 RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
A+ +R+ Y + + L+D+ + G +E+ V M + V W +++ G
Sbjct: 329 EAVHEYIRK-YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMG-KRDSVSWTSVIAG 384
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 147/309 (47%), Gaps = 10/309 (3%)
Query: 22 MPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVF 81
+P I+ +N++ ++ ++ + A +LF +P+ + W +I G ++ EA++ +
Sbjct: 6 LPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNY 65
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+ M N +T +L ACA++ ++ +VH GF +++V NALI Y
Sbjct: 66 NLMYSQALFGNNLTYPFLLKACARISNVSC-TTVHARVLKLGFDSDLFVSNALIHGY--A 122
Query: 142 GCLEEGY--RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIG 199
G E G+ +VF+ M ER +VSW+S+I G+ M +K + VT +
Sbjct: 123 GFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVK 182
Query: 200 VLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 259
V+ AC+ +G A++ + + + V L+D+ R ++ AR V M
Sbjct: 183 VVLACTVLGEWGVVDAMIEYIEEN-KVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMR-D 240
Query: 260 PNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIR 319
N V W A++ G N+V A + + D+++ + M + Y++AG++ + R+
Sbjct: 241 RNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVIS---WTSMISSYSQAGQFGKAVRLF 297
Query: 320 RLMKSRGVK 328
+ M VK
Sbjct: 298 QEMMVTKVK 306
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 221/379 (58%), Gaps = 4/379 (1%)
Query: 2 LLHLYASCGE-TRHARLMFDKMPQR---DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L+H Y + + +A+ +F++ D+ TWN M+A L+ G V A +F MP+R+
Sbjct: 151 LIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRD 210
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V SW+S+I G + G E+ L+ F M + G +PNE +V +L A AQLG L +G+ VH
Sbjct: 211 VVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHS 270
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ F +V + L+DMY KCGC+EE +F+GM ER + +W+ MI G A H
Sbjct: 271 TIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKE 330
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
IR G +P V F+GVL+ACS GLV +GR +M YGI P +EHYGC+V
Sbjct: 331 ALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMV 390
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DL +RAG ++EA +I M+V P+ V+W LL C +H + + E+ L K+D +DG
Sbjct: 391 DLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNKLIKMDPTHDG 450
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
+YV ++ +YA++ KW++V R+RRLM R K G S I ++ VH FVAGD H +
Sbjct: 451 HYVQLAGIYAKSRKWDDVVRVRRLMVERVPIKVAGWSLIEVEDRVHRFVAGDRDHDHSSD 510
Query: 358 IFEMWEKLLVKMKMKGYIP 376
I++M E + + + G P
Sbjct: 511 IYKMLEIIGLMVSEAGCSP 529
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 209/346 (60%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D + + ++ GY A +F MP R+V +WT V+ G +C ++AL F M
Sbjct: 242 DGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRML 301
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
D PNE T+ +VL ACA +G L+ G+ VHR+ + N N + +L+DMY KCGC++
Sbjct: 302 LDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVD 361
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ VFE ++ + V +W++MI G A+H M+ G++PN VTF+GVL ACS
Sbjct: 362 KALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACS 421
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H G VD+G+ L +MR Y + P +EHYGC+VDLL RAG LE+A+++I NM + P+ V
Sbjct: 422 HGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVL 481
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
GALLG C HK+ V+ E L L ++ Y +++N+Y+ WE V+R+R+LMK
Sbjct: 482 GALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGT 541
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 371
V+KTPG S I + G +HEF A D +H + ++ M E L+++MKM
Sbjct: 542 QVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQMKM 587
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 150/314 (47%), Gaps = 16/314 (5%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
+L FD D N I+ G++ A +F P+R++ +WT++I G K G+
Sbjct: 134 KLGFD----HDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPG 189
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF--AKGNGFLRNVYVCNA 133
EAL+ F EM G + TV +VL A A +GD FGK VH F G L C A
Sbjct: 190 EALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYC-A 248
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L+DMY KCG E+ +VF+ M R VV+W+ ++ GF M+ + PN
Sbjct: 249 LVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPN 308
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
T VL AC+HVG +D+GR + M + V G LVD+ ++ G +++A
Sbjct: 309 EFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTS----LVDMYAKCGCVDKAL 364
Query: 251 EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYYVVMSNVYAEA 309
V N+ V N W A++ G +H + + A + + L ND ++ + +
Sbjct: 365 MVFENLQV-KNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHG 423
Query: 310 GKWEEVSRIRRLMK 323
G +E ++ +M+
Sbjct: 424 GFVDEGKKLFEMMR 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 21/251 (8%)
Query: 32 IMIAHLINVG-----YVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
I +A LI + R L +++ N R + +I K L +++M +
Sbjct: 43 IFVAKLIQCAPLSQPQTSSLRLLLNTIHTPNTRLFNKLITSFPK-----TTLLSYAKMHE 97
Query: 87 DGSKPNEVTVVAVLVACAQLG----DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
G +P++ T +L ++ G L F F G F + +VCN I + G
Sbjct: 98 MGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLG--FDHDCFVCNGFISAFGCSG 155
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
++ +VF+ ER +V+W+++I GF + M G+ + T VL
Sbjct: 156 FMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLR 215
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
A + VG G+ + +V Y LVD+ + G E+A +V M P R
Sbjct: 216 AAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEM---PYR 272
Query: 263 --VVWGALLGG 271
V W ++ G
Sbjct: 273 DVVAWTVVVAG 283
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 209/346 (60%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D + + ++ GY A +F MP R+V +WT V+ G +C ++AL F M
Sbjct: 242 DGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRML 301
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
D PNE T+ +VL ACA +G L+ G+ VHR+ + N N + +L+DMY KCGC++
Sbjct: 302 LDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVD 361
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ VFE ++ + V +W++MI G A+H M+ G++PN VTF+GVL ACS
Sbjct: 362 KALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACS 421
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H G VD+G+ L +MR Y + P +EHYGC+VDLL RAG LE+A+++I NM + P+ V
Sbjct: 422 HGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMKPSPGVL 481
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
GALLG C HK+ V+ E L L ++ Y +++N+Y+ WE V+R+R+LMK
Sbjct: 482 GALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVRKLMKGT 541
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKM 371
V+KTPG S I + G +HEF A D +H + ++ M E L+++MKM
Sbjct: 542 QVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQMKM 587
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/314 (30%), Positives = 150/314 (47%), Gaps = 16/314 (5%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
+L FD D N I+ G++ A +F P+R++ +WT++I G K G+
Sbjct: 134 KLGFD----HDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPG 189
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF--AKGNGFLRNVYVCNA 133
EAL+ F EM G + TV +VL A A +GD FGK VH F G L C A
Sbjct: 190 EALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYC-A 248
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L+DMY KCG E+ +VF+ M R VV+W+ ++ GF M+ + PN
Sbjct: 249 LVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPN 308
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
T VL AC+HVG +D+GR + M + V G LVD+ ++ G +++A
Sbjct: 309 EFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTS----LVDMYAKCGCVDKAL 364
Query: 251 EVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYYVVMSNVYAEA 309
V N+ V N W A++ G +H + + A + + L ND ++ + +
Sbjct: 365 MVFENLQV-KNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHG 423
Query: 310 GKWEEVSRIRRLMK 323
G +E ++ +M+
Sbjct: 424 GFVDEGKKLFEMMR 437
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 21/251 (8%)
Query: 32 IMIAHLINVG-----YVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
I +A LI + R L +++ N R + +I K L +++M +
Sbjct: 43 IFVAKLIQCAPLSQPQTSSLRLLLNTIHTPNTRLFNKLITSFPK-----TTLLSYAKMHE 97
Query: 87 DGSKPNEVTVVAVLVACAQLG----DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
G +P++ T +L ++ G L F F G F + +VCN I + G
Sbjct: 98 MGVQPDKHTFPLLLKIFSKNGVPNDHLPFMVYAQVFKLG--FDHDCFVCNGFISAFGCSG 155
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
++ +VF+ ER +V+W+++I GF + M G+ + T VL
Sbjct: 156 FMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLR 215
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
A + VG G+ + +V Y LVD+ + G E+A +V M P R
Sbjct: 216 AAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEM---PYR 272
Query: 263 --VVWGALLGG 271
V W ++ G
Sbjct: 273 DVVAWTVVVAG 283
>Medtr6g460480.1 | organelle transcript processing protein, putative
| HC | chr6:20783537-20781756 | 20130731
Length = 439
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 227/399 (56%), Gaps = 49/399 (12%)
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
K G EAL +F +M + KPNE T+ G +H + + N
Sbjct: 88 KVGCFMEALDLFHKMLQSEVKPNEYTM---------------GNWIHVYIRRGEIKMNDR 132
Query: 130 VCNALIDMYVKCGCLEEGYRVF-EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV 188
+ +LIDMY KCG +E VF E +R V W++MI GFAMH
Sbjct: 133 LLASLIDMYAKCGEIESASSVFCEHKVKRKVWPWNAMIGGFAMHG--------------- 177
Query: 189 GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEE 248
KP G++ +M DYGI P +EHYGC+VDLLSR+G L++
Sbjct: 178 --KPEEAI---------------NGKSYFELMGSDYGINPEIEHYGCMVDLLSRSGLLKD 220
Query: 249 AREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAE 308
A E+I +M + P+ +WGALL CR++K++ R + ++D + G V++ N+Y+
Sbjct: 221 AEEMILSMPMAPDVAIWGALLNACRIYKDMERRYRIGRIIKEIDPNHIGCNVLLGNIYST 280
Query: 309 AGKWEEVSRIRRLMK-SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLV 367
+ +W E +R + + KK PG SSI ++G+ H+F+ GD +HP++K I+ ++++
Sbjct: 281 SERWNEARMLREKNEINSDRKKIPGFSSIELNGIFHQFLVGDRSHPKSKEIYSFLDEMIS 340
Query: 368 KMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCE 427
K+K+ GY+P+ VLLD +D + KE L HSEKLA+ +GL+NT PG I I+KNLRVC
Sbjct: 341 KLKIAGYVPELGEVLLDFDDEEDKETALSVHSEKLAIAFGLMNTAPGTPICIVKNLRVCA 400
Query: 428 DCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
DCH A K +S++ +R I+VRDR R+H FK+G C+CKDYW
Sbjct: 401 DCHHATKFISKVYDRVIIVRDRMRYHHFKNGVCSCKDYW 439
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/374 (39%), Positives = 225/374 (60%), Gaps = 5/374 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN--VR 59
L+ +Y SC + AR +FD+ N MI + VG V AR LF SM +R+ V
Sbjct: 153 LIQMY-SCYDVCSARKLFDEFGGNG-CVLNAMIVAYVKVGDVSNARKLFDSMLERDKDVF 210
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SWT++I G + EA+K+F M+ + KP+E+ ++AVL ACA LG L G+ +H +
Sbjct: 211 SWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYI 270
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ + + V + N+LIDMY K G + + +FE M+ +T+++W++MI G A+H
Sbjct: 271 EKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEAL 330
Query: 180 XXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M + +KPN VTFI +L ACSHVGLV+ GR T MR YGI P +EHYGC++D
Sbjct: 331 RVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMID 390
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
LL RAG L+EA+E++ M N +WG+LL + LAEEA+RHL+ L+ + G
Sbjct: 391 LLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGN 450
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
Y ++SN YA G+W E +R++M+ GV+K PG S I ++ +V+EF+AGD+ I
Sbjct: 451 YSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAGDKLSIYFVDI 510
Query: 359 FEMWEKLLVKMKMK 372
+++ L ++K++
Sbjct: 511 YDVLHSLDGQIKIE 524
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 211/337 (62%), Gaps = 4/337 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L+HLYA G T AR +F+ + DI +W+ ++ G + AR +F MP+R+
Sbjct: 146 LIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERD 205
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V SWT ++ +K E L +F EM G P+EVTV++V+ ACA+LGD E G+ VH+
Sbjct: 206 VVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHK 265
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
F + NGF V +CN+LIDMY KCGCLEE ++VF+ + +++++W++M++ A H
Sbjct: 266 FVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAED 325
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
MI G+ P+ VT + +L A +H G VD+G L M+RDYG+ P +EHYG +V
Sbjct: 326 AFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVV 385
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
D+L R+GRL+EA ++ +M +P N V+WGALLG CR+H ++ + E ++ L +L G
Sbjct: 386 DMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELKPDEGG 445
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
YY+++ ++Y AG+ E + +R+ M + G +K PGCS
Sbjct: 446 YYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCS 482
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 211/337 (62%), Gaps = 4/337 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
L+HLYA G T AR +F+ + DI +W+ ++ G + AR +F MP+R+
Sbjct: 146 LIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERD 205
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V SWT ++ +K E L +F EM G P+EVTV++V+ ACA+LGD E G+ VH+
Sbjct: 206 VVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHK 265
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
F + NGF V +CN+LIDMY KCGCLEE ++VF+ + +++++W++M++ A H
Sbjct: 266 FVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAED 325
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
MI G+ P+ VT + +L A +H G VD+G L M+RDYG+ P +EHYG +V
Sbjct: 326 AFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVV 385
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
D+L R+GRL+EA ++ +M +P N V+WGALLG CR+H ++ + E ++ L +L G
Sbjct: 386 DMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELKPDEGG 445
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
YY+++ ++Y AG+ E + +R+ M + G +K PGCS
Sbjct: 446 YYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCS 482
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/369 (37%), Positives = 215/369 (58%), Gaps = 4/369 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+ Y++ GE R AR++FD+ ++D+ W MI +G V +AR++F MP+RNV SW
Sbjct: 156 FIEFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSW 215
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++++ ++ E L +F EM+ +G +PN+ +V VL ACA LG L G VH +A+
Sbjct: 216 SAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARR 275
Query: 122 -NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ N + AL+DMY KCGC+E VF+G+ ++ V +W++MI G A++
Sbjct: 276 FDRVSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVALNGDARKSLE 335
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
MI G KPN TF+ VL AC+H +V +G L M YG+ P EHY C+VDLL
Sbjct: 336 LFQQMIVCGNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLL 395
Query: 241 SRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
SR+G +EEA I + VWGA+L CR++KNI + + L + + + G
Sbjct: 396 SRSGMVEEAERFIEEKMGGFAAGDANVWGAILNACRIYKNINVGNRVWKKLIDMGVADCG 455
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
+V+ N+Y EAG E +R+R ++ G+KK PGCS I + V EF+AGD++HPQA+
Sbjct: 456 THVLTYNIYREAGWDAEANRVRSMISEAGMKKKPGCSIIEVGNEVEEFLAGDQSHPQAQE 515
Query: 358 IFEMWEKLL 366
+ + + +L
Sbjct: 516 MCRLLDSIL 524
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 216/365 (59%), Gaps = 5/365 (1%)
Query: 2 LLHLYASCGETRHARLMFD----KMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN 57
++++YA+ G AR +FD ++ D+ N MI G + +R+LF M R
Sbjct: 168 IIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRT 227
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
SW S+I G + G EAL++F++M+ +G + +E T+V++L ACA LG L+ GK VH
Sbjct: 228 SVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHD 287
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ K N F NV V A+IDMY KCG +E VFE R + W+S+I+G AM+
Sbjct: 288 YIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHERE 347
Query: 178 XXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
+ + KP+ V+FIGVL AC H+G ++K R +M Y I P ++HY C+
Sbjct: 348 AFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCI 407
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
VD+L +AG LEEA E+I M + P+ ++WG+LL CR H+N+ +A A + + +L+ +
Sbjct: 408 VDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDA 467
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
YV+MSNV+A + K+EE R LMK +K PGCSSI + G VHEF+AG HP+ +
Sbjct: 468 SGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQ 527
Query: 357 GIFEM 361
I+ +
Sbjct: 528 EIYHL 532
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A LF MP N+ SW ++I ++ + A+ +F +M +P +T +V
Sbjct: 75 GNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVF 134
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG------- 153
A AQLG +G +H G + ++CN +I MY G + E RVF+G
Sbjct: 135 KAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYD 194
Query: 154 ----------------------------MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
M RT VSW+SMI G+ + M
Sbjct: 195 HDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKM 254
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
G + + T + +L+AC+H+G + G+ + ++R++ + V ++D+ + G
Sbjct: 255 QVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFEL-NVIVVTAIIDMYCKCGS 313
Query: 246 LEEAREVIANMSVPPNRVV--WGALLGGCRLHKNIVLAEEAMRHLSKLD 292
+E A EV P R + W +++ G ++ + EA SKL+
Sbjct: 314 VENAVEVFETC---PRRGLSCWNSIIIGLAMNGH---EREAFEFFSKLE 356
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 239/441 (54%), Gaps = 15/441 (3%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
DIA N ++ VG + A + +M R+ ++T + L + G ALKV M
Sbjct: 454 DIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMC 513
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
DG K +E ++ + L A A LG +E GK +H ++ +GF R V N+L+ +Y KCG +
Sbjct: 514 NDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIH 573
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ R F+ + E SW+ +I GF+ + M G+KP+ +T + ++ ACS
Sbjct: 574 DANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACS 633
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GL++ G M+++Y I P ++HY CLVDLL R GRLEEA VI MS P+ ++
Sbjct: 634 HGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLIC 693
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
LL C LH N+ L E+ R +LD + Y++++N+Y AG + + RRLM+ R
Sbjct: 694 KTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRER 753
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
G++++PG + I VH F AG++ + I E E L+ + + + Y
Sbjct: 754 GLRRSPGQCWMEIRSRVHHFSAGEKINEDE--ITEKLEFLITEFRNRRY---------QY 802
Query: 386 EDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIV 445
++ + K + H E+LA+ +G++N IRI KN +C CH L +++ REI+
Sbjct: 803 QENEDK----FYHPEQLAVAFGVLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREII 858
Query: 446 VRDRNRFHCFKDGACTCKDYW 466
+RDR RFH FKDG C+C+D +
Sbjct: 859 MRDRKRFHFFKDGQCSCRDIF 879
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 130/277 (46%), Gaps = 4/277 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
Q D+ N +++ V AR LF MP R+V SWT+++ K +AL++F
Sbjct: 46 QHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDM 105
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G PNE T+ + L +C LG+ E G +H A G N +V +L++ Y KCGC
Sbjct: 106 MIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGC 165
Query: 144 LE-EGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
E +++ +++ VVSW++M+ + MI G+ PN TF+ +L
Sbjct: 166 CSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLL 225
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
A S + G+ LL +G + +VD+ S+ R+ +A +V +N++ +
Sbjct: 226 GAVSSFLGLSYGK-LLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKV-SNLTPEYD 283
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+W L+ G + + A R + LL + +
Sbjct: 284 VYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNF 320
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 54 PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
P+ +V WT++I G + EA+ VF +ME G PN T ++L A + + L+ G+
Sbjct: 280 PEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGE 339
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCL-EEGYRVFEGMRERTVVSWSSMIVGFAMH 172
H G ++Y+ NAL+DMY+KC + +VF + V+ W+S+I GFA
Sbjct: 340 QFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFA-E 398
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP---- 228
M G++PN T +L ACS K R+L+ M I+
Sbjct: 399 KRLEDSFQLFAEMQAAGVRPNSFTMSAILGACS------KTRSLVPTMMLHGHIIKTKVD 452
Query: 229 -GVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
+ LVD + G ++EA VI M++
Sbjct: 453 IDIAVANALVDTYAGVGMIDEAWSVIGTMNL 483
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
+V SWT+++ L + G EA +++ +M + G PNE T V +L A + L +GK +H
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLH 241
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
G N+ + A++DMY KC + + +V E V W+++I GF +
Sbjct: 242 AHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVR 301
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY--- 233
M G+ PN T+ +L+A S + +D G + + I+ G+E
Sbjct: 302 EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRV-----IIVGLEDDLYI 356
Query: 234 -GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LVD+ + + + PN + W +L+ G
Sbjct: 357 GNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAG 395
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/376 (37%), Positives = 210/376 (55%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G A +F +MP ++ +WN MI+ G + A ++F +M RNV SW S+I
Sbjct: 369 YCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLI 428
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G + G+ +ALK M ++G KP++ T L +CA L L+ GK +H +G++
Sbjct: 429 TGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYI 488
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
+++V NALI MY KCG ++ +VF+ + ++SW+S+I G+A++ M
Sbjct: 489 NDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQM 548
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
G P+ VTFIG+L ACSH GL ++G L M + I P EHY CLVDLL R GR
Sbjct: 549 SSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGR 608
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
LEEA ++ M V N +WG+LL CR+HKN+ L + A L +L+ N Y+ +SN+
Sbjct: 609 LEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNM 668
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
+AEAG+WE+V R+R LM+ R K PGCS I + + FV+ D + + I + L
Sbjct: 669 HAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTL 728
Query: 366 LVKMKMKGYIPDTSVV 381
M+ K I D V
Sbjct: 729 SAHMRDKCNISDMKSV 744
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 48/304 (15%)
Query: 9 CGETRH-----ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTS 63
CG RH AR +FD+MP +++ +WN MIA + + A LF P ++ SWT+
Sbjct: 243 CGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTT 302
Query: 64 VIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
+I G + G +EA +V+++M KD + A++ Q G ++ V F++ N
Sbjct: 303 MINGYVRVGKLDEAREVYNQMPYKDVAAK-----TALMSGLIQNGRIDEASQV--FSQLN 355
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA------------ 170
R+ N++I Y + G + E +F M + VSW++MI G+A
Sbjct: 356 K--RDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIF 413
Query: 171 -------------------MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD 211
+ M + G KP+ TF L +C+++ +
Sbjct: 414 EAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQ 473
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G+ L ++ + G + + L+ + ++ G ++ A +V ++ + + W +L+ G
Sbjct: 474 VGKQLHELILKS-GYINDLFVSNALIAMYAKCGGVQSAEKVFKDIE-GVDLISWNSLISG 531
Query: 272 CRLH 275
L+
Sbjct: 532 YALN 535
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 181/429 (42%), Gaps = 64/429 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ ++A G AR +FDKM QR++ +WN MIA ++ V A LF M +R+ SW
Sbjct: 54 MVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSW 113
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I + GM E+A ++F E+ D K + A++ A+ G + + V F K
Sbjct: 114 ALMITCYTRKGMLEKARELF-ELVPD--KLDTACWNAMIAGYAKKGRFDDAEKV--FEKM 168
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
++++ N+++ Y + G + + FE M ER VVSW+ M+ GF +
Sbjct: 169 P--VKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWEL 226
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR---------------RDYGI 226
+ PN V+++ +L + G + + R L M +D I
Sbjct: 227 FEKIP----DPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQI 282
Query: 227 VPGVE-----------HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG--ALLGGCR 273
V+ + +++ R G+L+EAREV M P + V AL+ G
Sbjct: 283 DEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM---PYKDVAAKTALMSGLI 339
Query: 274 LHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGC 333
+ I A + L+K D + + M Y ++G+ E + R M P
Sbjct: 340 QNGRIDEASQVFSQLNKRDAI---CWNSMIAGYCQSGRMSEALNLFRQM--------PVK 388
Query: 334 SSITIDGVVHEFVAGDETHPQAKGIFEM--------WEKLLVKMKMKGYIPDT--SVVLL 383
++++ + ++ + E +A IFE W L+ G D S+VL+
Sbjct: 389 NAVSWNTMISGYAQAGEMD-RATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLM 447
Query: 384 DLEDAKQKE 392
E K +
Sbjct: 448 GQEGKKPDQ 456
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 25/338 (7%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ A+ +F + ++ AT+N M+ G V AR LF M QRN+ SW ++I G
Sbjct: 31 GKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYL 90
Query: 70 KCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVAC-AQLGDLEFGKSVHRFAKGNGFLRN 127
M EEA K+F M E+D A+++ C + G LE + + +
Sbjct: 91 HNNMVEEAHKLFDLMAERDNFS------WALMITCYTRKGMLEKARELFELVPDK---LD 141
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
NA+I Y K G ++ +VFE M + +VS++SM+ G+ + M
Sbjct: 142 TACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAE 201
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
+ + G ++ C D G A + P + ++ +R G++
Sbjct: 202 RNVVSWNLMVAGFVNNC------DLGSAWELFEKIPD---PNAVSWVTMLCGFARHGKIV 252
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYA 307
EAR++ M N V W A++ I +EA++ + + + M N Y
Sbjct: 253 EARKLFDRMPC-KNVVSWNAMIAAYVQDLQI---DEAVKLFKETPYKDCVSWTTMINGYV 308
Query: 308 EAGKWEEVSRIRRLMKSRGV-KKTPGCSSITIDGVVHE 344
GK +E + M + V KT S + +G + E
Sbjct: 309 RVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDE 346
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 136/336 (40%), Positives = 210/336 (62%), Gaps = 1/336 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA G+ + AR +F++MP+RD+ +WN+MI + G + +AR LF P ++V SW
Sbjct: 180 LIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSW 239
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH-RFAK 120
++I G CG+ ++AL++F+EM + G P+EVT++++L ACA LGDLE GK VH + +
Sbjct: 240 NAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVME 299
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ + + NALIDMY KCG ++E VF + ++ V+SW+S+IVG A+H
Sbjct: 300 ISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLS 359
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M R + PN +TF+GVL ACSH G +D+G +M +Y I P + H GC+VD+L
Sbjct: 360 LFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDML 419
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
RAG L+EA + I +M + PN ++W LL C++H ++ LA+ A L + + G YV
Sbjct: 420 GRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYV 479
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+MSN+YA G+W+ ++R+LM GV K G S +
Sbjct: 480 LMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFV 515
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A LF+ +PQ + + +I G ++ A+ +++EM + K + T VL AC +
Sbjct: 61 AHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTR 120
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L + G +VH GF N V N L+ + KCG L +F+ + VV+WSS+
Sbjct: 121 LFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSL 180
Query: 166 IVGFA 170
I G+A
Sbjct: 181 IAGYA 185
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 216/372 (58%), Gaps = 5/372 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H+YASCG A +F+ M +++ +WN M+ G + A+ +F SM +R+VRSW
Sbjct: 155 LIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSW 214
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+S I G K G EA+ VF +M G K NEVT+V+VL ACA LG L+ G+ +H++
Sbjct: 215 SSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIID 274
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMHXXXXXXX 179
N + + +L+DMY KCG +EE VF G+ + V W++MI G A H
Sbjct: 275 NLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESL 334
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVD 238
M G++ + +T++ +L AC+H GLV + ++++R G+ P EHY C+VD
Sbjct: 335 KLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKR--GMTPTSEHYACMVD 392
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+L+RAG+L A + I + + P + GA+ GC H+N LAE R L +LD NDG
Sbjct: 393 VLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNNDGR 452
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
Y+ +SNVYA +W++ +R M+ RGVKK+PG S + I + H F+A D+THP +
Sbjct: 453 YIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFVEISEIHHRFIAHDKTHPDSDET 512
Query: 359 FEMWEKLLVKMK 370
+ M ++ +MK
Sbjct: 513 YSMLHFVVCQMK 524
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 36/289 (12%)
Query: 37 LINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTV 96
L N G + + +FS + + SW +I G + +L +F +M + G P+ +T
Sbjct: 58 LSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTY 117
Query: 97 VAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG-------------- 142
++ A A+L + G SVH G + ++ N+LI MY CG
Sbjct: 118 PFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQG 177
Query: 143 -------CLEEGY----------RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
+ +GY +VFE M+ER V SWSS I G+ M
Sbjct: 178 KNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKM 237
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
VG K N VT + VL AC+H+G + KGR + + + + V LVD+ ++ G
Sbjct: 238 RAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTS-LVDMYAKCGA 296
Query: 246 LEEAREVIANMSVPPNRV-VWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
+EEA V +S V +W A++GG H L EE+++ ++ +
Sbjct: 297 IEEALFVFRGISKSQTDVFIWNAMIGGLATHG---LVEESLKLFKEMQM 342
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 202/376 (53%), Gaps = 33/376 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ CGE +R +FD MP RD TWN I+
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAIS-------------------------- 293
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
A+ GM +EA+ +F M+++G PN+VT+ AVL ACA +G L+ GK + +A
Sbjct: 294 -----AYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATH 348
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G +++V ALIDMY KCG LE RVF M + SW++MI A H
Sbjct: 349 RGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSL 408
Query: 182 XXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M G +PN +TF+ +L AC H GLVD+G L +M +G+VP +EHY C+VDL
Sbjct: 409 FERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDL 468
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
LSRAG L EA +VI M P+ V GAL C+ KN+ + E ++ L +LD N G Y
Sbjct: 469 LSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNY 528
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
++ S +Y W++ +R+R LM+ GV KTPGCS I + + EF++GD + +
Sbjct: 529 IISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVR 588
Query: 360 EMWEKLLVKMKMKGYI 375
+ + L ++K +GY+
Sbjct: 589 NIIDLLYEELKKEGYL 604
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 164/333 (49%), Gaps = 24/333 (7%)
Query: 7 ASCGETRHARL----MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWT 62
A+ E R ARL +F D T N M+ G G AR +F + ++++ SW
Sbjct: 128 ANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWN 187
Query: 63 SVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ G AK G EA++VF + E+ G +P+E+++V+VL AC +LGDLE G+ V F
Sbjct: 188 SLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE 247
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G N Y+ +ALI MY KCG L R+F+GM R ++W++ I +A +
Sbjct: 248 RGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISL 307
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH----YGCLV 237
M G+ PN VT VL AC+ +G +D G+ + +Y G++H L+
Sbjct: 308 FHSMKENGVDPNKVTLTAVLSACASIGALDLGKQM-----DEYATHRGLQHDIFVATALI 362
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD----- 292
D+ ++ G LE A+ V +M N W A++ H A+EA+ ++
Sbjct: 363 DMYAKCGSLESAQRVFNDMP-RKNDASWNAMISALASHGK---AKEALSLFERMSDEGGS 418
Query: 293 -LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
ND +V + + AG +E R+ +M +
Sbjct: 419 ARPNDITFVSLLSACVHAGLVDEGYRLFDMMST 451
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/402 (19%), Positives = 163/402 (40%), Gaps = 49/402 (12%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM-PQRNVR 59
+LL L C T+ + + + I N +++ I++ + +FS + P N
Sbjct: 23 LLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHITPHPNDY 82
Query: 60 SWTSVIYGLAKCGMCEE-ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
++ ++ L ++ +M+ PN T V +ACA L ++ + H
Sbjct: 83 AFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCE 142
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA-MHXXXXX 177
G + + N+++ MY +CG +VF+ + E+ +VSW+S++ G+A +
Sbjct: 143 VFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREA 202
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR-------------------ALLT 218
G +P+ ++ + VL AC +G ++ GR AL++
Sbjct: 203 VEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALIS 262
Query: 219 IM---------RRDYGIVPGVEH--YGCLVDLLSRAGRLEEAREVIANMS---VPPNRVV 264
+ RR + +P + + + ++ G +EA + +M V PN+V
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVT 322
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY-VVMSNVYAEAGKWEEVSRIRRLMK 323
A+L C + L ++ + + L +D + + ++YA+ G E R+ M
Sbjct: 323 LTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMP 382
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
+ D + ++ +H +AK ++E++
Sbjct: 383 RKN------------DASWNAMISALASHGKAKEALSLFERM 412
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 245/461 (53%), Gaps = 22/461 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+LY CG A+ +F M ++ TWN MIA G A+ + + + N+ ++
Sbjct: 325 LLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIA--------GHAQMM--ELSKDNLSAY 374
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
I EAL +FS++ + G KP+ T +VL C+++ LE G+ +H
Sbjct: 375 QKGI----------EALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIK 424
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GFL +V V +++I+MY KCG +E +VF M RT++ W++MI GFA H
Sbjct: 425 TGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNL 484
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M VG++PN VTF+GVL AC G+V++ IM+++Y I P ++HY CLVD+L
Sbjct: 485 FEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLV 544
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R G+++EA ++I M + +W L+ GC N+ L +A L L + Y +
Sbjct: 545 RLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKL 604
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+ N Y AG++++VSR+ +M+ + + S I+I V+ F D+ ++ I +
Sbjct: 605 LLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWISIKDRVYSFQTNDKADIES-SIGKS 663
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
E L +K K GY V D E K +Y HSEKLA+ +GL N +R++K
Sbjct: 664 LEDLHIKAKNLGYEMLEYVEKSDKEKEKTSSPTIY-HSEKLAITFGLENLPNSSPVRVVK 722
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTC 462
N +C D H K +S + +REI+V+D R H F +G C+C
Sbjct: 723 NTLMCRDSHNFVKYISTLTSREIIVKDSKRLHKFVNGQCSC 763
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 15/239 (6%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKD--GSKPNEVTVVAVLVACAQLG 107
F + +++V SWT+ I + G + ++VF EM D +PNE T+ + L C ++
Sbjct: 239 FRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVK 298
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIV 167
LE G VH G+ N+ V N+L+ +Y+KCGC+ E R+F+GM + +V+W++MI
Sbjct: 299 CLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIA 358
Query: 168 GFAM-----------HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
G A + + R GMKP+ TF VL CS + +++G +
Sbjct: 359 GHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQI 418
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ G + V ++++ ++ G +E A +V MS+ ++W ++ G H
Sbjct: 419 HARTIKT-GFLSDVVVGSSMINMYNKCGSIERASKVFLEMSI-RTMILWTTMITGFAQH 475
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 6/235 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAV 99
G + A+ +F M +RN +WT+++ G + M + A+ +F EM P+ T+
Sbjct: 127 GRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIA 186
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC-LEEGYRVFEGMRERT 158
L AC L L+ G+ +H + + + NAL +Y KCG LE G F ++E+
Sbjct: 187 LNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKD 246
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMI--RVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
V+SW++ I M+ V ++PN T L C V ++ G +
Sbjct: 247 VISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQV 306
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + G + L+ L + G + EA+ + M+ N V W A++ G
Sbjct: 307 HALCTK-LGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMN-DVNLVTWNAMIAG 359
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 202/342 (59%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A F MP ++ W +I ++ G E A+ +F +M G+K + V++ A L
Sbjct: 529 GRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATL 588
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L +GK +H F N F+ + +V + LIDMY KCG L VF+ M + V
Sbjct: 589 SACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEV 648
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW+S+I + H M+ G++P++VTF+ ++ AC H GLVD+G M
Sbjct: 649 SWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCM 708
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+YGI +EH+ C+VDL RAGRL EA + I +M P+ WG+LLG CRLH N+ L
Sbjct: 709 TEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVEL 768
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
A+ A +HL +LD N GYYV++SNV+A AG+WE V ++R LMK +GV+K PG S I ++G
Sbjct: 769 AKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNG 828
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVL 382
H F A D HPQ+ I+ + + LL++++ GY+P + L
Sbjct: 829 GTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQPYLPL 870
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ + +I + GY+ A+ LF +P R+ W ++ G K G AL F EM
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
KPN V+ V +L CA G + G +H +GF + V N +I MY KCG L
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF 330
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+ ++F+ M + V+W+ +I G+ + M+ G+K + +TF L +
Sbjct: 331 DARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVL 390
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
G + + + + + R +G+ V LVD+ + G +E A
Sbjct: 391 KSGSLKYCKEVHSYIVR-HGVPFDVYLKSALVDIYFKGGDVEMA 433
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 4/247 (1%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D N +I G + AR +F MPQ + +W +I G + G +EA+ +F
Sbjct: 310 ESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKA 369
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G K + +T + L + + G L++ K VH + +G +VY+ +AL+D+Y K G
Sbjct: 370 MVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGD 429
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+E + F+ V ++MI G+ ++ +I+ GM PN +T VL A
Sbjct: 430 VEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPA 489
Query: 204 CSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
C+ + + G+ L I+++ G+ + + + +++GRL+ A + M V +
Sbjct: 490 CAALASLKLGKELHCDILKK--GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPV-KDS 546
Query: 263 VVWGALL 269
V W ++
Sbjct: 547 VCWNLMI 553
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 37 LINVGYVGAARDLFSSMPQRN----VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
L+++ + G ++ Q+N V T++I G G+ EAL +F + ++G PN
Sbjct: 420 LVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPN 479
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+T+ +VL ACA L L+ GK +H G V +++ MY K G L+ Y+ F
Sbjct: 480 CLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFR 539
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M + V W+ MIV F+ + M G K + V+ L AC++ +
Sbjct: 540 RMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYY 599
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G+ L + R+ + L+D+ S+ G+L AR V +M N V W +++
Sbjct: 600 GKELHCFVVRN-SFISDTFVASTLIDMYSKCGKLALARSVF-DMMDWKNEVSWNSIIAA 656
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 99/212 (46%), Gaps = 4/212 (1%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W +I G + G + AL F M P++ T V+ AC L ++ K VH A+
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELAR 204
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
GF ++++ ++LI +Y G + + +F+ + R + W+ M+ G+ +
Sbjct: 205 SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALG 264
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDL 239
M +KPN V+F+ +L C+ G+V G L ++R + P V + ++ +
Sbjct: 265 TFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TIITM 322
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
S+ G L +AR++ M + V W L+ G
Sbjct: 323 YSKCGNLFDARKIFDIMP-QTDTVTWNGLIAG 353
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 252/507 (49%), Gaps = 56/507 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ------ 55
L+ +Y CG+ + A+ +FD M +RD+ +WN +I G+ G A +LF M +
Sbjct: 395 LIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPN 454
Query: 56 ----------------------------------RNVRSWTSVIYGLAKCGMCEEALKVF 81
RN SW S+I G + G ++AL++F
Sbjct: 455 IITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIF 514
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
M+ PN VT++++L CA L + K +H FA + + V N LID Y K
Sbjct: 515 RNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKS 574
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
G L +F + + VSW+SM+ + +H M + G++PN TF +L
Sbjct: 575 GNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASIL 634
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
A H G+VD+G+++ + + +DY + G+EHY +V LL R+G+L EA + I +M + PN
Sbjct: 635 LAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPN 694
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
VWGALL CR+H+N +A A + + + + N+ ++S Y+ GK+E
Sbjct: 695 SSVWGALLTACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFEPEGE---- 750
Query: 322 MKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
+ V K G S I + VVH FV GD+++P + +++ V +K ++ D +
Sbjct: 751 ---KAVNKPIGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKT--HVSDNELY 805
Query: 382 LLDLEDAKQKEIFLYRHSEKLALVYGLIN--TKPGMSIRIMKNLRVCEDCHAAFKLVSEI 439
+ + E + HSEKLA + LI+ KP + +RI+K LR+C DCH K +S
Sbjct: 806 IEEEEKENTSSV----HSEKLAFAFALIDPHNKPQI-LRIVKKLRMCRDCHDTAKYISMA 860
Query: 440 ENREIVVRDRNRFHCFKDGACTCKDYW 466
EI + D N H FK G C+C+DYW
Sbjct: 861 YGCEIYLSDSNCLHHFKGGHCSCRDYW 887
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 161/394 (40%), Gaps = 60/394 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----- 56
++ +YA CGE A+ +FD M +RD WN MI+ G +G A+ F +M +
Sbjct: 224 IMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPS 283
Query: 57 ----------------------------------NVRSWTSVIYGLAKCGMCEEALKVFS 82
+V +WTS+I G + G AL +
Sbjct: 284 LVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLK 343
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
EM G + N +T+ + ACA L L G +H A + NV V N+LIDMY KCG
Sbjct: 344 EMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCG 403
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
L+ +F+ M ER V SW+S+I G+ M PN +T+ ++
Sbjct: 404 DLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMIT 463
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VP 259
G D+ L + +D + L+ ++G+ ++A ++ NM +
Sbjct: 464 GYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHIL 523
Query: 260 PNRVVWGALLGGC----------RLH----KNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
PN V ++L C +H + I+++E ++ +L G + N+
Sbjct: 524 PNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNI 583
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
+ E W++ ++ S + GCS +D
Sbjct: 584 FNELS-WKDAVSWNSMLSSYVLH---GCSESALD 613
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 195/430 (45%), Gaps = 24/430 (5%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G +G AR +F+ M RN+ +W+++I G ++ E + +F M +DG P+E + VL
Sbjct: 131 GLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVL 190
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
AC + DLE G+ +H G + ++ N+++ +Y KCG ++ ++F+ M ER V
Sbjct: 191 QACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSV 250
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W++MI GF + M + G++P+ VT+ ++ + +G D L+ M
Sbjct: 251 AWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKM 310
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKN 277
+GI P V + ++ ++ GR+ A +++ M V N + + C K+
Sbjct: 311 EW-FGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKS 369
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSN----VYAEAGKWEEVSRIRRLMKSRGVKK---- 329
+ + E K++L+++ V++ N +Y + G + I +M R V
Sbjct: 370 LSMGLEIHSIAVKMNLVDN---VLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSI 426
Query: 330 TPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAK 389
G G HE + I W +++ M+ D + LDL +
Sbjct: 427 IGGYFQAGFCGKAHELFMKMQESDSPPNIIT-WN-IMITGYMQSGAEDQA---LDLFKSI 481
Query: 390 QKEIFLYRHSEKL-ALVYGLINT-KPGMSIRIMKNLRVCEDCHAAFKLVS--EIENREIV 445
+K+ R++ +L+ G + + + +++I +N++ C + ++S + +
Sbjct: 482 EKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVA 541
Query: 446 VRDRNRFHCF 455
+ HCF
Sbjct: 542 SKKVKEIHCF 551
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 7/202 (3%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV--Y 129
G EA+ + + + G + +T + +L +C + GK +H G + NV +
Sbjct: 62 GSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRI---GLVENVNPF 118
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V L+ MY KCG L +VF M R + +WS+MI G + + M+R G
Sbjct: 119 VETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDG 178
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+ P+ VL AC ++ GR + +++ R G+ ++ + ++ G ++ A
Sbjct: 179 VLPDEFLLPKVLQACGKCRDLETGRLIHSMVIR-RGMRWSKHLRNSIMAVYAKCGEMDCA 237
Query: 250 REVIANMSVPPNRVVWGALLGG 271
+++ M + V W A++ G
Sbjct: 238 KKIFDCMD-ERDSVAWNAMISG 258
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 1 MLLHLYASCGETRH---ARLMFDKMPQRDIATW-----NIMIAHLINVGYVGAARDLFSS 52
+L + +CG+ R RL+ + +R + W N ++A G + A+ +F
Sbjct: 185 LLPKVLQACGKCRDLETGRLIHSMVIRRGM-RWSKHLRNSIMAVYAKCGEMDCAKKIFDC 243
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC-AQLGDLEF 111
M +R+ +W ++I G + G +A K F M+KDG +P+ VT +L++C QLG +
Sbjct: 244 MDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVT-WNILISCYNQLGHCDL 302
Query: 112 GKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAM 171
+ R + G +VY +W+SMI GF
Sbjct: 303 AIDLMRKMEWFGIAPDVY-------------------------------TWTSMISGFTQ 331
Query: 172 HXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE 231
M G++ N +T AC+ + + G + +I + +V V
Sbjct: 332 KGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVK-MNLVDNVL 390
Query: 232 HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L+D+ + G L+ A+ + MS + W +++GG
Sbjct: 391 VGNSLIDMYCKCGDLKAAQHIFDMMS-ERDVYSWNSIIGG 429
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 218/374 (58%), Gaps = 6/374 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y G+ AR +FD++P ++ +W++MI+ VG V +AR F P+++ W
Sbjct: 148 LMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIW 207
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + +E+L +F M+ P+E V++L ACA LG LE G +H+
Sbjct: 208 GAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQ 267
Query: 122 NGFLR-NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ +V + +L+DMY KCG LE R+F+ M R VV W++MI G AMH
Sbjct: 268 LKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALK 327
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M +VG+KP+ +TFI V ACS+ G+ +G LL M Y IVP EHYGCLVDLL
Sbjct: 328 LFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLL 387
Query: 241 SRAGRLEEA----REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD-LLN 295
SRAG EEA R++ + + + W A L C H LAE A + +LD ++
Sbjct: 388 SRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQLDNHIH 447
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
G YV++SN+YA +GK + R+R +MK +G K PGCSS+ IDGV+ EF+AG++THPQ
Sbjct: 448 SGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVISEFIAGEKTHPQM 507
Query: 356 KGIFEMWEKLLVKM 369
+ I + +K+ +++
Sbjct: 508 EEIHSVLKKMHMQL 521
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 32/258 (12%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F + V + ++I + AL+VF +M + KP+ T+ VL AC D
Sbjct: 63 VFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHD 122
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
FGK +H ++ G + ++YV N+L+ MY G + VF+ + VVSWS MI G
Sbjct: 123 CSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISG 182
Query: 169 FA-------------------------------MHXXXXXXXXXXXXMIRVGMKPNYVTF 197
+A + M + P+ F
Sbjct: 183 YAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIF 242
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+ +L AC+H+G ++ G + + + + V L+D+ ++ G LE A+ + +M+
Sbjct: 243 VSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMN 302
Query: 258 VPPNRVVWGALLGGCRLH 275
+ + V W A++ G +H
Sbjct: 303 M-RDVVCWNAMISGMAMH 319
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 2 LLHLYASCGETRHARLMFDK-------------------------------MPQRDIATW 30
LL+ Y+ CG AR +FD+ MP + + +W
Sbjct: 165 LLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSW 224
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +IA I +G V AAR +F MP+RN SW S+I G AL++FSEM+ G K
Sbjct: 225 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 284
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P EVT++++L ACA+ G LE G ++ K Y+ NAL++MY KCG L + +
Sbjct: 285 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEI 344
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM---IRVGMKPNYVTFIGVLHACSHV 207
F GM+ +TV W++M++G A+H M + ++P+ VTFIGVL ACSH
Sbjct: 345 FNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHK 404
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
GLVDK R M + Y IVP +HYGC+VDLLSR G LEEA ++I + V+W
Sbjct: 405 GLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRT 464
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
LLG CR N LAE + + L+KL L DG YV++SN+YAEAG+W+EV R+R M V
Sbjct: 465 LLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHV 524
Query: 328 KKTPGCSSITI 338
+ G S I +
Sbjct: 525 PRQAGYSQINM 535
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 2 LLHLYASCGETRHARLMFDK-------------------------------MPQRDIATW 30
LL+ Y+ CG AR +FD+ MP + + +W
Sbjct: 167 LLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVISW 226
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +IA I +G V AAR +F MP+RN SW S+I G AL++FSEM+ G K
Sbjct: 227 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 286
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P EVT++++L ACA+ G LE G ++ K Y+ NAL++MY KCG L + +
Sbjct: 287 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEI 346
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM---IRVGMKPNYVTFIGVLHACSHV 207
F GM+ +TV W++M++G A+H M + ++P+ VTFIGVL ACSH
Sbjct: 347 FNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHK 406
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
GLVDK R M + Y IVP +HYGC+VDLL+R G LEEA ++I + V+W
Sbjct: 407 GLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRT 466
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
LLG CR N LAE + + L+KL L DG YV++SN+YAEAG+W+EV R+R M V
Sbjct: 467 LLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHV 526
Query: 328 KKTPGCSSITI 338
+ G S I +
Sbjct: 527 PRQAGYSQINM 537
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 207/358 (57%), Gaps = 3/358 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y CG AR +FD M ++++ W M+ ++ G + ARDLF P R+V W
Sbjct: 246 LLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLW 305
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + +EA+ +F EM+ G KP++ VVA+L CAQLG LE G+ +H + +
Sbjct: 306 TAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYVRE 365
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N + + V +LI+MY KCGC+E+ VF G++E+ SW+S+I G AM+
Sbjct: 366 NRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIEALEL 425
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G KP+ VTFI +L+ACSH GLV++G L M YGI P +EHYGC +DLL
Sbjct: 426 FEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFIDLLG 485
Query: 242 RAGRLEEAREVIANMSVPPNRV---VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
RAG L EA E+I + N ++G+ L CR + N + E L K+ +
Sbjct: 486 RAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACRTYGNTDMGERIATALEKVKSSDSSL 545
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
+ +++++YA A +WE+ S+ R MK ++K PGCS+I +DG ++ GD + ++K
Sbjct: 546 HSLLASIYASADRWEDASKTRSKMKDLHIRKVPGCSAIEVDGSGNQGGVGDFSSFRSK 603
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 141/338 (41%), Gaps = 19/338 (5%)
Query: 2 LLHLYASCGETRHAR----LMFDKMPQRDIATWNIMIA---HLINVGYVGAARDLFSSMP 54
L+ L +C H + L+F +D T N + + HL N Y + +F+
Sbjct: 5 LISLLKNCKSIFHLQQIHSLIFTTGLHQDTHTLNKLFSVSIHLNNNNYFHYSLSIFNHTL 64
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
++ + +I K + + +F+++ +G P+ T VL A A + D G
Sbjct: 65 HPSLFLYNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIADFRQGTK 124
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXX 174
+H F G + YV N+ +DMY + G ++ ++F+ + ER VSW+ MI G
Sbjct: 125 IHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRR 184
Query: 175 XXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM---RRDYGIVPGV 230
M + K + T + L AC+ V+ G+ + + D+ + G
Sbjct: 185 FEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTMRMG- 243
Query: 231 EHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
L+D+ + G + ARE+ M + N W +++ G + A +
Sbjct: 244 ---NALLDMYCKCGYVSVAREIFDGM-IEKNVNCWTSMVTGYVSCGELDKARDLFDKSPT 299
Query: 291 LDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
D++ + M N Y + +++E + M+ RGVK
Sbjct: 300 RDVV---LWTAMINGYVQFNRFDEAVALFEEMQVRGVK 334
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 198/350 (56%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A + + +R SW S+I G + E AL FS M + G P+ T VL
Sbjct: 522 GMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVL 581
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
CA L +E GK +H +VY+ + ++DMY KCG +++ +FE +R V
Sbjct: 582 DICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYV 641
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+WS+MI +A H M +KPN+ FI VL AC+H+G VDKG M
Sbjct: 642 TWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREM 701
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R YG+ P +EHY C+VDLL R+G++ EA E+I +M + V+W LLG CRL N+ +
Sbjct: 702 RSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEV 761
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
AE+A L +LD + YV++SNVYA AG W EV++IR MK+ +KK PGCS I +
Sbjct: 762 AEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRD 821
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQ 390
VH F+ GD+ HP+++ I++ L+ +MK GY+P+ LLD E +Q
Sbjct: 822 EVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQ 871
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL Y C +A +FDKMPQRD+ +WN MI VG + A+ LF SMP+R+V SW
Sbjct: 79 LLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSW 138
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ + G +++++F++M + + T VL AC + D G VH A
Sbjct: 139 NSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQ 198
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF +V AL+DMY C L+ + +F M ER V WS++I G+ +
Sbjct: 199 MGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKL 258
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI-MRRDYGIVPGVEHYGCLVDLL 240
M+ GM + TF +C+ + + G L ++ ++G V +D+
Sbjct: 259 YKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TATLDMY 316
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
++ R+ +AR+V N P R AL+ G ++ A E R L K
Sbjct: 317 AKCDRMVDARKVF-NTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQK 365
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L +YA CG A L+FD M +D SW
Sbjct: 413 ILDMYAKCGALMEACLIFDDMEIKDAV-------------------------------SW 441
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I + EE L +F M + +P++ T +V+ ACA L +G VH
Sbjct: 442 NAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+G + +V +A+IDMY KCG L E ++ E + ERT VSW+S+I GF+
Sbjct: 502 SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY 561
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M++VG+ P+ T+ VL C+++ V+ G+ + + + + V +VD+ S
Sbjct: 562 FSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK-LQLHSDVYIASTIVDMYS 620
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+ G ++++R ++ + + V W A++ H L E+A++ ++ L N
Sbjct: 621 KCGNMQDSR-IMFEKAPKRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQN 670
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F++ P +S ++I G A+ EAL++F ++K +E+++ L AC+
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ G +H A G N+ V N ++DMY KCG L E +F+ M + VSW+++
Sbjct: 385 IKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS-----HVGLVDKGRALLTIM 220
I + M+R M+P+ TF V+ AC+ + G+ GR + + M
Sbjct: 445 IAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
D+ + + +D+ + G L EA ++ + V W +++ G K
Sbjct: 505 GLDWFVGSAI------IDMYCKCGMLVEAEKIHERLE-ERTTVSWNSIISGFSSEKQ--- 554
Query: 281 AEEAMRHLSKL 291
E A+ + S++
Sbjct: 555 GENALSYFSRM 565
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 43/215 (20%)
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
++T + C+ L + GK H GF+ V+V N L+ Y KC L + VF+
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 153 GMRERTVVSWSSMIVGFA-------------------------------MHXXXXXXXXX 181
M +R V+SW++MI G+A +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL----LTI-MRRDYGIVPGVEHYGCL 236
M + ++ +Y TF VL AC+ G+ D G L L I M D +V G L
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTGT----AL 211
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
VD+ S +L+ A + M N V W A++ G
Sbjct: 212 VDMYSTCKKLDHAFNIFCEMP-ERNSVCWSAVIAG 245
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y+ CG + +R+MF+K P+RD TW+ MI
Sbjct: 615 IVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMIC-------------------------- 648
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
A G+ E+A+K+F EM+ KPN ++VL ACA +G ++ G R +
Sbjct: 649 -----AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRS 703
Query: 122 N-GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
+ G + + ++D+ + G + E + E M E V W +++
Sbjct: 704 HYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLL 750
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 198/350 (56%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A + + +R SW S+I G + E AL FS M + G P+ T VL
Sbjct: 522 GMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVL 581
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
CA L +E GK +H +VY+ + ++DMY KCG +++ +FE +R V
Sbjct: 582 DICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYV 641
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+WS+MI +A H M +KPN+ FI VL AC+H+G VDKG M
Sbjct: 642 TWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREM 701
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
R YG+ P +EHY C+VDLL R+G++ EA E+I +M + V+W LLG CRL N+ +
Sbjct: 702 RSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEV 761
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
AE+A L +LD + YV++SNVYA AG W EV++IR MK+ +KK PGCS I +
Sbjct: 762 AEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRD 821
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQ 390
VH F+ GD+ HP+++ I++ L+ +MK GY+P+ LLD E +Q
Sbjct: 822 EVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEEVDEQ 871
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL Y C +A +FDKMPQRD+ +WN MI VG + A+ LF SMP+R+V SW
Sbjct: 79 LLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSW 138
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ + G +++++F++M + + T VL AC + D G VH A
Sbjct: 139 NSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQ 198
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF +V AL+DMY C L+ + +F M ER V WS++I G+ +
Sbjct: 199 MGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKL 258
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI-MRRDYGIVPGVEHYGCLVDLL 240
M+ GM + TF +C+ + + G L ++ ++G V +D+
Sbjct: 259 YKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TATLDMY 316
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
++ R+ +AR+V N P R AL+ G ++ A E R L K
Sbjct: 317 AKCDRMVDARKVF-NTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQK 365
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 36/294 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L +YA CG A L+FD M +D SW
Sbjct: 413 ILDMYAKCGALMEACLIFDDMEIKDAV-------------------------------SW 441
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I + EE L +F M + +P++ T +V+ ACA L +G VH
Sbjct: 442 NAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+G + +V +A+IDMY KCG L E ++ E + ERT VSW+S+I GF+
Sbjct: 502 SGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSY 561
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M++VG+ P+ T+ VL C+++ V+ G+ + + + + V +VD+ S
Sbjct: 562 FSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK-LQLHSDVYIASTIVDMYS 620
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+ G ++++R ++ + + V W A++ H L E+A++ ++ L N
Sbjct: 621 KCGNMQDSR-IMFEKAPKRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQN 670
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F++ P +S ++I G A+ EAL++F ++K +E+++ L AC+
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSA 384
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ G +H A G N+ V N ++DMY KCG L E +F+ M + VSW+++
Sbjct: 385 IKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAI 444
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS-----HVGLVDKGRALLTIM 220
I + M+R M+P+ TF V+ AC+ + G+ GR + + M
Sbjct: 445 IAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM 504
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
D+ + + +D+ + G L EA ++ + V W +++ G K
Sbjct: 505 GLDWFVGSAI------IDMYCKCGMLVEAEKIHERLE-ERTTVSWNSIISGFSSEKQ--- 554
Query: 281 AEEAMRHLSKL 291
E A+ + S++
Sbjct: 555 GENALSYFSRM 565
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 43/215 (20%)
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
++T + C+ L + GK H GF+ V+V N L+ Y KC L + VF+
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 153 GMRERTVVSWSSMIVGFA-------------------------------MHXXXXXXXXX 181
M +R V+SW++MI G+A +
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL----LTI-MRRDYGIVPGVEHYGCL 236
M + ++ +Y TF VL AC+ G+ D G L L I M D +V G L
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACT--GIEDYGLGLQVHCLAIQMGFDSDVVTGT----AL 211
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
VD+ S +L+ A + M N V W A++ G
Sbjct: 212 VDMYSTCKKLDHAFNIFCEMP-ERNSVCWSAVIAG 245
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +Y+ CG + +R+MF+K P+RD TW+ MI
Sbjct: 615 IVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMIC-------------------------- 648
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
A G+ E+A+K+F EM+ KPN ++VL ACA +G ++ G R +
Sbjct: 649 -----AYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRS 703
Query: 122 N-GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
+ G + + ++D+ + G + E + E M E V W +++
Sbjct: 704 HYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLL 750
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 137/368 (37%), Positives = 212/368 (57%), Gaps = 8/368 (2%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM-------PQR-NVRSWTSVIY 66
A +F + + + +WN +I+ + G A ++F + P R NV SW++VI
Sbjct: 317 AHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVIS 376
Query: 67 GLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR 126
G A G E++L++F +M+ N VT+ +VL CA+L L G+ +H +A N
Sbjct: 377 GFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHAYAIRNLMDD 436
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
N+ V N L++MY+KCG EE + VF+ ++ R ++SW+S+I G+ MH MI
Sbjct: 437 NILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRTFDEMI 496
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
G++P+ +TF+ VL ACSH GLV GR L M ++ I P VEHY C+VDLL RAG L
Sbjct: 497 NAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACMVDLLGRAGLL 556
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVY 306
+EA +++ NM + PN VWGALL CR++++ L EE + L G ++++SN+Y
Sbjct: 557 QEAHDIVRNMPIEPNECVWGALLNSCRMYRDTDLIEEIESRILALKSEITGSFMLLSNIY 616
Query: 307 AEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 366
A++GK E+ +R+R K +G KK PG S I + V+ F AG+ H + IF + +L
Sbjct: 617 ADSGKREDSARVRVSAKEKGFKKIPGQSWIEVRKKVYTFSAGNVVHLEQDEIFAILNELA 676
Query: 367 VKMKMKGY 374
++M Y
Sbjct: 677 LQMASVHY 684
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 11/236 (4%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLI----NVGYVGAARDLFSSMPQRNVRS 60
L+ C + AR + ++ + + A LI + AR +F++ P ++ +
Sbjct: 32 LHHQCFTLQQARQIHTQLILTTTHHSSFLSARLIATYSRFNSISEARKIFTTTPFESLSN 91
Query: 61 --WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
W S+I G A+K++ +M K G P+ T+ ++ +C+++G + K VH
Sbjct: 92 LVWNSIIRANVSHGYYNYAVKIYHQMMKFGFLPDGFTLPLIIKSCSKIGSVGLCKIVHCH 151
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
GF +V+V N L+ MY K +E+ +VF+GM R+V+SW++++ G+A +
Sbjct: 152 VLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGA 211
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M G++PNYVT+ +L + + GL D+ L +MR + G+E G
Sbjct: 212 FRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMR-----IKGIEISG 262
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 143/338 (42%), Gaps = 57/338 (16%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIA-HLINVGYVGAARDLFSSMP----QR 56
L+ +Y A +FD M R + +WN +++ + N YVGA R +F M +
Sbjct: 167 LVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFR-VFKRMELEGLEP 225
Query: 57 NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
N +WTS++ A+CG+ +E +++F M G + + V VL CA + ++ GK +H
Sbjct: 226 NYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIH 285
Query: 117 RFAKGNGFLRNVYVCNALIDMYVK--------------------------------CGCL 144
F G+ ++V NALI +Y K G
Sbjct: 286 GFVIKGGYEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLC 345
Query: 145 EEGYRVFEGMRER--------TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
++ Y VF + + V+SWS++I GFA M + N VT
Sbjct: 346 DDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVT 405
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRR---DYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
VL C+ + ++ GR L R D I+ G LV++ + G EEA V
Sbjct: 406 ISSVLSVCAELAALNLGRELHAYAIRNLMDDNILVG----NGLVNMYMKCGVFEEAHLVF 461
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
N+ + + W +L+GG +H L E A+R ++
Sbjct: 462 DNIK-GRDLISWNSLIGGYGMHG---LGENAVRTFDEM 495
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 210/392 (53%), Gaps = 31/392 (7%)
Query: 13 RHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS------------ 60
+ AR +FD MP R+ +W +MI+ L+ G A ++F MPQ+NV +
Sbjct: 173 KRARALFDAMPSRNEVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQG 232
Query: 61 -------------------WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV 101
W +I G A+ G EEAL +FS+M + G +P+++T V++
Sbjct: 233 KIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFT 292
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
ACA L L+ G+ + A +G ++ V NAL+ MY KCG + F+ + +VS
Sbjct: 293 ACASLALLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVS 352
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
W+++I FA H M+ G+ P+ +TF+ +L AC G VD+ L +M
Sbjct: 353 WNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMV 412
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLA 281
YGI+P EHY C+VD++SRAG+L A +VI M + +WGA L GC +H N+ L
Sbjct: 413 HKYGILPRSEHYSCVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVGCNIHSNVKLG 472
Query: 282 EEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGV 341
E A R + LD N G YV+MSN+YA AGKW++V+R+R LMK +G+KK S + I
Sbjct: 473 ELAARSILNLDPYNSGAYVMMSNIYAAAGKWKDVNRMRVLMKEQGIKKQTAYSWMQIGNK 532
Query: 342 VHEFVAGDETHPQAKGIFEMWEKLLVKMKMKG 373
+ FV GD +HP I + + + MK KG
Sbjct: 533 LQCFVGGDPSHPNIDDIHDASMMITLHMKAKG 564
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 158/356 (44%), Gaps = 45/356 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L Y G +H++ +F+ +P ++I +WN +I I + A F++MP++NV S+
Sbjct: 66 MLTAYWQNGFLQHSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVASY 125
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ G K G EEA KVF E+ +PN VV+ V +E G + R A+
Sbjct: 126 NAMMSGFVKMGRVEEAKKVFEEIP----RPN---VVSYTVMIDGYMKMEGGSGIKR-ARA 177
Query: 122 ----------------------NG--------FLR----NVYVCNALIDMYVKCGCLEEG 147
NG F+R NV A+I + K G ++E
Sbjct: 178 LFDAMPSRNEVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEA 237
Query: 148 YRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHV 207
+ +F+ +R + W+ MI GFA + M+R GM+P+ +TF+ + AC+ +
Sbjct: 238 WNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASL 297
Query: 208 GLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
L+D+GR + + +G+ + LV + S+ G + + +S P+ V W
Sbjct: 298 ALLDEGRQTNALAIK-HGLNSDLSVSNALVTMYSKCGEIVISELAFDQIS-HPDIVSWNT 355
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKLDLLNDG-YYVVMSNVYAEAGKWEEVSRIRRLM 322
++ H A H+ + DG ++ + + AGK +E + LM
Sbjct: 356 IIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLM 411
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
Q+D+ N+ I L G + AAR LF Q+++ ++ S++ + G + + +F+
Sbjct: 26 QQDVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNS 85
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+ N V+ +++ AC Q ++ S +NV NA++ +VK G
Sbjct: 86 IP----IKNIVSWNSIITACIQNDNINDAFSYFTAMPE----KNVASYNAMMSGFVKMGR 137
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGF 169
+EE +VFE + VVS++ MI G+
Sbjct: 138 VEEAKKVFEEIPRPNVVSYTVMIDGY 163
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 201/339 (59%), Gaps = 2/339 (0%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
M++ YA GE AR +F+ MP+R+ W+ M+ G V A +F +P RN+
Sbjct: 186 MMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEI 245
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W S+I G + G E+AL+ F EM DG +P+E TVV+VL ACAQLGDL+ GK +H +
Sbjct: 246 WNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIE 305
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G N +V + LIDMY KCG L VFE ER V W++MI GFA++
Sbjct: 306 CKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLE 365
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M ++P+ VTFI VL AC+H GLV + +++ M +YGI G+ HYGC+VDLL
Sbjct: 366 YLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKM-EEYGIEMGIRHYGCMVDLL 424
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS-KLDLLNDGYY 299
RAGRL+EA E+I M + PN V GA++G C +H ++ +AE+ M+ + + +
Sbjct: 425 GRAGRLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKMIGVDSAACVNSHN 484
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
V++SN+YA + KWE+ IR M G +K PGCSSI +
Sbjct: 485 VLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSIIL 523
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 19/298 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ YA CG AR +FD M +R+ TWN MI + G +A F MP + SW
Sbjct: 92 IVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSW 151
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV----ACAQLGDLEFGKSVHR 117
+ +I G A+ G A K F ++ P E+ V + A+ G++E + V
Sbjct: 152 SQMIGGFARNGDTLTARKFFDKV------PYELKDVVIWTMMVDGYAKKGEMEDAREVFE 205
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
RN +V ++++ Y K G + E +F + R + W+SMI G+ +
Sbjct: 206 LMPE----RNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEK 261
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M G +P+ T + VL AC+ +G +D G+ + ++ GI L+
Sbjct: 262 ALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECK-GIAVNQFVLSGLI 320
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
D+ ++ G L AR V + + N W A++ G ++ E + +L +++ N
Sbjct: 321 DMYAKCGDLVNARLVFESCN-ERNVFCWNAMIAGFAVNGQ---CNEVLEYLDRMEESN 374
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 221/375 (58%), Gaps = 5/375 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP----QRN 57
L+ +Y C + A++ FD++ +RD +TWN +I+ +G R+L M + N
Sbjct: 447 LVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPN 506
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V +W S++ GL + + A+++F+EM+ +P+ TV +L AC++L + GK VH
Sbjct: 507 VYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHA 566
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
++ G+ + ++ L+DMY KCG ++ Y+V+ + +V ++M+ +AMH
Sbjct: 567 YSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEE 626
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ ++P++VTF+ VL +C H G + G +M Y I P ++HY C+V
Sbjct: 627 GIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCMV 685
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
DLLSRAG+L+EA ++I NM + + V W ALLGGC +HK + L E A L +L+ N G
Sbjct: 686 DLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTG 745
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKG 357
YV+++N+YA AG+W ++++ R LM +G++K+PGCS I VH F+A D++H + +
Sbjct: 746 NYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEE 805
Query: 358 IFEMWEKLLVKMKMK 372
I+ M + L +++K
Sbjct: 806 IYFMLDNLTKFIRIK 820
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 133/309 (43%), Gaps = 9/309 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG--SKPNEVTVVAVLVAC 103
A +F M +N+ SWT+V+ G+ + +F E DG K + VL C
Sbjct: 85 AWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNIC 144
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
LGDLE G+ VH +GF+ NVYV NALIDMY KCG L+E +V EGM ++ VSW+
Sbjct: 145 CGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWN 204
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
S+I + M+ ++PN VT+ V+ S + L M
Sbjct: 205 SIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARM-VG 263
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREV---IANMSVPPNRVVWGALLGGCRLHKNIVL 280
G+ P ++ SR L +E+ I + N V AL+G R ++
Sbjct: 264 AGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDM-- 321
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
+ A + SK Y M Y E G + + M+ GV++ + I G
Sbjct: 322 -KSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISG 380
Query: 341 VVHEFVAGD 349
V F+ D
Sbjct: 381 HVDNFMFDD 389
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 138/317 (43%), Gaps = 49/317 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ +Y CG+ + A +F K ++ A++N MI + G VG A++LF M Q V
Sbjct: 311 LVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERD 370
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
SW +I G M ++AL +F ++ +G +P+ T+ ++L A + + GK +H
Sbjct: 371 RISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHS 430
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
A G N +V AL++MY KC + F+ + ER +W+++I G+A
Sbjct: 431 IAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGK 490
Query: 178 XXXXXXXMIRVGMKPNYVTF----------------------------------IG-VLH 202
M G +PN T+ +G +L
Sbjct: 491 IRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILA 550
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVE---HYGC-LVDLLSRAGRLEEAREVIANMSV 258
ACS + + +G+ + Y I G + H G LVD+ ++ G ++ +V +S
Sbjct: 551 ACSKLATIHRGKQV-----HAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS- 604
Query: 259 PPNRVVWGALLGGCRLH 275
PN V A+L +H
Sbjct: 605 NPNLVCHNAMLTAYAMH 621
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 157/334 (47%), Gaps = 11/334 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM----PQRN 57
L+ +Y CG A+ + + M Q+D +WN +I + G V A DL +M + N
Sbjct: 175 LIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPN 234
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V +W++VI G + E++++F+ M G P+ T+ +VL AC+++ L GK +H
Sbjct: 235 VVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHG 294
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ + N +V NAL+ MY +CG ++ +++F + S+++MIVG+ +
Sbjct: 295 YIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGK 354
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M + G++ + +++ ++ + D L + + GI P G ++
Sbjct: 355 AKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLME-GIEPDSFTLGSIL 413
Query: 238 DLLSRAGRLEEAREV--IANM-SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
+ + + +E+ IA + + N V GAL+ +I+ A+ A +S+ D
Sbjct: 414 TGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERD-- 471
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
+ + + YA + ++ + MKS G +
Sbjct: 472 -TSTWNALISGYARCNQIGKIRELVERMKSDGFE 504
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI-V 167
L GK +H + GF + +V L+ MY E+ + +F+ M + + SW++++ +
Sbjct: 47 LTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRL 106
Query: 168 GFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
M + +G K ++ F VL+ C +G ++ GR + ++ + +G
Sbjct: 107 HLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLK-HGF 165
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
V V L+D+ + G L+EA++V+ M+ + V W +++ C
Sbjct: 166 VTNVYVGNALIDMYGKCGSLDEAKKVLEGMT-QKDCVSWNSIITAC 210
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 210/356 (58%), Gaps = 5/356 (1%)
Query: 15 ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMC 74
AR +FD+ R++ W +++ + G V ARD+F MP RN S+++++ G + G
Sbjct: 139 ARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFF 198
Query: 75 EEALKVFSEMEKDGS-----KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
E +++F E++K K N +V+VL AC +G E GK +H + + NG ++
Sbjct: 199 SEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLE 258
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ ALID Y+KCG ++ +VF M + V +WS+MI+G A++ M +VG
Sbjct: 259 LGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVG 318
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
KPN VTF+GVL AC+H L + L IM Y I P +EHYGC+VD+L+R+G++++A
Sbjct: 319 PKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKA 378
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEA 309
I +M + P+ +WG+LL GC +H + L ++ ++L + + + G YV+++N+YA
Sbjct: 379 LTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPKHSGRYVLLANMYANM 438
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
GKWE VS +R+LMK RGV G S I ID +H+F A D+ ++ I+++ L
Sbjct: 439 GKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFADDKCCLYSREIYDVLSHL 494
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 35/279 (12%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A LF+ +P N+ + S+I + VF++M +PN T ++ AC
Sbjct: 41 AETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVS 100
Query: 106 LGDLE--------FGKS---------VHRFAKGNGFL-----------RNVYVCNALIDM 137
L LE G S ++ F+K + RNV +L+
Sbjct: 101 LSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSG 160
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR-----VGMKP 192
Y CG + E VF+ M R S+S+M+ G+ + + + +K
Sbjct: 161 YCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKF 220
Query: 193 NYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV 252
N + VL+AC+ VG ++G+ + + + + G+ +E L+D + G ++ A +V
Sbjct: 221 NGALLVSVLNACTMVGAFEEGKWIHSYVEEN-GLEYDLELGTALIDFYMKCGWVKGAEKV 279
Query: 253 IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
M V + W A++ G ++ N +A E + K+
Sbjct: 280 FNKMPV-KDVATWSAMILGLAINGNNKMALELFEKMEKV 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 93/232 (40%), Gaps = 14/232 (6%)
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKC--GCLEEGYRVFEGMRERTVVSWSSMIVGFA 170
K +H A N R Y+ + ++ + G +F + + ++S+I +
Sbjct: 5 KQIHAHAITNNLTRFSYISSRILAFFALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYT 64
Query: 171 MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV 230
+ M+ ++PN TF ++ AC + +++ + + G V
Sbjct: 65 TNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQ----VFTLSMKLGNSSDV 120
Query: 231 EHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
+++ S+ + AR+V S N V W +L+ G + + L EA K
Sbjct: 121 YFVSSVINAFSKHSAIHLARQVFDECS-NRNVVCWTSLVSG---YCSCGLVNEARDVFDK 176
Query: 291 LDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
+ L N+ Y M + Y G + E ++ R +K KK GC+ + +G +
Sbjct: 177 MPLRNEASYSAMVSGYVRNGFFSEGVQLFRELK----KKDKGCACLKFNGAL 224
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 209/382 (54%), Gaps = 33/382 (8%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM------------ 53
YA CG+ AR +FD M RD+A +N+MI + +G + ARDLF M
Sbjct: 199 YARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMV 258
Query: 54 -------------------PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKD-GSKPNE 93
P++NV SW ++I G + G +ALK+F EM + + NE
Sbjct: 259 HGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNE 318
Query: 94 VTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG 153
VTVV+VL A A L L+ G VH F + N +V+VCNAL+DMY KCG + + VFE
Sbjct: 319 VTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEE 378
Query: 154 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
M E+ SW+++I G+ ++ M+R G +PN +T VL AC+H GLV++G
Sbjct: 379 MTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEG 438
Query: 214 RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCR 273
R M R +GIVP +EHYGC++DLL RAGRL+EA ++I M PN ++ + L C
Sbjct: 439 RRCFEAMER-FGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACC 497
Query: 274 LHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGC 333
+++ AE ++ K++ G YV++ N+YA +W +V ++ +MK RG K
Sbjct: 498 YFEDVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEVAW 557
Query: 334 SSITIDGVVHEFVAGDETHPQA 355
S I +DG EFVAG +H +
Sbjct: 558 SVIEVDGRFREFVAGYYSHSHS 579
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ ++ + G VG AR +F M R++ SWT+VI G A+CG EA K+F
Sbjct: 157 DLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLF---- 212
Query: 86 KDGSKPNEVTVVAVLV-ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
DG +V V++ ++G ++ + + F K ++NV +++ Y + G +
Sbjct: 213 -DGMVDRDVAAFNVMIDGYVKMGRMDLARDL--FDKMR--VKNVISWTSMVHGYSEDGDV 267
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHA 203
+E +F+ M E+ V+SW++MI G+ + M V ++ N VT + VL A
Sbjct: 268 DEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPA 327
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREVIANMSVPPNR 262
+ + +D G + ++R+ + G H LVD+ ++ G + +A+ V M+ +
Sbjct: 328 VADLSALDLGGWVHGFVQRNQ--LDGSVHVCNALVDMYAKCGEIGKAKLVFEEMT-EKDT 384
Query: 263 VVWGALLGG 271
W AL+ G
Sbjct: 385 GSWNALING 393
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 13/235 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSW--TSVIYGLAKCGMCEEALKVFSEMEKD-GSKPNEVTV 96
V V AR F+ P + ++I ++++ KD +P+ T
Sbjct: 67 VSIVQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTF 126
Query: 97 VAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
+L C+ G +H N F ++YV +L+DMYVK G + +VF+ M
Sbjct: 127 TLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSV 186
Query: 157 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
R++VSW+++IVG+A M+ + F ++ +G +D R L
Sbjct: 187 RSLVSWTAVIVGYARCGDMVEARKLFDGMV----DRDVAAFNVMIDGYVKMGRMDLARDL 242
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
MR V V + +V S G ++EAR + M N + W A++ G
Sbjct: 243 FDKMR-----VKNVISWTSMVHGYSEDGDVDEARFLFDCMP-EKNVLSWNAMIRG 291
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 204/369 (55%), Gaps = 35/369 (9%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G R AR +FD+M +RD+ +WN MIA ++VG + AA++LF +MP ++V SW +I
Sbjct: 196 YVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMI 255
Query: 66 YGLAKCGMCEEALKVFSEM-----------------------------------EKDGSK 90
G + G AL+ F++M E +
Sbjct: 256 DGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAM 315
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PNE T+V+VL ACA LG L G VH + K N +V + L+ MY KCG ++ V
Sbjct: 316 PNEATLVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDV 375
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F M +++VSW+SMI+G+ +H M + G KPN TFI VL ACSH G+V
Sbjct: 376 FVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMV 435
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+G +MRR Y I P VEHYGC+VDLL+RAG ++ + E+I +SV +WGALL
Sbjct: 436 MEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLS 495
Query: 271 GCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT 330
GCR H ++ LAE + L +L+ + Y+++S+VYA G+W++V R+R MK G++K
Sbjct: 496 GCRTHLDLELAENVAKRLVELEPQDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQKE 555
Query: 331 PGCSSITID 339
S + ++
Sbjct: 556 AASSLVHLE 564
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 208/364 (57%), Gaps = 2/364 (0%)
Query: 18 MFDKMPQ-RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEE 76
+ K P +++ N ++ + V A+ LF +P++++ SWTS+I GL + +E
Sbjct: 232 LVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQE 291
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
+L +F EM G +P+ V + +VL ACA LG L++G+ VH + + +V++ +LID
Sbjct: 292 SLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLID 351
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
MY KCGC+E ++F + + + +W++ I G A++ ++ G +PN +T
Sbjct: 352 MYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEIT 411
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRD-YGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
F+ V AC H GLVD+GR+ M Y + P +EHYGC+VDLL RA +EEA E+I
Sbjct: 412 FLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINK 471
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
M +PP+ + GALL + N+ L E ++ + + G YV++SN YA KW EV
Sbjct: 472 MPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEV 531
Query: 316 SRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
+RRLMK +G+ K PG S I +DG H+FV GD HPQ++ I + L + ++G+I
Sbjct: 532 RSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIHVLLNILANQTYLEGHI 591
Query: 376 PDTS 379
S
Sbjct: 592 DTLS 595
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 132/250 (52%), Gaps = 11/250 (4%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
VGA++ +F MP R+V SWT +I G K G+ +A+ +F M+ PN T V++L A
Sbjct: 161 VGASK-VFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMD---VAPNAATFVSILGA 216
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C +LG L GK +H + + V N L+DMYVKC + + R+F+ + E+ +VSW
Sbjct: 217 CGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSW 276
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+SMI G + M+ G +P+ V VL AC+ +GL+D GR + +
Sbjct: 277 TSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYI-- 334
Query: 223 DYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLA 281
D+ + H G L+D+ ++ G +E A+++ N+ N W A +GG ++ +
Sbjct: 335 DHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMF-NLLPSKNIRTWNAYIGGLAINGH---G 390
Query: 282 EEAMRHLSKL 291
+EA++ L
Sbjct: 391 QEALKQFGYL 400
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 122/290 (42%), Gaps = 37/290 (12%)
Query: 1 MLLHLYASCGETR-----HARLMFDKMPQRDIATW---NIMIAHLINVGY----VGAARD 48
+LL C + R HA+L+ + D+ N H+ ++ Y +
Sbjct: 11 VLLDFIQRCNDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCNFLKQFDW 70
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
FSS P +I G A++++ + +G P+ TV AVL +CA+
Sbjct: 71 SFSSFPCN------LIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSG 124
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
+ K +H A +++V N+ + +Y CG +VF+ M R VVSW+ +I G
Sbjct: 125 IAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISG 184
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ +R+ + PN TF+ +L AC +G ++ G+ + +G+V
Sbjct: 185 Y---MKAGLFNDAVALFLRMDVAPNAATFVSILGACGKLGCLNLGKGI-------HGLVS 234
Query: 229 GVEH------YGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
H L+D+ + + +A+ + +P +V W +++ G
Sbjct: 235 KYPHGKELVVSNTLMDMYVKCESVTDAKRLFD--EIPEKDIVSWTSMISG 282
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 204/360 (56%), Gaps = 5/360 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS- 60
+++ Y G+ A+ +FD +P R+ W MI+ ++ G V A +LF MP + S
Sbjct: 370 MINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKDSI 429
Query: 61 -WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH--R 117
WT +IYG + + EA+ +F+EM G+ P T + A + L+ G +H +
Sbjct: 430 AWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQ 489
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ +VY+ N+LI MY KCG +E+ YR+F M R +SW+SMI+G + H
Sbjct: 490 LKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANE 549
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M+ G+ P+ VTF+GVL AC+H G VDKG L ++M DY + PG+EHY ++
Sbjct: 550 ALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSII 609
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHK-NIVLAEEAMRHLSKLDLLND 296
++L RAGR+++A E + + V PN +WGAL+G C L K + +A A L +LD LN
Sbjct: 610 NILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELDPLNA 669
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
+V + N+YA + E + +RR M+ +GV+K PGCS I + G VH F +GD P A+
Sbjct: 670 PGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWILVKGKVHAFSSGDRLDPLAE 729
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 17/258 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L Y G TR A+ FD MP+R++ +W M++ +G++ AR +F MP+RNV SW
Sbjct: 109 MLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSW 168
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ GL + G EEA KVF D N V+ A++ + G ++ K + +
Sbjct: 169 NSMVVGLIRNGDLEEARKVFD----DTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIE- 223
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
RNV ++I Y + G + E +R+F+ M E+ VVSW++MI GFA +
Sbjct: 224 ---CRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLL 280
Query: 182 XXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC----- 235
M+ + KPN TF+ +++AC+ +G G+ L M + ++ Y C
Sbjct: 281 FLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRW---KLDDYDCRLGRS 337
Query: 236 LVDLLSRAGRLEEAREVI 253
LV + S G ++ AR V
Sbjct: 338 LVRMYSVCGLMDSARSVF 355
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G A+ +FD++ R++ TW MI+ VG V A LF MP++NV SWT++I
Sbjct: 206 YVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMI 265
Query: 66 YGLAKCGMCEEALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
G A G EAL +F +M +KPNE T V+++ ACA +G GK +H N +
Sbjct: 266 GGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRW 325
Query: 125 LRNVYVCN---ALIDMYVKCGCLEEGYRVFEG-MRERTVVSWSSMIVGF 169
+ Y C +L+ MY CG ++ VFEG M+ S++SMI G+
Sbjct: 326 KLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQSFNSMINGY 374
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 216/397 (54%), Gaps = 11/397 (2%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCGMC 74
++ FDK +I N ++ ++ A ++F + + N+ SW +++ +
Sbjct: 397 KIGFDK----EITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQE 452
Query: 75 EEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNAL 134
E +++ EM G+KP+ +T+ +L CA+L L G VH ++ +G + +V VCN L
Sbjct: 453 GETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGL 512
Query: 135 IDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNY 194
IDMY KCG L+ VF+ + +VSWSS+IVG+A M +G++PN
Sbjct: 513 IDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNE 572
Query: 195 VTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIA 254
VT++G L ACSH+GLV++G L M ++GI P EH+ C+VDLL+RAG L EA I
Sbjct: 573 VTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQ 632
Query: 255 NMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEE 314
+ + W LL C+ H N+ +AE ++ KLD N V++ N++A AG WEE
Sbjct: 633 KSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEE 692
Query: 315 VSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 374
V+++R+LMK GV+K PG S I + H F + D +HPQ I+ M E+L ++ GY
Sbjct: 693 VAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGY 752
Query: 375 IPDTSVVLLDLEDAKQK------EIFLYRHSEKLALV 405
P S + ++ K+ +I L H +K ++
Sbjct: 753 DPCQSCYIQNMYLKKKNYIEYDPKIVLMLHYKKFVMI 789
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 126/247 (51%), Gaps = 2/247 (0%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
+ + N +I+ N G + A ++F+ +P +++ SW ++I G + G EAL +F ++ +
Sbjct: 201 LTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLR 260
Query: 87 DGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G+ +PNE +V AC+ L +LE+GK VH G RNV+ +L DMY K G L
Sbjct: 261 QGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLP 320
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
F ++ +VSW+++I FA + MI +G+ P+ +T+I +L C
Sbjct: 321 SAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCG 380
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+++GR + + + + G + L+ + ++ L +A V ++S N V W
Sbjct: 381 SPVRLNQGRQIHSYIVK-IGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSW 439
Query: 266 GALLGGC 272
A+L C
Sbjct: 440 NAILSAC 446
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 10/275 (3%)
Query: 5 LYASCGETR---HARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRN 57
L +C R +A+ + D + + + I+ H+IN+ G + AR +F +M N
Sbjct: 71 LVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPN 130
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
V SWTS+I G ++ G +A+ ++ +M + G P+++T +V+ AC GD++ G+ +H
Sbjct: 131 VVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHA 190
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
+ F ++ NALI MY G +E VF + + ++SW +MI G+
Sbjct: 191 HVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVE 250
Query: 178 XXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
++R G +PN F V ACS + ++ G+ + + + +G+ V L
Sbjct: 251 ALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVK-FGLRRNVFAGCSL 309
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
D+ ++ G L A+ + P+ V W A++
Sbjct: 310 CDMYAKFGFLPSAKMAFCQIK-NPDIVSWNAIIAA 343
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 62 TSVIYGLAKCGMCEEALKVFS-EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
S I L K +EAL+ F ++ S T ++++ACA L++ K +H
Sbjct: 33 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVL 92
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ + ++ + N +I+MY KCG +++ +VF+ M+ VVSW+SMI G++ +
Sbjct: 93 KSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAII 152
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDL 239
M R G P+ +TF V+ AC G +D GR L +++ +G + L+ +
Sbjct: 153 MYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFG--HHLTSQNALISM 210
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ G++E A V + + + WG ++ G
Sbjct: 211 YTNFGQIEHASNVFTRIPT-KDLISWGTMITG 241
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 203/339 (59%), Gaps = 1/339 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ A +F + RDI ++N+MI + + AR+LF MPQRN +W
Sbjct: 154 LIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTW 213
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G ++ +C EA+++F+EM P+ + +V+VL ACAQLG+LE G+ VH +
Sbjct: 214 GTMIAGYSQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYITR 273
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
NG + Y+ L+D+Y KCGC+E FE + V +W++M+VGFA+H
Sbjct: 274 NGIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEY 333
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ G+KP+ VTF+GVL CSH GLV + R + M YG+ +HYGC+ D+L+
Sbjct: 334 FSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKHYGCMADMLA 393
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG +EE+RE+I M + WG LLGGCR+H N+ +A++A + + ++ + G Y V
Sbjct: 394 RAGLIEESRELIKGMPNGGDVFAWGGLLGGCRIHGNVEIAKQAAQQVMEIKPEDGGVYSV 453
Query: 302 MSNVYAEAGKWEEVSRIRR-LMKSRGVKKTPGCSSITID 339
M+N+YA +W+++ +IR+ L +R KK G S I ++
Sbjct: 454 MANIYANTEQWDDLVKIRKSLGANRRAKKITGTSLIRLN 492
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 202/354 (57%), Gaps = 2/354 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA GE AR +F+ MP+R+ W+ M+ G V A +F +P RN+ W S+I
Sbjct: 191 YAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMI 250
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G + G E+AL+ F EM DG +P+E TVV+VL ACAQLGDL+ GK +H + G
Sbjct: 251 AGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIA 310
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
N +V + LIDMY KCG L VFE ER V W++MI GFA++ M
Sbjct: 311 VNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRM 370
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
++ + VTFI VL AC+H GL+ + +++ M +YGI G+ HYGC+VDLL RAG+
Sbjct: 371 QESNIRLDAVTFITVLSACAHGGLMSEALEVISKM-EEYGIEMGIRHYGCMVDLLGRAGK 429
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL-SKLDLLNDGYYVVMSN 304
L+EA E+I M + PN V GA++G C +H ++ +AE+ M+ + + + + V++SN
Sbjct: 430 LKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMKMIGADSAACVNSHNVLLSN 489
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
+YA + KWE+ IR M G +K PG SSI + + E Q G+
Sbjct: 490 IYAASEKWEKAEMIRSSMVDGGSEKIPGYSSIILSNSAVDLSISKEISRQMNGL 543
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 10/271 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ YA CG AR +FD MP+R++ TWN MI + G +A F MP + SW
Sbjct: 92 IVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSW 151
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV-ACAQLGDLEFGKSVHRFAK 120
+ +I G A+ G A K F +K + +V + V+V A+ G++E + V
Sbjct: 152 SQMIGGFARNGDTLTARKFF---DKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELMP 208
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
RN +V ++++ Y K G + E +F + R + W+SMI G+ +
Sbjct: 209 E----RNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALE 264
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G +P+ T + VL AC+ +G +D G+ + ++ GI L+D+
Sbjct: 265 AFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECK-GIAVNQFVLSGLIDMY 323
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ G L AR V + + N W A++ G
Sbjct: 324 AKCGDLVNARLVFESCN-ERNVFCWNAMIAG 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ +YA CG+ +ARL+F+ +R++ WN MIA G + M + N+R
Sbjct: 319 LIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLD 378
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
++ +V+ A G+ EAL+V S+ME+ G
Sbjct: 379 AVTFITVLSACAHGGLMSEALEVISKMEEYG 409
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 196/339 (57%), Gaps = 6/339 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR F + Q +V WTS+I G + G E L ++ +M+ + PNE+T+ +VL
Sbjct: 369 GSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVL 428
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
AC+ L L+ GK +H GF V + +AL MY KCG L++GY +F M R V+
Sbjct: 429 RACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVI 488
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
SW++MI G + + M+ G+KP+ VTF+ +L ACSH+GLVD+G +M
Sbjct: 489 SWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMM 548
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
++ I P VEHY C+VD+LSRAG+L EA+E I + +V +W LLG C+ H+N L
Sbjct: 549 FDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYEL 608
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
A L +L YV++S++Y G E V R+RR+MK+RGV K PGCS I + G
Sbjct: 609 GVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKG 668
Query: 341 VVHEFVAGDETHPQAKGI---FEMWEKLLVKMKMKGYIP 376
+VH FV GD HPQ I E+ KL++ +GY P
Sbjct: 669 LVHVFVVGDNQHPQVDEIRLELELLTKLMID---EGYQP 704
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 124/234 (52%), Gaps = 6/234 (2%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G+V AR LF MP+RN SW ++I G A + ++A++VF M ++ NE + +V
Sbjct: 166 TGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSV 225
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L A + G+ VH A NG L V V NAL+ MY KCG L++ R FE ++
Sbjct: 226 LSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNS 285
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++WS+M+ G+A M G+ P+ T +GV++ACS + V +G+ + +
Sbjct: 286 ITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSF 345
Query: 220 MRRDYGIVPGVEHY--GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + G++ Y +VD+ ++ G L +AR+ + P+ V+W +++ G
Sbjct: 346 A---FKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQ-QPDVVLWTSIITG 395
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 126/247 (51%), Gaps = 6/247 (2%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
++ N ++ G + A F +N +W++++ G A+ G ++ALK+F++M
Sbjct: 254 VSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHS 313
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
G P+E T+V V+ AC+ L + GK +H FA GF +YV +A++DMY KCG L +
Sbjct: 314 SGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLAD 373
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+ FE +++ VV W+S+I G+ + M + PN +T VL ACS
Sbjct: 374 ARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSS 433
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VV 264
+ +D+G+ + + + YG V L + ++ G L++ + M P+R +
Sbjct: 434 LAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRM---PSRDVIS 489
Query: 265 WGALLGG 271
W A++ G
Sbjct: 490 WNAMISG 496
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 9/268 (3%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ--RNVRSWTSVIYG 67
G T HAR++ I N + ++ A LF S+ ++ SW S+I
Sbjct: 30 GRTLHARIL-KTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINA 88
Query: 68 LAKCGMCEE---ALKVFSEMEK-DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
++ A+ +F M + + PN T+ V A + L D+ GK H A G
Sbjct: 89 FSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTG 148
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
+VYV ++L++MY K G + + ++F+ M ER VSW++MI G+A
Sbjct: 149 CSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFE 208
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M R N VL A + V GR + ++ ++ G++ V LV + ++
Sbjct: 209 LMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKN-GLLAIVSVANALVTMYAKC 267
Query: 244 GRLEEAREVIANMSVPPNRVVWGALLGG 271
G L++A S N + W A++ G
Sbjct: 268 GSLDDAVRTF-EFSGDKNSITWSAMVTG 294
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/351 (37%), Positives = 198/351 (56%), Gaps = 1/351 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ + ++ N G + A +F +M ++ W S+I G G + A F E+
Sbjct: 373 DVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIW 432
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+PN +T+V+VL C Q+G L GK +H +A +G N+ V N+LIDMY KCG LE
Sbjct: 433 VAEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLE 492
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
G +VF M + +++++MI H M GMKPN VTFI +L ACS
Sbjct: 493 LGVKVFNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACS 552
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
H GLVD+G L M DYGI P +EHY C+VDL+ R G L+ A + I M V P+ V
Sbjct: 553 HAGLVDRGWLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTPDANVL 612
Query: 266 GALLGGCRLHKNIVLAEE-AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
G+LLG CRLH + LA++ H+ +L+ + G+YV++SN+YA +WE++S++R L+K
Sbjct: 613 GSLLGACRLHNKVELADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIKD 672
Query: 325 RGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
+G++K PG S I + + F A +P+ I E + L + MK + YI
Sbjct: 673 KGLEKKPGSSWIQVGHSIFVFHATSIFYPELAKIEETLDSLFLVMKNEDYI 723
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I GY A +FS M R++ SW+++I G ++ GM +E+ +++ M
Sbjct: 272 DLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMV 331
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G NE+ V VL A +L + GK +H F G L +V V +AL+DMY CG ++
Sbjct: 332 NMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIK 391
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
E +F M + ++ W+S+I G+ + + +PN++T + VL C+
Sbjct: 392 EAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICT 451
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+G + +G+ + R G+ + L+D+ S+ G LE +V M V N + +
Sbjct: 452 QIGALRQGKEIHCYATRS-GLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMV-KNTITY 509
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLD 292
++ C H L E+ ++ +++
Sbjct: 510 NTMISACGAHG---LGEKGLKFYEQMN 533
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 124/230 (53%), Gaps = 3/230 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F M R++ +WT++I G G +EA+ +F +M +G K + V V +VL C +
Sbjct: 190 ARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGR 249
Query: 106 LGD-LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
L + L+ G ++H A +GF ++YV NA+IDMY KCG +E VF M R +VSWS+
Sbjct: 250 LMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWST 309
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
+I G++ + M+ +G+ N + VL A + L +G+ + + +
Sbjct: 310 LIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQ- 368
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRL 274
G++ V LVD+ + G ++EA + NM + + +VW +L+ G L
Sbjct: 369 GLLTDVVVGSALVDMYANCGSIKEAESIFRNM-LDMDIMVWNSLIAGYNL 417
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 13/240 (5%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+N G A FS +P ++ +W +++ L +++ + M + G P+ T
Sbjct: 81 VNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPDNYTYP 140
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
VL AC+ L +E G+ V+ N N++V ALIDM+VKC LE+ +VF+ M R
Sbjct: 141 LVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFDEMNVR 200
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH------VGLVD 211
+ +W+++I G + M G+K + V VL C +G+
Sbjct: 201 DLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAM 260
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
G AL + D + + +D+ + G +EA V + M V + V W L+ G
Sbjct: 261 HGCALRSGFDSDLYVSNAI------IDMYCKCGYPDEACLVFSYM-VFRDIVSWSTLIAG 313
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 208/375 (55%), Gaps = 7/375 (1%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G A +F++MP+RD+ +WN M+ I G + A LF +MP++NV +WT+++
Sbjct: 198 YAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMM 257
Query: 66 YGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
G + G+ EEALK+F++M+ DG KP T V VL AC+ L L G+ +H+ F
Sbjct: 258 TGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVF 317
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFE-GMR-ERTVVSWSSMIVGFAMHXXXXXXXXXX 182
+ YV +ALI+MY KCG ++F+ G+ +++W+ MI +A H
Sbjct: 318 QESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILF 377
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M +G + N VT++G+L ACSH GL D+G + ++ + +HY CL+DL R
Sbjct: 378 NKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGR 437
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVM 302
AGRL+EA +I + + VWGALL GC +H N + + K++ N Y++
Sbjct: 438 AGRLDEALNIIEGLGKEVSLSVWGALLAGCSVHGNADIGRLVADKVLKMEPENADTYLLA 497
Query: 303 SNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMW 362
SN+YA G EE + +R MK +G+KK PGCS I + V FV D++H Q FEM
Sbjct: 498 SNMYASVGMREEAANVRMKMKDKGLKKQPGCSWIDVGNTVQVFVVNDKSHSQ----FEML 553
Query: 363 EKLLVKMKMKGYIPD 377
+ L K K+ PD
Sbjct: 554 KISLWKAKVVAKWPD 568
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 14/248 (5%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y A +F++MP R++ +WN MI G A DLF MP+RNV SW +V+
Sbjct: 74 YIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNVVSWNTVM 133
Query: 66 YGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
LA CG ++A ++F+EM E+D V+ ++ ++ G ++ + V
Sbjct: 134 TALAHCGRIDDAERLFNEMRERD-----VVSWTTMVAGLSKNGRVDDARDVFDRMP---- 184
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+RNV NA+I Y + G +E ++FE M ER + SW++M+ GF +
Sbjct: 185 IRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHA 244
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M K N +T+ ++ GL ++ L M+ + G+ P + ++ S
Sbjct: 245 MP----KKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLA 300
Query: 245 RLEEAREV 252
L E +++
Sbjct: 301 GLPEGQQI 308
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 136/291 (46%), Gaps = 27/291 (9%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM-PQRNVRSWTSVIYGL 68
G+ AR +FD+M +RD W MI+ I G + AR LF + +++V WT+++ G
Sbjct: 15 GQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSVIVWTAMVSGY 74
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
K EEA ++F+EM N V+ ++ A+ G + +++ F G RNV
Sbjct: 75 IKINRIEEAERLFNEM----PVRNVVSWNTMIDGYARNGRTQ--EAMDLF--GRMPERNV 126
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IR 187
N ++ CG +++ R+F MRER VVSW++M+ G + + M IR
Sbjct: 127 VSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIR 186
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM-RRDYGIVPGVEHYGCLVDLLSRAGRL 246
N V++ ++ + G D+ L M RD + + +V + G L
Sbjct: 187 -----NVVSWNAMIAGYAQNGRFDEALKLFERMPERD------MPSWNTMVTGFIQNGDL 235
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
A ++ M N + W A++ G H L+EEA++ +K+ NDG
Sbjct: 236 NRAEKLFHAMP-KKNVITWTAMMTGYVQHG---LSEEALKLFNKMQ-ANDG 281
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 54/244 (22%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N I+ L G + AR +F M +R+ WT++I G KCG+ EA K+F ++ + S
Sbjct: 5 NYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKS- 63
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
V V A++ Y+K +EE R+
Sbjct: 64 -------------------------------------VIVWTAMVSGYIKINRIEEAERL 86
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKP--NYVTFIGVLHACSHVG 208
F M R VVSW++MI G+A + M G P N V++ V+ A +H G
Sbjct: 87 FNEMPVRNVVSWNTMIDGYARN------GRTQEAMDLFGRMPERNVVSWNTVMTALAHCG 140
Query: 209 LVDKGRALLTIMR-RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGA 267
+D L MR RD V + +V LS+ GR+++AR+V M + N V W A
Sbjct: 141 RIDDAERLFNEMRERD------VVSWTTMVAGLSKNGRVDDARDVFDRMPI-RNVVSWNA 193
Query: 268 LLGG 271
++ G
Sbjct: 194 MIAG 197
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 192/336 (57%), Gaps = 1/336 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A DLF+ MP+++V +W + G A GM E++ VF M G++P+ + +V +L ++
Sbjct: 364 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISE 423
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L+ +H F NGF N ++ +LI++Y KC +E+ +VF+GM + VV+WSS+
Sbjct: 424 LGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 483
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I + H M KPN VTFI +L ACSH GL+ +G + IM Y
Sbjct: 484 IAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 543
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ P EHY +VDLL R G L+ A +VI NM + +WGALLG CR+H+NI + E A
Sbjct: 544 KLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 603
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L LD + GYY+++SN+Y+ W +++RRL+K + + K G S + + V
Sbjct: 604 AKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 663
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
F+AGD H ++ I+E+ KL KM+ + P +
Sbjct: 664 FIAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 699
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAV 99
G + A +F P+ +V WTS+I G + G E AL FS M + P+ VT+V+V
Sbjct: 156 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 215
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACAQL + + G+SVH F K G + + N+L+ +Y K G ++ +F M ++ +
Sbjct: 216 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 275
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SWS+M+ +A + M+ +KPN+VT + VL AC+ + +++G +
Sbjct: 276 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE- 334
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
+ +YG L+D+ + E+A ++ M P V+ W L G
Sbjct: 335 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM--PKKDVIAWAVLFSG 385
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 13/251 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + A +LF M +++ SW++++ A G + L +F+EM KPN VTVV+V
Sbjct: 257 TGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSV 316
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + +LE G +H A GF V AL+DMY+KC E+ +F M ++ V
Sbjct: 317 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDV 376
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++W+ + G+A + M+ G +P+ + + +L S +G++ + L
Sbjct: 377 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCL--- 433
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ I G E+ L+++ ++ +E+A +V M+ + V W +++ H
Sbjct: 434 --HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGFH 490
Query: 276 KNIVLAEEAMR 286
EEA++
Sbjct: 491 GQ---GEEALK 498
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-----KPNEVTVVAVL 100
A LF P R V W +++ G E L +F +M S +P+ +V L
Sbjct: 55 AHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIAL 114
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+CA L L GK +H F K +++V +ALID+Y KCG + + +VF + VV
Sbjct: 115 KSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVV 174
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
W+S+I G+ M + + P+ VT + V AC+ + GR++
Sbjct: 175 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 220 MRRDYGIVPGVEHYGCLVD----LLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
++R G+++ CL + L + G ++ A + MS + + W ++
Sbjct: 235 VKR-----KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS-DKDIISWSTMVA 283
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 192/336 (57%), Gaps = 1/336 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A DLF+ MP+++V +W + G A GM E++ VF M G++P+ + +V +L ++
Sbjct: 364 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISE 423
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L+ +H F NGF N ++ +LI++Y KC +E+ +VF+GM + VV+WSS+
Sbjct: 424 LGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 483
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I + H M KPN VTFI +L ACSH GL+ +G + IM Y
Sbjct: 484 IAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 543
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ P EHY +VDLL R G L+ A +VI NM + +WGALLG CR+H+NI + E A
Sbjct: 544 KLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 603
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L LD + GYY+++SN+Y+ W +++RRL+K + + K G S + + V
Sbjct: 604 AKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 663
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
F+AGD H ++ I+E+ KL KM+ + P +
Sbjct: 664 FIAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 699
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAV 99
G + A +F P+ +V WTS+I G + G E AL FS M + P+ VT+V+V
Sbjct: 156 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 215
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACAQL + + G+SVH F K G + + N+L+ +Y K G ++ +F M ++ +
Sbjct: 216 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 275
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SWS+M+ +A + M+ +KPN+VT + VL AC+ + +++G +
Sbjct: 276 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE- 334
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
+ +YG L+D+ + E+A ++ M P V+ W L G
Sbjct: 335 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM--PKKDVIAWAVLFSG 385
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 13/251 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + A +LF M +++ SW++++ A G + L +F+EM KPN VTVV+V
Sbjct: 257 TGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSV 316
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + +LE G +H A GF V AL+DMY+KC E+ +F M ++ V
Sbjct: 317 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDV 376
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++W+ + G+A + M+ G +P+ + + +L S +G++ + L
Sbjct: 377 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCL--- 433
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ I G E+ L+++ ++ +E+A +V M+ + V W +++ H
Sbjct: 434 --HAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGFH 490
Query: 276 KNIVLAEEAMR 286
EEA++
Sbjct: 491 GQ---GEEALK 498
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 16/235 (6%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-----KPNEVTVVAVL 100
A LF P R V W +++ G E L +F +M S +P+ +V L
Sbjct: 55 AHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIAL 114
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+CA L L GK +H F K +++V +ALID+Y KCG + + +VF + VV
Sbjct: 115 KSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVV 174
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
W+S+I G+ M + + P+ VT + V AC+ + GR++
Sbjct: 175 LWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 220 MRRDYGIVPGVEHYGCLVD----LLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
++R G+++ CL + L + G ++ A + MS + + W ++
Sbjct: 235 VKR-----KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS-DKDIISWSTMVA 283
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 199/332 (59%), Gaps = 2/332 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G+ A +F +MP D+ +WN +I+ +G + ++ F +MP +N+ SW SVI
Sbjct: 318 YVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVI 377
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G K + A+++FS+M+ G +P+ T+ ++L L DL GK +H+F +
Sbjct: 378 AGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VV 436
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
++ + N+LI MY +CG + + VF M+ + V++W++MI G+A H
Sbjct: 437 PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFER 496
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M + ++P Y+TFI VL+AC+H GLV++G+ M DYGI P VEH+ LVD+L R G
Sbjct: 497 MKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQG 556
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+L+EA ++I NM V P++ VWGALLG CR+H N+ LA+ A + L +L+ + Y ++ N
Sbjct: 557 QLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFN 616
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+YA+ G+W++ R+R LM+ VKK G S I
Sbjct: 617 LYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 63/315 (20%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLIN---VGYVGAARDLFSSMPQRNVRSWT 62
Y E AR +FD+MP RDI +WN++I+ + +V R LF MPQR+ SW
Sbjct: 79 YVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWN 138
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE-----FGKSVHR 117
+VI G AK G ++A+++F M + N V+ AV+ GD++ F K R
Sbjct: 139 TVISGYAKNGRMDQAIEIFESM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 194
Query: 118 FAKG-----NGFLRN-----------------------VYVCNALIDMYVKCGCLEEGYR 149
+ +G +RN VY N LI Y + G +EE
Sbjct: 195 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARH 254
Query: 150 VFEGMR-------------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
VF+G+ +R VVSW+SM++ + M+ + + +
Sbjct: 255 VFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV----ERDACS 310
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ V+ +G +++ L M +P V + ++ S+ G L+ +E NM
Sbjct: 311 WNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365
Query: 257 SVPPNRVVWGALLGG 271
N + W +++ G
Sbjct: 366 P-HKNLISWNSVIAG 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 167/411 (40%), Gaps = 50/411 (12%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G AR +FD R+ TWN MI + + AR LF MP R++ SW +I G
Sbjct: 51 TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110
Query: 69 AKC---GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
C EE K+F M + V+ V+ A+ G ++ +++ F
Sbjct: 111 FSCRGSRFVEEGRKLFDIMPQRDC----VSWNTVISGYAKNGRMD--QAIEIFESMPE-- 162
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
RNV CNA+++ ++ G ++ F M ER S S ++ G +
Sbjct: 163 RNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEY 222
Query: 186 IRVGMKPNYVTFI--GVLHACSHVGLVDKGRALLTIMRRDYG--------IVPGVEHYGC 235
G + + + + ++ G+V++ R + + D G + V +
Sbjct: 223 GNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNS 282
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
++ +AG + ARE+ M V + W ++GG + I EEA + ++ + +
Sbjct: 283 MMMCYVKAGDVVSARELFDRM-VERDACSWNTVIGG---YVQIGDMEEASKLFLEMPIPD 338
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
+ + + +++ G ++ R++ ++ K +S+ +AG E +
Sbjct: 339 VLSWNSIISGFSQIG---DLKRVKEFFENMPHKNLISWNSV---------IAGYEKNEDY 386
Query: 356 KGIFEMWEKLLVKMKMKGYIPD---------TSVVLLDLEDAKQKEIFLYR 397
KG E L +M++KG PD S L+DL KQ F+ +
Sbjct: 387 KGAIE----LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK 433
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 199/332 (59%), Gaps = 2/332 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G+ A +F +MP D+ +WN +I+ +G + ++ F +MP +N+ SW SVI
Sbjct: 318 YVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVI 377
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G K + A+++FS+M+ G +P+ T+ ++L L DL GK +H+F +
Sbjct: 378 AGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VV 436
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
++ + N+LI MY +CG + + VF M+ + V++W++MI G+A H
Sbjct: 437 PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFER 496
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M + ++P Y+TFI VL+AC+H GLV++G+ M DYGI P VEH+ LVD+L R G
Sbjct: 497 MKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQG 556
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+L+EA ++I NM V P++ VWGALLG CR+H N+ LA+ A + L +L+ + Y ++ N
Sbjct: 557 QLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFN 616
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+YA+ G+W++ R+R LM+ VKK G S I
Sbjct: 617 LYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 63/315 (20%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLIN---VGYVGAARDLFSSMPQRNVRSWT 62
Y E AR +FD+MP RDI +WN++I+ + +V R LF MPQR+ SW
Sbjct: 79 YVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWN 138
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE-----FGKSVHR 117
+VI G AK G ++A+++F M + N V+ AV+ GD++ F K R
Sbjct: 139 TVISGYAKNGRMDQAIEIFESM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 194
Query: 118 FAKG-----NGFLRN-----------------------VYVCNALIDMYVKCGCLEEGYR 149
+ +G +RN VY N LI Y + G +EE
Sbjct: 195 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARH 254
Query: 150 VFEGMR-------------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
VF+G+ +R VVSW+SM++ + M+ + + +
Sbjct: 255 VFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV----ERDACS 310
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ V+ +G +++ L M +P V + ++ S+ G L+ +E NM
Sbjct: 311 WNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365
Query: 257 SVPPNRVVWGALLGG 271
N + W +++ G
Sbjct: 366 P-HKNLISWNSVIAG 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 167/411 (40%), Gaps = 50/411 (12%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G AR +FD R+ TWN MI + + AR LF MP R++ SW +I G
Sbjct: 51 TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110
Query: 69 AKC---GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
C EE K+F M + V+ V+ A+ G ++ +++ F
Sbjct: 111 FSCRGSRFVEEGRKLFDIMPQRDC----VSWNTVISGYAKNGRMD--QAIEIFESMPE-- 162
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
RNV CNA+++ ++ G ++ F M ER S S ++ G +
Sbjct: 163 RNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEY 222
Query: 186 IRVGMKPNYVTFI--GVLHACSHVGLVDKGRALLTIMRRDYG--------IVPGVEHYGC 235
G + + + + ++ G+V++ R + + D G + V +
Sbjct: 223 GNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNS 282
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
++ +AG + ARE+ M V + W ++GG + I EEA + ++ + +
Sbjct: 283 MMMCYVKAGDVVSARELFDRM-VERDACSWNTVIGG---YVQIGDMEEASKLFLEMPIPD 338
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
+ + + +++ G ++ R++ ++ K +S+ +AG E +
Sbjct: 339 VLSWNSIISGFSQIG---DLKRVKEFFENMPHKNLISWNSV---------IAGYEKNEDY 386
Query: 356 KGIFEMWEKLLVKMKMKGYIPD---------TSVVLLDLEDAKQKEIFLYR 397
KG E L +M++KG PD S L+DL KQ F+ +
Sbjct: 387 KGAIE----LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK 433
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 199/332 (59%), Gaps = 2/332 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G+ A +F +MP D+ +WN +I+ +G + ++ F +MP +N+ SW SVI
Sbjct: 318 YVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVI 377
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G K + A+++FS+M+ G +P+ T+ ++L L DL GK +H+F +
Sbjct: 378 AGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VV 436
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
++ + N+LI MY +CG + + VF M+ + V++W++MI G+A H
Sbjct: 437 PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFER 496
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M + ++P Y+TFI VL+AC+H GLV++G+ M DYGI P VEH+ LVD+L R G
Sbjct: 497 MKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQG 556
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+L+EA ++I NM V P++ VWGALLG CR+H N+ LA+ A + L +L+ + Y ++ N
Sbjct: 557 QLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFN 616
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+YA+ G+W++ R+R LM+ VKK G S I
Sbjct: 617 LYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 63/315 (20%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLIN---VGYVGAARDLFSSMPQRNVRSWT 62
Y E AR +FD+MP RDI +WN++I+ + +V R LF MPQR+ SW
Sbjct: 79 YVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWN 138
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE-----FGKSVHR 117
+VI G AK G ++A+++F M + N V+ AV+ GD++ F K R
Sbjct: 139 TVISGYAKNGRMDQAIEIFESM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 194
Query: 118 FAKG-----NGFLRN-----------------------VYVCNALIDMYVKCGCLEEGYR 149
+ +G +RN VY N LI Y + G +EE
Sbjct: 195 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARH 254
Query: 150 VFEGMR-------------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
VF+G+ +R VVSW+SM++ + M+ + + +
Sbjct: 255 VFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV----ERDACS 310
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ V+ +G +++ L M +P V + ++ S+ G L+ +E NM
Sbjct: 311 WNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365
Query: 257 SVPPNRVVWGALLGG 271
N + W +++ G
Sbjct: 366 P-HKNLISWNSVIAG 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 167/411 (40%), Gaps = 50/411 (12%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G AR +FD R+ TWN MI + + AR LF MP R++ SW +I G
Sbjct: 51 TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110
Query: 69 AKC---GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
C EE K+F M + V+ V+ A+ G ++ +++ F
Sbjct: 111 FSCRGSRFVEEGRKLFDIMPQRDC----VSWNTVISGYAKNGRMD--QAIEIFESMPE-- 162
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
RNV CNA+++ ++ G ++ F M ER S S ++ G +
Sbjct: 163 RNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEY 222
Query: 186 IRVGMKPNYVTFI--GVLHACSHVGLVDKGRALLTIMRRDYG--------IVPGVEHYGC 235
G + + + + ++ G+V++ R + + D G + V +
Sbjct: 223 GNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNS 282
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
++ +AG + ARE+ M V + W ++GG + I EEA + ++ + +
Sbjct: 283 MMMCYVKAGDVVSARELFDRM-VERDACSWNTVIGG---YVQIGDMEEASKLFLEMPIPD 338
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
+ + + +++ G ++ R++ ++ K +S+ +AG E +
Sbjct: 339 VLSWNSIISGFSQIG---DLKRVKEFFENMPHKNLISWNSV---------IAGYEKNEDY 386
Query: 356 KGIFEMWEKLLVKMKMKGYIPD---------TSVVLLDLEDAKQKEIFLYR 397
KG E L +M++KG PD S L+DL KQ F+ +
Sbjct: 387 KGAIE----LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK 433
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/332 (37%), Positives = 199/332 (59%), Gaps = 2/332 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G+ A +F +MP D+ +WN +I+ +G + ++ F +MP +N+ SW SVI
Sbjct: 318 YVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVI 377
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G K + A+++FS+M+ G +P+ T+ ++L L DL GK +H+F +
Sbjct: 378 AGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VV 436
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
++ + N+LI MY +CG + + VF M+ + V++W++MI G+A H
Sbjct: 437 PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFER 496
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M + ++P Y+TFI VL+AC+H GLV++G+ M DYGI P VEH+ LVD+L R G
Sbjct: 497 MKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQG 556
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+L+EA ++I NM V P++ VWGALLG CR+H N+ LA+ A + L +L+ + Y ++ N
Sbjct: 557 QLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFN 616
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+YA+ G+W++ R+R LM+ VKK G S I
Sbjct: 617 LYADLGQWDDAERVRALMEENNVKKQAGYSWI 648
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 63/315 (20%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLIN---VGYVGAARDLFSSMPQRNVRSWT 62
Y E AR +FD+MP RDI +WN++I+ + +V R LF MPQR+ SW
Sbjct: 79 YVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWN 138
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE-----FGKSVHR 117
+VI G AK G ++A+++F M + N V+ AV+ GD++ F K R
Sbjct: 139 TVISGYAKNGRMDQAIEIFESM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 194
Query: 118 FAKG-----NGFLRN-----------------------VYVCNALIDMYVKCGCLEEGYR 149
+ +G +RN VY N LI Y + G +EE
Sbjct: 195 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARH 254
Query: 150 VFEGMR-------------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
VF+G+ +R VVSW+SM++ + M+ + + +
Sbjct: 255 VFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV----ERDACS 310
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ V+ +G +++ L M +P V + ++ S+ G L+ +E NM
Sbjct: 311 WNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 365
Query: 257 SVPPNRVVWGALLGG 271
N + W +++ G
Sbjct: 366 P-HKNLISWNSVIAG 379
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 167/411 (40%), Gaps = 50/411 (12%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G AR +FD R+ TWN MI + + AR LF MP R++ SW +I G
Sbjct: 51 TGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGY 110
Query: 69 AKC---GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
C EE K+F M + V+ V+ A+ G ++ +++ F
Sbjct: 111 FSCRGSRFVEEGRKLFDIMPQRDC----VSWNTVISGYAKNGRMD--QAIEIFESMPE-- 162
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
RNV CNA+++ ++ G ++ F M ER S S ++ G +
Sbjct: 163 RNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEY 222
Query: 186 IRVGMKPNYVTFI--GVLHACSHVGLVDKGRALLTIMRRDYG--------IVPGVEHYGC 235
G + + + + ++ G+V++ R + + D G + V +
Sbjct: 223 GNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNS 282
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
++ +AG + ARE+ M V + W ++GG + I EEA + ++ + +
Sbjct: 283 MMMCYVKAGDVVSARELFDRM-VERDACSWNTVIGG---YVQIGDMEEASKLFLEMPIPD 338
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
+ + + +++ G ++ R++ ++ K +S+ +AG E +
Sbjct: 339 VLSWNSIISGFSQIG---DLKRVKEFFENMPHKNLISWNSV---------IAGYEKNEDY 386
Query: 356 KGIFEMWEKLLVKMKMKGYIPD---------TSVVLLDLEDAKQKEIFLYR 397
KG E L +M++KG PD S L+DL KQ F+ +
Sbjct: 387 KGAIE----LFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTK 433
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 192/336 (57%), Gaps = 1/336 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A DLF+ MP+++V +W + G A GM E++ VF M G++P+ + +V +L ++
Sbjct: 334 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISE 393
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L+ +H F NGF N ++ +LI++Y KC +E+ +VF+GM + VV+WSS+
Sbjct: 394 LGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 453
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I + H M KPN VTFI +L ACSH GL+ +G + IM Y
Sbjct: 454 IAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 513
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ P EHY +VDLL R G L+ A +VI NM + +WGALLG CR+H+NI + E A
Sbjct: 514 KLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 573
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L LD + GYY+++SN+Y+ W +++RRL+K + + K G S + + V
Sbjct: 574 AKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 633
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
F+AGD H ++ I+E+ KL KM+ + P +
Sbjct: 634 FIAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 669
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAV 99
G + A +F P+ +V WTS+I G + G E AL FS M + P+ VT+V+V
Sbjct: 126 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 185
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACAQL + + G+SVH F K G + + N+L+ +Y K G ++ +F M ++ +
Sbjct: 186 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 245
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SWS+M+ +A + M+ +KPN+VT + VL AC+ + +++G +
Sbjct: 246 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE- 304
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
+ +YG L+D+ + E+A ++ M P V+ W L G
Sbjct: 305 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM--PKKDVIAWAVLFSG 355
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 13/251 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + A +LF M +++ SW++++ A G + L +F+EM KPN VTVV+V
Sbjct: 227 TGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSV 286
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + +LE G +H A GF V AL+DMY+KC E+ +F M ++ V
Sbjct: 287 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDV 346
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++W+ + G+A + M+ G +P+ + + +L S +G++ + L
Sbjct: 347 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAF 406
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ ++ G E+ L+++ ++ +E+A +V M+ + V W +++ H
Sbjct: 407 VIKN-----GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGFH 460
Query: 276 KNIVLAEEAMR 286
EEA++
Sbjct: 461 GQ---GEEALK 468
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 16/252 (6%)
Query: 29 TWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
+++ +I +L+ + A LF P R V W +++ G E L +F +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 89 S-----KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
S +P+ +V L +CA L L GK +H F K +++V +ALID+Y KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLH 202
+ + +VF + VV W+S+I G+ M + + P+ VT + V
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 187
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD----LLSRAGRLEEAREVIANMSV 258
AC+ + GR++ ++R G+++ CL + L + G ++ A + MS
Sbjct: 188 ACAQLSNFKLGRSVHGFVKR-----KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS- 241
Query: 259 PPNRVVWGALLG 270
+ + W ++
Sbjct: 242 DKDIISWSTMVA 253
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 192/336 (57%), Gaps = 1/336 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A DLF+ MP+++V +W + G A GM E++ VF M G++P+ + +V +L ++
Sbjct: 334 AVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISE 393
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L+ +H F NGF N ++ +LI++Y KC +E+ +VF+GM + VV+WSS+
Sbjct: 394 LGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 453
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I + H M KPN VTFI +L ACSH GL+ +G + IM Y
Sbjct: 454 IAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 513
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ P EHY +VDLL R G L+ A +VI NM + +WGALLG CR+H+NI + E A
Sbjct: 514 KLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 573
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L LD + GYY+++SN+Y+ W +++RRL+K + + K G S + + V
Sbjct: 574 AKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 633
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
F+AGD H ++ I+E+ KL KM+ + P +
Sbjct: 634 FIAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 669
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 117/233 (50%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAV 99
G + A +F P+ +V WTS+I G + G E AL FS M + P+ VT+V+V
Sbjct: 126 GQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 185
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACAQL + + G+SVH F K G + + N+L+ +Y K G ++ +F M ++ +
Sbjct: 186 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 245
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SWS+M+ +A + M+ +KPN+VT + VL AC+ + +++G +
Sbjct: 246 ISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE- 304
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
+ +YG L+D+ + E+A ++ M P V+ W L G
Sbjct: 305 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRM--PKKDVIAWAVLFSG 355
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 13/251 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + A +LF M +++ SW++++ A G + L +F+EM KPN VTVV+V
Sbjct: 227 TGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSV 286
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + +LE G +H A GF V AL+DMY+KC E+ +F M ++ V
Sbjct: 287 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDV 346
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++W+ + G+A + M+ G +P+ + + +L S +G++ + L
Sbjct: 347 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAF 406
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ ++ G E+ L+++ ++ +E+A +V M+ + V W +++ H
Sbjct: 407 VIKN-----GFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGFH 460
Query: 276 KNIVLAEEAMR 286
EEA++
Sbjct: 461 GQ---GEEALK 468
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 16/252 (6%)
Query: 29 TWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
+++ +I +L+ + A LF P R V W +++ G E L +F +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 89 S-----KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
S +P+ +V L +CA L L GK +H F K +++V +ALID+Y KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLH 202
+ + +VF + VV W+S+I G+ M + + P+ VT + V
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 187
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD----LLSRAGRLEEAREVIANMSV 258
AC+ + GR++ ++R G+++ CL + L + G ++ A + MS
Sbjct: 188 ACAQLSNFKLGRSVHGFVKR-----KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS- 241
Query: 259 PPNRVVWGALLG 270
+ + W ++
Sbjct: 242 DKDIISWSTMVA 253
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 206/340 (60%), Gaps = 9/340 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLH+Y++ G A +F +MP R+ TWN+ I+ LI G + AR +F M R+V SW
Sbjct: 155 LLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSW 214
Query: 62 TSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T VI G + +AL +F +M E DG +PNEVT++ V A A LG+++ +SVH + +
Sbjct: 215 TLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVE 274
Query: 121 GNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE--RTVVSWSSMIVGFAMHXXXXX 177
GF ++ + NALID+Y KCGC+E +F M + R VSW+S++ G+A
Sbjct: 275 KRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVRE 334
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M + G++PN+V F+ +L ACSH GLV++G M DYG+VP ++HYGC++
Sbjct: 335 AVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVI 394
Query: 238 DLLSRAGRLEEAREVIANMSVP---PNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
D+L RAGRL EA +V + VP N V+W LLG C +H N+ + + + + +++
Sbjct: 395 DMLGRAGRLGEAEKVA--LEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKG 452
Query: 295 NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
+ G YV+MSN++A G++++V R+R ++ R V K PG S
Sbjct: 453 HGGDYVLMSNIFASVGRFKDVERLREMIDKRNVFKLPGYS 492
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 183/300 (61%), Gaps = 4/300 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G +A +F + + SW ++I GL++ G+ +A+ VF +M++ G +P+ +T+V+V+
Sbjct: 146 GDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVM 205
Query: 101 VACAQLGDLEFGKSVHRF---AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
AC +GDL +H++ AK N + + + N+LIDMY KCG ++ Y VF M +R
Sbjct: 206 SACGSIGDLYLALQLHKYVFQAKTNEWTV-ILMSNSLIDMYGKCGRMDLAYEVFATMEDR 264
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
V SW+SMIVG+AMH M G+KPNYVTFIGVL AC H G V +GR
Sbjct: 265 NVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYF 324
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+M+ YGI P ++HYGC+VDLL RAG ++AR ++ M + PN VVWG L+G C H N
Sbjct: 325 DMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGN 384
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
+ +AE +L L+ N+G YVV+SN+YA G W+EV RIR MK + K P S T
Sbjct: 385 VDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPAYSITT 444
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 15/232 (6%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+W ++I + + AL+++ M + G P+ T+ VL A +Q ++ G+ VH +
Sbjct: 64 NWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYG 123
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
G N Y + I++Y K G + ++VF+ E + SW+++I G +
Sbjct: 124 IKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAI 183
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY------ 233
M R G +P+ +T + V+ AC +G + L + Y +
Sbjct: 184 VVFVDMKRHGFEPDGITMVSVMSACGSIGDL-----YLALQLHKYVFQAKTNEWTVILMS 238
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
L+D+ + GR++ A EV A M N W +++ G +H + A+EA+
Sbjct: 239 NSLIDMYGKCGRMDLAYEVFATME-DRNVSSWTSMIVGYAMHGH---AKEAL 286
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/351 (38%), Positives = 200/351 (56%), Gaps = 11/351 (3%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+++ YA+CG A L F+ + + +WN + A I G + A F M R+V SW
Sbjct: 358 IIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSW 417
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I G A+ + AL++F +M G KPNEVT+V+V A A LG L+ GK H + +
Sbjct: 418 STMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRS 477
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER--TVVSWSSMIVGFAMHXXXXXXX 179
N + ALIDMY KCG + + F +R+ +V W+++I G A H
Sbjct: 478 ESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCL 537
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M R +KPN +TFIGVL AC H GLV+ G+ + M+ Y + P ++HYGC++D+
Sbjct: 538 EVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDI 597
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L RAG LEEA E+I +M + + V+WG LL CR H N+ + E A +L++L + G
Sbjct: 598 LGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGK 657
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDE 350
V++SN+YA AGKWEEVS +R +M+ + + + PG S FVAG +
Sbjct: 658 VLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYSG---------FVAGSD 699
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 160/361 (44%), Gaps = 44/361 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H Y C R AR +FD+MP+R++ TWN+M+ G V AR+LF + ++V SW
Sbjct: 226 LMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISW 285
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + G EAL+++ M + G PNEV +V ++ AC + + G +H
Sbjct: 286 GTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVK 345
Query: 122 NGFLRNVYVCNALIDMYVKCG-----CLE--------------------------EGYRV 150
GF ++ +I Y CG CL+ +
Sbjct: 346 RGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKT 405
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F+ M R V SWS+MI G+A M+ G+KPN VT + V A + +G +
Sbjct: 406 FDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTL 465
Query: 211 DKGRALLTIMRRDYGIVPGVEHY-GCLVDLLSRAGRLEEAREVIANM-----SVPPNRVV 264
+G+ MR + +P ++ L+D+ ++ G + A + + SV P
Sbjct: 466 QEGKLAHEYMRSES--IPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSP---- 519
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDL-LNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
W A++ G H + + E + + + N ++ + + AG E RI + MK
Sbjct: 520 WNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMK 579
Query: 324 S 324
S
Sbjct: 580 S 580
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 129/275 (46%), Gaps = 45/275 (16%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++YA CG+ ++A+L+FD D + NIM++ + G + AR LF MP + S+
Sbjct: 94 LINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSY 153
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + G EAL+VF +M G PN++T+V V+ AC+ LG++ + VH
Sbjct: 154 TTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVK 213
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+ V V L+ Y C + E R+F+ M ER +V+W+ M+ G+A
Sbjct: 214 MFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYA----------- 262
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLL 240
GLVD+ R L I +D V +G ++D
Sbjct: 263 ------------------------KTGLVDEARELFDGICDKD------VISWGTMIDGY 292
Query: 241 SRAGRLEEAREVIANMSVP---PNRVVWGALLGGC 272
+ GRL EA E+ M PN V+ L+ C
Sbjct: 293 IQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSAC 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 46/271 (16%)
Query: 92 NEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVF 151
+E+ +V+ L +C+ L + G+ +H G N ++ N+LI+MY KCG ++ +F
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 152 EG-------------------------------MRERTVVSWSSMIVGFAMHXXXXXXXX 180
+G M + VS+++MI+GF +
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY--GIV---PGVEHYGC 235
M G+ PN +T + V+ ACSH+G V R + ++ + + G+V + H C
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYC 231
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
L + EAR + M N V W +L G + A E + D+++
Sbjct: 232 LCS------GVREARRLFDEMP-ERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVIS 284
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
G M + Y + G+ E I R M G
Sbjct: 285 WG---TMIDGYIQKGRLREALEIYRAMLQTG 312
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 197/329 (59%), Gaps = 2/329 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y G+ A +F +MP D+ +WN +I+ +G + ++ F +MP +N+ SW SVI
Sbjct: 244 YVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVI 303
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G K + A+++FS+M+ G +P+ T+ ++L L DL GK +H+F +
Sbjct: 304 AGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VV 362
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
++ + N+LI MY +CG + + VF M+ + V++W++MI G+A H
Sbjct: 363 PDLPINNSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFER 422
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M + ++P Y+TFI VL+AC+H GLV++G+ M DYGI P VEH+ LVD+L R G
Sbjct: 423 MKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQG 482
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
+L+EA ++I NM V P++ VWGALLG CR+H N+ LA+ A + L +L+ + Y ++ N
Sbjct: 483 QLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFN 542
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGC 333
+YA+ G+W++ R+R LM+ VKK G
Sbjct: 543 LYADLGQWDDAERVRALMEENNVKKQAGS 571
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 63/315 (20%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLIN---VGYVGAARDLFSSMPQRNVRSWT 62
Y E AR +FD+MP RDI +WN++I+ + +V R LF MPQR+ SW
Sbjct: 5 YVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWN 64
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLE-----FGKSVHR 117
+VI G AK G ++A+++F M + N V+ AV+ GD++ F K R
Sbjct: 65 TVISGYAKNGRMDQAIEIFESM----PERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 120
Query: 118 FAKG-----NGFLRN-----------------------VYVCNALIDMYVKCGCLEEGYR 149
+ +G +RN VY N LI Y + G +EE
Sbjct: 121 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARH 180
Query: 150 VFEGMR-------------ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
VF+G+ +R VVSW+SM++ + M+ + + +
Sbjct: 181 VFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMV----ERDACS 236
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM 256
+ V+ +G +++ L M +P V + ++ S+ G L+ +E NM
Sbjct: 237 WNTVIGGYVQIGDMEEASKLFLEMP-----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 291
Query: 257 SVPPNRVVWGALLGG 271
N + W +++ G
Sbjct: 292 P-HKNLISWNSVIAG 305
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 157/387 (40%), Gaps = 50/387 (12%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKC---GMCEEALKVFSEMEKDGS 89
MI + + AR LF MP R++ SW +I G C EE K+F M
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIM----P 56
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
+ + V+ V+ A+ G ++ +++ F RNV CNA+++ ++ G ++
Sbjct: 57 QRDCVSWNTVISGYAKNGRMD--QAIEIFESMPE--RNVVSCNAVVNGFLLNGDVDSAVG 112
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI--GVLHACSHV 207
F M ER S S ++ G + G + + + + ++
Sbjct: 113 FFRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQR 172
Query: 208 GLVDKGRALLTIMRRDYG--------IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 259
G+V++ R + + D G + V + ++ +AG + ARE+ M V
Sbjct: 173 GMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM-VE 231
Query: 260 PNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIR 319
+ W ++GG + I EEA + ++ + + + + + +++ G ++ R++
Sbjct: 232 RDACSWNTVIGG---YVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIG---DLKRVK 285
Query: 320 RLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPD-- 377
++ K +S+ +AG E + KG E L +M++KG PD
Sbjct: 286 EFFENMPHKNLISWNSV---------IAGYEKNEDYKGAIE----LFSQMQLKGERPDRH 332
Query: 378 -------TSVVLLDLEDAKQKEIFLYR 397
S L+DL KQ F+ +
Sbjct: 333 TLSSILSVSTGLVDLYLGKQIHQFVTK 359
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 252 bits (644), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 201/338 (59%), Gaps = 10/338 (2%)
Query: 2 LLHLYASCGETRHARLMFDKM---PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNV 58
LL ++A CG A +F+++ R WN MI+ VG + +A+ LF MPQR+
Sbjct: 294 LLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDT 353
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEM--EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVH 116
SW S+I G + G +A+K+F EM +D KP+EVT+V+V AC LG+L G
Sbjct: 354 VSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAV 413
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
K N ++ V N+LI+MY +CG +++ +F+ M R +VS++++I GFA H
Sbjct: 414 SILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGM 473
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M G++P+ +T+I +L ACSH GL+D+G+ L ++ P V+HY C+
Sbjct: 474 ESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACM 528
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
+D+L RAGRLEEA ++I +M + P+ ++G+LL +HK + L E A L K++ N
Sbjct: 529 IDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNS 588
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
G Y ++SN+YA AG+W+E ++R M+ +GVKKT G S
Sbjct: 589 GNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLS 626
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 181/428 (42%), Gaps = 111/428 (25%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIA---------------HLI-------N 39
+L +YA G AR +FD+MP R +A WN+MI+ H++ N
Sbjct: 125 ILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRN 184
Query: 40 V-------------GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
V G + AR F MP+R+V SW +++ G A+ G EE +++F++M
Sbjct: 185 VITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLS 244
Query: 87 DGS-KPNEVTVVAVLVACAQLGDLEFGKS-VHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
G+ +P+E T V+ +C+ LGD +S V + GF N +V AL+DM+ KCG L
Sbjct: 245 PGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNL 304
Query: 145 EEGYRVFEG----------------------------------MRERTVVSWSSMIVGFA 170
E +++FE M +R VSW+SMI G+
Sbjct: 305 EAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYT 364
Query: 171 MHXXXXXXXXXXXXMIRV--GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ MI KP+ VT + V AC H+G + G ++I++ ++ I
Sbjct: 365 QNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNH-IQI 423
Query: 229 GVEHYGCLVDLLSRAGRLEEAREVIANMS------------------------------- 257
+ Y L+++ SR G +++A + M+
Sbjct: 424 SISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMK 483
Query: 258 ---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEE 314
+ P+R+ + A+L C + L +E R + + +Y M ++ AG+ EE
Sbjct: 484 EDGIEPDRITYIAILTAC---SHAGLLDEGQRLFESIKFPDVDHYACMIDMLGRAGRLEE 540
Query: 315 VSRIRRLM 322
++ + M
Sbjct: 541 AMKLIQSM 548
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 100/250 (40%), Gaps = 38/250 (15%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
RD N ++ G + AR LF MP R V W +I G KCG EEA +F M
Sbjct: 117 RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVM 176
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
GD E RNV +I + K G L
Sbjct: 177 ----------------------GDQEIS-------------RNVITWTTMITGHAKKGNL 201
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHA 203
+ F+ M ER+VVSW++M+ G+A M+ G ++P+ T+ V+ +
Sbjct: 202 KTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISS 261
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR- 262
CS +G +++ + G P L+D+ ++ G LE A ++ + V R
Sbjct: 262 CSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRS 321
Query: 263 -VVWGALLGG 271
V W A++
Sbjct: 322 SVPWNAMISA 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 134/321 (41%), Gaps = 26/321 (8%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEAL-KVFSEMEKDGS-KPNEVTVVAVLVACAQL 106
+F + +VR +T ++ ++ G+ + +F M + KPN + +V++ A
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPN-ASFYSVMMKSAGS 101
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
+ F V + +G+ R+ YV N ++ +Y K G +E ++F+ M +RTV W+ MI
Sbjct: 102 ESMLFLAHVLK----SGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 157
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
G+ M + N +T+ ++ G KG M D
Sbjct: 158 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMI-----TGHAKKGNLKTARMYFDKMP 212
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP----PNRVVWGALLGGCRLHKNIVLAE 282
V + ++ ++ G EE + +M P P+ W ++ C + L+E
Sbjct: 213 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSE 272
Query: 283 EAMRHLSKLDLLNDGYYV--VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
+R L Y+V + +++A+ G E +I + GV K SS+ +
Sbjct: 273 SIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKI---FEQLGVYKYR--SSVPWNA 327
Query: 341 VVHEFV-AGDETHPQAKGIFE 360
++ + GD P AK +F+
Sbjct: 328 MISAYARVGDL--PSAKHLFD 346
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/348 (38%), Positives = 197/348 (56%), Gaps = 32/348 (9%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y + G+ A+ +FD+MP R++A+WN MI + VG + +AR +F SMP++NV S+T++I
Sbjct: 191 YVTAGDVVEAKKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMI 250
Query: 66 YGLAKCGMCE-------------------------------EALKVFSEMEKDGSKPNEV 94
G AK G E EALKVF EME P+E
Sbjct: 251 DGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEF 310
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEG 153
+V+++ A +QLGDL+ + V + + L+ YV +AL+DM KCG +E ++F
Sbjct: 311 VLVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFRE 370
Query: 154 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
M +R +VS+ SMI GF++H M+ G+ P+ F VL ACSH GLVDKG
Sbjct: 371 MPKRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKG 430
Query: 214 RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCR 273
M +YGI P +H+ C+VDLL R+G+L +A E+I +M + PN WGAL+G C+
Sbjct: 431 WKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACK 490
Query: 274 LHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
LH + L E L +L+ N YV++SN+YA AG+W++VS +R L
Sbjct: 491 LHGDTELGEIVANRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVRIL 538
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 118/283 (41%), Gaps = 58/283 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CGE AR +FD++ R++ +W M+ + G V A+ +F MP RNV SW
Sbjct: 156 LVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMPLRNVASW 215
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G K G A VF M +
Sbjct: 216 NAMIRGFVKVGDLSSARGVFDSMPE----------------------------------- 240
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+NV +ID Y K G +E +FE E+ VV+WS++I G+ +
Sbjct: 241 ----KNVVSFTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKV 296
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI-------MRRDYGIVPGVEHYG 234
M + + P+ + ++ A S +G + + + + +++DY I
Sbjct: 297 FLEMESMKVIPDEFVLVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVI-------S 349
Query: 235 CLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLH 275
LVD+ ++ G +E A ++ M P R V + +++ G +H
Sbjct: 350 ALVDMNAKCGNMERALKLFREM---PKRDLVSYCSMIHGFSIH 389
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 172/419 (41%), Gaps = 59/419 (14%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLIN------VGYVGAARDLFSSMPQRNV 58
L +C +H + + + QR + +I++ I+ + + + +F+ + +
Sbjct: 21 LLKACKRIQHLQQVHASIIQRGLEQDQFLISNFISLANTLSISTLSYSTAVFNRVLNPST 80
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
W + I + + + F M+ +G+ P+ T +V+ AC+ + GKSVH
Sbjct: 81 FLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGS 140
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
G ++++V L+DMY KCG + + +VF+ + +R VVSW++M+VG+
Sbjct: 141 VFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEA 200
Query: 179 XXXXXXM---------------IRVG------------MKPNYVTFIGVLHACSHVGLVD 211
M ++VG + N V+F ++ + G ++
Sbjct: 201 KKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAKAGDME 260
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREV---IANMSVPPNRVVWGAL 268
R L + V + L+ + G EA +V + +M V P+ V +L
Sbjct: 261 SSRFLF-----EQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSL 315
Query: 269 LGGCRLHKNIVLAEEAMRHL--SKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
+ ++ LA+ ++ S +DL D + ++ A+ G E ++ R M R
Sbjct: 316 MSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPKRD 375
Query: 327 VKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDL 385
+ ++ ++H F H + ++ ++L M+G +PD + + L
Sbjct: 376 L--------VSYCSMIHGF----SIHGHGEDAVNLFNRML----MEGIVPDEAAFTIVL 418
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 211/361 (58%), Gaps = 6/361 (1%)
Query: 2 LLHLYASCGETRHARLMFD--KMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
L+ +YA CG A + K + +A W +++ G V AR LF M +R+V
Sbjct: 262 LVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVV 321
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SWT++I G + G +EAL++F ++E G KP+EV VVA L ACA+LG LE G+ +HR
Sbjct: 322 SWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQY 381
Query: 120 KGNGFLRNVY--VCNALIDMYVKCGCLEEGYRVFEGMRE--RTVVSWSSMIVGFAMHXXX 175
G + ++ +A++DMY KCG ++ VF + +T ++S+I G A H
Sbjct: 382 AGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRG 441
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M +G+KP+ +TF+ VL AC H GLVD G+ L M YG+ P +EHYGC
Sbjct: 442 EYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGC 501
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+VDLL RAG L+EA +I M N V+W ALL C++H ++ LA A L +L +
Sbjct: 502 MVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQHDH 561
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQA 355
YV++SN+ ++ + +E + +R+ + + G++K PG S + ++ +H+F+AGD++HP+A
Sbjct: 562 GAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEA 621
Query: 356 K 356
K
Sbjct: 622 K 622
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 12/287 (4%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKC-GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ-- 105
LF+ + ++ W ++I ++ + +F M P+ T +L ACA
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVL 130
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ +FG VH NGF +V+V NAL++ Y G + Y+VF+ R VS+++M
Sbjct: 131 ISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTM 190
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I GFA M V ++P+ TF+ +L CS + GR + ++ R+ G
Sbjct: 191 INGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELG 250
Query: 226 IVPG-VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV---WGALLGGCRLHKNIVLA 281
G V LVD+ ++ GRL A V++ V P + V W +L+ L + +A
Sbjct: 251 CFGGNVLLVNKLVDMYAKCGRLVMAETVLS--VVKPGKSVVAAWTSLVSAYALRGEVKVA 308
Query: 282 EEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
+ + D+++ + M + Y+ AG ++E + ++ G+K
Sbjct: 309 RRLFDQMGERDVVS---WTAMISGYSHAGCFQEALELFVKLEGLGMK 352
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 118/276 (42%), Gaps = 52/276 (18%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N ++ G V A +F R+ S+ ++I G A+ G +VF EM
Sbjct: 152 DVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMR 211
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR--FAKGNGFLRNVYVCNALIDMYVKCG- 142
+P+E T VA+L C+ L D G+ VH + + F NV + N L+DMY KCG
Sbjct: 212 GVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGR 271
Query: 143 ----------------------CLEEGY----------RVFEGMRERTVVSWSSMIVGFA 170
L Y R+F+ M ER VVSW++MI G++
Sbjct: 272 LVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISGYS 331
Query: 171 MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV 230
+ +GMKP+ V + L AC+ +G ++ GR I R+ G
Sbjct: 332 HAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGR---RIHRQYAG----- 383
Query: 231 EHYGC---------LVDLLSRAGRLEEAREVIANMS 257
E++ C +VD+ ++ G ++ A +V S
Sbjct: 384 ENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTS 419
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 192/339 (56%), Gaps = 8/339 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A ++F M ++++ SW S+I +CG LK+F M + +P+ VTV VL AC
Sbjct: 288 ALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTH 347
Query: 106 LGDLEFGKSVHRFAKGNGF--------LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
L L G+ +H + NG +V + NAL+DMY KCG + + VF+ M E+
Sbjct: 348 LAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEK 407
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
V SW+ MI G+ MH M + + PN ++F+G+L ACSH G+V +G L
Sbjct: 408 DVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFL 467
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
M YG+ P VEHY C++D+L RAG+L EA +++ M + V W ALL CR++K+
Sbjct: 468 AEMDSKYGVPPSVEHYTCVIDMLCRAGKLVEAYDLMLTMPFKADPVGWRALLAACRIYKD 527
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
LAE A + +L+ + G YV+MSNVY G++E+VS +R M+ + VKK PGCS I
Sbjct: 528 TDLAEIAASKVIELEPGHCGNYVLMSNVYGVVGRYEQVSELRHTMRQQNVKKRPGCSWIE 587
Query: 338 IDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIP 376
+ VH F+ GD THPQ I+ L ++ +GY+P
Sbjct: 588 LMNGVHVFLTGDRTHPQTDFIYAGLNSLTAVLQEQGYVP 626
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 137/287 (47%), Gaps = 21/287 (7%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEE 76
L+F + D+ + ++ + V A ++F +P R+V W S++ G A+ G EE
Sbjct: 158 LLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEE 217
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
AL +F M ++G P TV VL + +GD + G++VH F G+ +V V NALID
Sbjct: 218 ALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALID 277
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
MY KC C + VFE M E+ + SW+S+I M+ ++P+ VT
Sbjct: 278 MYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVT 337
Query: 197 FIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG------------CLVDLLSRAG 244
VL AC+H+ + GR + Y IV G+ G L+D+ ++ G
Sbjct: 338 VTTVLPACTHLAALMHGREI-----HGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCG 392
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
+ +AR V NM+ + W ++ G +H +EA+ +++
Sbjct: 393 SMRDARMVFDNMT-EKDVASWNIMITGYGMHG---YGDEALDTFTRM 435
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLGD 108
+ + +NV ++ ++I G G+ + + ++ +M G P++ T V+ AC GD
Sbjct: 89 YPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGD 148
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
+ K +H G +V+V +AL+ Y+K + + + VFE + R VV W+SM+ G
Sbjct: 149 VFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNG 208
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
+A M+ G+ P T GVL S +G D G+A+
Sbjct: 209 YAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAV 256
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----N 57
L+ +YA CG R AR++FD M ++D+A+WNIMI GY A D F+ M Q N
Sbjct: 384 LMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQAQLVPN 443
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEV 94
S+ ++ + GM +E L+ +EM+ P V
Sbjct: 444 EISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSV 480
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 8/194 (4%)
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE-- 152
T + L CAQ +L GK +H NGF + ++I+MY KC + +VF
Sbjct: 31 TCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYP 90
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK-PNYVTFIGVLHACSHVGLVD 211
++ V +++++I GF + M +G+ P+ TF V+ AC G V
Sbjct: 91 THHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVF 150
Query: 212 KGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + + ++ + +G+ V LV + + +A EV + V + V+W +++ G
Sbjct: 151 EVKKIHGLLFK-FGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPV-RDVVLWNSMVNG 208
Query: 272 CRLHKNIVLAEEAM 285
+ I EEA+
Sbjct: 209 ---YAQIGCFEEAL 219
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 189/336 (56%), Gaps = 1/336 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A D F+ MP+++V +W + G A GM E++ VF M G++P+ + +V +L ++
Sbjct: 272 AVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSE 331
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L+ H F NGF N ++ +LI++Y KC +E+ +VF+GM + VV+WSS+
Sbjct: 332 LGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 391
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I + H M KPN VTFI +L ACSH GL+ +G + IM Y
Sbjct: 392 IAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 451
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ P EHY +VDLL R G L+ A ++I NM + +WGALLG CR+H+NI + E A
Sbjct: 452 KLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 511
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L LD + GYY+++SN+Y W +++RRL+K + + K G S + + V
Sbjct: 512 AKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 571
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
FVAGD H ++ I+E+ KL KM+ + P +
Sbjct: 572 FVAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 607
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAV 99
G + A ++F P+ +V WTS++ G + G E AL FS M + P+ VT+V+V
Sbjct: 64 GQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 123
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACAQL + + G+SVH F K G + + N+L+ +Y K G ++ +F M ++ +
Sbjct: 124 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 183
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SWS+M +A + M+ +KPN+VT + VL AC+ + +++G +
Sbjct: 184 ISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE- 242
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
+ +YG L+D+ + E+A + M P V+ W L G
Sbjct: 243 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRM--PKKDVIAWAVLFSG 293
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + A +LF M +++ SW+++ A G + L +F EM KPN VTVV+V
Sbjct: 165 TGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSV 224
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + +LE G +H A GF V AL+DMY+KC E+ F M ++ V
Sbjct: 225 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDV 284
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++W+ + G+A + M+ G +P+ + + +L S +G++ + +
Sbjct: 285 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-----V 339
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ I G E+ L+++ ++ +E+A +V M+ + V W +++ H
Sbjct: 340 CFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGFH 398
Query: 276 KNIVLAEEAMRHLSKL 291
EEA++ ++
Sbjct: 399 GQ---GEEALKFFYQM 411
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
KP+ +V L +CA L L GK +H F K +++V +ALID+Y KCG + +
Sbjct: 12 KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVE 71
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVG 208
VF + VV W+S++ G+ M + + P+ VT + V AC+ +
Sbjct: 72 VFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 131
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYGCLVD----LLSRAGRLEEAREVIANMSVPPNRVV 264
GR++ ++R G+++ CL + L + G ++ A + MS + +
Sbjct: 132 NFKLGRSVHGFVKR-----KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS-DKDIIS 185
Query: 265 WGALLG 270
W +
Sbjct: 186 WSTMFA 191
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 189/336 (56%), Gaps = 1/336 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A D F+ MP+++V +W + G A GM E++ VF M G++P+ + +V +L ++
Sbjct: 364 AVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSE 423
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L+ H F NGF N ++ +LI++Y KC +E+ +VF+GM + VV+WSS+
Sbjct: 424 LGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 483
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I + H M KPN VTFI +L ACSH GL+ +G + IM Y
Sbjct: 484 IAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 543
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ P EHY +VDLL R G L+ A ++I NM + +WGALLG CR+H+NI + E A
Sbjct: 544 KLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 603
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L LD + GYY+++SN+Y W +++RRL+K + + K G S + + V
Sbjct: 604 AKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 663
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
FVAGD H ++ I+E+ KL KM+ + P +
Sbjct: 664 FVAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 699
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAV 99
G + A ++F P+ +V WTS++ G + G E AL FS M + P+ VT+V+V
Sbjct: 156 GQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 215
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACAQL + + G+SVH F K G + + N+L+ +Y K G ++ +F M ++ +
Sbjct: 216 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 275
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SWS+M +A + M+ +KPN+VT + VL AC+ + +++G +
Sbjct: 276 ISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE- 334
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
+ +YG L+D+ + E+A + M P V+ W L G
Sbjct: 335 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRM--PKKDVIAWAVLFSG 385
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + A +LF M +++ SW+++ A G + L +F EM KPN VTVV+V
Sbjct: 257 TGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSV 316
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + +LE G +H A GF V AL+DMY+KC E+ F M ++ V
Sbjct: 317 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDV 376
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++W+ + G+A + M+ G +P+ + + +L S +G++ + +
Sbjct: 377 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-----V 431
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ I G E+ L+++ ++ +E+A +V M+ + V W +++ H
Sbjct: 432 CFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGFH 490
Query: 276 KNIVLAEEAMRHLSKL 291
EEA++ ++
Sbjct: 491 GQ---GEEALKFFYQM 503
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 16/235 (6%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-----KPNEVTVVAVL 100
A LF P + V W +++ G E L +F +M+ S KP+ +V L
Sbjct: 55 AHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIAL 114
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+CA L L GK +H F K +++V +ALID+Y KCG + + VF + VV
Sbjct: 115 KSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVV 174
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
W+S++ G+ M + + P+ VT + V AC+ + GR++
Sbjct: 175 LWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 220 MRRDYGIVPGVEHYGCLVD----LLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
++R G+++ CL + L + G ++ A + MS + + W +
Sbjct: 235 VKR-----KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS-DKDIISWSTMFA 283
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 189/336 (56%), Gaps = 1/336 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A D F+ MP+++V +W + G A GM E++ VF M G++P+ + +V +L ++
Sbjct: 364 AVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSE 423
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
LG L+ H F NGF N ++ +LI++Y KC +E+ +VF+GM + VV+WSS+
Sbjct: 424 LGILQQAVCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSI 483
Query: 166 IVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I + H M KPN VTFI +L ACSH GL+ +G + IM Y
Sbjct: 484 IAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKY 543
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
+ P EHY +VDLL R G L+ A ++I NM + +WGALLG CR+H+NI + E A
Sbjct: 544 KLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGALLGACRIHQNIKMGEVA 603
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHE 344
++L LD + GYY+++SN+Y W +++RRL+K + + K G S + + V
Sbjct: 604 AKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRS 663
Query: 345 FVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSV 380
FVAGD H ++ I+E+ KL KM+ + P +
Sbjct: 664 FVAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQI 699
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 5/233 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAV 99
G + A ++F P+ +V WTS++ G + G E AL FS M + P+ VT+V+V
Sbjct: 156 GQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 215
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACAQL + + G+SVH F K G + + N+L+ +Y K G ++ +F M ++ +
Sbjct: 216 ASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 275
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SWS+M +A + M+ +KPN+VT + VL AC+ + +++G +
Sbjct: 276 ISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE- 334
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
+ +YG L+D+ + E+A + M P V+ W L G
Sbjct: 335 LAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRM--PKKDVIAWAVLFSG 385
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G + A +LF M +++ SW+++ A G + L +F EM KPN VTVV+V
Sbjct: 257 TGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSV 316
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L ACA + +LE G +H A GF V AL+DMY+KC E+ F M ++ V
Sbjct: 317 LRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDV 376
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
++W+ + G+A + M+ G +P+ + + +L S +G++ + +
Sbjct: 377 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-----V 431
Query: 220 MRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ I G E+ L+++ ++ +E+A +V M+ + V W +++ H
Sbjct: 432 CFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTY-KDVVTWSSIIAAYGFH 490
Query: 276 KNIVLAEEAMRHLSKL 291
EEA++ ++
Sbjct: 491 GQ---GEEALKFFYQM 503
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 16/235 (6%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-----KPNEVTVVAVL 100
A LF P + V W +++ G E L +F +M+ S KP+ +V L
Sbjct: 55 AHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIAL 114
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+CA L L GK +H F K +++V +ALID+Y KCG + + VF + VV
Sbjct: 115 KSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVV 174
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
W+S++ G+ M + + P+ VT + V AC+ + GR++
Sbjct: 175 LWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGF 234
Query: 220 MRRDYGIVPGVEHYGCLVD----LLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
++R G+++ CL + L + G ++ A + MS + + W +
Sbjct: 235 VKR-----KGLDNKLCLANSLLHLYGKTGSIKNASNLFREMS-DKDIISWSTMFA 283
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 200/337 (59%), Gaps = 9/337 (2%)
Query: 2 LLHLYASCGETRHARLMFDKM---PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNV 58
LL ++A CG A +F+++ R WN MI+ VG + +AR LF MPQR+
Sbjct: 309 LLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDT 368
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
SW S+I G + G +A+K+F EM + SKP+EVT+V+V AC LG+L G
Sbjct: 369 VSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVS 428
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
K N ++ V N+LI MY +CG +++ +F+ M R +VS++++I GFA H
Sbjct: 429 ILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGME 488
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M G++P+ +T+I +L ACSH GL+ +G+ L ++ P V+HY C++
Sbjct: 489 SIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK-----FPDVDHYACMI 543
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
D+L RAGRLEEA ++I +M + P+ ++G+LL +HK + L E A L K++ N G
Sbjct: 544 DMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSG 603
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
YV++SN+YA AG+W++ ++R M+ +GVKKT G S
Sbjct: 604 NYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLS 640
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 180/427 (42%), Gaps = 110/427 (25%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIA---------------HLI-------N 39
+L +YA G AR +FD+MP R +A WN+MI+ H++ N
Sbjct: 140 ILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRN 199
Query: 40 V-------------GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
V G + AR F MP+R+V SW +++ G A+ G EE +++F++M
Sbjct: 200 VITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLS 259
Query: 87 DGS-KPNEVTVVAVLVACAQLGDLEFGKS-VHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
G+ +P+E T V V+ +C+ LGD +S V + GF N +V AL+DM+ KCG L
Sbjct: 260 PGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNL 319
Query: 145 EEGYRVFEG----------------------------------MRERTVVSWSSMIVGFA 170
E +++FE M +R VSW+SMI G+
Sbjct: 320 EAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYT 379
Query: 171 MHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
+ MI KP+ VT + V AC H+G + G ++I++ ++ I
Sbjct: 380 QNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENH-IQIS 438
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMS-------------------------------- 257
+ Y L+ + SR G +++A + M+
Sbjct: 439 ISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKE 498
Query: 258 --VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
+ P+R+ + A+L C + L E R + + +Y M ++ AG+ EE
Sbjct: 499 DGIEPDRITYIAILTAC---SHAGLLGEGQRLFESIKFPDVDHYACMIDMLGRAGRLEEA 555
Query: 316 SRIRRLM 322
++ + M
Sbjct: 556 MKLIQSM 562
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 101/250 (40%), Gaps = 38/250 (15%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
RD N ++ G + AR LF MP R V W +I G KCG EEA +F M
Sbjct: 132 RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVM 191
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
GD E RNV +I + K G L
Sbjct: 192 ----------------------GDQEIS-------------RNVITWTTMITGHAKKGNL 216
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIGVLHA 203
+ F+ M ER+VVSW++M+ G+A M+ G ++P+ T++ V+ +
Sbjct: 217 KTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISS 276
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR- 262
CS +G +++ + G P L+D+ ++ G LE A ++ + V R
Sbjct: 277 CSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRS 336
Query: 263 -VVWGALLGG 271
V W A++
Sbjct: 337 SVPWNAMISA 346
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 136/321 (42%), Gaps = 26/321 (8%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGM-CEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQL 106
+F + +VR +T ++ ++ G+ + + +F M + + KPN + +V++ A
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPN-TSFYSVMMKSAGS 116
Query: 107 GDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
+ F V + +G+ R+ YV N ++ +Y K G +E ++F+ M +RTV W+ MI
Sbjct: 117 ESMLFLAHVLK----SGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 172
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
G+ M + N +T+ ++ G KG M D
Sbjct: 173 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMI-----TGHAKKGNLKTARMYFDKMP 227
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP----PNRVVWGALLGGCRLHKNIVLAE 282
V + ++ ++ G EE + +M P P+ W ++ C + L+E
Sbjct: 228 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSE 287
Query: 283 EAMRHLSKLDLLNDGYYV--VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
+R L Y+V + +++A+ G E +I + GV K SS+ +
Sbjct: 288 SIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKI---FEQLGVYKYR--SSVPWNA 342
Query: 341 VVHEFV-AGDETHPQAKGIFE 360
++ + GD P A+ +F+
Sbjct: 343 MISAYARVGDL--PSARHLFD 361
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 196/362 (54%), Gaps = 2/362 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ H ++ +++ Q DI + ++ G V +A +F MP+ SW +I G
Sbjct: 327 GKFVHGYIIRNRI-QPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYV 385
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G +AL++F EM K +P+ +T +VL AC+QL LE G+ +H N
Sbjct: 386 TEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEV 445
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V AL+DMY KCG +EE + VF+ + ER +VSW+SMI + H M++
Sbjct: 446 VMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSN 505
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+KP+ VTF+ +L ACSH GLVD G M YGI+P +EHY CL+ LL RAGRL EA
Sbjct: 506 VKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEA 565
Query: 250 REVI-ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAE 308
E++ +N + + + L CRLHKN+ L E +L D + Y+++SN+YA
Sbjct: 566 YEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYAS 625
Query: 309 AGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVK 368
GKW+EV +R MK G+KK PGCS I I+ + F D +H +GI + L
Sbjct: 626 FGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSH 685
Query: 369 MK 370
M+
Sbjct: 686 ME 687
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 132/273 (48%), Gaps = 13/273 (4%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVG---------AARDLFSSMPQRNV 58
+CG R R++ +M + +M+ ++ VG A LF MP ++V
Sbjct: 115 ACGGLR--RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDV 172
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
W +VI + G EEAL+ F M + G +P+ VT+ + +CA+L DL+ G+ +H+
Sbjct: 173 ACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKE 232
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+GF + +V AL+DMY KCG LE VFE M +TVV+W+SMI G+
Sbjct: 233 LVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISC 292
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M G+KP T L ACS + +G+ + + R+ I P + L+D
Sbjct: 293 IQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR-IQPDIFLNSSLMD 351
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L + G++E A E I + V W ++ G
Sbjct: 352 LYFKCGKVESA-ETIFKLMPKTTTVSWNVMISG 383
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 140/284 (49%), Gaps = 36/284 (12%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A ++F MP + V +W S+I G G +++F M +G KP T+ + L
Sbjct: 256 GQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTL 315
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+AC+Q L GK VH + N ++++ ++L+D+Y KCG +E +F+ M + T V
Sbjct: 316 MACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTV 375
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-I 219
SW+ MI G+ M + ++P+ +TF VL ACS + ++KGR + I
Sbjct: 376 SWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLI 435
Query: 220 MRRDYG---IVPGV------------EHYG---CLV--DLLS---------RAGRLEEAR 250
+ R+ G +V G E +G CL DL+S GR+ EA
Sbjct: 436 VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEAL 495
Query: 251 EVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
E+ A M +V P+RV + A+L C H +V ++ + H +++
Sbjct: 496 ELFAEMLQSNVKPDRVTFLAILSACS-HAGLV--DDGLYHFNQM 536
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 10/253 (3%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFS 82
Q D+ +I+ ++ A+++F + + ++ G + M +EAL +F
Sbjct: 35 QNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFD 94
Query: 83 E-MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+ M KP+ T +VL AC L + G+ +H G + ++ V ++L+ MY KC
Sbjct: 95 KLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKC 154
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
E ++F+ M ++ V W+++I + M R G +P+ VT +
Sbjct: 155 NEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAI 214
Query: 202 HACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+C+ + +D+GR + ++ + + V LVD+ + G+LE A EV M P
Sbjct: 215 SSCARLLDLDRGREIHKELVNSGFRMDSFVS--AALVDMYGKCGQLEMAIEVFEQM---P 269
Query: 261 NRVV--WGALLGG 271
N+ V W +++ G
Sbjct: 270 NKTVVAWNSMING 282
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 32/156 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA CG A +F +P+RD+ +W MI + G V A +LF+ M Q NV
Sbjct: 450 LLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNV--- 506
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAK 120
KP+ VT +A+L AC+ G ++ G ++
Sbjct: 507 ----------------------------KPDRVTFLAILSACSHAGLVDDGLYHFNQMIN 538
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
G + + + LI + + G L E Y + + E
Sbjct: 539 VYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPE 574
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 196/362 (54%), Gaps = 2/362 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ H ++ +++ Q DI + ++ G V +A +F MP+ SW +I G
Sbjct: 327 GKFVHGYIIRNRI-QPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYV 385
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G +AL++F EM K +P+ +T +VL AC+QL LE G+ +H N
Sbjct: 386 TEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEV 445
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V AL+DMY KCG +EE + VF+ + ER +VSW+SMI + H M++
Sbjct: 446 VMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSN 505
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+KP+ VTF+ +L ACSH GLVD G M YGI+P +EHY CL+ LL RAGRL EA
Sbjct: 506 VKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEA 565
Query: 250 REVI-ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAE 308
E++ +N + + + L CRLHKN+ L E +L D + Y+++SN+YA
Sbjct: 566 YEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYAS 625
Query: 309 AGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVK 368
GKW+EV +R MK G+KK PGCS I I+ + F D +H +GI + L
Sbjct: 626 FGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSH 685
Query: 369 MK 370
M+
Sbjct: 686 ME 687
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 132/273 (48%), Gaps = 13/273 (4%)
Query: 8 SCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVG---------AARDLFSSMPQRNV 58
+CG R R++ +M + +M+ ++ VG A LF MP ++V
Sbjct: 115 ACGGLR--RVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDV 172
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
W +VI + G EEAL+ F M + G +P+ VT+ + +CA+L DL+ G+ +H+
Sbjct: 173 ACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKE 232
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+GF + +V AL+DMY KCG LE VFE M +TVV+W+SMI G+
Sbjct: 233 LVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISC 292
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M G+KP T L ACS + +G+ + + R+ I P + L+D
Sbjct: 293 IQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR-IQPDIFLNSSLMD 351
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
L + G++E A E I + V W ++ G
Sbjct: 352 LYFKCGKVESA-ETIFKLMPKTTTVSWNVMISG 383
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 140/284 (49%), Gaps = 36/284 (12%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A ++F MP + V +W S+I G G +++F M +G KP T+ + L
Sbjct: 256 GQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTL 315
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
+AC+Q L GK VH + N ++++ ++L+D+Y KCG +E +F+ M + T V
Sbjct: 316 MACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTV 375
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-I 219
SW+ MI G+ M + ++P+ +TF VL ACS + ++KGR + I
Sbjct: 376 SWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLI 435
Query: 220 MRRDYG---IVPGV------------EHYG---CLV--DLLS---------RAGRLEEAR 250
+ R+ G +V G E +G CL DL+S GR+ EA
Sbjct: 436 VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEAL 495
Query: 251 EVIANM---SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
E+ A M +V P+RV + A+L C H +V ++ + H +++
Sbjct: 496 ELFAEMLQSNVKPDRVTFLAILSACS-HAGLV--DDGLYHFNQM 536
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 10/253 (3%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFS 82
Q D+ +I+ ++ A+++F + + ++ G + M +EAL +F
Sbjct: 35 QNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFD 94
Query: 83 E-MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
+ M KP+ T +VL AC L + G+ +H G + ++ V ++L+ MY KC
Sbjct: 95 KLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKC 154
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
E ++F+ M ++ V W+++I + M R G +P+ VT +
Sbjct: 155 NEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAI 214
Query: 202 HACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPP 260
+C+ + +D+GR + ++ + + V LVD+ + G+LE A EV M P
Sbjct: 215 SSCARLLDLDRGREIHKELVNSGFRMDSFVS--AALVDMYGKCGQLEMAIEVFEQM---P 269
Query: 261 NRVV--WGALLGG 271
N+ V W +++ G
Sbjct: 270 NKTVVAWNSMING 282
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 32/156 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA CG A +F +P+RD+ +W MI + G V A +LF+ M Q NV
Sbjct: 450 LLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNV--- 506
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAK 120
KP+ VT +A+L AC+ G ++ G ++
Sbjct: 507 ----------------------------KPDRVTFLAILSACSHAGLVDDGLYHFNQMIN 538
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
G + + + LI + + G L E Y + + E
Sbjct: 539 VYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPE 574
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 207/389 (53%), Gaps = 38/389 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ LY+ CG + A L+FD M ++DI SW
Sbjct: 394 IITLYSKCGLLQEASLVFDGMTRKDII-------------------------------SW 422
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++I + +EA S M ++G KPNE + +VL C + LE GK VH +A
Sbjct: 423 STIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALC 482
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G V +ALI MY + G L+E ++F+ ++ +VSW++MI G+A H
Sbjct: 483 IGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISL 542
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
+ VG+ P+YVTFIG+L AC+H GLVD G +M +Y I P EHYGC++DLL
Sbjct: 543 FENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLC 602
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAGRL EA ++ NM P + VVW LL CR H ++ A A + +L + G ++
Sbjct: 603 RAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHIT 662
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP--QAKGIF 359
++N+Y+ +G+ EE + +R+LMKS+GV K PG S I + ++ FVAG ++HP A+ F
Sbjct: 663 LANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLKDAENTF 722
Query: 360 EMWEKLLVKMKMKGYIPDTSVVLLDLEDA 388
+K + ++ IP LLD EDA
Sbjct: 723 LSSKKRAAEQELSRDIP-----LLDEEDA 746
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 123/253 (48%), Gaps = 12/253 (4%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
LF M +V SWT++I + G E AL F M K PNE T +V+ ACA L
Sbjct: 309 LFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAI 368
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
++G+ +H A G + + V N++I +Y KCG L+E VF+GM + ++SWS++I
Sbjct: 369 TKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISV 428
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ M R G KPN VL C + L++ G+ + Y +
Sbjct: 429 YCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQV-----HAYALCI 483
Query: 229 GVEH----YGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGGCRLHKNIVLAEE 283
G++H + L+ + SR+G L+EA ++ S+ N +V W A++ G H A
Sbjct: 484 GLDHETMVHSALISMYSRSGNLQEASKIFD--SIKNNDIVSWTAMINGYAEHGYSQEAIS 541
Query: 284 AMRHLSKLDLLND 296
++S + L+ D
Sbjct: 542 LFENISSVGLMPD 554
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKD-GS 89
N + L+ +G + ARD+F+ M R+ SWT++I G EAL +FS M D G
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
+ ++ V L ACA ++ FG+ +H F+ +G + +V+V +AL+DMY+K G E+G
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
VFE M R VVSW+++IVG M R + + TF L A + GL
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 210 VDKGRAL 216
+ G+A+
Sbjct: 268 LHYGKAI 274
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 1/220 (0%)
Query: 38 INVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
+ VG +F +M RNV SWT+VI GL G + L FSEM + + T
Sbjct: 197 MKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFA 256
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
L A A+ G L +GK++H GF YV N L MY KC + R+F M
Sbjct: 257 VALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTP 316
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
VVSW+++I+ + M + + PN TF V+ AC+++ + G +
Sbjct: 317 DVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIH 376
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
R G+V + ++ L S+ G L+EA V M+
Sbjct: 377 GHALR-LGLVDALSVSNSIITLYSKCGLLQEASLVFDGMT 415
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 194/346 (56%), Gaps = 32/346 (9%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y + G+ A+ +FD MP R++A+WN MI + VG + +AR +F SMP++NV S+T+++
Sbjct: 191 YVTAGDVVKAKKVFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMV 250
Query: 66 YGLAKCGMCE-------------------------------EALKVFSEMEKDGSKPNEV 94
G AK G E EALKVF EME P+E
Sbjct: 251 DGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEF 310
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEG 153
+V ++ A +QLGDL+ + V + N L+ +V +AL+DM KCG +E ++F+
Sbjct: 311 VLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQE 370
Query: 154 MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG 213
M ER +VS+ SMI GF++H M+ G+ P+ F VL ACSH GL+DKG
Sbjct: 371 MPERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKG 430
Query: 214 RALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCR 273
M +YGI P +H+ C+VDLL R+G+L +A E+I +M + PN WGAL+G C+
Sbjct: 431 WKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACK 490
Query: 274 LHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIR 319
L + L E L +L+ N YV++SN+YA AG+W++VS +R
Sbjct: 491 LQGDTELGEIVANRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVR 536
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 117/276 (42%), Gaps = 44/276 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG+ AR +F+++ +R++ +W M+ + G V A+ +F MP RNV SW
Sbjct: 156 LIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGMPLRNVASW 215
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G K G A VF M +
Sbjct: 216 NAMIRGFVKVGDLSSARGVFDSMPE----------------------------------- 240
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+NV ++D Y K G +E +FE E+ VV+WS++I G+ +
Sbjct: 241 ----KNVVSFTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKV 296
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M + + P+ +G++ A S +G + + + + + + + LVD+ +
Sbjct: 297 FLEMESMNVIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMNA 356
Query: 242 RAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLH 275
+ G +E A ++ M P R V + +++ G +H
Sbjct: 357 KCGNMERALKLFQEM---PERDLVSYCSMIHGFSIH 389
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 153/351 (43%), Gaps = 28/351 (7%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYV------GAARDLFSSMPQRNV 58
L +C +H + + + QR + ++I++ I++ + +F+ + +
Sbjct: 21 LLKACKRIQHLQQVHASIIQRGLEQDQVLISNFISLANTLSISTRSYSTAVFNRVLNPST 80
Query: 59 RSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
W + I + + + F M+ +G+ P+ T +V+ AC+ + GKSVH
Sbjct: 81 FLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCKVLVGKSVHGS 140
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
G +++++ LIDMY KCG + + +VF + ER VVSW++M+VG+
Sbjct: 141 VFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKA 200
Query: 179 XXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M +R N ++ ++ VG + R + M V + +V
Sbjct: 201 KKVFDGMPLR-----NVASWNAMIRGFVKVGDLSSARGVFDSMPE-----KNVVSFTTMV 250
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
D ++AG +E +R + + + V W AL+ G + A EA++ +++ +N
Sbjct: 251 DGYAKAGDMESSR-FLFEQAAEKDVVTWSALISGYVQNGE---ANEALKVFLEMESMN-- 304
Query: 298 YYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI--DGVVHEFV 346
V+ + + G S++ L ++ V G +SI + D V+ V
Sbjct: 305 ---VIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALV 352
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 199/353 (56%), Gaps = 10/353 (2%)
Query: 10 GETRHARLM----FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
G+ H +M FD+ Q N ++ G+ +A +F+ + +++ +W +I
Sbjct: 425 GQQIHGHVMKRGFFDEFVQ------NSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMI 478
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G ++ G+ EAL +F EM K+ + N+VT ++ + AC+ LG L+ GK +H G
Sbjct: 479 CGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQ 538
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
++Y+ AL+DMY KCG L+ +VF+ + E++VVSWS+MI +H M
Sbjct: 539 NDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKM 598
Query: 186 IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGR 245
+ +KPN VTF+ +L AC H G V +G+ MR YGIVP VEH+ +VDLLSRAG
Sbjct: 599 VLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGD 658
Query: 246 LEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNV 305
+ A E+I ++ P +WGALL GCR++ + + E L + + GYY ++SN+
Sbjct: 659 INGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNI 718
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
YAE G W E ++R M+ G+KK PG S++ ID ++ F +GD + Q K I
Sbjct: 719 YAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMKEI 771
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 117/224 (52%), Gaps = 1/224 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A+ +F M R++ W+S+I + G+ E L++F M +G +P+ V +++V AC +
Sbjct: 156 AKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGK 215
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+G L KSVH + G + + + N+LI MY +CG L R+FE + +R+ W+SM
Sbjct: 216 IGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSM 275
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I + + M ++PN VT I VL++C+ +G + +G+++ + R+
Sbjct: 276 ISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAM 335
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
V G++ L+D S ++ +++ ++ N V W L+
Sbjct: 336 GVTGLDLGPALIDFYSACWKMSSCEKLLHSIG-NENIVSWNTLI 378
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 1 MLLHLYASCGE--------TRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSS 52
MLL + +CG+ + H +M + M D + N +I GY+ A+ LF
Sbjct: 205 MLLSVAEACGKIGCLRLAKSVHGYVMREGMVG-DGSLSNSLIVMYSQCGYLCRAKRLFEC 263
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFG 112
+ R+ WTS+I + EEAL VF +M+ +PN+VT+++VL +CA+LG L+ G
Sbjct: 264 IDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEG 323
Query: 113 KSVHRFAKGNGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAM 171
KSVH F N + + + ALID Y C + ++ + +VSW+++I +A
Sbjct: 324 KSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAR 383
Query: 172 HXXXXXXXXXXXXMIRVGMKPN 193
M+ G+ P+
Sbjct: 384 EGLNDEAMAFFACMVAKGIMPD 405
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 119/261 (45%), Gaps = 10/261 (3%)
Query: 1 MLLHLYASCGETR-----HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
+ + L+ +C R HA L+ + +A+ ++ ++ +G + ++R +F + P
Sbjct: 3 LYMPLFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESY-SQMGSLQSSRLVFYTHPS 61
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV---AVLVACAQLGDLEFG 112
+ ++ +I + E L +F+ + GSK + +V+ A +G+L G
Sbjct: 62 PDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVG 121
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
+ +H +GF + + +L+ MY + L + +VF+ M R +V WSS+I + +
Sbjct: 122 RKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVEN 181
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
MI G++P+ V + V AC +G + +++ + R+ G+V
Sbjct: 182 GVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMRE-GMVGDGSL 240
Query: 233 YGCLVDLLSRAGRLEEAREVI 253
L+ + S+ G L A+ +
Sbjct: 241 SNSLIVMYSQCGYLCRAKRLF 261
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 182/308 (59%), Gaps = 9/308 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS-----KPNEVTVVAVL 100
A LF M Q N+ SW S+I CG EA+ +F++M + +P+ T+V L
Sbjct: 164 AHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTL 223
Query: 101 VACAQLGDLEFGKSVHRFAKG--NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT 158
AC +G L+FG+ VH F + N F ++ V NAL+DMY KCG +EE Y F M+ +
Sbjct: 224 SACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKN 283
Query: 159 VVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALL 217
VVSW+ MI+GFA H M+ + +P+ +TF+ VL ACSH GLVD+GR
Sbjct: 284 VVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYF 343
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
IM RDY I P ++HYGC+VDLL RAG EA E+I +M V N ++W LL CR + N
Sbjct: 344 EIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGN 403
Query: 278 IVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKT-PGCSSI 336
+ L E+ +HL +L+ + YV+++N+YA G+W E+S+ RR M+ R V+K PG S I
Sbjct: 404 VELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEMSKERRSMQERRVRKPEPGNSFI 463
Query: 337 TIDGVVHE 344
I G E
Sbjct: 464 GIPGTRFE 471
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 26/306 (8%)
Query: 2 LLHLYASCGETRH-----ARLMFDKMPQRDIATWNIMI--AHLINVGYVGAARDLFSSMP 54
L++L+ C H AR+ I + I++ A N+ Y A ++F +P
Sbjct: 15 LMNLFNHCSTLNHLKQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNY---ALNVFDKIP 71
Query: 55 QRNVRSWTSVIYGLAKCGM-CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
+ + W ++I G A+ F M+ +P+ T +L A+L + GK
Sbjct: 72 KPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQL-AHRPDNFTFSFILKIIARLRFVNLGK 130
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
+H GF + YV N+LI MY +E +++FE M + +VSW+S+I
Sbjct: 131 QLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCG 190
Query: 174 XXXXXXXXXXXMIR-----VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR---RDYG 225
M++ + ++P++ T + L AC +G +D GR + + +R +G
Sbjct: 191 KYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFG 250
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ + LVD+ ++ G +EEA E +NM N V W ++ G H N EEA+
Sbjct: 251 --ESISVFNALVDMYAKCGAVEEAYETFSNMK-RKNVVSWNVMILGFASHGN---GEEAL 304
Query: 286 RHLSKL 291
+++
Sbjct: 305 ALFTRM 310
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 185/336 (55%), Gaps = 1/336 (0%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
VG AR +F + +++ WT++ G + EE+LK++ ++ KPNE T AV+ A
Sbjct: 495 VGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITA 554
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
+ + L G+ H GF + +V N L+DMY K G +EE ++ F + W
Sbjct: 555 ASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACW 614
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+SMI +A H MI G+KPNYVTF+GVL ACSH GL+D G M +
Sbjct: 615 NSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ 674
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
+GI PG+EHY C+V LL RAG+L EA+E I M + VVW +LL CR+ N+ L
Sbjct: 675 -FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGT 733
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
A + + G YV++SN++A G W V R+R M GV K PGCS I ++ +
Sbjct: 734 YAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEI 793
Query: 343 HEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
H+F+A D H + I + + LL+++K GY+ +T
Sbjct: 794 HKFIAKDTAHRDSAPISLVLDNLLLQIKGFGYMANT 829
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 3/273 (1%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+L + C + H++++ + DI N ++ + V A LF +M +N+ +
Sbjct: 48 LLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVT 107
Query: 61 WTSVIYGLAKCGMCEEALKVFSE-MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
W+S++ C EAL +F + M KPNE + +V+ AC Q G L +H
Sbjct: 108 WSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLV 167
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
G++++VYVC +LID Y K C+++ +F+G++ +T +W+++I G++
Sbjct: 168 VKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSL 227
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M + P+ VL AC + ++ G+ + + R GIV V +D
Sbjct: 228 KLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRS-GIVMDVSMVNGFIDF 286
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
+ +++ R++ M V N V W ++ GC
Sbjct: 287 YFKCHKVQLGRKLFDRM-VDKNVVSWTTVIAGC 318
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 17/305 (5%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ AR LF + + +WT++I G +K G + +LK+F +M++ P++ + +VL A
Sbjct: 192 IDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSA 251
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C L LE GK +H + +G + +V + N ID Y KC ++ G ++F+ M ++ VVSW
Sbjct: 252 CLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSW 311
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+++I G + M R+G P+ VL++C + ++KGR +
Sbjct: 312 TTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQV-----H 366
Query: 223 DYGIVPGVEH----YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
Y I +++ L+D+ ++ L +AR+V N+ + V + A++ G +
Sbjct: 367 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVF-NLMAAIDLVSYNAMIEGYSRQDKL 425
Query: 279 VLAEEAMRH----LSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
A + R LS LL +V + V A E ++I L+ GV
Sbjct: 426 CEALDLFREMRLSLSSPTLL---IFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAG 482
Query: 335 SITID 339
S ID
Sbjct: 483 SALID 487
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 113/249 (45%), Gaps = 8/249 (3%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D++ N I V R LF M +NV SWT+VI G + +AL +F EM
Sbjct: 276 DVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMA 335
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ G P+ +VL +C L LE G+ VH +A + +V N LIDMY KC L
Sbjct: 336 RMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLT 395
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN---YVTFIGVLH 202
+ +VF M +VS+++MI G++ M P +V+ +GV
Sbjct: 396 DARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSA 455
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
+ H+ L ++ L+ YG+ L+D+ S+ R+ +AR V + +
Sbjct: 456 SLYHLELSNQIHGLII----KYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQ-DKDI 510
Query: 263 VVWGALLGG 271
VVW A+ G
Sbjct: 511 VVWTAMFSG 519
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 115/242 (47%), Gaps = 7/242 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F+ M ++ S+ ++I G ++ EAL +F EM S P + V++L A
Sbjct: 397 ARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSAS 456
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L LE +H G + + +ALID+Y KC + + VFE ++++ +V W++M
Sbjct: 457 LYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAM 516
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLT-IMRRDY 224
G+ + +KPN TF V+ A S++ + G+ +++ +
Sbjct: 517 FSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGF 576
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
P V + LVD+ +++G +EEA + + + + W +++ H AE+A
Sbjct: 577 DDDPFVAN--TLVDMYAKSGSIEEAHKAFISTNW-KDTACWNSMIATYAQHGE---AEKA 630
Query: 285 MR 286
++
Sbjct: 631 LQ 632
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + A F S ++ W S+I A+ G E+AL+VF +M +G K
Sbjct: 584 NTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLK 643
Query: 91 PNEVTVVAVLVACAQLGDLEFG----KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
PN VT V VL AC+ G L+ G S+ +F G YVC ++ + + G L E
Sbjct: 644 PNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEH--YVC--MVSLLGRAGKLYE 699
Query: 147 GYRVFEGMR-ERTVVSWSSMI 166
E M ++ V W S++
Sbjct: 700 AKEFIEKMPIKQAAVVWRSLL 720
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 184/333 (55%), Gaps = 1/333 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y G+ A+ FD+MPQR+I +W ++ + V AR +F M +RNV SW
Sbjct: 178 LVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSW 237
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I G + +ALK+F M K ++PN T +VL ACA L G +H
Sbjct: 238 TAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIK 297
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+G +V +L+DMY KCG ++ + VFE +R++ +VSW+++I G+A H
Sbjct: 298 SGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEE 357
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M VG P+ VTF+ VL AC H GLV++G T M YGI +EHY C+VDL
Sbjct: 358 FDRMKVVG-TPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYG 416
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAGR +EA +I NM P+ V+WGALL C LH N+ L E A + +L+ + Y V
Sbjct: 417 RAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSV 476
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
+S + E G W V+ +R MK RG+KK S
Sbjct: 477 LSKIQGEKGVWSSVNELRDTMKERGIKKQTAIS 509
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 144/369 (39%), Gaps = 68/369 (18%)
Query: 2 LLHLYASCGETRHARLMFDK-MPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+++ Y + A + D+ + +I +WN+++ + +G DLF MP ++ S
Sbjct: 14 MINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVS 73
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL---------VACAQLGDLEF 111
W ++ G + E + F +M + G PN+ T+ +L V Q+ L F
Sbjct: 74 WNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAF 133
Query: 112 ----------GKSVHRF--------AKGNGF----LRNVYVCNALIDMYVKCGCLEEGYR 149
G S+ R A G F +++V NAL+ Y++ G +
Sbjct: 134 HLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQT 193
Query: 150 VFEGM-------------------------------RERTVVSWSSMIVGFAMHXXXXXX 178
F+ M ER VVSW++MI G+ +
Sbjct: 194 AFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDA 253
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M + +PN+ TF VL AC+ + G L + + GI V LVD
Sbjct: 254 LKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKS-GIANDVIWLTSLVD 312
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ ++ G ++ A V ++ N V W A++GG H LA A+ ++ ++
Sbjct: 313 MYAKCGDMDAAFGVFESIR-DKNLVSWNAIIGGYASHG---LATRALEEFDRMKVVGTPD 368
Query: 299 YVVMSNVYA 307
V NV +
Sbjct: 369 EVTFVNVLS 377
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 217/388 (55%), Gaps = 12/388 (3%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G A +F++MP+RD+ +WN M+ I G + A LF +MPQ+NV +WT+++
Sbjct: 242 YAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVITWTAMM 301
Query: 66 YGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
G + G+ EEALK+F++M+ DG KP T V VL AC+ L L G+ +H+ F
Sbjct: 302 TGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVF 361
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFE-GMR-ERTVVSWSSMIVGFAMHXXXXXXXXXX 182
+ YV +ALI+MY KCG ++F+ G+ +++W+ MI +A H
Sbjct: 362 QESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLF 421
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M +G + N VT++G+L ACSH GL D+G + ++ I +HY CL+DL R
Sbjct: 422 NKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYTCLIDLCGR 481
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVM 302
AGRL+EA +I + + +WGALL GC +H N + + + K++ N Y++
Sbjct: 482 AGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLKMEPENADTYLLA 541
Query: 303 SNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMW 362
SN+YA G EE + +R MK +G+KK PGCS I + V FV D++H Q FEM
Sbjct: 542 SNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVNDKSHSQ----FEML 597
Query: 363 EKLLV----KMKMKGYIPDTSVVLLDLE 386
+ LL+ KMK + D +L+D+E
Sbjct: 598 KYLLLDLHTKMKKNRDMSDDD-LLVDVE 624
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 52/362 (14%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
Y A +F++MP R++ +WN MI G A DLF MP+RNV SW +V+
Sbjct: 118 YIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVM 177
Query: 66 YGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF 124
LA CG ++A ++F+EM E+D V+ ++ ++ G ++ + V F K
Sbjct: 178 TALAHCGRIDDAERLFNEMRERD-----VVSWTTMVAGLSKNGRVDAAREV--FDKMP-- 228
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+RNV NA+I Y + G +E ++FE M ER + SW++M+ GF +
Sbjct: 229 IRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHA 288
Query: 185 MIRV--------------------------------GMKPNYVTFIGVLHACSHVGLVDK 212
M + G+KP TF+ VL ACS + + +
Sbjct: 289 MPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPE 348
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN-MSVPPNRVVWGALLGG 271
G+ + ++ + L+++ S+ G A+++ + +S + + W ++
Sbjct: 349 GQQIHQMISKTV-FQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAA 407
Query: 272 CRLHKNIVLAEEAMRHLSKLDLL----NDGYYVVMSNVYAEAGKWEE-VSRIRRLMKSRG 326
H EA+ +K+ L ND YV + + AG ++E L+K+R
Sbjct: 408 YAHHG---YGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRY 464
Query: 327 VK 328
++
Sbjct: 465 IQ 466
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 27/291 (9%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM-PQRNVRSWTSVIYGL 68
G+ AR +FD+M +RD W MI+ I G + AR LF Q++V WT+++ G
Sbjct: 59 GKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGY 118
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
K EEA ++F+EM N V+ ++ A+ G + +++ F G RNV
Sbjct: 119 IKMNRIEEAERLFNEM----PVRNVVSWNTMIDGYARNGRTQ--EALDLF--GRMPERNV 170
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IR 187
N ++ CG +++ R+F MRER VVSW++M+ G + + M IR
Sbjct: 171 VSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIR 230
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM-RRDYGIVPGVEHYGCLVDLLSRAGRL 246
N V++ ++ + G D+ L M RD + + +V + G L
Sbjct: 231 -----NVVSWNAMIAGYAQNGRFDEALKLFERMPERD------MPSWNTMVTGFIQNGDL 279
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG 297
A ++ M N + W A++ G H L+EEA++ +K+ NDG
Sbjct: 280 NRAEQLFHAMP-QKNVITWTAMMTGYVQHG---LSEEALKLFNKMQ-ANDG 325
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 107/242 (44%), Gaps = 50/242 (20%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N I+ L G V AR +F M +R+ WT++I G KCG+ EA K+F +
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLF-------DR 101
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+ AQ ++V V A++ Y+K +EE R+
Sbjct: 102 PD-----------AQ--------------------KSVIVWTAMVSGYIKMNRIEEAERL 130
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
F M R VVSW++MI G+A + M + N V++ V+ A +H G +
Sbjct: 131 FNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMP----ERNVVSWNTVMTALAHCGRI 186
Query: 211 DKGRALLTIMR-RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
D L MR RD V + +V LS+ GR++ AREV M + N V W A++
Sbjct: 187 DDAERLFNEMRERD------VVSWTTMVAGLSKNGRVDAAREVFDKMPI-RNVVSWNAMI 239
Query: 270 GG 271
G
Sbjct: 240 AG 241
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 191/326 (58%), Gaps = 2/326 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME-KDGSKPNEVTVVAVLVACA 104
+R +F M RN+ WT++I G + G E AL +F EM+ KD +PN V++V+VL AC
Sbjct: 291 SRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACG 350
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE-GMRERTVVSWS 163
L L GK VH F+ F + + NALIDMY KCG L+ RVF+ G + ++WS
Sbjct: 351 LLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWS 410
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
S+I + +H M++ G+KP+ +T +GVL AC GLVD+G ++ + +
Sbjct: 411 SIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTE 470
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEE 283
Y + P VE GC+VDLL R+G+L++A + I M + P VWG+LL +H N + +
Sbjct: 471 YEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGSLLTASVIHGNSMTRDL 530
Query: 284 AMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVH 343
A R L +L+ N Y+ +SN YA + +W+E++ +R +MK RG++K PG S ITI H
Sbjct: 531 AYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGLRKVPGISWITISDKNH 590
Query: 344 EFVAGDETHPQAKGIFEMWEKLLVKM 369
F D+ HP + I+EM + L+ M
Sbjct: 591 FFTVADKVHPSSSSIYEMLDDLVSIM 616
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 14/262 (5%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEAL-----KV 80
DI N +++ I G A +F MPQRNV S+ +I G A G + +L
Sbjct: 160 DIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNF 219
Query: 81 FSEMEKDGSKPNEVTVVAVL-VACAQLGDLEFGKSVHRFAKGNGF----LRNVYVCNALI 135
F M+ G + TV ++L + C G + G+ +H + NG +V++ ++LI
Sbjct: 220 FRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLI 279
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNY 194
DMY + L RVF+ M+ R + W++MI G+ + M R ++PN
Sbjct: 280 DMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNR 339
Query: 195 VTFIGVLHACS-HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
V+ + VL AC VGL+ + ++ ++ + + L+D+ ++ G L+ AR V
Sbjct: 340 VSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRN--ALIDMYAKCGSLDYARRVF 397
Query: 254 ANMSVPPNRVVWGALLGGCRLH 275
N S + + W +++ LH
Sbjct: 398 DNGSYSKDAITWSSIISAYGLH 419
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 12/267 (4%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
H++++ + Q T ++ A+ G ++ +F S+ +NV W S+I G K
Sbjct: 49 HSQILTNCFSQNAFLTTRLISAY-ATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQ 107
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
+ A+ +F +M + P++ T+ + ++ DL GK +H + GF+ ++ V N+
Sbjct: 108 FDNAIVLFRQMGR-CLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNS 166
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAM-----HXXXXXXXXXXXXMIRV 188
++ MY++C + +VF+ M +R V S++ +I G A + M
Sbjct: 167 VMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQ 226
Query: 189 GMKPNYVTFIGVLH-ACSHVGLVDKGRALLTIMRR---DYGIVPGVEHYGCLVDLLSRAG 244
G + T +L C G D GR L + + D + V L+D+ SR+
Sbjct: 227 GYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSN 286
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGG 271
+L +R V M N VW A++ G
Sbjct: 287 KLVLSRRVFDQMK-SRNIYVWTAMING 312
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 200/366 (54%), Gaps = 5/366 (1%)
Query: 19 FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEAL 78
FD M +I+ N + + + A +F M ++++ SWT+++ +C +AL
Sbjct: 404 FDAM---EISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKAL 460
Query: 79 KVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMY 138
+FS+M +G PN T +V+ AC L LE+G+ +H + +ALIDMY
Sbjct: 461 AIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMY 520
Query: 139 VKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
KCG L E +FE + V+W+++I +A H M + +K N VT +
Sbjct: 521 SKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLL 580
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSV 258
+L ACSH G+V+ G + M YG+VP +EHY C+VDLL R GRL+EA I M +
Sbjct: 581 CILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPI 640
Query: 259 PPNRVVWGALLGGCRLHKNIVLAEEAMRHL--SKLDLLNDGYYVVMSNVYAEAGKWEEVS 316
P+ +VW LLG CR+H N L E A + + ++ + + YV++SN Y E+G E+
Sbjct: 641 EPDEMVWQTLLGACRIHGNAELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGI 700
Query: 317 RIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIP 376
+R +MK RG++K PG S I++ G VH+F A D+ HPQ I+ M E+L ++K P
Sbjct: 701 GLRDVMKERGIRKEPGYSWISVRGEVHKFYARDQQHPQKDKIYTMLEELTRRIKHMHCEP 760
Query: 377 DTSVVL 382
+ S++
Sbjct: 761 EFSLIF 766
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 37/293 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++Y+ CG AR++FD L+N W
Sbjct: 311 LINMYSKCGVLCDARVLFDSK----------FANCLVNA-------------------PW 341
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G ++ G EAL++F+ M ++ KP+ T V + A L L+ K H A
Sbjct: 342 NAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALK 401
Query: 122 NGF-LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
GF + V NAL D YVKC LE G +VF M ++ +VSW++M+ +
Sbjct: 402 CGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALA 461
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDYGIVPGVEHYGCLVDL 239
M G PN+ TF V+ AC + L++ G+ + I + +E L+D+
Sbjct: 462 IFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIE--SALIDM 519
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
S+ G L EA+ + +S P+ V W A++ H L E+A++ K++
Sbjct: 520 YSKCGNLTEAKNIFERIS-NPDTVTWTAIISTYAQHG---LVEDALQLFRKME 568
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
+AR +F M +RNV SWT +I + G AL++F M + G + AVL +C
Sbjct: 121 SARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCV 180
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
L + FG+ VH GFL + V +L+++Y K G E VF M + VSW++
Sbjct: 181 GLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNA 240
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
MI GF + MI G+ PN TF+ + A VGL+ + R Y
Sbjct: 241 MISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKA---VGLLGDINRCHEVHRYAY 297
Query: 225 --GIVPGVEHYGCLVDLLSRAGRLEEAREV----IAN--MSVPPNRVVWGALLGGCRL 274
G+ L+++ S+ G L +AR + AN ++ P N ++ G GC L
Sbjct: 298 EWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHL 355
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 40 VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
+G + ++F++M N SW ++I G G+ +A M ++G PN+ T + +
Sbjct: 217 LGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCI 276
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
A LGD+ VHR+A G N V ALI+MY KCG L + +F+ +
Sbjct: 277 SKAVGLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCL 336
Query: 160 VS--WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
V+ W++MI G++ M + +KP+ TF V ++
Sbjct: 337 VNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNS 382
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 84/197 (42%), Gaps = 12/197 (6%)
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGF--LRNVYVCNALIDMY 138
+ E +PN ++ +L +C Q G L+ +H +GF N+ N ++ Y
Sbjct: 54 LTATETQQKQPNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAY 113
Query: 139 VKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFI 198
KC + +VF+GM ER V SW+ MIV H M+ G+ + F
Sbjct: 114 SKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFS 173
Query: 199 GVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG----CLVDLLSRAGRLEEAREVIA 254
VL +C VGL + M +V G + L++L ++ G E + V
Sbjct: 174 AVLQSC--VGL---DSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFN 228
Query: 255 NMSVPPNRVVWGALLGG 271
NM+ N V W A++ G
Sbjct: 229 NMT-DVNDVSWNAMISG 244
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 42/198 (21%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR-- 59
L+ +Y+ CG A+ +F+++ D TW +I+ G V A LF M Q V+
Sbjct: 516 LIDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKAN 575
Query: 60 --SWTSVIYGLAKCGMCEEALKVFSEME-------------------------------- 85
+ +++ + GM E+ L++F++ME
Sbjct: 576 AVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFI 635
Query: 86 -KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR---FAKGNGFLRNVYVCNALIDMYVKC 141
K +P+E+ +L AC G+ E G++ + + + YV L + Y++
Sbjct: 636 DKMPIEPDEMVWQTLLGACRIHGNAELGETAAQKILSTQPEPEHSSTYV--LLSNTYIES 693
Query: 142 GCLEEGYRVFEGMRERTV 159
G LE+G + + M+ER +
Sbjct: 694 GLLEDGIGLRDVMKERGI 711
>Medtr1g040705.2 | PPR containing plant-like protein | HC |
chr1:15076230-15082956 | 20130731
Length = 613
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 214/401 (53%), Gaps = 14/401 (3%)
Query: 68 LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN 127
+ K G ++A+ V E+EK + + + ++ C + LE K VHR+ +
Sbjct: 225 ICKEGEVKKAIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVHRYVLQHLSPLK 284
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
V CN +++MY +CG +++ VF+ M ER + + MI A + R
Sbjct: 285 VSTCNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKR 344
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
G+KP+ FIGV ACS +G + +G M RDY IVP +EHY +VD++ G L+
Sbjct: 345 SGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEHYVSIVDMIGSIGNLD 404
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD--LLNDGYYVVMSNV 305
EA E I M + P+ VW L+ CR+H N L + + KLD LN+ V + +
Sbjct: 405 EALEFIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSKVSLLLI 464
Query: 306 YAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKL 365
E S I K++ K P + + +HE+ AGD + P+ I+ + +L
Sbjct: 465 --------ETSDI---TKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRL 513
Query: 366 LVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRV 425
V+MK GYI +T L D+ D + KE L HSE+LA+ GL+N+ +IR++KNLRV
Sbjct: 514 RVQMKEAGYIAETRFCLHDV-DQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRV 572
Query: 426 CEDCHAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
C DCH A K++S++ RE ++RD RFH FK+G C+C+DYW
Sbjct: 573 CGDCHTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 613
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
R + + ++T N ++ G V A ++F +M +R++ + +I LAK G E
Sbjct: 274 RYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAE 333
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK-SVHRFAKGNGFLRNVYVCNAL 134
+++ +F++ ++ G KP+ + V AC+ LGD+ G ++ + + ++
Sbjct: 334 DSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEHYVSI 393
Query: 135 IDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
+DM G L+E E M E +V W +++ +H
Sbjct: 394 VDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVH 432
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 209/394 (53%), Gaps = 36/394 (9%)
Query: 2 LLHLYASCGETRHARLMFDK--MPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
L+ +YA G R A L+F++ RD ATWN +IA
Sbjct: 466 LIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIA------------------------ 501
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
G + G+ E+A+ + +M PN VT+ ++L AC+ +G + + +H F+
Sbjct: 502 -------GYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFS 554
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+NVYV +L D Y KCG + VF E+ V++++M++ + H
Sbjct: 555 IRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRAL 614
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+R G++P+ VTF+ +L AC++ GLVD+G + M + + I P +EHY C+ D+
Sbjct: 615 TLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADM 674
Query: 240 LSRAGRLEEAREVIANMSVPPNRV-VWGALLGGCRLHKNIVLAEEAMRHLSK--LDLLND 296
L R GR+ EA E + + N + +WG+LLG CR H + L + + L +D
Sbjct: 675 LGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMA 734
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAK 356
GY+V++SN+YAE G+WE+V R+R+ MK +G+ K GCS + I G V+ FV+ DE HPQ+
Sbjct: 735 GYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKHPQSS 794
Query: 357 GIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQ 390
I+ M + L + MK GY P S+ L + D+ +
Sbjct: 795 EIYYMLDMLTLDMKYAGYKPQYSLNLNTILDSDE 828
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 5/246 (2%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
E HA + +P I N ++ +V + +F M +R+ SW ++I
Sbjct: 344 AEQFHA-FVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFV 402
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ G EEAL + EM+K + VT A+L A + L +L GK H + G ++
Sbjct: 403 QNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRG-IQFEG 461
Query: 130 VCNALIDMYVKCGCLEEGYRVFEG--MRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
+ + LIDMY K G + +FE +R +W+++I G+ + M+
Sbjct: 462 MESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLV 521
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
+ PN VT +L ACS +G + R L R + + V L D S+ G +
Sbjct: 522 QNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRF-LEKNVYVGTSLTDTYSKCGAIS 580
Query: 248 EAREVI 253
A V
Sbjct: 581 YAENVF 586
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 10 GETRHARLMFDKMPQ------RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTS 63
G++R ++ + M + D+ + I +VG + AR +F +N W +
Sbjct: 235 GDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNT 294
Query: 64 VIYGLAKCGMCEEALKVFSE-MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
+I + EA+ VF + +E + ++VT+++VL A +QL ++ + H F +
Sbjct: 295 MIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKS 354
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
+ + NA++ MY +C ++ +VF+ M ER VSW+++I F +
Sbjct: 355 LPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLV 414
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M + + VT +L A S++ + G+ + R G+E Y L+D+ ++
Sbjct: 415 CEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESY--LIDMYAK 472
Query: 243 AGRLEEAREVI-ANMSVPPNRVVWGALLGG 271
+G + A + N S ++ W A++ G
Sbjct: 473 SGSIRTAELLFEQNCSSDRDQATWNAIIAG 502
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 15/234 (6%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVAC 103
A L S+P+ + W SVI G + +AL ++++M + S + T + L AC
Sbjct: 68 ALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKAC 127
Query: 104 AQLGDLEFGKSVHRF------AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
A D+ GK++H G R VY N+L++MY C E VF+ MR R
Sbjct: 128 ALTKDILTGKAIHSHFLRSHSNTNTGPSRIVY--NSLLNMYASCQH-EYALNVFDVMRRR 184
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
VV+W+++I+ F MI + P+ VTF+ + A S +G +
Sbjct: 185 NVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFY 244
Query: 218 TIMRRDYG--IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
MR+ +G V V + + S G ++ AR V + + N +W ++
Sbjct: 245 GFMRK-FGDQYVSDVFVVSSAILMFSDVGCMDYARMVF-DRCLNKNTEIWNTMI 296
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A ++F M +RNV +W ++I K +A++ F+ M P+ VT V + A ++
Sbjct: 174 ALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSK 233
Query: 106 LGDLEFGKSVHRFAK--GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
LGD K + F + G+ ++ +V+V ++ I M+ GC++ VF+ + W+
Sbjct: 234 LGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWN 293
Query: 164 SMIVGFAMH 172
+MIV + +
Sbjct: 294 TMIVAYVQN 302
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 190/314 (60%), Gaps = 8/314 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G++ AR+LF+ MP+RN+ +W +I + EAL +F M +G P++ T ++VL
Sbjct: 264 GWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVL 323
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEG-MRERTV 159
CA+ L G++VH + + +++ + AL+DMY K G L ++F + ++ V
Sbjct: 324 SVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDV 383
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIR-VGMKPNYVTFIGVLHACSHVGLVDKGRALLT 218
V W+SMI A+H M + P+++T+IGVL ACSHVGLV++ +
Sbjct: 384 VMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFN 443
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+M + YGI+P EHY C+VDLLSRAG EA +++ MS+ PN +WGALL GC++H+NI
Sbjct: 444 LMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIHENI 503
Query: 279 VLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+A + L++L+ + G Y ++SN+YA +GKWEEV+R R++MK + + KT G SS+ +
Sbjct: 504 PVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEEVNRTRKMMKHKRIAKTIGHSSVEM 563
Query: 339 DGVVHEFVAGDETH 352
V+ DET
Sbjct: 564 K------VSSDETQ 571
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 8/234 (3%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F +P+ NV +WT +I G EAL+VF EM + G + NEVT+V L+ACA+ D
Sbjct: 164 VFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRD 223
Query: 109 LEFGKSVHRFAKGNGF-------LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
++ G+ VH G+ NV + A+++MY KCG L +F M ER +V+
Sbjct: 224 VDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVA 283
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
W+ MI + + M+ G P+ TF+ VL C+ ++ G + +
Sbjct: 284 WNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLL 343
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ + + L+D+ ++ G L A+++ N + V+W +++ +H
Sbjct: 344 KS-NMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIH 396
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 42 YVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLV 101
Y A LF + NV + S+I G AK +L ++ +M ++G P+ T VL
Sbjct: 56 YFNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLK 115
Query: 102 ACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS 161
AC+ + D GK VH +GF NVYV L++MYV+C +E G +VF+ + + VV+
Sbjct: 116 ACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVA 175
Query: 162 WSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
W+ +I G+ ++ M R G++ N VT + L AC+ VD GR + +
Sbjct: 176 WTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVC 235
Query: 222 RD------YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + V +V++ ++ G L ARE+ M N V W ++
Sbjct: 236 KAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMP-ERNIVAWNCMINA 290
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 211/376 (56%), Gaps = 11/376 (2%)
Query: 5 LYASCGE---TRHARLMFDKMPQR----DIATWNIMIAHLINVGYVGAARDLFSSMP--- 54
+ A+C E + A +F +M ++ +WN +I G V A+D+FS M
Sbjct: 489 MLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSG 548
Query: 55 -QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
N+ +WT++I GLA+ G+ EA +VF +M+ G +PN +++ + L AC + L +G+
Sbjct: 549 VTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGR 608
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
S+H + N ++ + ++IDMY KCG L++ VF + + +++MI +A H
Sbjct: 609 SIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHG 668
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
+++ G+ P+++TF VL ACSH L+ +G L M + + P +HY
Sbjct: 669 KSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHY 728
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
GCLV LL+ G+L+EA +I M PP+ + G+LL C + LA + L K++
Sbjct: 729 GCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEP 788
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHP 353
N G YV +SNVYA GKW+EVS IR MK +G+KK PGCS I + ++ F+A D++HP
Sbjct: 789 NNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHP 848
Query: 354 QAKGIFEMWEKLLVKM 369
+ + I+++ + L +M
Sbjct: 849 EKEEIYKILDLLGFEM 864
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 12/225 (5%)
Query: 55 QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKS 114
+N+ S+ +++ A+ G+ +EAL + EM + G P+ V L AC L + FG+
Sbjct: 169 NQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRG 228
Query: 115 VHRFA--KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFA 170
+H F GN F VYV +L+DMY KCG LE+ +VF+ M R+R V W+SMIVG+
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYV 288
Query: 171 MHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGR---ALLTIMRRDYGI 226
+ M G++P+ V+ G AC+++ V++G+ AL+ +M +
Sbjct: 289 QNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNY 348
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
V G +++ S+ G +EE V +M+V + V W ++
Sbjct: 349 VLG----SSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISS 389
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 147/378 (38%), Gaps = 77/378 (20%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y CG A +FD+MP R +RN W
Sbjct: 250 LVDMYGKCGVLEDAEKVFDEMPNR-----------------------------KRNDVVW 280
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
S+I G + GM EA+ +F +M +G +P+EV++ ACA L +E GK H
Sbjct: 281 NSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVI 340
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE-RTVVSWSSMI---VGFAMH---- 172
GF N + +++++ Y K G +EE VF M + V+W+ MI V F M
Sbjct: 341 LMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKAL 400
Query: 173 ------------------XXXXXXXXXXXXMIRVGMK-----------PNYVTFIGVLHA 203
+++G K + GVL
Sbjct: 401 EMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDM 460
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPP 260
+ G++D R + + IV + ++ + G EA ++ M SVPP
Sbjct: 461 YAKCGIMDCARGVFHFAGKKKDIV----LWNTMLAACAEKGLSGEALKLFFQMQMESVPP 516
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL-NDGYYVVMSNVYAEAGKWEEVSRIR 319
N V W +L+ G + +V A++ + + N + M + A+ G E SR+
Sbjct: 517 NVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVF 576
Query: 320 RLMKSRGVKKTPGCSSIT 337
+ M+ G++ P SIT
Sbjct: 577 QQMQGAGMR--PNSISIT 592
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 111/239 (46%), Gaps = 7/239 (2%)
Query: 40 VGYVGAARDLFSSMP-QRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVV 97
VG + +F SM ++ +W +I + GM E+AL++ M E++ + + VT+
Sbjct: 361 VGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLS 420
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE-GMRE 156
++L A D++ GK +H F N F ++ V + ++DMY KCG ++ VF ++
Sbjct: 421 SLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKK 480
Query: 157 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
+ +V W++M+ A M + PN V++ ++ G V + + +
Sbjct: 481 KDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDM 540
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGC 272
+ M+ G+ P + + ++ L++ G EA V M + PN + + L C
Sbjct: 541 FSEMQLS-GVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSAC 598
>Medtr1g040705.1 | PPR containing plant-like protein | HC |
chr1:15076249-15083015 | 20130731
Length = 702
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 210/397 (52%), Gaps = 14/397 (3%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G +EA+ V +EK + + ++ C + LE K VHR+ + V C
Sbjct: 318 GEVKEAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTC 377
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N +++MY +CG +++ VF+ M ER + + MI A + R G+K
Sbjct: 378 NGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLK 437
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ FIGV ACS +G + +G M RDY IVP +EHY +VD++ G L+EA E
Sbjct: 438 PDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEHYVSIVDMIGSIGNLDEALE 497
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD--LLNDGYYVVMSNVYAEA 309
I M + P+ VW L+ CR+H N L + + KLD LN+ V + +
Sbjct: 498 FIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSKVSLLLI---- 553
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
E S I K++ K P + + +HE+ AGD + P+ I+ + +L V+M
Sbjct: 554 ----ETSDI---TKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQM 606
Query: 370 KMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDC 429
K GYI +T L D+ D + KE L HSE+LA+ GL+N+ +IR++KNLRVC DC
Sbjct: 607 KEAGYIAETRFCLHDV-DQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDC 665
Query: 430 HAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
H A K++S++ RE ++RD RFH FK+G C+C+DYW
Sbjct: 666 HTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 3 LHLYASCGETRH-------ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
L L CG+T+ R + + ++T N ++ G V A ++F +M +
Sbjct: 343 LRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMNE 402
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK-S 114
R++ + +I LAK G E+++ +F++ ++ G KP+ + V AC+ LGD+ G
Sbjct: 403 RDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLH 462
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
++ + + +++DM G L+E E M E +V W +++ +H
Sbjct: 463 FESMSRDYEIVPTMEHYVSIVDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVH 521
>Medtr1g040705.3 | PPR containing plant-like protein | HC |
chr1:15076249-15080305 | 20130731
Length = 713
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 210/397 (52%), Gaps = 14/397 (3%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G +EA+ V +EK + + ++ C + LE K VHR+ + V C
Sbjct: 329 GEVKEAIDVLQVLEKFHIHVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTC 388
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N +++MY +CG +++ VF+ M ER + + MI A + R G+K
Sbjct: 389 NGILEMYFQCGSVDDAVNVFKNMNERDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLK 448
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ FIGV ACS +G + +G M RDY IVP +EHY +VD++ G L+EA E
Sbjct: 449 PDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYEIVPTMEHYVSIVDMIGSIGNLDEALE 508
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD--LLNDGYYVVMSNVYAEA 309
I M + P+ VW L+ CR+H N L + + KLD LN+ V + +
Sbjct: 509 FIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSKVSLLLI---- 564
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
E S I K++ K P + + +HE+ AGD + P+ I+ + +L V+M
Sbjct: 565 ----ETSDI---TKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQM 617
Query: 370 KMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDC 429
K GYI +T L D+ D + KE L HSE+LA+ GL+N+ +IR++KNLRVC DC
Sbjct: 618 KEAGYIAETRFCLHDV-DQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDC 676
Query: 430 HAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
H A K++S++ RE ++RD RFH FK+G C+C+DYW
Sbjct: 677 HTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 713
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 3 LHLYASCGETRH-------ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
L L CG+T+ R + + ++T N ++ G V A ++F +M +
Sbjct: 354 LRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMNE 413
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK-S 114
R++ + +I LAK G E+++ +F++ ++ G KP+ + V AC+ LGD+ G
Sbjct: 414 RDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLH 473
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
++ + + +++DM G L+E E M E +V W +++ +H
Sbjct: 474 FESMSRDYEIVPTMEHYVSIVDMIGSIGNLDEALEFIEKMPMEPSVEVWETLMNSCRVH 532
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 199/350 (56%), Gaps = 2/350 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY A+ F+ ++ ++ +I + G A +F+ MP+RNV SW
Sbjct: 201 LVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMPERNVISW 260
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-K 120
+++ G +K G EEA+K F +M ++G PNE T + A + + L FG+S H A K
Sbjct: 261 NAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFGRSFHACAIK 320
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
G L N +V N+LI Y KCG +++ +F+ + +R VVSW+++I G+A +
Sbjct: 321 FLGKL-NDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAIS 379
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M G+KPN V+ +G+L AC+H GLVD+G R + + EHY C+VDLL
Sbjct: 380 LFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLKPEHYACMVDLL 439
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
+R+GR EA+ I M P W A+LGGC++H NI L E A +++ LD + YV
Sbjct: 440 ARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGELAAKNILALDPDDVSSYV 499
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDE 350
+MSN ++ AG+W +V+R+R ++ +G+K+ PG S I + G VH F+ DE
Sbjct: 500 MMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWIEVKGKVHAFLKADE 549
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 140/353 (39%), Gaps = 74/353 (20%)
Query: 46 ARDLFSSMPQR-NVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
A ++F MP+ V T +I +K E+A+ +FS M +PNE T VL
Sbjct: 112 ACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTST 171
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE------------------ 146
+LG + GK +H A NV+V +AL+D+YVK +EE
Sbjct: 172 RLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTT 231
Query: 147 ---GY----------RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
GY RVF M ER V+SW++M+ G + M+R G PN
Sbjct: 232 LIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPN 291
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYG---------IVPGVEHYGCLVDLL---- 240
TF + A S++ + GR+ + G ++ G + D L
Sbjct: 292 ESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFD 351
Query: 241 -----------------SRAGRLEEAREVIANM---SVPPNRVVWGALLGGCRLHKNIVL 280
+ GR EA + M + PN+V LL C H +V
Sbjct: 352 KICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACN-HAGLV- 409
Query: 281 AEEAMRHLSKL-----DLLNDGYYVVMSNVYAEAGKWEEVSR-IRRLMKSRGV 327
+E + +K +LL +Y M ++ A +G++ E IRR+ + G+
Sbjct: 410 -DEGFLYFNKARIESPNLLKPEHYACMVDLLARSGRFTEAQNFIRRMPFNPGI 461
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 203/354 (57%), Gaps = 4/354 (1%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
+ + G+ HAR++ D+ N + G++ AR++F+ + V S+ +I
Sbjct: 454 FLNVGKEIHARII-QTGCATDLFLSNALTDMYSKCGHLSLARNVFNVSIKDKV-SYNILI 511
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G ++ E+L +FSEM G P+ V+ + ++ ACA L ++ GK +H F
Sbjct: 512 IGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFH 571
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM 185
+++ N+L+D+Y KCG ++ +VF+ ++ + V SW++MI+G+ M M
Sbjct: 572 THLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAM 631
Query: 186 IRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
G ++ + V++I VL ACSH GL++KG M+ DY I P HY C+VDLL RAG
Sbjct: 632 KEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQ-DYNIEPTHTHYACMVDLLGRAG 690
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
++EEA +I +S P+ +WGALLG CR++ N+ L A HL KL + GYY+++SN
Sbjct: 691 QIEEAANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLFKLKPDHCGYYILLSN 750
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
+YAEAG+W+E + +R LMKSRG KK PGCS + I VH F+ G++ G
Sbjct: 751 MYAEAGRWDEANMVRELMKSRGAKKNPGCSWVQIGDQVHGFLVGEKIESLDTGF 804
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 6/249 (2%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
A + +F M +RN SW +VI G + G+ +AL F M G +PN VT+ ++L
Sbjct: 290 ACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLG 349
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+LG + G VH ++ G ++++ N+LIDMY K G +F M +R +VSW+S
Sbjct: 350 ELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNS 409
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
M+ FA + M G PN VTF VL AC+ +G ++ G+ + + +
Sbjct: 410 MVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQT- 468
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
G + L D+ S+ G L AR V N+S+ ++V + L+ G N + E+
Sbjct: 469 GCATDLFLSNALTDMYSKCGHLSLARNVF-NVSI-KDKVSYNILIIGYSQTTN---SSES 523
Query: 285 MRHLSKLDL 293
+ S++ L
Sbjct: 524 LNLFSEMRL 532
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 7/310 (2%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ DI N +I G A +F+ M RN+ SW S++ A+ A+++ +
Sbjct: 370 ESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQ 429
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M+ G PN VT VL ACA+LG L GK +H G ++++ NAL DMY KCG
Sbjct: 430 MQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGH 489
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
L VF + + VS++ +I+G++ M GM P+ V+FIG++ A
Sbjct: 490 LSLARNVFN-VSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISA 548
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
C+H+ + +G+ + + R + L+DL ++ GR++ A +V + +
Sbjct: 549 CAHLSSIKQGKEIHGHLVRKL-FHTHLFAANSLLDLYTKCGRIDLATKVFDRIQ-HKDVA 606
Query: 264 VWGALLGGCRLHKNIVLA---EEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
W ++ G + A EAM+ ++ + Y V+S + G E+ ++ +
Sbjct: 607 SWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSAC-SHGGLIEKGNKYFK 665
Query: 321 LMKSRGVKKT 330
M+ ++ T
Sbjct: 666 QMQDYNIEPT 675
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 8/275 (2%)
Query: 16 RLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
++ FDK D+ N ++ N G+ A ++F M +R+ SW +VI + G E
Sbjct: 162 KVGFDK----DVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHE 217
Query: 76 EALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
E+L F EM +P+ VTVV+VL CA ++ + VH + G +V V NA
Sbjct: 218 ESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNA 277
Query: 134 LIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPN 193
L+D+Y KCG E +VF+ M ER VSW+++I GF+ MI GM+PN
Sbjct: 278 LVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPN 337
Query: 194 YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
VT +L +GL G + R GI + L+D+ +++G A +
Sbjct: 338 PVTISSMLPVLGELGLFKLGMEVHGYSLR-MGIESDIFIGNSLIDMYAKSGSSRVASTIF 396
Query: 254 ANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
M N V W +++ +++ A E +R +
Sbjct: 397 NKMG-DRNIVSWNSMVANFAQNRHHFAAVELLRQM 430
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 5/230 (2%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W ++I + G + V++ M + G KP++ T VL AC+ + G+ VH
Sbjct: 103 WNTLIRAYSIAGFFD-GFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHGVVF 161
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
GF ++V+V N L+ Y CG + VF+ M ER VSW+++I +
Sbjct: 162 KVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLC 221
Query: 181 XXXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M+ ++P+ VT + VL C+ V R + + + G+ V+ LVD
Sbjct: 222 FFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFK-VGLSGHVKVGNALVD 280
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
+ + G E ++V M N V W A++ G + A +A R +
Sbjct: 281 VYGKCGSEEACKKVFDEMD-ERNEVSWNAVITGFSFRGLSMDALDAFRSM 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 55/178 (30%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL LY CG A +FD++ +D+A+WN MI
Sbjct: 580 LLDLYTKCGRIDLATKVFDRIQHKDVASWNTMI--------------------------- 612
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+ YG+ G E A+ +F M++DG + + V+ +AVL AC+ G +E K
Sbjct: 613 --LGYGMR--GEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIE---------K 659
Query: 121 GNGFLRNV-----------YVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
GN + + + Y C ++D+ + G +EE + G+ E W +++
Sbjct: 660 GNKYFKQMQDYNIEPTHTHYAC--MVDLLGRAGQIEEAANLIRGLSFEPDANIWGALL 715
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/268 (44%), Positives = 166/268 (61%), Gaps = 1/268 (0%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
CG+ A +F++MP R++ +WN M+A + G + AR +F M R+ SW+++I G
Sbjct: 192 CGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGF 251
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNV 128
AK G +A F E+ +D ++P+EV++ VL ACAQ G EFGK +H F + GFL V
Sbjct: 252 AKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIV 311
Query: 129 YVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
V NALID Y KCG ++ VF+ M E+ +VSW+SMI AMH M
Sbjct: 312 SVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEE 371
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
G++P+ VTFI +L+ACSH GLV++G AL + MR YGI P +EHYGC+VDL RA RL+
Sbjct: 372 SGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQ 431
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLH 275
+A E I M + PN ++W LLG C +H
Sbjct: 432 KAYEFIRQMPILPNVIIWRTLLGACSIH 459
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 12/231 (5%)
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T++I A+CG E A KVF EM S+PN V AV+ AC + GD+E +
Sbjct: 152 TTLISMYAECGCYEYARKVFDEM----SQPNVVAWNAVVTACFRCGDVEGAWGLFERMP- 206
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
+RN+ N ++ YVK G L RVF M+ R SWS+MIVGFA
Sbjct: 207 ---VRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGF 263
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
++R +P+ V+ GVL AC+ G + G+ L M + G + V L+D S
Sbjct: 264 FKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKA-GFLCIVSVNNALIDTYS 322
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
+ G ++ A+ V +MS V W +++ +H A+EA+R +++
Sbjct: 323 KCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGR---ADEAIRVFHEME 370
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 202/362 (55%), Gaps = 34/362 (9%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G+ A +F +MP+R+ A+WN MI ++ G + AR+LF +MP+RN S ++I
Sbjct: 211 YAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSLITMI 270
Query: 66 YGLAKCGMCEEALKVFSEM-EKD-------------GSKPNE------------------ 93
G +K G A ++F +M +KD SKP E
Sbjct: 271 AGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPD 330
Query: 94 -VTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+T+ +V+ AC+QLG+LE + + G + + ++ ALID+Y KCG +++ Y +F
Sbjct: 331 KMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFH 390
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
G+R+R VV++S+MI G ++ M + PN VT+ G+L A +H GL ++
Sbjct: 391 GLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEE 450
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
G M +D GIVP V+HYG +VDLL RAG L+EA ++I M + PN VWGALL C
Sbjct: 451 GYRCFISM-KDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLAC 509
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
RLH N+ L E A++H KL+ GYY ++S +YA GKW + ++ ++ + + K PG
Sbjct: 510 RLHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYATVGKWNDAKKLTTGVEGKKIIKIPG 569
Query: 333 CS 334
CS
Sbjct: 570 CS 571
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 160/343 (46%), Gaps = 17/343 (4%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL LY G+ AR +FD+MP +++ +WN +++ I G + + F +P ++V SW
Sbjct: 145 LLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISW 204
Query: 62 TSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDL-EFGKSVHRFA 119
++ G AK G + A +F +M E++ + N T++ V C + + E ++ R
Sbjct: 205 NCMVSGYAKAGKMDRACYLFQQMPERNFASWN--TMITGYVDCGSIVEARELFDAMPR-- 260
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
RN +I Y K G + +F+ M ++ ++S+++MI +A
Sbjct: 261 ------RNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEAL 314
Query: 180 XXXXXMIR--VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV 237
M++ + P+ +T V+ ACS +G ++ R + + + ++GIV L+
Sbjct: 315 DLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQI-NNFGIVLDDHLATALI 373
Query: 238 DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS-KLDLLND 296
DL ++ G +++A E+ + + V + A++ GC ++ A E ++ + + N
Sbjct: 374 DLYAKCGSIDKAYELFHGLR-KRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNL 432
Query: 297 GYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
Y + Y AG EE R MK G+ + I +D
Sbjct: 433 VTYTGILTAYNHAGLAEEGYRCFISMKDNGIVPSVDHYGIMVD 475
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%)
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
SW VI ++ G EA+ ++ +M + G P+ V ++L +CA++ D G +H
Sbjct: 71 SWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHV 130
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
GF VYV AL+D+Y K G + +VF+ M ++ VVSW+S++ G+
Sbjct: 131 HKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGY 180
>Medtr2g082550.1 | PPR containing plant-like protein, putative | HC
| chr2:34637734-34634734 | 20130731
Length = 631
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 224/450 (49%), Gaps = 71/450 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L++LYA C R A +FD MP RD+ +W+ ++ + N Y LFS M + V +
Sbjct: 203 LVNLYAKCLCVREAHAIFDLMPHRDVVSWSGVLTYFTNKEY-EKGLSLFSQMCRDGVET- 260
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
V + +A+++ +M+ G KPNE+T+ ++L AC L K +H +
Sbjct: 261 NEVTW---------KAMEMLRKMQNMGFKPNEITISSILQACYLSESLRMCKEIHYYV-- 309
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
R+ V N VF+ + + VV+W++MI AMH
Sbjct: 310 ---FRHWKVWN-----------------VFDMIAIKDVVAWTTMINANAMHGNGKEALFL 349
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M+ +KP+ VTFI VL +CSH LV++G + M +D+ + P HY C+VD+ S
Sbjct: 350 FEKMLLSMVKPDSVTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYS 409
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAGRL EA E I M + P W +LL GCR++KN+ LA+ + + L +++ YV
Sbjct: 410 RAGRLNEAYEFIQRMPMGPTAGAWKSLLAGCRVYKNVELAKISAKKLFEIEPSRSRDYVA 469
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEM 361
+ N+ A W E S+IR MK G+ KTPGCS + + VH FVAGD+
Sbjct: 470 LCNILVTAKLWSEASKIRMFMKESGITKTPGCSWLHVGNRVHNFVAGDK----------- 518
Query: 362 WEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMK 421
K+K L +HSEKLA+ +G++N +IR+ K
Sbjct: 519 ---------------------------KEKVESLCKHSEKLAVAFGILNLNGQSTIRVFK 551
Query: 422 NLRVCEDCHAAFKLVSEIENREIVVRDRNR 451
NLR+C DCH A K ++++ + IVVRD R
Sbjct: 552 NLRICGDCHNAIKYMAKVVDVMIVVRDSFR 581
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 23/239 (9%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
++ ++V AR LF ++PQ + + +++I L G+ EA+ + + + + G K +
Sbjct: 18 LLKEALDVRNFKRARQLFDNIPQPDPTTSSTLISALTTHGLLNEAINICTSLRERGIKLD 77
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+AV ACA D K +H A G + NV+V NALI Y KC C+E RVF+
Sbjct: 78 IPVFMAVAKACAASRDALNVKELHNDATRCGAMFNVFVGNALIHAYGKCKCVEGERRVFD 137
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
M R V + M G+K + VT +L AC+ + +
Sbjct: 138 DMVVRDVKGLNVF-----------------HEMGWNGVKLDPVTVSSILPACADLKDLKS 180
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALL 269
G+A+ R+ G+V V LV+L ++ + EA + M P+R V W +L
Sbjct: 181 GKAIHGFAVRN-GMVENVFVCNALVNLYAKCLCVREAHAIFDLM---PHRDVVSWSGVL 235
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 209/376 (55%), Gaps = 2/376 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ +YA CG +AR +FD+M ++D ++ +I+ + G+V A D+ + + +W
Sbjct: 300 IIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTW 359
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
VI G+ + E AL + EM G KPN VT+ +++ + +L K VH +A
Sbjct: 360 NDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYA 419
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ +N+YV A++D Y K G + RVF+ + R+++ W+S+I +A H
Sbjct: 420 IRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASLAL 479
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+ G++P+ VT VL AC+H GLV++ + M +GI P VEHY C+V +
Sbjct: 480 GLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACMVGV 539
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
LSRAG+L EA + I+ M P VWGALL G ++ ++ + + A HL +++ + G Y
Sbjct: 540 LSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDVEIGKFACDHLFEIEPEHTGNY 599
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
++M+N+Y+ AG+WEE +IR M+ G K G S I G + F+A D ++ + I+
Sbjct: 600 IIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWIETSGKLLGFIAKDMSNEMSDEIY 659
Query: 360 EMWEKLLVKMKMKGYI 375
+ + LL M+ +GYI
Sbjct: 660 ALLKGLLGLMREEGYI 675
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 3/150 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM- 84
D+ N ++ G + AR +F M +R++ +W ++I G ++ G EE +++ EM
Sbjct: 189 DVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEML 248
Query: 85 --EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
E G PN VT+ +V+ AC Q DL FG VHRF K +G +V++CNA+I MY KCG
Sbjct: 249 GLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCG 308
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
L +F+ M E+ VS+ S+I G+ ++
Sbjct: 309 SLNYARELFDEMGEKDEVSYRSIISGYMIN 338
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Query: 10 GETRHARLM-FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
G+ HAR F P IAT +I + AR++F +P +N SW S+I
Sbjct: 68 GKQLHARFFPFAITPDNFIAT--KLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIAY 125
Query: 69 AKCGMCEEALKVFSEM---EKDGSKPNEVTVVAVLVACAQLGDLEF--GKSVHRFAKGNG 123
+ +AL +F+ + P+ T+ ++L A + + K +H A G
Sbjct: 126 TSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALLRG 185
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
F +V V NAL+ Y +CG +E +VF+ M ER +V+W++MI G++
Sbjct: 186 FYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYL 245
Query: 184 XMIRV---GMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ + G+ PN VT V+ AC + G + M+ D GI V ++ +
Sbjct: 246 EMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDD-GIETDVFLCNAIIAMY 304
Query: 241 SRAGRLEEAREVIANM 256
++ G L ARE+ M
Sbjct: 305 AKCGSLNYARELFDEM 320
>Medtr5g042450.1 | PPR containing plant-like protein | HC |
chr5:18668534-18660865 | 20130731
Length = 702
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 210/397 (52%), Gaps = 14/397 (3%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G +EA+ V +EK + + ++ C + LE K VHR+ + V C
Sbjct: 318 GEVKEAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTC 377
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N +++MY +CG +++ VF+ M ER + + MI A + R G+K
Sbjct: 378 NGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGLK 437
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ FIGV ACS +G + +G M RDY IVP +EHY LVD++ G L+EA E
Sbjct: 438 PDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEHYVSLVDMIGSIGHLDEALE 497
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD--LLNDGYYVVMSNVYAEA 309
I M + P+ VW L+ CR+H N L + + KLD LN+ V + +
Sbjct: 498 FIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSKVGLLLI---- 553
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
E S I K++ K P + + +HE+ AGD + P+ I+ + +L V+M
Sbjct: 554 ----ETSDI---TKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYVLLRRLRVQM 606
Query: 370 KMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDC 429
K GYI +T L D+ D + KE L HSE+LA+ GL+N+ +IR++KNLRVC DC
Sbjct: 607 KEAGYIAETRFCLHDV-DQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDC 665
Query: 430 HAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
H A K++S++ RE ++RD RFH FK+G C+C+DYW
Sbjct: 666 HTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 3 LHLYASCGETRH-------ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
L L CG+T+ R + + ++T N ++ G V A ++F +M +
Sbjct: 343 LRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMTE 402
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK-S 114
R++ + +I LAK G E+++ +F++ ++ G KP+ + V AC+ LGD+ G
Sbjct: 403 RDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLH 462
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
++ + + +L+DM G L+E E M E +V W +++ +H
Sbjct: 463 FESMSRDYDIVPTMEHYVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVH 521
>Medtr5g042450.2 | PPR containing plant-like protein | HC |
chr5:18668534-18660865 | 20130731
Length = 702
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 210/397 (52%), Gaps = 14/397 (3%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G +EA+ V +EK + + ++ C + LE K VHR+ + V C
Sbjct: 318 GEVKEAIDVLQVLEKFHILVDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTC 377
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N +++MY +CG +++ VF+ M ER + + MI A + R G+K
Sbjct: 378 NGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGLK 437
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ FIGV ACS +G + +G M RDY IVP +EHY LVD++ G L+EA E
Sbjct: 438 PDGQMFIGVFGACSMLGDIVEGMLHFESMSRDYDIVPTMEHYVSLVDMIGSIGHLDEALE 497
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD--LLNDGYYVVMSNVYAEA 309
I M + P+ VW L+ CR+H N L + + KLD LN+ V + +
Sbjct: 498 FIEKMPMEPSVEVWETLMNSCRVHGNTELGDRCAELVEKLDPSRLNEKSKVGLLLI---- 553
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
E S I K++ K P + + +HE+ AGD + P+ I+ + +L V+M
Sbjct: 554 ----ETSDI---TKNKKQNKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYVLLRRLRVQM 606
Query: 370 KMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDC 429
K GYI +T L D+ D + KE L HSE+LA+ GL+N+ +IR++KNLRVC DC
Sbjct: 607 KEAGYIAETRFCLHDV-DQEDKEDALLGHSERLAIAKGLLNSPARSTIRVIKNLRVCGDC 665
Query: 430 HAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
H A K++S++ RE ++RD RFH FK+G C+C+DYW
Sbjct: 666 HTALKIISDLVGREFIIRDAKRFHHFKNGLCSCRDYW 702
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 3 LHLYASCGETRH-------ARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ 55
L L CG+T+ R + + ++T N ++ G V A ++F +M +
Sbjct: 343 LRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNVFKNMTE 402
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK-S 114
R++ + +I LAK G E+++ +F++ ++ G KP+ + V AC+ LGD+ G
Sbjct: 403 RDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLGDIVEGMLH 462
Query: 115 VHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
++ + + +L+DM G L+E E M E +V W +++ +H
Sbjct: 463 FESMSRDYDIVPTMEHYVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVWETLMNSCRVH 521
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/320 (40%), Positives = 188/320 (58%), Gaps = 1/320 (0%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
DI N ++ + G + R LF MPQR+V SWT +I G G +AL VF +M
Sbjct: 142 NDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQM 201
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ G PN VT+V L ACA +E G + + NG+ +V + ALIDMYVKCG +
Sbjct: 202 QYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRV 261
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
EEG +VF M+E+ V + + +I G A+ M G++ + VT + VL AC
Sbjct: 262 EEGLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSAC 321
Query: 205 SHVGLVDKGRALLTIM-RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
SH GLV+KGR + +++ YG +P V+HY C+VDLL+RAG+L+EA ++I M P
Sbjct: 322 SHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAA 381
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
+WG+LL G + ++ +E A L +L+ N YYV +SN+YAEAG+W +V RIR +MK
Sbjct: 382 MWGSLLLGSKSRDDLEFSEFAATKLVELEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMK 441
Query: 324 SRGVKKTPGCSSITIDGVVH 343
RG+ K GCSS+ ++ H
Sbjct: 442 ERGLTKDLGCSSVEVEHQRH 461
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 5 LYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVG----YVGAARDLFSSM-PQRNVR 59
L + C H + + ++ ++ + + HLI + LF+ + P+ +V
Sbjct: 16 LKSFCRTQIHVKQIQAQIIIHNLQSHTTIAEHLITASQSHNLLNYVSPLFTHLIPKPHVF 75
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+ S+I + + L ++S M K+ PN T + + + D + V+
Sbjct: 76 IFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSHDFVQSQCVYTHV 135
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
G++ ++YV N+L+D+Y GCLE ++F+ M +R VVSW+ MI+G+
Sbjct: 136 IKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDAL 195
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD---YGIVPGVEHYGCL 236
M G+ PN VT + L AC+ ++ G + ++RR+ ++ G L
Sbjct: 196 LVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGT----AL 251
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
+D+ + GR+EE +V +M N ++ G L K++ EEA+ ++++L
Sbjct: 252 IDMYVKCGRVEEGLKVFCDMK-EKNVFTLNVVIKGLALAKSV---EEALLWFNRMEL 304
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 188/342 (54%), Gaps = 1/342 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A+ LF M Q++ +W ++I G E+L +FS+M +G PN T +V+ ACA
Sbjct: 264 AKQLFGEMTQKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACAN 322
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L L G+ +H G N+ + NALIDMY KCG + + +++F GMR +VSW+SM
Sbjct: 323 LAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSM 382
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
++G+ H M+ G+KP+ + F+ VL ACSH GLVD+G +M Y
Sbjct: 383 MIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYN 442
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ P + Y C+VDLLSRAGR++EA E+I NM P+ +W ALLG C+ +K + + A
Sbjct: 443 VAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAA 502
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
+ ++ G YV++SN A G W + + +R+LM+S KK G S I + V F
Sbjct: 503 LKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSF 562
Query: 346 VAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLED 387
+ GD K + E+ E L+ MK GY+ D DLED
Sbjct: 563 IVGDIFDSSNKEVCEVLELLIRHMKDAGYVLDLDCSAHDLED 604
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 4/241 (1%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I + G A LF MP R+V +WTS+I G C A VF+ M +DG KPN
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPN 106
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL-RNVYVCNALIDMYVK-CGCLEEGYRV 150
TV AVL AC L L GK VH A G ++YV NAL+DMY C ++ V
Sbjct: 107 AFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
FE + + VSW+++I G+ M + + +F + AC+ +G
Sbjct: 167 FEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSS 226
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ G+ + + ++G + ++D+ R EA+++ M+ + + W L+
Sbjct: 227 NLGKQVHAAV-INHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMT-QKDTITWNTLIA 284
Query: 271 G 271
G
Sbjct: 285 G 285
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 134/281 (47%), Gaps = 6/281 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F + +N SWT++I G L+VF +M + + + + + ACA
Sbjct: 163 ARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACAS 222
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+G GK VH +GF N+ V NA++DMY +C C E ++F M ++ ++W+++
Sbjct: 223 IGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTL 282
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL-TIMRRDY 224
I GF M+ G PN TF V+ AC+++ ++ G+ L I+ R
Sbjct: 283 IAGFET-LDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHR-- 339
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
G+ +E L+D+ ++ G + ++ ++ + M N V W +++ G H + A +
Sbjct: 340 GLDNNLELSNALIDMYAKCGNVADSHKIFSGMR-HTNLVSWTSMMIGYGAHGHGKEAVDL 398
Query: 285 MRHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKS 324
+ + D ++ + + + AG +E R RLM S
Sbjct: 399 FNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTS 439
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
CG+ H ++ + ++ N +I G V + +FS M N+ SWTS++ G
Sbjct: 328 CGQQLHGGIIHRGL-DNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGY 386
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL--- 125
G +EA+ +F+EM G KP+++ +AVL AC+ G ++ G R +
Sbjct: 387 GAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPD 446
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
R++Y C ++D+ + G ++E Y + E M
Sbjct: 447 RDIYAC--VVDLLSRAGRVKEAYELIENM 473
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 188/372 (50%), Gaps = 39/372 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR----- 56
L+ +Y CG +A +FD M +RD+A+W MI N G + A LF M
Sbjct: 157 LIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPN 216
Query: 57 ----------------------------------NVRSWTSVIYGLAKCGMCEEALKVFS 82
+V +W ++I G A+ E VF
Sbjct: 217 DFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFR 276
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
EM G PN+VT+ A+L AC +G +++G+ VH F GF NV++ +ALIDMY KCG
Sbjct: 277 EMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCG 336
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
L++ VF+ ++ + V SW++MI F M G++PN VTF +L
Sbjct: 337 SLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILS 396
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
ACSH G V+KG + T+M+ YG+ EHY C+VDLL R+G++ EA E I M +
Sbjct: 397 ACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVEAYEFIKAMPIQVTE 456
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+ GA L GC++H LA++ + ++ L G +V +SN+YA G WEE +R++M
Sbjct: 457 SIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNGSGSFVTLSNIYAAEGDWEEAGNVRKVM 516
Query: 323 KSRGVKKTPGCS 334
K R V K PG S
Sbjct: 517 KERNVNKWPGSS 528
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 4/266 (1%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA L+ ++ + ++ + + +A LF ++ + NV ++ +I G+
Sbjct: 33 GKQIHAMLLTTGTNTNILSLSSKLVGMYSSCTDLKSATLLFHNIHKPNVFAFNWMILGMV 92
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
G + AL F M G N+ T V+ C L D++ GK VH G + +V
Sbjct: 93 YNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVL 152
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
+ N LIDMY KCG ++ RVF+GM ER V SW+SMI GF M G
Sbjct: 153 IGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEG 212
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+PN T+ ++ + +G K + M+++ G +P V + L+ ++ + E
Sbjct: 213 YEPNDFTWNAIIATYARLGDSKKAFGFMERMQKE-GFIPDVVAWNALISGFAQNHQFRET 271
Query: 250 REVIANMSVP---PNRVVWGALLGGC 272
V M V PN+V ALL C
Sbjct: 272 FTVFREMLVSGICPNQVTIAALLPAC 297
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 25 RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM 84
D+ N +I G V A +F M +R+V SWTS+I G G EEAL +F M
Sbjct: 149 NDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERM 208
Query: 85 EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL 144
+ +G +PN+ T A++ A+LGD + + GF+ +V NALI + +
Sbjct: 209 KMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQF 268
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
E + VF RE M+ G+ PN VT +L AC
Sbjct: 269 RETFTVF---RE----------------------------MLVSGICPNQVTIAALLPAC 297
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
VG V GR + + R G V L+D+ S+ G L++AR V + N
Sbjct: 298 GSVGSVKWGREVHGFICRK-GFDANVFIASALIDMYSKCGSLKDARNVFDKIQC-KNVAS 355
Query: 265 WGALL 269
W A++
Sbjct: 356 WNAMI 360
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 187/344 (54%), Gaps = 19/344 (5%)
Query: 35 AHLINVGYVG-------------------AARDLFSSMPQRNVRSWTSVIYGLAKCGMCE 75
AH+I VGYV A+ LF+++ +++ +W ++I G + G+ E
Sbjct: 78 AHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEE 137
Query: 76 EALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALI 135
L+ F EM + +P++ T +V ACA L LE G+ H NV V +ALI
Sbjct: 138 VGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALI 197
Query: 136 DMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
DMY KC C+ +G +F+ R ++W+++I G+ H MI +PNYV
Sbjct: 198 DMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYV 257
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
TF+ VL ACSHVGL+D+ M RDY +VP +HY +VDLL R+G+L+EA E +
Sbjct: 258 TFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLK 317
Query: 256 MSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEV 315
+ V+WGALLG C++H ++ L + A + + + +N G YVV++N YA +G W++V
Sbjct: 318 SPYKEHSVIWGALLGACKIHGDLDLLKIASKKYFEFERVNTGKYVVLANAYASSGLWDDV 377
Query: 316 SRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
+R ++ GV K PG S I + V F GD+ H QA ++
Sbjct: 378 EEVRASLRESGVTKEPGYSRIEVQKEVSFFFNGDKYHRQADEVY 421
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 5/236 (2%)
Query: 44 GAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC 103
G F S +N ++ V+ GL G E+A+++ + + G + T +L C
Sbjct: 8 GKIFSAFRSSLAKNTQNLDKVLQGLCVSGKLEDAIRL---LYRTGFPVHPRTYSLMLQEC 64
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+ G+ +H G++ N Y+ L+ +Y K GCLE +F + E+ +W+
Sbjct: 65 IFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVEKDSFAWN 124
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRD 223
+MI G+ M + ++P+ TF V AC+ + L++ GR +M +
Sbjct: 125 AMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRACATLALLEPGRQAHGVMLK- 183
Query: 224 YGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
I V L+D+ + + + R ++ + + N + W L+ G H +V
Sbjct: 184 CQIGDNVVVNSALIDMYFKCSCICDGR-LLFDKCLSRNTITWTTLISGYGKHGQVV 238
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 184/333 (55%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL Y+ C + +F ++ D N MI N G V A+++F+SMP + + SW
Sbjct: 336 LLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISW 395
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S++ GL + EAL FS M K K ++ + +V+ ACA LE G+ + A
Sbjct: 396 NSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAIT 455
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
G + +C +L+D Y KCG +E G +VF+GM + VSW++M++G+A +
Sbjct: 456 LGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTL 515
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G++P+ +TF G+L AC H GLV++GR L M+ DY I PG+EHY C+VDL +
Sbjct: 516 FNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFA 575
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R G EA +I M + +W ++L GC H N + + A + +LD N G Y+
Sbjct: 576 RVGCFGEAMYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQ 635
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
+SN+ A + WE + +R LM+++ V+K PGCS
Sbjct: 636 LSNILATSEDWEGSAEVRELMRNKNVQKIPGCS 668
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGY------------------- 42
LL LY+ G A +FD+MPQ + +WN +I IN+G+
Sbjct: 36 LLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAHINLGHRNKSLELFHAMPHKTHYSW 95
Query: 43 ------------VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
+ A+ LF++MP +N W S+I+G ++ G +L +F EM D +
Sbjct: 96 NLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLE 155
Query: 91 P---NEVTVVAVLVACAQLGDLEFGKSVHR--FAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ + V ACA L L+ GK VH F G F ++ +C+++++ Y KCG L+
Sbjct: 156 TVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLD 215
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFA 170
RV ++E S S+++ G+A
Sbjct: 216 SAARVVGFVKEVDDFSLSALVSGYA 240
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 43/306 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+++ Y CG+ A + + + D + + +++ N G + AR +F + W
Sbjct: 204 IVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLW 263
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I G G EAL +F++M ++G + V +L + L ++E K +H A
Sbjct: 264 NSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFK 323
Query: 122 NGFLRNVYVCNALIDMYVK-------------------------------CGCLEEGYRV 150
G ++ V + L+D Y K CG +E+ V
Sbjct: 324 IGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEV 383
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS----- 205
F M +T++SW+S++VG + M ++ +K + +F V+ AC+
Sbjct: 384 FNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSL 443
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+G G+A+ + D I LVD + G +E R+V M + + V W
Sbjct: 444 ELGEQLFGKAITLGLESDQIICTS------LVDFYCKCGLVEMGRKVFDGM-IKTDEVSW 496
Query: 266 GALLGG 271
+L G
Sbjct: 497 NTMLMG 502
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 181/324 (55%), Gaps = 2/324 (0%)
Query: 49 LFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLG 107
LFS + +++ WT++I G + ++AL ++ EM + P++ T V VL ACA L
Sbjct: 602 LFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLS 661
Query: 108 DLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMI 166
L+ G+ +H GF + +AL+DMY KCG ++ +VFE + ++ V+SW+SMI
Sbjct: 662 SLQDGQEIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMI 721
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
VGFA + M + P+ VTF+GVL ACSH GLV +GR + M Y I
Sbjct: 722 VGFAKNGYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHAGLVSEGRQIFDNMVNYYSI 781
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
P V+H+ C+VDLL R G LEEA E I + V PN ++W LLG C +H + A
Sbjct: 782 HPRVDHHACMVDLLGRCGFLEEAEEFIDKLDVEPNAMIWANLLGACSIHGDEKRGLRAAE 841
Query: 287 HLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
L +L+ N YV++ N++A +G W+E +RR M V+KTPGCS I +D + FV
Sbjct: 842 KLIELEPQNSSPYVLLYNMHAGSGHWDEAKSLRRTMVQNEVQKTPGCSWIVVDKTTNLFV 901
Query: 347 AGDETHPQAKGIFEMWEKLLVKMK 370
A D +HP + I + L M+
Sbjct: 902 ASDMSHPSSDEISHALKHLAALMR 925
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 10/230 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A+ +F + RNV W +++ A+ G + +++FSEM G+ P+E T ++L +CA
Sbjct: 296 AKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCAC 355
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L+ G+ +H F N+ V NAL+DMY K G L+E + FE M+ R +SW+++
Sbjct: 356 FDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAI 415
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG---RALLTIMRR 222
+VG+ M R G+ P+ V +L AC ++ +++ G L +
Sbjct: 416 LVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGL 475
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALLGG 271
D + G L+D+ S+ G +E+AR++ + M P VV AL+ G
Sbjct: 476 DTNLFAG----SSLIDMYSKCGGIEDARKIYSCM--PEWSVVSMNALIAG 519
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 157/354 (44%), Gaps = 16/354 (4%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++ G + AR F M R+ SW +++ G + EA +F M + G
Sbjct: 382 NALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVV 441
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
P+EV + ++L AC + LE G H + G N++ ++LIDMY KCG +E+ ++
Sbjct: 442 PDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKI 501
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
+ M E +VVS +++I G+A+ I +G+KP+ +TF ++ C V
Sbjct: 502 YSCMPEWSVVSMNALIAGYAIKDTKEAINLLHEMQI-LGLKPSEITFASLIDCCKESPKV 560
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
G + + ++ G++ G E G L+ + + +L E + + +S + V+W AL+
Sbjct: 561 ILGMQIHCAILKN-GLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALI 619
Query: 270 GGCRLHKNIVLAEEAM---RHLSKLDLLND-GYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
G H +++A+ R + ++L D +V + A ++ I L+
Sbjct: 620 SG---HTQNDCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHT 676
Query: 326 GVKKTPGCSSITID-----GVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGY 374
G SS +D G V E P K + W ++V GY
Sbjct: 677 GFDLDELTSSALVDMYAKCGDVKSAAKVFEELPIKKDVIS-WNSMIVGFAKNGY 729
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 142/309 (45%), Gaps = 42/309 (13%)
Query: 2 LLHLYASCGETRHARLMFD---KMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQR-- 56
L+H YA C AR +F+ ++ D AT+ +I + VG A LF M
Sbjct: 113 LIHFYAKCKCLNSARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQSGFV 172
Query: 57 ---------------------------------NVRSWTSVIYGLAKCGMCEEALKVFSE 83
NV +W +I G K G +EA++ + +
Sbjct: 173 LDELVIVTVLNACVNLGKLDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRK 232
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M +G + T+ +VL A A LGDL G VH A GF +VYV ++LI+MY KC
Sbjct: 233 MRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEM 292
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
L + +VF+ + +R VV W++++ +A + M+ G P+ T+ +L +
Sbjct: 293 LCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSS 352
Query: 204 CSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
C+ +D GR L TI+++ + V + LVD+ ++AG L+EAR+ M N
Sbjct: 353 CACFDFLDIGRQLHSTIIKKRFTDNLCVNN--ALVDMYAKAGALKEARKQFERMKYRDN- 409
Query: 263 VVWGALLGG 271
+ W A+L G
Sbjct: 410 ISWNAILVG 418
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y+ CG AR ++ MP+ + + N +IA GY A +D
Sbjct: 485 LIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIA-----GY--AIKD------------- 524
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+EA+ + EM+ G KP+E+T +++ C + + G +H
Sbjct: 525 ------------TKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILK 572
Query: 122 NGFL-RNVYVCNALIDMYVKCGCLEEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXX 179
NG L + ++ +L+ MY+ L EG +F + +++V W+++I G +
Sbjct: 573 NGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQAL 632
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M + P+ TF+ VL AC+ + + G+ + +++ G LVD+
Sbjct: 633 NLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHT-GFDLDELTSSALVDM 691
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
++ G ++ A +V + + + + W +++ G
Sbjct: 692 YAKCGDVKSAAKVFEELPIKKDVISWNSMIVG 723
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 189/322 (58%), Gaps = 5/322 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++++++ G AR +FD+ R++ W +++ + G V RD+F MPQRN S
Sbjct: 146 VINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASN 205
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-----KPNEVTVVAVLVACAQLGDLEFGKSVH 116
++++ G + E +++F E++K K N +V+VL AC +G E GK +H
Sbjct: 206 SAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIH 265
Query: 117 RFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXX 176
+ + NG ++ + ALID Y KCG +++ +VF+ M + V +WS+MI+G A++
Sbjct: 266 SYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNK 325
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
M +VG KPN VTF+GVL AC+H L + L IM Y I P +EHYGC+
Sbjct: 326 MALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCI 385
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND 296
VD+L+R+G++++A I +M + P+ +WG+LL GC +H + L ++ ++L + D +
Sbjct: 386 VDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFDPEHS 445
Query: 297 GYYVVMSNVYAEAGKWEEVSRI 318
G YV+++N+YA GKWE VS +
Sbjct: 446 GRYVLLANMYANMGKWEGVSEV 467
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 131/298 (43%), Gaps = 14/298 (4%)
Query: 2 LLHLYASC--GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
+L +A+ G+ R+A +F MP +I +N +I + +F+ M N+R
Sbjct: 46 ILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIR 105
Query: 60 SWTSVIYGLAK-CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
+ L K C +VF+ K G+ + V +V+ ++ G + + V
Sbjct: 106 PNSHTFTTLVKSCVTLSSLEQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDE 165
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXX 178
+ RNV +L+ Y CG + E VF+ M +R S S+M+ G+ +
Sbjct: 166 SSN----RNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEG 221
Query: 179 XXXXXXMI-----RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
+ R +K N + VL+AC+ +G ++G+ + + + + G+ +E
Sbjct: 222 VQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEEN-GLEYDLELG 280
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L+D ++ G +++A +V M V + W A++ G ++ N +A E + K+
Sbjct: 281 TALIDFYAKCGWVKDAEKVFDKMLV-KDVATWSAMILGLAINGNNKMALELFEKMEKV 337
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 232 bits (591), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 193/367 (52%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
Q D+ + ++ G + AA +F S + + S T ++ A+ G EEA+++F++
Sbjct: 283 QSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTK 342
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G + + V AVL L GK +H F N +V N L++MY KCG
Sbjct: 343 MVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGD 402
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
L + VF M ++ VSW+S+I FA H M G+ P VTF+ +LHA
Sbjct: 403 LSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHA 462
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH GLV+KG LL M D+GI P EHY C+VD+L RAG L EA++ I + +
Sbjct: 463 CSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVL 522
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
VW ALLG C +H + + + A L + YV+M+N+Y+ G W+E + + MK
Sbjct: 523 VWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMK 582
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLL 383
GV K G S I I+ V+ FV GD+ HP+A IF + LL +K +GY+PD +L
Sbjct: 583 EMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHLKDEGYVPDKKFILF 642
Query: 384 DLEDAKQ 390
LE K+
Sbjct: 643 YLEQDKE 649
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 134/258 (51%), Gaps = 9/258 (3%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+R+I N +I R +F M +RNV +WT+VI GLA+ E++L++F++
Sbjct: 181 EREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQ 240
Query: 84 MEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
M GS PN +T ++ L+AC+ L L G+ +H G ++ + +AL+D+Y KCG
Sbjct: 241 MRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCG 300
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK--PNYVT-FIG 199
L+ +++FE E VS + ++V FA + M+ +GM+ N V+ +G
Sbjct: 301 SLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLG 360
Query: 200 VLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVP 259
V +++ L + +L I+++++ P V + LV++ S+ G L ++ V M+
Sbjct: 361 VFGVGTYLALGKQIHSL--IIKKNFCENPFVGN--GLVNMYSKCGDLSDSLLVFYQMT-Q 415
Query: 260 PNRVVWGALLGGCRLHKN 277
N V W +++ H +
Sbjct: 416 KNSVSWNSVIAAFARHGD 433
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 17/261 (6%)
Query: 8 SCGETRHARLM-------FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+ G + HAR++ FD + + WN +++ G A ++F MP R+ S
Sbjct: 51 TLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVS 110
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGS---KPNEVTVVAVLVACAQLGDLEFGKSVHR 117
W ++I G + G + + K F +M + + ++ T+ +L C L L SV +
Sbjct: 111 WNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGL-RLGISTSVTQ 169
Query: 118 FAKG----NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
G GF R + V NALI Y KC C +G +VF+ M ER VV+W+++I G A +
Sbjct: 170 MIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNE 229
Query: 174 XXXXXXXXXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
M G + PN +T++ L ACS + ++ G+ + ++ + G+ +
Sbjct: 230 FYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWK-LGMQSDLCI 288
Query: 233 YGCLVDLLSRAGRLEEAREVI 253
L+DL S+ G L+ A ++
Sbjct: 289 ESALMDLYSKCGSLDAAWQIF 309
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/335 (34%), Positives = 196/335 (58%), Gaps = 2/335 (0%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
LF + ++ + +W +++ G A EE + EM ++G +PN VT+ ++L CA++ +
Sbjct: 385 LFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIAN 444
Query: 109 LEFGKSVHRF--AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMI 166
L+ GK H + + F + + N+L++MY + G + E +VF+ + + V+++SMI
Sbjct: 445 LQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMI 504
Query: 167 VGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI 226
+G+ + M R+ +KP++VT + VL ACSH GLV +G+ L M YGI
Sbjct: 505 MGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGI 564
Query: 227 VPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
P VEHY C+VDL RAG L++A+EVI MS P +W L+G C++H N V+ E A
Sbjct: 565 DPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAG 624
Query: 287 HLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFV 346
L ++ + GYY++++N+YA A + ++ + R M+ G K+TPGC+ + + + F+
Sbjct: 625 KLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAKRTPGCAWVDVGRELCPFL 684
Query: 347 AGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVV 381
AGD ++P++ I M ++L + MK GY P VV
Sbjct: 685 AGDTSNPRSCEISPMMKRLNILMKDAGYAPSEGVV 719
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 134/261 (51%), Gaps = 6/261 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQ----RN 57
L+ +Y G+ AR +FD MP RD +WN MI+ + G A LF M + RN
Sbjct: 234 LVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERN 293
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ W ++ G G + ALK+FS+M + + + V +V L AC+ +G ++ GK +H
Sbjct: 294 IIIWNTIAGGCLHTGNFKGALKLFSQM-RAVIQLDSVAMVVGLNACSHIGAVKLGKEIHG 352
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
A F V N LI MY +C L Y +F + E+ +++W++M+ GFA
Sbjct: 353 HAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEE 412
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM-RRDYGIVPGVEHYGCL 236
M+R G++PNYVT +L C+ + + G+ M +R+ + + L
Sbjct: 413 VSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSL 472
Query: 237 VDLLSRAGRLEEAREVIANMS 257
V++ SR+G++ EAR+V ++S
Sbjct: 473 VEMYSRSGKVLEARKVFDSLS 493
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 25/334 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRD------IATWNIMIAHLINVGYVGAARDLFSSMPQ 55
+L L A +H + M +R+ + WN ++ G V AR +F S+ +
Sbjct: 435 ILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSR 494
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
++ ++TS+I G G E ALK+F+EM + KP+ VT+VAVL+AC+ G + G+ +
Sbjct: 495 KDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVL 554
Query: 116 HR-FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHX 173
R + G V + ++D++ + G L++ V GM + T W+++I +H
Sbjct: 555 FRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHG 614
Query: 174 XXXXXXXXXXXMIRVGMKPN---YVTFIGVLHACSHVGLVDKGRALLTIMRRDYGI--VP 228
++ MKP+ Y I ++A ++ +DK T M RD G P
Sbjct: 615 NTVIGEWAAGKLLE--MKPDHSGYYLLIANMYAAAN--RLDKEAEARTYM-RDSGAKRTP 669
Query: 229 GVEHYGCLVDLLS-RAGRLEEAREV-IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMR 286
G +L AG R I+ M N ++ A G + +V +EE
Sbjct: 670 GCAWVDVGRELCPFLAGDTSNPRSCEISPMMKRLNILMKDA---GYAPSEGVVSSEEDFE 726
Query: 287 HLSKL--DLLNDGYYVVMSNVYAEAGKWEEVSRI 318
LS + +L+ D YV V + +EE+S I
Sbjct: 727 ELSMIGNELIKDAGYVPSEGVVSSEEDFEELSMI 760
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W VI K + E+A+ V+ M G P++ T +VL AC +L D + G +VH+ +
Sbjct: 161 WNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQ 220
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ +++V NAL+ MY + G LE +F+ M R VSW++MI +A
Sbjct: 221 ESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFR 280
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
M G++ N + + + C H G L + MR
Sbjct: 281 LFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMR 321
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 187/364 (51%), Gaps = 34/364 (9%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G AR +FD M +R+ TW M+A N G + AA +L+ M ++ +W ++I
Sbjct: 191 YAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMI 250
Query: 66 YGLAKCGMCEEALKVFSE--------------------------------MEKDGSKPNE 93
G K G EA ++F E M + K +
Sbjct: 251 AGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTD 310
Query: 94 VTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY-VCNALIDMYVKCGCLEEGYRVFE 152
V +V + ACAQL D+ S+ + GF + V NALI M KCG ++ +R F
Sbjct: 311 VAMVGAISACAQLRDIRMSNSL-TYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFN 369
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
MR R + ++S+MI FA H M + G+KPN VTF+GVL+ACS GL+++
Sbjct: 370 IMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLIEE 429
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
G IM YGI P EHY C+VDLL RAG+LE+A +I S + WG+LL C
Sbjct: 430 GCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAAC 489
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
R++ N+ L E A RHL ++D + G YV+++N YA KWE +++LM +G+KK G
Sbjct: 490 RVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWECAEEVKKLMSKKGMKKPSG 549
Query: 333 CSSI 336
S I
Sbjct: 550 YSWI 553
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 46 ARDLFSSMPQ-RNVRSWTSVIYGLAK--CGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
A LF +MP N WTS+I C + F+ M + G P+ T VL A
Sbjct: 66 AHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCH-CISTFARMHQKGILPSGFTFSLVLNA 124
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C ++ GK VH +GFL N V AL+DMY KCG + + VF+G+ +R VV+W
Sbjct: 125 CGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAW 184
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM-- 220
++MI G+A M + N T+ ++ ++ G + L +M
Sbjct: 185 TAMICGYAKAGRMVDARFLFDNM----GERNSFTWTTMVAGYANYGDMKAAMELYDVMNG 240
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ + V + YG L G + EAR + ++VP N ALL
Sbjct: 241 KDEVTWVAMIAGYGKL-------GNVSEARRIFDEITVPWNPSTCAALLA 283
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 134/327 (40%), Gaps = 29/327 (8%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA CG AR +FD + RD+ W MI G + AR LF +M +RN +W
Sbjct: 156 LLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFTW 215
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T+++ G A G + A++++ M + +EVT VA++ +LG++ R
Sbjct: 216 TTMVAGYANYGDMKAAMELYDVM----NGKDEVTWVAMIAGYGKLGNVS---EARRIFDE 268
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG---FAMHXXXXXX 178
N C AL+ Y + G E ++E MR + +VG
Sbjct: 269 ITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRM 328
Query: 179 XXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRALLTIMR-RDYGIVPGVEHYGCL 236
I G + ++ ++H S G +D IMR RD + Y +
Sbjct: 329 SNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRD------LYTYSAM 382
Query: 237 VDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
+ + G+ ++A ++ M + PN+V + +L C L EE R +
Sbjct: 383 IAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSG---LIEEGCRFFQIMTE 439
Query: 294 LN-----DGYYVVMSNVYAEAGKWEEV 315
+ +Y M ++ AG+ E+
Sbjct: 440 MYGIEPLPEHYTCMVDLLGRAGQLEKA 466
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/330 (35%), Positives = 177/330 (53%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F M RNV +W ++I G G E +K+ EM ++G P+E+T+ +++ +C
Sbjct: 324 ARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGY 383
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
+ VH FA + V N+LI Y KCG + ++ FE + +V+W+S+
Sbjct: 384 ASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSL 443
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I +A H M+ G+KP+ + F+GVL AC+H GLV KG +M Y
Sbjct: 444 IYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQ 503
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
IVP EHY CLVDLL R G + EA E++ +M + + GA +G C+LH N+ LA+ A
Sbjct: 504 IVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAA 563
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEF 345
L ++ Y VMSN++A W +V RIR+ M+ + K PGCS I I +H F
Sbjct: 564 EKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSF 623
Query: 346 VAGDETHPQAKGIFEMWEKLLVKMKMKGYI 375
V+ D++HP A ++ LL MK + I
Sbjct: 624 VSNDKSHPNALEMYVTLNMLLRPMKEQNGI 653
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 130/296 (43%), Gaps = 46/296 (15%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LYA CG +AR +F + RD+ WN+M++ + F+S+P
Sbjct: 208 LVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYV-----------FNSLP------- 249
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL--VACAQLGDLEFGKSVHRFA 119
EEA +VF+ M D +E T ++L ++ L +FGK VH
Sbjct: 250 -------------EEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLV 296
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
F +V V +ALI+MY K + + RVF+ M R VV+W++MIVGF H
Sbjct: 297 LRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVM 356
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY----GC 235
M+R G P+ +T ++ +C + + + T+ + + + +
Sbjct: 357 KLVKEMLREGFLPDELTISSIISSCGYASAITE-----TLQVHAFAVKLSCQDFLSVANS 411
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKL 291
L+ S+ G + A + ++ P+ V W +L+ H LAE++ K+
Sbjct: 412 LISAYSKCGSITSAFKCF-ELTSQPDLVTWTSLIYAYAFHG---LAEKSTEMFEKM 463
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 29/272 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
+L +Y C E A+ +F+++P R++ +WNIMI +VG RN +
Sbjct: 101 ILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIR--ASVG--------------RNDENE 144
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+S G+ C F M + P+ +T ++ C Q D+E G +H F
Sbjct: 145 SS---GMRLC------FSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVK 195
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF + +V AL+ +Y KCG +E RVF + R +V W+ M+ + +
Sbjct: 196 VGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRV 255
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGL--VDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M + + TF +L S L D G+ + +++ R V L+++
Sbjct: 256 FNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQ-SFDSDVLVASALINM 314
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+++ + +AR V MS+ N V W ++ G
Sbjct: 315 YAKSENIIDARRVFDEMSI-RNVVAWNTMIVG 345
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 16/160 (10%)
Query: 7 ASCG------ETRHARLMFDKMPQRD-IATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
+SCG ET K+ +D ++ N +I+ G + +A F Q ++
Sbjct: 379 SSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLV 438
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+WTS+IY A G+ E++ ++F +M G KP+ + + VL ACA G + K +H F
Sbjct: 439 TWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVT--KGLHYFK 496
Query: 120 KGNGFLRNV-----YVCNALIDMYVKCGCLEEGYRVFEGM 154
+ V Y C L+D+ + G + E + + M
Sbjct: 497 LMTNAYQIVPDSEHYTC--LVDLLGRYGLINEAFEILRSM 534
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 23/229 (10%)
Query: 89 SKPNEVTVVA--VLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
+ PN V + L A+ G L GK +H GF + + + N ++ +Y+KC E+
Sbjct: 54 NDPNTVHLFCSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAED 113
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX------XXXXXMIRVGMKPNYVTFIGV 200
++FE + R VVSW+ MI M+ M P+++TF G+
Sbjct: 114 AKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGL 173
Query: 201 LHACSHVGLVDKGRALLTIMRRDYGIVPGVE---HYGC-LVDLLSRAGRLEEAREVIANM 256
+ C+ ++ G L + + G + GC LV L ++ G +E AR V ++
Sbjct: 174 ICLCTQFNDIEMGVQL-----HCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDV 228
Query: 257 SVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS--KLDLLNDGYYVVMS 303
S + V+W ++ C + + L EEA R + +LD++N + S
Sbjct: 229 SC-RDLVMWNVMV-SCYVFNS--LPEEAFRVFNSMRLDVVNGDEFTFSS 273
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/370 (35%), Positives = 199/370 (53%), Gaps = 27/370 (7%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L H+Y SCG AR+MFD M RD+ +WN MI + VG + AA LF MP+RN+ +W
Sbjct: 178 LAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTW 237
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+I G +K ALK+F EM + + N T+V + AC + G L+ GKSVH +
Sbjct: 238 NCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHG-SMI 296
Query: 122 NGFLRNVYVCN-ALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
F+R+ + + ALIDMY KCG +E +VFE M R +VSW++MI+G +H
Sbjct: 297 RLFMRSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGLS 356
Query: 181 XXXXMI--------------------RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
M+ V + P+ +TFIG+L AC+ L+ +GR+ M
Sbjct: 357 LFDLMVGMERVKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQM 416
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS-----VPPNRVVWGALLGGCRLH 275
+G+ P H+ C+ +LL+ G ++EA E + NM+ + ++W +LLG CR
Sbjct: 417 IDVFGLKPNFAHFWCMANLLANVGLIDEAEECLKNMAKFDGYISHESLLWASLLGLCRFK 476
Query: 276 KNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSS 335
+++ L E+ + L D N YY + +YA A +WE VSR+++LMK R + PG +
Sbjct: 477 RDVYLGEQIAKLLIDTDPNNLAYYQFLLIIYAVAAQWENVSRVQKLMKERKLDIIPGSNL 536
Query: 336 ITIDGVVHEF 345
+ + +VH F
Sbjct: 537 VDLKNIVHNF 546
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 100/228 (43%), Gaps = 34/228 (14%)
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVK 140
FS + K G N T V+++ AC+++ ++ GK H A NG + V N+L MY
Sbjct: 126 FSSL-KIGFFANSYTFVSLISACSKMSCVDNGKMCHGQAVKNGVDFVLPVENSLAHMYGS 184
Query: 141 CGCLEEGYRVFEGMRERTVVSWSSMIVGF-------AMHXXXXX---------------- 177
CG +E +F+GM R +VSW+SMI G+ A H
Sbjct: 185 CGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGY 244
Query: 178 --------XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
M R+ ++ N T + + AC G + +G+++ M R + +
Sbjct: 245 SKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLF-MRSS 303
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+ L+D+ + GR+E A +V MS N V W A++ G +H N
Sbjct: 304 LILDTALIDMYCKCGRVEAASKVFERMS-SRNLVSWNAMILGHCIHGN 350
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 124/380 (32%), Positives = 213/380 (56%), Gaps = 8/380 (2%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA+++ + ++ N ++ + +AR +F + R V SW+++I G A
Sbjct: 337 GKQLHAQVIRNG-SDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYA 395
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
C EAL +F EM+ G+K + V V+ +L A A++G L + +H ++
Sbjct: 396 MHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKS 455
Query: 130 VCNALIDMYVKCGCLEEGYRVF--EGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
+ +L++ Y KCGC+E ++F E + +V+W+SMI ++ H +
Sbjct: 456 LKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKL 515
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
+KP++VTF+G+L AC + GLVDKG+ + M YG P EH C+VDLL RAG+++
Sbjct: 516 SIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKID 575
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHK-NIVLAEEAMRHLSKLDLLNDGYYVVMSNVY 306
EAR++I + + V+G LL C++H AE A L K++ N YV++SN++
Sbjct: 576 EARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIF 635
Query: 307 AEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLL 366
A AGKW++ +++R ++ RG+KKTPGCS + +DG HEF D +HP+++ I+ + + L
Sbjct: 636 AAAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADHSHPRSEDIYSVLKVLE 695
Query: 367 VKMKMKG----YIPDTSVVL 382
++ M+ + D S +L
Sbjct: 696 LEAGMEDDDLEFFFDPSTIL 715
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F MP+++V W +I + G +E+L++ M + G +P+ T + + + +
Sbjct: 271 ARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITK 330
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L +E+GK +H NG V V N+L+DMY C L ++F +++RTVVSWS+M
Sbjct: 331 LKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAM 390
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
I G+AMH M G K + V I +L A + +G
Sbjct: 391 IKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIG 433
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W ++IY + G E+ ++F M + +PN VT++ +L A + L+ GK +H
Sbjct: 185 WNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVV 244
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ + + V AL+ MY K L++ +FE M E+ VV W+ MI ++
Sbjct: 245 ASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLE 304
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+R G++P+ T I + + + + ++ G+ L + R+ G V + LVD+
Sbjct: 305 LVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRN-GSDYQVSVHNSLVDMY 363
Query: 241 SRAGRLEEAREVIANMSVPPNRVV--WGALLGGCRLHKN 277
S L AR++ + +R V W A++ G +H N
Sbjct: 364 STCADLNSARKIFG---LIKDRTVVSWSAMIKGYAMHDN 399
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 180/300 (60%), Gaps = 3/300 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ AA LF M ++ + +W S+I G + G +A+++FSEM G KP+ +T+ ++L
Sbjct: 404 IEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSG 463
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C QLG+L G+++H + N ++ ALIDMY KCG L+ +VF +++ + +W
Sbjct: 464 CCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATW 523
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+++I G++++ + G+KP+ +TF+GVL AC+H GLV G IM +
Sbjct: 524 NAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTK 583
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAE 282
+YG++P ++HY C+V LL + G +EA E I M + P+ VWGALL C + + + L E
Sbjct: 584 EYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGE 643
Query: 283 EAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVV 342
+ L L+ N G+YV+MSN+YA G+W++V+R+R +MK G GCS +++ V+
Sbjct: 644 CLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSG---GDGCSGVSVIDVI 700
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 95/171 (55%)
Query: 33 MIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN 92
+I + +G+ AR++F M R+V SW +I G ++ G A+++F +M ++ KPN
Sbjct: 97 LIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPN 156
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+ T+V++L +C + G+S+H F GF + ++ NAL+ MY KC LE +F+
Sbjct: 157 QTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFD 216
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
M E++VVSW++MI + + M++ G P+ VT + ++ A
Sbjct: 217 EMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSA 267
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 6/237 (2%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G+ A+ L+ P +++ + T++I ++ G E A++ F + + KP+ V ++ VL
Sbjct: 301 GFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVL 360
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
G + H + +G + V N LI +Y + +E +F MRE+ ++
Sbjct: 361 HGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLI 420
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+SMI G M G KP+ +T +L C +G + G L + +
Sbjct: 421 TWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYI 480
Query: 221 RRDYGIVPGVEHY--GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH 275
R+ VE + L+D+ S+ GRL+ A +V N+ P W A++ G L+
Sbjct: 481 LRNN---VRVEDFIGTALIDMYSKCGRLDYAEKVFYNIK-DPCLATWNAIISGYSLY 533
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 49/276 (17%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +YA C + ++L+FD+M ++ + +WN MI
Sbjct: 198 LMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIG-------------------------- 231
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+YG + G+ ++A+ F EM K+G P+ VT++ ++ A A F ++VH +
Sbjct: 232 ---VYG--QNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA------FPENVHCYVVK 280
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF + V +L+ +Y K G ++++ + +++ +++I ++
Sbjct: 281 CGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVEC 340
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLV---- 237
I++ +KP+ V IGVLH G+ + + YG+ G+ + CLV
Sbjct: 341 FIQTIQLDIKPDAVALIGVLH-----GITNPSHFAIGCTFHGYGVKSGLSN-DCLVANGL 394
Query: 238 -DLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
L SR +E A + +M P + W +++ GC
Sbjct: 395 ISLYSRFDEIEAALSLFYDMREKP-LITWNSMISGC 429
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 31/252 (12%)
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVA---------CAQLGDLEFGKSVHRFAKGNGFLRN 127
AL +F ++ + PNE T ++ A C L+ + + G +
Sbjct: 32 ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQ-ARQIQTQCLKRGVNQF 90
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
++V +LID+Y+K G +F+ M R VVSW+ +I G++ + M+R
Sbjct: 91 IHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR 150
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV---EHY-GCLVDLLSRA 243
KPN T + +L +C L+ +GR++ +GI G H L+ + ++
Sbjct: 151 ENFKPNQTTIVSLLPSCGCFELIFQGRSI-----HGFGIKAGFGLDSHLNNALMSMYAKC 205
Query: 244 GRLEEAREVIANMSVPPNRVVWGALLG----GCRLHKNIVLAEEAMR---HLSKLDLLND 296
LE ++ + M + V W ++G K I+ +E ++ H S + ++N
Sbjct: 206 DDLEASQLLFDEMD-EKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMN- 263
Query: 297 GYYVVMSNVYAE 308
+V +N + E
Sbjct: 264 ---LVSANAFPE 272
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 185/345 (53%), Gaps = 1/345 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G++ H ++ K+ D A N ++ G++ + +F M +R++ SW +++ G A
Sbjct: 388 GKSIHGYILRQKL-SLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYA 446
Query: 70 KCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY 129
+ G +A +F+EM P+ +T+V+++ CA G L GK +H F NG +
Sbjct: 447 QNGCVYKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCIL 506
Query: 130 VCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG 189
V +L+DMY KCG L+ R F M + +VSWS++I G+ H +
Sbjct: 507 VDTSLVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFLETR 566
Query: 190 MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEA 249
+KPN+V F+ +L +CSH GL+D+G + M RD+G VP +EH+ C+VDLL RAG++EEA
Sbjct: 567 IKPNHVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLEHHACMVDLLCRAGKVEEA 626
Query: 250 REVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEA 309
+ M P V G +L CR + N L + + KL ++ G YV +++ YA
Sbjct: 627 YNLYKRMFSDPVLDVLGIILDACRANGNKELGDIIANDIIKLRPMSAGNYVQLAHCYASI 686
Query: 310 GKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQ 354
KWE V + M+S G++K PG S I I G + F +HPQ
Sbjct: 687 NKWEGVGEVWTHMRSLGLRKIPGWSFIDIHGTITTFFTDHNSHPQ 731
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 16/291 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L HL G + H R++ + + D + +I + GY AR +F MP+RNV W
Sbjct: 84 LFHL----GNSLHQRVIVNGL-STDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPW 138
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T+VI +K G EA +F +M +G +P+ VT++++L ++ + + + +H A
Sbjct: 139 TTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSE---VPYVQCLHGCAIF 195
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF+ ++ + N+++++Y KCG +E+ ++FE M R VVSW+S++ +A
Sbjct: 196 YGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLL 255
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M G++P F VL G + GR + + R G V + +
Sbjct: 256 LKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRG-GFVLDAHIETSFIVMYL 314
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
+ G + A ++ S+ + V+W A++ G +V E A + L+ D
Sbjct: 315 KGGNINVAFKMFER-SLDKDVVLWTAMISG------LVQNENADKALAVFD 358
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N M+ G + R LF M +R+V SW S++ A+ G E L + M+
Sbjct: 201 DLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMK 260
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G +P +VL GD+ G+ VH GF+ + ++ + I MY+K G +
Sbjct: 261 LQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNIN 320
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
+++FE ++ VV W++MI G + M + GMKP+ T V+ AC+
Sbjct: 321 VAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACA 380
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVW 265
+G + G+++ + R + H LV + ++ G L+++ V MS + V W
Sbjct: 381 QLGAFNLGKSIHGYILRQKLSLDTAAH-NSLVTMYAKCGHLDQSYIVFDRMS-KRDLVSW 438
Query: 266 GALLGG 271
A++ G
Sbjct: 439 NAIVAG 444
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
S+ ++I + G + L ++ M + T ++L AC+ L G S+H+
Sbjct: 34 THSYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQ 93
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXX 177
NG + Y+ ++LI+ YVK G + +VF+ M ER VV W+++I ++
Sbjct: 94 RVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVRE 153
Query: 178 XXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVD--KGRALLTIMRRDYGIVPGVEHYGC 235
M G++P+ VT + +L S V V G A+ YG + +
Sbjct: 154 AFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIF------YGFMSDLNLLNS 207
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+V+L + G +E+ R++ M + V W +LL
Sbjct: 208 MVNLYGKCGSIEDCRKLFEFMD-RRDVVSWNSLLSA 242
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 186/364 (51%), Gaps = 34/364 (9%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA G ARL+FD M +R+ TW M+A N G + AA +L+ M + +W ++I
Sbjct: 191 YAKAGRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMI 250
Query: 66 YGLAKCGMCEEALKVFSE--------------------------------MEKDGSKPNE 93
G K G EA ++F E M + K +
Sbjct: 251 AGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTD 310
Query: 94 VTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVY-VCNALIDMYVKCGCLEEGYRVFE 152
V +V + ACAQL D+ ++ + GF + V NALI M KCG ++ +R F
Sbjct: 311 VAMVGAISACAQLRDIRMS-NLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFN 369
Query: 153 GMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDK 212
MR R + ++S+MI FA H M + G+ PN VTF+GVL+ACS GL+++
Sbjct: 370 IMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEE 429
Query: 213 GRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGC 272
G IM YGI P EHY C+VDLL RAG+LE+A +I S + WG+LL C
Sbjct: 430 GCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAAC 489
Query: 273 RLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPG 332
R++ N+ L E A RHL ++D + G YV+++N YA KWE +++LM +G+KK G
Sbjct: 490 RVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSG 549
Query: 333 CSSI 336
S I
Sbjct: 550 YSWI 553
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 15/229 (6%)
Query: 46 ARDLFSSMPQ-RNVRSWTSVIYG-LAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVAC 103
A LF +MP N WTS+I L+ + F+ M + G P+ T +VL AC
Sbjct: 66 AHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNAC 125
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
++ + GK VH +GFL N V AL+DMY KCG + + VF+GM +R VV+W+
Sbjct: 126 GRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWT 185
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM--R 221
+MI G+A M + N T+ ++ ++ G + L +M +
Sbjct: 186 AMICGYAKAGRMVDARLLFDNM----GERNSFTWTTMVAGYANYGDMKAAMELYDVMNGK 241
Query: 222 RDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
+ V + YG L G + EAR + + VP N ALL
Sbjct: 242 EEVTWVAMIAGYGKL-------GNVSEARRIFDEIPVPLNPSTCAALLA 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 131/314 (41%), Gaps = 37/314 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA CG AR +FD M RD+ W MI G + AR LF +M +RN +W
Sbjct: 156 LLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFTW 215
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T+++ G A G + A++++ M + EVT VA++ +LG++ R
Sbjct: 216 TTMVAGYANYGDMKAAMELYDVM----NGKEEVTWVAMIAGYGKLGNV---SEARRIFDE 268
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
N C AL+ Y + G E ++E MR + +VG A+
Sbjct: 269 IPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVG-AISACAQLRDIR 327
Query: 182 XXXMIRVGMKPNY-----VTFIGVLHACSHVGLVDKGRALLTIMR-RDYGIVPGVEHYGC 235
++ ++ + + ++H S G +D IMR RD + Y
Sbjct: 328 MSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRD------LYTYSA 381
Query: 236 LVDLLSRAGRLEEAREVIANMS---VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
++ + G+ ++A ++ M + PN+V + +L C L EE R
Sbjct: 382 MIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSG---LIEEGCR------ 432
Query: 293 LLNDGYYVVMSNVY 306
++ +M+ VY
Sbjct: 433 -----FFQIMTGVY 441
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 166/287 (57%)
Query: 50 FSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDL 109
F +P ++V SWT + G + G AL V ++M+K G KPN+ T+ L ACA L +
Sbjct: 217 FDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASM 276
Query: 110 EFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF 169
E GK H G +V V NAL+DMY KCGC++ + VF R+VVSW++MI+
Sbjct: 277 EEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMAC 336
Query: 170 AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPG 229
A + M ++PNY+TFI VL+ACS G VD+G L+ M +DYGI+PG
Sbjct: 337 AQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPG 396
Query: 230 VEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLS 289
+HY C+V +L RAG ++EA+E+I M P VW LL C++H ++ + A H
Sbjct: 397 EDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAI 456
Query: 290 KLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
K D + YV++SN+ AE W+ V +R LM++R VKK PG S I
Sbjct: 457 KHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVKKVPGSSWI 503
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVAC 103
+A LF MP+RNV SW+SV+ G G +AL +FS M ++G KPNE T V+ L AC
Sbjct: 10 SALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQAC 69
Query: 104 AQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+ ++ ++ +G NV++ NA + V+ G L E ++FE R V+W+
Sbjct: 70 SLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWN 129
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMRR 222
+M+ G+ + M R G+KP+ TF L + + + G + ++R
Sbjct: 130 TMMGGY-LEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRS 188
Query: 223 DYG--IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV--WGALLGGC 272
YG I G LVD+ + +LEE + + P++ V W + GC
Sbjct: 189 GYGDDICVG----NSLVDMYLKNQKLEEGFKAFDEI---PHKDVCSWTQMADGC 235
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE-MEKDGS 89
N + L+ G + A +F + P R+ +W +++ G + E + VF M ++G
Sbjct: 98 NAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLE--FSSEQIPVFWRYMNREGV 155
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
KP+E T + L A + L+ G VH +G+ ++ V N+L+DMY+K LEEG++
Sbjct: 156 KPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFK 215
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
F+ + + V SW+ M G M ++G+KPN T L+AC+ +
Sbjct: 216 AFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKPNKFTLATALNACACLAS 275
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+++G+ +R G V L+D+ ++ G ++ A V + + + V W ++
Sbjct: 276 MEEGKQFHG-LRIKLGSDVDVCVDNALLDMYAKCGCMDSAWTVFRSTN-SRSVVSWTTMI 333
Query: 270 GGC 272
C
Sbjct: 334 MAC 336
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYV 195
MY+KC L ++F+ M ER VVSWSS++ G + M R G +KPN
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60
Query: 196 TFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
TF+ L ACS V + + +++ R G+ V + L R G+L EA ++
Sbjct: 61 TFVSALQACSLSENVTQAYQIYSLVVRS-GLECNVFLLNAFLTALVRNGKLTEALQIFET 119
Query: 256 MSVPPNRVVWGALLGG 271
+ + V W ++GG
Sbjct: 120 SPI-RDTVTWNTMMGG 134
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N ++ G + +A +F S R+V SWT++I A+ G EAL++F EM+
Sbjct: 294 DVCVDNALLDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMK 353
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFG-KSVHRFAKGNGFL--RNVYVCNALIDMYVKCG 142
+ +PN +T + VL AC+Q G ++ G K + K G + + Y+C ++ + + G
Sbjct: 354 ETSVEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYIC--MVSILGRAG 411
Query: 143 CLEEGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
++E + M V W +++ +H
Sbjct: 412 LIKEAKELILRMPFHPGVRVWQTLLSACQIH 442
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 177/315 (56%), Gaps = 1/315 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D + N ++ G + A +F++ ++V SW SVI G A+ G EAL +F+ M
Sbjct: 375 DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMR 434
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRN-VYVCNALIDMYVKCGCL 144
+ P+ VTVV VL ACA +G + G S+H FA G + + +YV AL++ Y KCG
Sbjct: 435 MESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDA 494
Query: 145 EEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHAC 204
VF+GM E+ V+W++MI G M M++ + PN V F +L AC
Sbjct: 495 TSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAAC 554
Query: 205 SHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
SH G+V++G + M ++ VP ++HY C+VDLL+RAG L+EA + I M V P V
Sbjct: 555 SHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGV 614
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
+GA L GC LH N E A+R + +L YYV++SN+YA G+W V +R ++K
Sbjct: 615 FGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQ 674
Query: 325 RGVKKTPGCSSITID 339
RG+ K PG S + +D
Sbjct: 675 RGLNKVPGVSLVEMD 689
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 9/232 (3%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F +P R+V SWTS+I + EE L +F+ M + N TV +++ AC +
Sbjct: 188 ARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTK 247
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERT------V 159
LG L GK VH + NG N Y+ +L++MYVKCG + + VF+ T +
Sbjct: 248 LGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDL 307
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
V W++MIVG+ + PN VT +L AC+ + + G+ LL +
Sbjct: 308 VFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGK-LLHV 366
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ YG+ LVD+ ++ G + +A V A +V + V W +++ G
Sbjct: 367 LVVKYGL-DDTSLRNSLVDMYAKCGLIPDAHYVFAT-TVDKDVVSWNSVISG 416
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 47/239 (19%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL+ YA CG+ AR++FD M +++ TW MI
Sbjct: 484 LLNFYAKCGDATSARMVFDGMGEKNAVTWAAMI--------------------------- 516
Query: 62 TSVIYGLAKCGMCEE---ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
CGM + +L +F +M K+ PNEV +L AC+ G +E G + F
Sbjct: 517 -------GGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDF 569
Query: 119 -AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMHXXXX 176
K F+ ++ ++D+ + G L+E + M + V + + + G +H
Sbjct: 570 MCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFD 629
Query: 177 XXXXXXXXMIRVGMKPN---YVTFIGVLHACS-HVGLVDKGRALLTIMRRDYGIVPGVE 231
M+ + P+ Y I L+A G+V + R + I +R VPGV
Sbjct: 630 FGEVAIRRMLE--LHPDQACYYVLISNLYASDGRWGMVKEVREM--IKQRGLNKVPGVS 684
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 195/375 (52%), Gaps = 40/375 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP------- 54
L+ +Y+ CGE R AR +FD M +D+ N +++ G A L +M
Sbjct: 173 LIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPN 232
Query: 55 --------------------------------QRNVRSWTSVIYGLAKCGMCEEALKVFS 82
+ +V SWTSV+ G + EEA F
Sbjct: 233 VVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFK 292
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
+M G P T+ A+L ACA + FGK +H +A G ++YV +AL+DMY KCG
Sbjct: 293 KMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCG 352
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGM-KPNYVTFIGVL 201
+ E +F M E+ V+ +SMI G+A H M G+ K +++TF L
Sbjct: 353 FISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAAL 412
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
ACSHVG ++ G+ L IM+ Y I P +EHY C+VDL RAG+LEEA +I +M V P+
Sbjct: 413 TACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPD 472
Query: 262 RVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRL 321
VWGALL CR H ++ LAE A +HLS+L+ + G +++S++YA+AG W +V RI+R
Sbjct: 473 LFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRR 532
Query: 322 MKSRGVKKTPGCSSI 336
+K ++K G S I
Sbjct: 533 IKKGKLRKLQGLSWI 547
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 154/323 (47%), Gaps = 19/323 (5%)
Query: 30 WNIMIAHLINV----GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
+N++ ++LI + G + AR LF +PQ N+ W ++I A+CG + AL+VFSEM+
Sbjct: 63 FNLIASNLITLYTTCGQLSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQ 122
Query: 86 K-DGSKPNEVTVV-AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+ K N V V+ +VL AC +GD +G+ VH F + +V +ALI MY KCG
Sbjct: 123 TLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGE 182
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ + +VF+GM + +V+ ++++ G+A M +G+ PN VT+ ++
Sbjct: 183 VRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISG 242
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM---SVPP 260
+ + + +M D + P V + ++ + R EEA + M P
Sbjct: 243 FAQKCDREMVSEIFRLMNEDR-VEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCP 301
Query: 261 NRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY-VVMSNVYAEAGKWEEVSRIR 319
ALL C + +E + + + +D Y + ++YA+ G +S R
Sbjct: 302 TSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGF---ISEAR 358
Query: 320 RLMKSRGVKKTPGCSSITIDGVV 342
L K P +++T++ ++
Sbjct: 359 TLF-----YKMPEKNTVTMNSMI 376
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 192/366 (52%), Gaps = 1/366 (0%)
Query: 1 MLLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP-QRNVR 59
+++ YA G+ + ++ +F+KM + + + N MI G + A LF +RN
Sbjct: 340 LMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCV 399
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
+W S++ G G EALK++ M + + + T + ACA L + G+ +H
Sbjct: 400 TWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQGQLLHAHL 459
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+ NVYV AL+D Y KCG L + R F + V +W+++I G+A H
Sbjct: 460 AKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAI 519
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M+ G+ PN TF+ VL ACSH GLVD+G M+ +Y I P +EHY C+VDL
Sbjct: 520 SRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDL 579
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYY 299
L R+GR++EA E I M + + V+WGALL N+ L E A L LD +
Sbjct: 580 LGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKLFSLDPNSVSAL 639
Query: 300 VVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIF 359
V +SN+YA G+W + ++IR+ ++S ++K G S I ++ VH F D THP + I+
Sbjct: 640 VTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFSWIELNNNVHLFSVEDTTHPYSDVIY 699
Query: 360 EMWEKL 365
+ E +
Sbjct: 700 KTVEHI 705
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
Query: 23 PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFS 82
P I+T NI IAH G + AR +F MP R V SW ++I G ++ G EAL + S
Sbjct: 34 PPHVIST-NISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVS 92
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
M K NEV+ A L AC + G L GK +H +G+ R V +AL+ YV+C
Sbjct: 93 FMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCC 152
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGF 169
+ E VFE +R+ V WS M+ G+
Sbjct: 153 GIREAEMVFEELRDENHVLWSLMLAGY 179
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 124/275 (45%), Gaps = 16/275 (5%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LLH Y C R A ++F+++ + W++M+A + +G A ++F MP R+V +W
Sbjct: 144 LLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAW 203
Query: 62 TSVIYGLAK-CGMCEEALKVFSEMEKDGSK-PNEVTVVAVLVACAQLGDLEFGKSVHRFA 119
T++I G AK CE AL +F M + PNE T+ VL CA+L L GK VH
Sbjct: 204 TTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLC 263
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+GF + V +AL + Y +++ RV+E M + + ++G
Sbjct: 264 IKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIG----GLVSMGR 319
Query: 180 XXXXXMIRVGMKPNYVTFIG---VLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCL 236
MI G++ T I ++ + G K + L M + + +
Sbjct: 320 VKEAGMIFYGLRDK--TLISNNLMIKGYAMSGQFKKSKKLFEKMSLKH-----LTSLNTM 372
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ + S+ G L+EA ++ N V W +++ G
Sbjct: 373 ITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSG 407
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 203/360 (56%), Gaps = 2/360 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQ-RDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRS 60
+L Y+ CG +A MF + + R++ T N +I+ + +G A +FS M + ++ +
Sbjct: 500 ILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTT 559
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
W ++ A+ E+AL++F +++ G KP+ VT+++++ C Q+ + + H +
Sbjct: 560 WNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYII 619
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
+ F ++++ L+D Y KCG + Y++F+ ++ +V +++MI G+AMH
Sbjct: 620 RSSF-EDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALE 678
Query: 181 XXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLL 240
M+ +G+KP++V F +L ACSH G + +G + + + +G+ P +E + C+VDLL
Sbjct: 679 TFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLL 738
Query: 241 SRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYV 300
+R G + EA + + + N +WG LLG C+ + + L L K++ + G Y+
Sbjct: 739 ARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYI 798
Query: 301 VMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
V+SN+YA +W+ V +R++M+++ +KK GCS I ++ + FV GD +HPQ I+
Sbjct: 799 VLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYS 858
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 159/326 (48%), Gaps = 11/326 (3%)
Query: 9 CGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
CG H+ ++ D++ N +++ + VG A LF +M R++ SW ++I G
Sbjct: 269 CGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGY 328
Query: 69 AKCGMCEEALKVFSEM-EKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL-R 126
A G ++L VF + + + VT+V++L ACAQL +L+ GK VH + + FL
Sbjct: 329 ALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFE 388
Query: 127 NVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI 186
+ NAL+ Y KCG +EE Y F + + ++SW+S++ F M+
Sbjct: 389 DTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVML 448
Query: 187 RVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV----PGVEHYGCLVDLLSR 242
++ ++P+ VT + ++H C+ + V K + + R ++ P V + ++D S+
Sbjct: 449 KLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGN--AILDAYSK 506
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVM 302
G +E A ++ N+S N V +L+ G + A +S+ DL + +M
Sbjct: 507 CGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTT---WNLM 563
Query: 303 SNVYAEAGKWEEVSRIRRLMKSRGVK 328
VYAE E+ + ++++G+K
Sbjct: 564 VRVYAENDCPEQALELFLKLQTQGMK 589
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 36/298 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL++YA CG +FD+ + D WNI+++ GY + ++
Sbjct: 84 LLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLS-----GYSRSGKND------------ 126
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS-KPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+ +KVF M G P+ VT+ VL CA+ G+L GKSVH +
Sbjct: 127 -------------ADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVI 173
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLE-EGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXX 179
+GF + + NAL+ MY KCG + + Y VF+ + + VVSW++MI G A +
Sbjct: 174 KSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAF 233
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHV--GLVDK-GRALLTIMRRDYGIVPGVEHYGCL 236
M++ +KPNY T +L C+ + + GR + + + + + V L
Sbjct: 234 SLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNAL 293
Query: 237 VDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLL 294
+ + GR +EA + M + V W ++ G L+ + + +L L++L
Sbjct: 294 LSFYLKVGRTKEAESLFWAMDA-RDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEML 350
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 150/347 (43%), Gaps = 33/347 (9%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ YA CG A F + ++D+ +WN ++ + L M + ++R
Sbjct: 396 LVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPD 455
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV---------AVLVACAQLGDLEFG 112
+ I L C L+V E G +++ A+L A ++ G++E+
Sbjct: 456 SVTI--LTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYA 513
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
+ + RN+ CN+LI YV G + +F GM E + +W+ M+ +A +
Sbjct: 514 NKMFQNLSEK---RNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAEN 570
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIV----- 227
+ GMKP+ VT + ++ C+ + V ++R+ +G +
Sbjct: 571 DCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVH-------LLRQCHGYIIRSSF 623
Query: 228 PGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRH 287
+ G L+D ++ G + A ++ + SV + V++ A++GG +H A E H
Sbjct: 624 EDLHLKGTLLDAYAKCGIIGYAYKIFQS-SVDKDLVMFTAMIGGYAMHGMSEKALETFSH 682
Query: 288 LSKLDLLNDGYYVVMSNVY---AEAGKWEEVSRI-RRLMKSRGVKKT 330
+ + + D +V+ +++ + AG+ E +I + K G+K T
Sbjct: 683 MLNMGIKPD--HVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPT 727
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 23/274 (8%)
Query: 53 MPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS--KPNEVTVVAVLVACAQLGDLE 110
M QRN +W S I L EAL F KD + KP+ + A+L +C+ L
Sbjct: 1 MLQRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASN 60
Query: 111 FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA 170
GK +H + G + AL++MY KCG L++ +++F+ V W+ ++ G++
Sbjct: 61 LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120
Query: 171 MHXXXXXXXXXXXXMIRVG--MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP 228
+ + P+ VT VL C+ G ++ G+++ Y I
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSV-----HGYVIKS 175
Query: 229 GVE----HYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
G E LV + ++ G + + + + + V W A++ G L +N +L E
Sbjct: 176 GFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAG--LAENGLLKEA- 232
Query: 285 MRHLSKLDLLNDGY----YVVMSNVYAEAGKWEE 314
S L+ G Y ++N+ ++E
Sbjct: 233 ---FSLFSLMMKGSVKPNYATVANILPVCASFDE 263
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 184/330 (55%), Gaps = 17/330 (5%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G +G A +F M RNV SWT++I G A+ + L++F M KPN T ++L
Sbjct: 157 GLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLL 216
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
AC G L G+ VH GF ++V NALI MY KCG + + +FE M + VV
Sbjct: 217 SACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVV 276
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+W+SMIVG + +G+ P+ VTF+G+L +C H GLV +G+ + M
Sbjct: 277 TWNSMIVGMRI----------------MGVNPDAVTFLGILSSCRHGGLVKEGQVYFSSM 320
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
D+G+ P ++HY C+VDLL RAG L EA + I NM V PN V+WG+LL RLH N+ +
Sbjct: 321 V-DHGLQPELDHYSCIVDLLGRAGLLLEALDFIQNMPVCPNAVIWGSLLSSSRLHGNVWI 379
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDG 340
A L+ + ++N+YA G W +V+R+R+LMK +G+K PGCS I +
Sbjct: 380 GIRAAESRLSLEPGCSSTLLQLANLYASVGWWNQVARVRQLMKDKGLKPNPGCSWIEVKN 439
Query: 341 VVHEFVAGDETHPQAKGIFEMWEKLLVKMK 370
VH F + D+++ + GI + + L+ M
Sbjct: 440 KVHRFESQDKSNSRMNGILLIMDSLVDHMS 469
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L C D G H A GF+ NVYV ++LI +Y +CG L + YRVF+ M R V
Sbjct: 115 LSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNV 174
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL-LT 218
VSW+++I GFA M + +KPNY T+ +L AC G + GR +
Sbjct: 175 VSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQ 234
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRL 274
I++ + VE+ L+ + S+ G + +A + NM V + V W +++ G R+
Sbjct: 235 IIQMGFHCYLHVEN--ALIAMYSKCGVIVDALYIFENM-VSKDVVTWNSMIVGMRI 287
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 190/345 (55%), Gaps = 9/345 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSM-PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK--D 87
N ++ + G + A +FS+ R+ +W +I G K G+ EA+ F EM K +
Sbjct: 140 NSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRN 199
Query: 88 GSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN-GFLRNVYVCNALIDMYVKCGCLEE 146
G + + +T+ ++L AC + GDL K VH F N GF + + NALID Y KCG L++
Sbjct: 200 GIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKD 259
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSH 206
+F+ + +V+W++MI + MH M+ G +PN VT +L +CSH
Sbjct: 260 SENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSH 319
Query: 207 VGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANM-SVPPNRVVW 265
GL+D+G+ + M DYG+ P EHY C+VDL SR GRLEEA +++ M S +W
Sbjct: 320 CGLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMW 379
Query: 266 GALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSR 325
GALL GC +H+N+ + E A HL +L+ N YV + +Y G VS IR M+
Sbjct: 380 GALLAGCVMHQNVKIGEVAAHHLFQLEPNNTSNYVALWGIYQSRGMVLGVSTIRGKMRDL 439
Query: 326 GVKKTPGCSSITIDGVVHEFVAGDETHPQA----KGIFEMWEKLL 366
G+ KTPGCS I I G H+F GD +HP + K ++E+ LL
Sbjct: 440 GLVKTPGCSWINIAGRAHKFYQGDLSHPLSHIICKRVYEISNTLL 484
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 146/354 (41%), Gaps = 42/354 (11%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGM 73
HA+ + + I ++++A+ +G + AR LF MPQRN+ SW +I M
Sbjct: 23 HAQTLLQSLLPNVILETDLLLAY-TKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNSM 81
Query: 74 CEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNA 133
+AL VF ++ G P+ T+ + ++ + G H G+ V V N+
Sbjct: 82 YFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLGWMCHGLVVKLGYEEIVVVNNS 141
Query: 134 LIDMYVKCGCLEEGYRVFEGMR-ERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI--RVGM 190
+++ YVKCG + + VF R +W+ MI GF M+ R G+
Sbjct: 142 VLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGI 201
Query: 191 KPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAR 250
+ +++T +L AC G + K + + + R++G L+D + G L+++
Sbjct: 202 ELDHMTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSE 261
Query: 251 EVIANMSVPPNRVVWGALLGGCRLH----KNIVLAEEAMRH---------------LSKL 291
+ + N V W ++ +H +++VL E+ M S
Sbjct: 262 NIFKTVCY-VNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHC 320
Query: 292 DLLNDG------------------YYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
LL+ G +Y M ++++ G+ EE ++ MKS V
Sbjct: 321 GLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSV 374
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 190/337 (56%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y E A +F++MP++D+ +W MI G +G A +LF ++ +++ W
Sbjct: 329 LISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVW 388
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
T +I G EEAL F M ++ +PN +T+ +VL A A L L G +H
Sbjct: 389 TVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVLK 448
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
++ + N+LI Y KCG + + Y++F + E VVS++S+I GFA +
Sbjct: 449 MNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEEALSM 508
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M ++PN VTF+ VL AC+H GL+++G L M+ YGI P +HY C+VDLL
Sbjct: 509 YKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEADHYACMVDLLG 568
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
RAG L+EA + +M + P+ VWGALL H+ I LA+ A +H+++L+ N YVV
Sbjct: 569 RAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKLAAQHITELEPANATPYVV 628
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
+SN Y+ +G+ E +R+ +G+KK+PGCS ITI
Sbjct: 629 LSNTYSASGQKFEGDLVRKTKNLKGIKKSPGCSWITI 665
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 8/296 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVG-YVGAARDLFSSMPQRNVRS 60
+L +YA G+ AR +FD+MP+R AT+N MI+ I G V A +LF+S RN S
Sbjct: 67 MLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVS 126
Query: 61 WTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
+ ++I GL K + A K++ E + P V A++ ++G E +++ F
Sbjct: 127 YAAMIMGLVKARKFDLAEKLYREAPHEFRDP--VCSNALINGYLKIG--EMNEALRVFEN 182
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
R+V +A++ + G ++ +F+ M ER VVSWS+MI G+
Sbjct: 183 VGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFG 242
Query: 181 XXXXMIRVG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M R G ++ N T ++ C + G V +G + ++ R G G ++ +
Sbjct: 243 LFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSR-LGFEFGSVLSNTIITM 301
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
S G + A++V + M + V W +L+ G + + A E + + DL++
Sbjct: 302 YSLFGYTDMAKKVFSGMG-NKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLIS 356
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 184/356 (51%), Gaps = 1/356 (0%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVI 65
YA CG+ A +FD M RDI W +++ G + +A ++FS MP++N SWT++I
Sbjct: 223 YAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALI 282
Query: 66 YGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFL 125
G A+ GM +AL VF +M +P+E T + L ACA + L+ GK +H F N
Sbjct: 283 GGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIR 342
Query: 126 RNVYVCNALIDMYVKCGCLEEGYRVFEGMRE-RTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
N V +A++DMY KCG +E R+F + VV W++MI A +
Sbjct: 343 PNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLND 402
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAG 244
M++ G+KPN T + +L+ACSH GLV G M D+G++P +EHY L+DLL RAG
Sbjct: 403 MLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRAG 462
Query: 245 RLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSN 304
E+ + + + P V +LL CR + +I + E L K + Y ++S+
Sbjct: 463 CFVESMKDLFMIDCKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIKWQPHSSAAYGLLSS 522
Query: 305 VYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+YA W V R +M R +++ S I I+ VH F D HP + ++
Sbjct: 523 IYAALVTWGLVDEARHIMDERRLRQDRSTSWIEIENEVHAFTVSDGLHPLKETLYS 578
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 32/301 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+H+Y CG+ AR +FDKM R++ +WN MI+ + +G + AR +F MP+++ SW
Sbjct: 87 LIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSW 146
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
+++ G A CG EAL+ + M + NE T +VL+ C +L + E + +H
Sbjct: 147 NAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVV 206
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GFL NV V ++++D Y KCG +E+ R+F+ M R + +W++++ G+A+
Sbjct: 207 VGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEM 266
Query: 182 XXXM---------------IRVGM----------------KPNYVTFIGVLHACSHVGLV 210
M R GM +P+ TF L AC+ + +
Sbjct: 267 FSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASL 326
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
G+ + + R+ I P +VD+ ++ G +E AR + + V+W ++
Sbjct: 327 KHGKQIHAFLLRN-NIRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMIS 385
Query: 271 G 271
Sbjct: 386 A 386
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 125 LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXX 184
+RN+Y N +I YVK G +++ VF M E+ VSW++M+VG+A
Sbjct: 109 VRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGW 168
Query: 185 MIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL---LTIMRRDYGIVPGVEHYGCLVDLLS 241
M RV + N TF VL C + + R + + ++ G + V +VD +
Sbjct: 169 MRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVV----GFLSNVVVSSSIVDAYA 224
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
+ G++E+A + +M+V + W L+ G L ++ A E + K
Sbjct: 225 KCGKMEDAMRLFDDMTV-RDIPAWTTLVSGYALCGDMDSAAEMFSQMPK 272
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 184/336 (54%), Gaps = 3/336 (0%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ Y G + R +FD M ++++ + +I+ +N G+ A +F ++V +
Sbjct: 183 LIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVF 242
Query: 62 TSVIYGLAKCG-MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
++I G +K +L+V+ +M++ +PN T +++ AC+ L E G+ V
Sbjct: 243 NAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLM 302
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXX 180
F + + +ALIDMY KCG + + RVF+ M E+ V SW+SMI G+ +
Sbjct: 303 KTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALE 362
Query: 181 XXXXM-IRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M I + PN+VTF+ L AC+H GLV++G + M +Y + P +EHY C+VDL
Sbjct: 363 LFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDL 422
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN-DGY 298
L RAG L +A E + M PN VW ALL CR+H NI +A+ A L KL+ G
Sbjct: 423 LGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFKLNAYGRPGA 482
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
YV +SN A+AGKW+ VS +R +MK +G+ K CS
Sbjct: 483 YVALSNTLADAGKWDNVSELREVMKEKGISKDTACS 518
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 123/309 (39%), Gaps = 75/309 (24%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL LY R+AR +FD + R ++ +N MI
Sbjct: 78 LLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIG-------------------------- 111
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL------VACAQLGDLEFGKSV 115
G K G +E+L +F ++ G KP+ T +L V+ +GDL G+ V
Sbjct: 112 -----GYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDL--GRMV 164
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGF------ 169
H ++ +C ALID YVK G + G VF+ M E+ V+S +S+I G+
Sbjct: 165 HAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFF 224
Query: 170 --------------------------AMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ M R+ +PN TF ++ A
Sbjct: 225 DDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGA 284
Query: 204 CSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
CS + + G + +M+ + V ++ L+D+ S+ GR+ +A+ V +M + N
Sbjct: 285 CSVLAAFEIGEQVQAQLMKTPFFAV--IKLGSALIDMYSKCGRVIDAQRVFDHM-LEKNV 341
Query: 263 VVWGALLGG 271
W +++ G
Sbjct: 342 FSWTSMIDG 350
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 194/362 (53%), Gaps = 4/362 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
++ LY CG R+A L++ + + + +I + G + A+ LF S+ +RN W
Sbjct: 302 IVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVW 361
Query: 62 TSVIYGLAKCGMCEEALKVFSE-MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAK 120
T++ G AK CEE K+F + + ++ P+ + ++ VL ACA L GK +H +
Sbjct: 362 TALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYIL 421
Query: 121 GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM--RERTVVSWSSMIVGFAMHXXXXXX 178
+ + +A++DMY KCG + + F+ M R+R V+ ++ MI G+A H
Sbjct: 422 RMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKA 481
Query: 179 XXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVD 238
M++ +KP+ VTF+ +L AC H GLV++G M DY ++P + HY C+VD
Sbjct: 482 IQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISME-DYSVLPEINHYACMVD 540
Query: 239 LLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGY 298
+ RA +LE+A E + + + + +WGA L C+++ N L +A L K+
Sbjct: 541 MYGRANQLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSLVNKAEEELLKIGADTGSR 600
Query: 299 YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGI 358
V ++NVYA G W E+ RIR+ M+ + KK GCS I ++ +H F +GD +H +A I
Sbjct: 601 CVQLANVYASEGNWNEMGRIRKKMRVKEAKKLTGCSWIYVENGIHAFTSGDTSHAKADAI 660
Query: 359 FE 360
+
Sbjct: 661 YS 662
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 165/395 (41%), Gaps = 82/395 (20%)
Query: 2 LLHLYASCGETRHARLM---FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRN- 57
L+++Y+ CG R A + FD + D+ + N M+A G + A ++F + N
Sbjct: 168 LINMYSKCGLFRDACSVVSGFDGVV--DLVSKNAMVAACCREGEMDMALNVFWKNHELND 225
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
SW ++I G A+ G ++AL +F +M + G + +E T+ +VL C+ L L+ GK VH
Sbjct: 226 TVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHA 285
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCG---------------------CLEEGY-------- 148
+ N + N ++ + ++D+Y KCG L GY
Sbjct: 286 WVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMK 345
Query: 149 --RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI-RVGMKPNYVTFIGVLHACS 205
R+F+ + ER V W+++ G+A + R + P+ + I VL AC+
Sbjct: 346 AQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACA 405
Query: 206 HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL-----------EEAREVI- 253
+ G+ + T + R + + +VD+ S+ G + + R+VI
Sbjct: 406 TQATLSLGKQIHTYILR-MRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVIL 464
Query: 254 ------------------------ANMSVPPNRVVWGALLGGCRLHKNIVLAEE----AM 285
+V P+ V + ALL CR H+ +V E +M
Sbjct: 465 YNVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACR-HRGLVEQGEIFFISM 523
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRR 320
S L +N +Y M ++Y A + E+ R
Sbjct: 524 EDYSVLPEIN--HYACMVDMYGRANQLEKALEFMR 556
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 43/361 (11%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+HLY+ G + A +FD++P + +WN +I I + AR +F S R++ S+
Sbjct: 33 LIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDSAVDRDLVSY 92
Query: 62 TSVIYG-LAKCGMCEEALKVFSEME--KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
S++ + G EA+ +F +M+ +D +E ++ ++ A+L + +GK +H +
Sbjct: 93 NSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCYGKQMHSY 152
Query: 119 AKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM-----------------RE----- 156
+ + ++LI+MY KCG + V G RE
Sbjct: 153 MVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAMVAACCREGEMDM 212
Query: 157 -----------RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS 205
VSW+++I G+A + M G++ + T VL CS
Sbjct: 213 ALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCS 272
Query: 206 HVGLVDKGRALLT-IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
+ + G+ + +++ DY + +VDL + G + A V A + + V
Sbjct: 273 GLKHLKLGKCVHAWVLKNDYNSNQFIS--SGIVDLYCKCGNIRYAELVYAGIGIKSQFAV 330
Query: 265 WGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKS 324
++G + + +A R L N + + + YA++ + EEV ++ R +
Sbjct: 331 SSLIVGYSSQGEMM----KAQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVT 386
Query: 325 R 325
R
Sbjct: 387 R 387
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 219 bits (559), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 188/337 (55%), Gaps = 3/337 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +A + A+R +F M +R++ SW S++ G G +EA+ +F +M
Sbjct: 154 DLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDML 213
Query: 86 KDGSK--PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
+D P+ T+V VL A A+ D+ G +H + G + V LI +Y CG
Sbjct: 214 RDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGY 273
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+ VF+ + +R V+ WS++I + MH ++ +G+ + + F+ +L A
Sbjct: 274 IRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSA 333
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
CSH G+ ++G L M YG+V G HY C+VDLL RAG LE+A E+I +M + P +
Sbjct: 334 CSHAGMHEEGWHLFQTMET-YGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKN 392
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
V+GALLG R+HKNI LAE A L LD N G YV+++ +Y + G+W++ +R+R++++
Sbjct: 393 VYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYEDEGRWKDAARLRKIIR 452
Query: 324 SRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFE 360
+ +KK G SS+ ++ +F DETHP IFE
Sbjct: 453 EKEIKKPIGYSSVELESGHKKFGVNDETHPLTTEIFE 489
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 15/302 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F + +R+V W +VI G A G EAL V++ M G+ PN T VL AC
Sbjct: 73 ARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGA 132
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
D G+ +H G +++V NA + Y KC +E +VF+ M ER +VSW+SM
Sbjct: 133 ERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSM 192
Query: 166 IVGFAMHXXXXXXXXXXXXMIR---VGMKPNYVTFIGVLHACSHVGLVDKGRAL-LTIMR 221
+ G+ + M+R +G P+ T + VL A + + G + I++
Sbjct: 193 MSGYIANGYVDEAVMLFCDMLRDDGIGF-PDNATLVTVLPAFAEKADIHAGYWIHCYIVK 251
Query: 222 RDYGIVPGVEHYGC-LVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLHKNI 278
+ P V GC L+ L S G + A+ V + P+R +VW A++ +H
Sbjct: 252 TGMKLDPAV---GCGLITLYSNCGYIRMAKAVFDQI---PDRNVIVWSAIIRCYGMHGFA 305
Query: 279 VLAEEAMRHLSKLDLLNDGY-YVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
A R L +L L DG ++ + + + AG EE + + M++ GV K +
Sbjct: 306 QEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTMETYGVVKGEAHYACM 365
Query: 338 ID 339
+D
Sbjct: 366 VD 367
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 184/344 (53%), Gaps = 10/344 (2%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +YA A+ +F+++P I N MI G + A +F MP R+V SW
Sbjct: 125 LLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSW 184
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGS------KPNEVTVVAVLVACAQL---GDLEFG 112
T+++ G A G A++ F M + KPNE T V+VL +C +L G L+FG
Sbjct: 185 TTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFG 244
Query: 113 KSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMH 172
+ VH + G V+V +LI++Y K GCL VF M R V +W++MI A +
Sbjct: 245 RQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMVVREVCTWNAMISSLASN 304
Query: 173 XXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEH 232
M G+KPN +TF+ VL AC+ G V +G L M + +VP +EH
Sbjct: 305 GREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQVVPVMEH 364
Query: 233 YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLD 292
YGC+VDLL RAG ++EA E+I NM PP++ V GA LG CR+H I L EE + L KL
Sbjct: 365 YGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELGEEIAKML-KLQ 423
Query: 293 LLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+ G Y+++S++YAE +W + +R + G+ K P S +
Sbjct: 424 TQHCGQYLLLSSMYAEKERWNHAADLRNEIMEAGIHKIPAFSMV 467
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 184/327 (56%), Gaps = 3/327 (0%)
Query: 10 GETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLA 69
G+ HA + M +I +N + G+ AR++F M +R+V SWT+++ A
Sbjct: 175 GKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYA 234
Query: 70 KCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR-N 127
+ G C EA++VF +M G ++PNE TVV VL ACA +G L G VH + + L +
Sbjct: 235 RGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVD 294
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
+ NAL++MYVKCG ++ G +VF + + V+SW ++I G AM+ M+
Sbjct: 295 GNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQMFSHMLV 354
Query: 188 VGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLE 247
G+ P+ VTFIG+L ACSHVGLV +G MR YGIVP + HYGC+VD+ RA E
Sbjct: 355 HGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYGRASLFE 414
Query: 248 EAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYA 307
EA + M V +W ALL C+ H N ++E + + + G ++SN+YA
Sbjct: 415 EAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQIHDKN-VGVGTLALLSNIYA 473
Query: 308 EAGKWEEVSRIRRLMKSRGVKKTPGCS 334
+ +W++ + +R++M+ G+KK G S
Sbjct: 474 SSERWDDANNVRKIMRGTGLKKVAGLS 500
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 137/269 (50%), Gaps = 17/269 (6%)
Query: 14 HARLM-----FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGL 68
HARL+ FD + N ++ ++ V +A +F S+P +V SWTS+I GL
Sbjct: 81 HARLIKSGHIFDGFIK------NTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGL 134
Query: 69 AKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLR-N 127
+KCG EA++ FS + KPN +T+V+ + AC+ +G ++FGK++H + + + N
Sbjct: 135 SKCGFETEAIEAFSSIN---VKPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGN 191
Query: 128 VYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIR 187
+ NA +D+Y KCG VF M +R V+SW+++++ +A MI
Sbjct: 192 IVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIV 251
Query: 188 VG-MKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRL 246
G +PN T + VL AC+ +G + G + + + + LV++ + G +
Sbjct: 252 SGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDM 311
Query: 247 EEAREVIANMSVPPNRVVWGALLGGCRLH 275
+ +V NM V + + WG ++ G ++
Sbjct: 312 KMGLKVF-NMVVHKDVISWGTVICGLAMN 339
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 4/188 (2%)
Query: 82 SEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKC 141
++M S N T L AC G +H +G + + ++ N L+ Y+
Sbjct: 47 NQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSS 106
Query: 142 GCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVL 201
+ RVF+ + VVSW+S+I G + + +KPN +T + +
Sbjct: 107 NDVVSATRVFKSIPSPDVVSWTSLISGLS---KCGFETEAIEAFSSINVKPNALTLVSAI 163
Query: 202 HACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPN 261
ACS +G + G+A+ + I + Y +DL ++ G AR V MS +
Sbjct: 164 SACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMS-KRD 222
Query: 262 RVVWGALL 269
+ W LL
Sbjct: 223 VISWTTLL 230
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 179/339 (52%), Gaps = 6/339 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMP-QRNVRS 60
LL+ Y C HA +FD+ P R+ WN +IA V + A +LF+ M N +
Sbjct: 93 LLNFYGHCVSLNHAHQLFDETPHRNDVIWNSIIALYSRVQNITTAVNLFNEMDVPPNEST 152
Query: 61 WTSVIYGLAKCGMCEEALKVFS---EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
+ +I L+ + K S M KP +T++A++ A + L K +H
Sbjct: 153 FNPIIAALSLSNQNNASFKAISFYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHG 212
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMR--ERTVVSWSSMIVGFAMHXXX 175
+A N + + + LI+ Y +CGCL + VF+ MR ++ VV WS++I A+H
Sbjct: 213 YAMRNDIDSHPQLSSGLIEAYGRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHGEA 272
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M G+KP+ +TF+ VL ACSH GL D+ M RDYG+ P EHY C
Sbjct: 273 KEALEFFQEMEVSGVKPDGITFLAVLKACSHAGLDDEALCFFMKMHRDYGVEPNSEHYSC 332
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
LVD+LSRAGRL EA EVI M V WGALLG C + + LAE A + L++++ N
Sbjct: 333 LVDVLSRAGRLYEAYEVIKGMPVKVTAKAWGALLGACTNYGELGLAEIAGKALAEVEPDN 392
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
YV+++ +YA G+ EE R+ R MK +GVK T G S
Sbjct: 393 AANYVLLAKIYASVGRREEADRMIREMKEKGVKTTSGTS 431
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 192/343 (55%), Gaps = 9/343 (2%)
Query: 5 LYASCGET---RHARLMFDKMPQRDIATWNIMIAHLINV----GYVGAARDLFSSMPQRN 57
L ++CG+ +H + + +++I + +M LI++ + +F ++
Sbjct: 322 LLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKR 381
Query: 58 VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR 117
W +V+ G + A+++F EM + +P+ T ++L A A L DL+ ++H
Sbjct: 382 TAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHC 441
Query: 118 FAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE--GMRERTVVSWSSMIVGFAMHXXX 175
+ GFL + V + L+D+Y KCG L +++F+ ++++ ++ W+++I + H
Sbjct: 442 YLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYG 501
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGC 235
M++ G KPN VTF VLHACSH GLVD+G +L +M + Y ++P V+HY C
Sbjct: 502 EMAVSLFNQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPSVDHYTC 561
Query: 236 LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLN 295
+VDLL RAGRL +A +I M + N VWGALLG C +H+N+ L E A R +L+ N
Sbjct: 562 IVDLLGRAGRLNDAYNLIRTMPITHNHAVWGALLGACVIHENVELGEIAARWTFELEPEN 621
Query: 296 DGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITI 338
G YV+++ +YA G+W + R+R ++ G++KTP S + +
Sbjct: 622 TGNYVLLAKLYAAVGRWRDAERVRNMVNEVGLRKTPANSLVEL 664
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 129/253 (50%), Gaps = 7/253 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N ++A +NVG AAR +F M +R V SW ++I GL + E+AL+V+S M +G
Sbjct: 153 NSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVG 212
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
+ TVV+VL AC L ++E G+ V G+ NV V NAL+DMYVKCG +EE +
Sbjct: 213 VDCATVVSVLQACGVLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLL 272
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLV 210
GM E+ VV+W+++I G+ ++ M G+KPN V+ +L AC + +
Sbjct: 273 LNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSL 332
Query: 211 DKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV-WGALL 269
G+ L R I V L+D+ ++ + +V M R W A+L
Sbjct: 333 KHGKCLHAWAIRQ-NIESEVVMETALIDMYAKCNEGNLSYKVF--MKTSKKRTAPWNAVL 389
Query: 270 GGC---RLHKNIV 279
G RL +N V
Sbjct: 390 SGFVHNRLARNAV 402
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 116/229 (50%), Gaps = 7/229 (3%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACA 104
A LF +P+RN+ SW +++ + G +AL +F EM G + P+ T V+ AC+
Sbjct: 66 ASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACS 125
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+L ++ G VH GF N +V N+L+ MY+ G E VFE M+ERTVVSW++
Sbjct: 126 ELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNT 185
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL--LTIMRR 222
+I G + M+ G+ + T + VL AC + V+ GR + LT+ +
Sbjct: 186 LINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKG 245
Query: 223 DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+G V L+D+ + G +EEAR ++ M + V W L+ G
Sbjct: 246 YWG---NVVVRNALLDMYVKCGEMEEARLLLNGME-EKDVVTWTTLING 290
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 4/255 (1%)
Query: 17 LMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEE 76
L +K ++ N ++ + G + AR L + M +++V +WT++I G G
Sbjct: 240 LTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARS 299
Query: 77 ALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALID 136
AL + M+ +G KPN V+V ++L AC L L+ GK +H +A V + ALID
Sbjct: 300 ALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETALID 359
Query: 137 MYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVT 196
MY KC Y+VF ++ W++++ GF + M+ ++P+ T
Sbjct: 360 MYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPT 419
Query: 197 FIGVLHACSHVGLVDKGRAL-LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN 255
F +L A + L D +A+ + G + +E LVD+ S+ G L A ++
Sbjct: 420 FNSLLPA--YAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDM 477
Query: 256 MSVP-PNRVVWGALL 269
+ + + ++W A++
Sbjct: 478 IPLKDKDIIIWTAII 492
>Medtr6g091880.1 | PPR containing plant-like protein | HC |
chr6:34616147-34614592 | 20130731
Length = 446
Score = 216 bits (549), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 203/388 (52%), Gaps = 34/388 (8%)
Query: 83 EMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG 142
E+ G+ + +++L C L LE GK VH F + + F NV +CN LI +YVKCG
Sbjct: 89 ELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCG 148
Query: 143 CLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLH 202
+++ +VF+ M +R V S + MI G+ ++ M + G+ P+ TF VL
Sbjct: 149 SVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMRQQGVVPDEETFALVLA 208
Query: 203 ACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR 262
C+ V V++G M+ +YGIVPG+EHY +V++ AGRL+EA E I NM +
Sbjct: 209 VCALVDGVEEGLMQFESMK-EYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEAGV 267
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
+W L R+H ++ + A D V+ A A K R
Sbjct: 268 ELWETLRNFARIHGDLEREDCA-----------DELLTVLDPSKAAADKVPLPQR----- 311
Query: 323 KSRGVKKTPGCSSITIDGVVHEFVAG----DETHPQAKGIFEMWEKLLVKMKMKGYIPDT 378
KK + + V E+ +E + +G L +M+ GY+PDT
Sbjct: 312 -----KKQSAINMLEEKNRVSEYRCNMPYKEEGDVKLRG-------LTGQMREAGYVPDT 359
Query: 379 SVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSE 438
VL D+ D ++KE L HSE+LA+ YGLI+T P ++RI+KNLR+C DCH A K++S+
Sbjct: 360 RYVLHDI-DEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSK 418
Query: 439 IENREIVVRDRNRFHCFKDGACTCKDYW 466
I RE++VRD RFH FKDG C+C DYW
Sbjct: 419 IVGRELIVRDNKRFHHFKDGKCSCGDYW 446
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
++ N +I + G V AR +F MP RNV S +I G G+ + L VF +M
Sbjct: 133 NVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQMR 192
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ G P+E T VL CA + +E G K G + + +++++ G L+
Sbjct: 193 QQGVVPDEETFALVLAVCALVDGVEEGLMQFESMKEYGIVPGMEHYLGVVNIFGCAGRLD 252
Query: 146 EGYRVFEGMR-ERTVVSWSSM 165
E + E M E V W ++
Sbjct: 253 EAHEFIENMPIEAGVELWETL 273
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/293 (41%), Positives = 174/293 (59%), Gaps = 1/293 (0%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F +P +N+ WT++I G A+ EAL +F M G +PN T+ +VL CA+
Sbjct: 193 ARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCAR 252
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
G LE G+ +H F + G V + AL+ MY K G + ++F+ M ER VV+W++M
Sbjct: 253 SGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAM 312
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMK-PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
I G A H M + PN VTF+GVL AC H GL+D GR + M+ +
Sbjct: 313 ICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVH 372
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEA 284
GI P +EHYGC+VDLL R G+L EA EVI M P+ V+ GALL + + N +AE
Sbjct: 373 GIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLAASKNNGNTEVAERV 432
Query: 285 MRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSIT 337
++ + LD N G +V +SN+YAEAG+W+EVSR+R++MK +KK PG S +T
Sbjct: 433 VKQILTLDPHNHGVHVSLSNMYAEAGQWQEVSRLRKMMKEEKLKKAPGWSLVT 485
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 5/267 (1%)
Query: 14 HARLMFDKMPQRDIATWNIMIAHLIN-VGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCG 72
HA+++ AT + + ++ G + A +FSS+ + N W ++I +
Sbjct: 59 HAQMIITSRINDQFATSRLFSSFALSPFGNLEHASRIFSSLHKPNSFMWNTLIRAHQQ-Q 117
Query: 73 MCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD-LEFGKSVHRFAKGNGFLRNVYVC 131
+L ++ +M + G P + T +L AC+ L + L K VH G + +V
Sbjct: 118 QPHISLSLYIQMRRHGVIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVG 177
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N L+ Y G L + VF+ + + + W++MI G+A + M+ VG +
Sbjct: 178 NGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFE 237
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
PN T VL C+ G ++ G + MR G+ GV LV + ++ G + AR+
Sbjct: 238 PNGATLASVLSVCARSGCLELGERIHEFMRVK-GVEVGVILGTALVYMYAKNGDILTARK 296
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNI 278
+ M N V W A++ G H ++
Sbjct: 297 LFDEMP-ERNVVTWNAMICGLASHGHV 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-EKDGSKPNEVTVVAV 99
G + AR LF MP+RNV +W ++I GLA G E+AL +F M E++ PN VT V V
Sbjct: 289 GDILTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGV 348
Query: 100 LVACAQLGDLEFGKSVHRFAK-GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
L AC G ++ G+ V K +G + ++D+ + G L E V +GM
Sbjct: 349 LSACCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGM 404
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 188/344 (54%), Gaps = 2/344 (0%)
Query: 29 TWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDG 88
+WN +I + VG A F P++N+ SWTS+I G + G + AL +F +M+++
Sbjct: 272 SWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNS 331
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
+ +++ AVL ACA L L GK VH G + ++V N+LI+MY KCG +E
Sbjct: 332 FQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSK 391
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
G+ ++ +VSW+SM+ F ++ M+ G++P+ VTF G+L CSH+G
Sbjct: 392 LALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLG 451
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWG-- 266
L+D+G A M +YG+V G++H C+VD+L R G + EA+ + S
Sbjct: 452 LIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQSLARKYSKTSRDKTNSCE 511
Query: 267 ALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRG 326
LLG C H ++ ++ L+ + YV++SN+Y +GKW+E +R+ M +G
Sbjct: 512 VLLGACHAHGDLGTGSSVGEYVKNLEPKKEVGYVLLSNMYCASGKWKEAEMVRKEMMDQG 571
Query: 327 VKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMK 370
VKK PGCS I I VV FV+G+ +P I ++ L ++M+
Sbjct: 572 VKKVPGCSWIEIRNVVTAFVSGNNLYPCMADISKILYFLELEMR 615
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 45/305 (14%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y C AR +FD+M + TW ++ N A ++F SMP++ +W
Sbjct: 113 LIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAW 172
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ---------------- 105
+I A+CG E L +F EM ++ +P++ T A++ AC +
Sbjct: 173 NIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIK 232
Query: 106 ----------------LGDLE-FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
LE G +V F G F N NA+ID ++K G ++
Sbjct: 233 SGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGAF--NQVSWNAIIDAHMKVGDTQKAL 290
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
F+ E+ +VSW+SMIVG+ + M R + + + VLHAC+ +
Sbjct: 291 LAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLA 350
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHY----GCLVDLLSRAGRLEEAREVIANMSVPPNRVV 264
++ G+ + + + I G++ Y L+++ ++ G +E ++ + ++ + V
Sbjct: 351 ILVHGKMVHSCI-----IHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGIN-DKDLVS 404
Query: 265 WGALL 269
W ++L
Sbjct: 405 WNSML 409
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Query: 34 IAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK-DGSKPN 92
I L G + AR LF MP+R+ +W +++ ++ G+ ++ +F M + SKP+
Sbjct: 12 IVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPD 71
Query: 93 EVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFE 152
+ A + +CA D+ FG +H +G+ ++ V NALIDMY KC + +VF+
Sbjct: 72 NFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFD 131
Query: 153 GMRERTVVSWSSMIVGFA 170
M V+W S++ +A
Sbjct: 132 EMNYSNEVTWCSLLFAYA 149
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 176/324 (54%), Gaps = 33/324 (10%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ +Y C + + +F++ +RD+ WN +I+ I+V +
Sbjct: 457 LIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHY------------------ 497
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
EEA+ +F M + PN T+V VL AC+ L LE G+ +HR+
Sbjct: 498 -------------EEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINE 544
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXX 181
GF N+ + AL+DMY KCG LE+ VF+ M E+ V+ W++MI G+ M+
Sbjct: 545 KGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEI 604
Query: 182 XXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLS 241
M +KPN +TF+ +L AC+H GLV++G+ + M + Y + P ++HY C+VDLL
Sbjct: 605 FNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCMVDLLG 663
Query: 242 RAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVV 301
R+ LEEA E++ +M +PP+ VWGALL C+ H I + ++ + NDGYY++
Sbjct: 664 RSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIM 723
Query: 302 MSNVYAEAGKWEEVSRIRRLMKSR 325
++N+Y+ G+W+E +RR MK R
Sbjct: 724 VANMYSSIGRWDEAENVRRTMKDR 747
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK---DGSKPNEVTVVAVLVA 102
A +F +P R+V +WT+++ G + G E L+ SEM + D KPN T+ +A
Sbjct: 165 AVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLA 224
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C LGDL G+ +H NG + + ++++ MY KCG E Y+ F + + ++SW
Sbjct: 225 CGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSW 284
Query: 163 SSMIVGFA 170
+SMI +A
Sbjct: 285 TSMIRVYA 292
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 12/201 (5%)
Query: 45 AARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACA 104
++ LF S+P ++ W S + L + + L +S M + PN T V + A
Sbjct: 62 SSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYA 121
Query: 105 QLGDLEFGKSVHRFAKGNGFL-RNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+ G ++H A GF N V ++ + +Y +C + + +VF+ + R VV+W+
Sbjct: 122 HFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWT 181
Query: 164 SMIVGFAMHXXXXXXXXXXXXMIRVG---MKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
++++G+ + M RVG KPN T G AC ++G + GR L ++
Sbjct: 182 ALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLV 241
Query: 221 RRDYGIVPGVEHYGCLVDLLS 241
++ GI GCL+D+ S
Sbjct: 242 VKN-GI-------GCLLDIQS 254
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 130/290 (44%), Gaps = 17/290 (5%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A FS + +++ SWTS+I A+ GM + ++ F EM ++ P+ + + +L
Sbjct: 269 AYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGN 328
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
D+ GK+ H + + V N+L+ MY K G L R+F+ + ++ W+ M
Sbjct: 329 SVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ-RSQGSIEYWNFM 387
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
IVG+ M +G++ V + + +C +G ++ GR++ + + +
Sbjct: 388 IVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGF- 446
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
+ + L+++ + ++ + + N S + ++W AL+ H ++ EEA
Sbjct: 447 VDETISVTNSLIEMYGKCDKMNVSWRIF-NRS-ERDVILWNALISA---HIHVKHYEEA- 500
Query: 286 RHLSKLDLL-------NDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
+S D++ N VV+ + + E+ R+ R + +G K
Sbjct: 501 --ISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFK 548
>Medtr6g034150.1 | PPR containing plant-like protein | HC |
chr6:11544927-11542116 | 20130731
Length = 451
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 195/372 (52%), Gaps = 17/372 (4%)
Query: 97 VAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE 156
+++L C L LE GK VH F + + F NV +CN LI +YVKCG +++ +VF+ M +
Sbjct: 95 LSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLYVKCGSVKDARKVFDKMPD 154
Query: 157 RTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL 216
R V S + MI G+ ++ M + G+ P+ TF VL C+ V V++G
Sbjct: 155 RNVGSLNLMICGYNVNGLGIDGLLVFKQMSQQGVVPDEETFALVLTVCALVDGVEEGLMQ 214
Query: 217 LTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRL-- 274
M+ +YGIVPG+EHY +V++ AGRL+EA E I NM + +W L +
Sbjct: 215 FESMK-EYGIVPGMEHYLGVVNIFGCAGRLDEAHEFIENMPIEAGVEIWETLRNFATICC 273
Query: 275 HKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCS 334
KN + A R + + D V+ A A K R KK +
Sbjct: 274 AKNTLRASVLYRRNLEREDCADELLTVLDPSKAAADKVPLPQR----------KKQSAIN 323
Query: 335 SITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKMKMKGYIPDTSVVLLDLEDAKQKEIF 394
+ V E+ P + L +M+ GY+PDT VL D+ D ++KE
Sbjct: 324 MLEEKNRVSEYRC---NMPYKEESDVKLRSLTGQMREAGYVPDTRYVLHDI-DEEEKEKA 379
Query: 395 LYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDCHAAFKLVSEIENREIVVRDRNRFHC 454
L HSE LA+ YGLI+T P ++RI+KNLR+C DCH A K++S+I RE++VRD RFH
Sbjct: 380 LQYHSECLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHH 439
Query: 455 FKDGACTCKDYW 466
FKDG C+C DYW
Sbjct: 440 FKDGKCSCGDYW 451
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 1/141 (0%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
++ N +I + G V AR +F MP RNV S +I G G+ + L VF +M
Sbjct: 125 NVELCNRLIGLYVKCGSVKDARKVFDKMPDRNVGSLNLMICGYNVNGLGIDGLLVFKQMS 184
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+ G P+E T VL CA + +E G K G + + +++++ G L+
Sbjct: 185 QQGVVPDEETFALVLTVCALVDGVEEGLMQFESMKEYGIVPGMEHYLGVVNIFGCAGRLD 244
Query: 146 EGYRVFEGMR-ERTVVSWSSM 165
E + E M E V W ++
Sbjct: 245 EAHEFIENMPIEAGVEIWETL 265
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 168/303 (55%), Gaps = 5/303 (1%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A +F +P++N+ WTS+I + + L++F M + +P+++ + L
Sbjct: 125 GNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVEPDQIVLTTAL 184
Query: 101 VACAQLGDLEFGKSVHRFAK-GNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
ACA G LE G+ +H F + G ++++ NALI+MY KCG + ++F+ R + V
Sbjct: 185 SACADAGGLEMGEWIHDFVRRKQGMKIDLHLNNALINMYAKCGDIGNARKLFDNTRNKDV 244
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+W+SMIVG A+H M + + PN VTFIGVL ACSH GLV++G+
Sbjct: 245 TTWTSMIVGHAVHGEAREALQLFSEMNFI-VSPNDVTFIGVLMACSHAGLVEEGKRNFRS 303
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIV 279
M DYGI P H+GC+VDL R+G L EA + I M VPPN V+W LLG C LH N+
Sbjct: 304 MNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVMWRTLLGACSLHGNLK 363
Query: 280 LAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITID 339
LA E L LD G V +SN+YA+ W++ +R +K K G SSI +
Sbjct: 364 LATEVRDKLINLDPGYVGDSVALSNIYADKEMWDKKIIVRNQIKQ---SKAHGFSSIEVG 420
Query: 340 GVV 342
+V
Sbjct: 421 SLV 423
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ N +I G +G AR LF + ++V +WTS+I G A G EAL++FSEM
Sbjct: 212 DLHLNNALINMYAKCGDIGNARKLFDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEMN 271
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHR-FAKGNGFLRNVYVCNALIDMYVKCGCL 144
S PN+VT + VL+AC+ G +E GK R + G ++D++ + G L
Sbjct: 272 FIVS-PNDVTFIGVLMACSHAGLVEEGKRNFRSMNEDYGIEPREPHFGCMVDLFCRSGHL 330
Query: 145 EEGYR-VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYV 195
E Y + E V W +++ ++H +I + P YV
Sbjct: 331 REAYDFIMEMPVPPNAVMWRTLLGACSLHGNLKLATEVRDKLI--NLDPGYV 380
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 111 FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFA 170
GK +H G+ + + +L+ +Y G L + ++VF+ + E+ ++ W+S+I +
Sbjct: 94 LGKQLHSLIIKFGYESIIQLQTSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYV 153
Query: 171 MHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGV 230
+ M+ ++P+ + L AC+ G ++ G + +RR G+ +
Sbjct: 154 ENHKSNKGLELFRLMLMNNVEPDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDL 213
Query: 231 EHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
L+++ ++ G + AR++ N + + W +++ G +H A EA++ S+
Sbjct: 214 HLNNALINMYAKCGDIGNARKLFDN-TRNKDVTTWTSMIVGHAVHGE---AREALQLFSE 269
Query: 291 LDLL---NDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
++ + ND ++ + + AG EE R R M
Sbjct: 270 MNFIVSPNDVTFIGVLMACSHAGLVEEGKRNFRSMN 305
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 189/342 (55%), Gaps = 7/342 (2%)
Query: 1 MLLHLYASCGETRHARLM-------FDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSM 53
+ L+L ++ + R RL+ M + N +I GYV AR++F+ M
Sbjct: 342 LFLNLISALSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRM 401
Query: 54 PQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
R++ SWTS+I G G ++A+ +F ++++ + VT++ +L A +QLG L F K
Sbjct: 402 RTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIK 461
Query: 114 SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
VH F+ +++ V N+LI Y KCG L +F+ M ER + SW++MI +AMH
Sbjct: 462 EVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHG 521
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
M + P+ VTF +L ACSH GLV++G + IM ++Y IVP HY
Sbjct: 522 NYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHY 581
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDL 293
C+VDLLSRAGRL EA ++ +M + ALL CRL+ + + E + + KL+
Sbjct: 582 SCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQILKLEP 641
Query: 294 LNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSS 335
+ G Y ++SN+ A+ G+W+EV++IR + K+ K TPG S+
Sbjct: 642 HSSGPYALVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYSA 683
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 4/247 (1%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ AR LF + ++ + ++ G + G+ EA+ VF EM K + N + ++ A
Sbjct: 290 ITKARKLFERLGNKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISA 349
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
++L D+ +S+H + + + +V + N +I Y K G + + VF MR R +VSW
Sbjct: 350 LSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSW 409
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRR 222
+SMI G+ H + R + + VT IG+L A S +G + + + R
Sbjct: 410 TSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYR 469
Query: 223 DY-GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLA 281
+ G V + L+ ++ G+L AR + M+ W A++G +H N
Sbjct: 470 FFHGKDLSVNN--SLITTYAKCGKLCTARYIFQQMT-ERCLTSWNAMIGAYAMHGNYTEV 526
Query: 282 EEAMRHL 288
E H+
Sbjct: 527 LELFDHM 533
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 6/241 (2%)
Query: 41 GYVGAARDLFSSMPQRN---VRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV 97
G VG A +F+ M R V SW ++I G + G EA ++F M P+ +T+
Sbjct: 185 GGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLA 244
Query: 98 AVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
+ C +L L G S+H + G ++ AL+D+Y K + + ++FE + +
Sbjct: 245 NAIFCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNK 303
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
V ++ M+ G+ + M++ N F+ ++ A S + + R++
Sbjct: 304 DAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIH 363
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKN 277
+ R I VE ++ ++ G + +AREV M + V W +++ G H +
Sbjct: 364 GYVLRHMHITH-VEIANQIIHAYAKFGYVVDAREVFNRMRT-RDLVSWTSMIKGYVYHGH 421
Query: 278 I 278
I
Sbjct: 422 I 422
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 95 TVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGM 154
T+ L C LG LEFG VH + F + +V ++LI +Y + G +++ ++VF+ +
Sbjct: 34 TITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRLYSQYGKIKDAHKVFDEI 93
Query: 155 RERTVVSWSSMIVGFAMHXXXXXXXXXXXXMI--RVGMKPNYVTFIGVLHACSHVGLVDK 212
+ + +++SMI + I + GM PN VT + ++HA + + + +
Sbjct: 94 TNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALRE 153
Query: 213 GRALL-TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVV--WGALL 269
G+A+ +RR+ G+ V L+D+ + G + A V A M V W AL+
Sbjct: 154 GQAVHGYAVRREIGLGDDVFE-TTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALI 212
Query: 270 GGCRLHKNIVLAEEAMRHLSKLDLLND 296
G + + A E R + ++L D
Sbjct: 213 AGYLRNGQALEAFELFRRMMCRNVLPD 239
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 46/279 (16%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+ LY+ G+ + A +FD++ +DI + MI G+ G
Sbjct: 73 LIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMIT---AYGHSGG---------------- 113
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFA-- 119
S +YG A M++ G PN VT+V+++ A A+L L G++VH +A
Sbjct: 114 -SCVYG---------AFNTAFIMQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVR 163
Query: 120 KGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV---SWSSMIVGFAMHXXXX 176
+ G +V+ L+DMY KCG + VF M R + SW+++I G+ +
Sbjct: 164 REIGLGDDVFE-TTLLDMYHKCGGVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQAL 222
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVE----H 232
M+ + P+ +T + C + + +G ++ Y I GVE
Sbjct: 223 EAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSI-----HGYMITMGVELDLVA 277
Query: 233 YGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
LVDL + + +AR++ + + VV+ ++ G
Sbjct: 278 STALVDLYCKID-ITKARKLFERLG-NKDAVVYNVMMTG 314
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 169/294 (57%)
Query: 18 MFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEA 77
+F++MP++D+ +W MI + G +G +LF ++ +++ WT +I G EEA
Sbjct: 211 VFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKDDFVWTVLISGFVSNEEYEEA 270
Query: 78 LKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDM 137
L + M ++G KPN +T+ +VL A A L L G +H ++ + N+LI
Sbjct: 271 LCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISF 330
Query: 138 YVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTF 197
Y KCG + + Y++F + E VVS +S+I GF + M ++PN VTF
Sbjct: 331 YAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLEPNRVTF 390
Query: 198 IGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMS 257
+ VL AC+H GL+++GR L M+ Y P +HY C+VDLL RAG L+EA ++I +++
Sbjct: 391 LAVLSACTHAGLIEEGRNLFDTMKSRYRNEPDADHYACMVDLLGRAGLLDEANDLIRSIT 450
Query: 258 VPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGK 311
V P+ VWGALL H + LA+ A +H++KL+ N YVV+SN+Y+ AG+
Sbjct: 451 VKPHSGVWGALLAASSAHLRLDLAKLAAQHITKLEPANATPYVVLSNLYSAAGQ 504
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 163/384 (42%), Gaps = 57/384 (14%)
Query: 2 LLHLYASCGETRHARLMFDKM--PQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVR 59
L++ Y GET A +F+ + +RD+ +W+ ++ L G +G AR LF MP+RNV
Sbjct: 77 LMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERNVV 136
Query: 60 SWTSVIYGLAKCGMCEEALKVFSEMEKDG-SKPNEVTVVAVLVACAQLGDLEFGKSVHRF 118
SW+++I G + G+ E F EM ++G + N T+ ++ C G ++ G +H
Sbjct: 137 SWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGL 196
Query: 119 AKGNGF--------------LRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
GF +++ A+I +V G + + +F+ ++E+ W+
Sbjct: 197 VSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKDDFVWTV 256
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKG-----RALLTI 219
+I GF + M R G KPN +T VL A + + +++G L
Sbjct: 257 LISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIHSHVLKMN 316
Query: 220 MRRDYGIVPGV-----------EHYGCLVDL--------------LSRAGRLEEAREV-- 252
+ D I + + Y VD+ ++ G EEA +
Sbjct: 317 LEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEEALNMYK 376
Query: 253 -IANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLND---GYYVVMSNVYAE 308
+ N S+ PNRV + A+L C H ++ + K N+ +Y M ++
Sbjct: 377 RMQNESLEPNRVTFLAVLSACT-HAGLIEEGRNLFDTMKSRYRNEPDADHYACMVDLLGR 435
Query: 309 AGKWEEVSRIRRLMKSRGVKKTPG 332
AG +E + L++S VK G
Sbjct: 436 AGLLDEAN---DLIRSITVKPHSG 456
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 21/172 (12%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAAR------DLFSSMP- 54
+L +YA G+ +AR +FDKMP+R AT+N MI+ GY+ AR +L+ +P
Sbjct: 12 MLVVYAKNGQIINARKLFDKMPERTTATYNAMIS-----GYILKARKFHLAEELYREVPC 66
Query: 55 -QRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGK 113
R+ +++ G K G EAL+VF + + SK + V+ AV+V + G + + +
Sbjct: 67 EFRDPVCSNALMNGYLKIGETNEALRVFENVGE--SKRDVVSWSAVVVGLCRDGRIGYAR 124
Query: 114 SV-HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
+ R + RNV +A+ID Y++ G E G+ F MR VV +S
Sbjct: 125 KLFDRMPE-----RNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNS 171
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 22 MPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYG-LAKCGMCEEALKV 80
M Q++I TW M+ G + AR LF MP+R ++ ++I G + K A ++
Sbjct: 1 MSQKNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEEL 60
Query: 81 FSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVK 140
+ E+ + P V A++ ++G E +++ F R+V +A++ +
Sbjct: 61 YREVPCEFRDP--VCSNALMNGYLKIG--ETNEALRVFENVGESKRDVVSWSAVVVGLCR 116
Query: 141 CGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVG-MKPNYVTFIG 199
G + ++F+ M ER VVSWS+MI G+ M R G ++ N T
Sbjct: 117 DGRIGYARKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTI 176
Query: 200 VLHACSHVGLVDKGRALLTIMRR 222
++ C + G V G + ++ R
Sbjct: 177 MIKGCGNCGGVKDGMQIHGLVSR 199
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 186/345 (53%), Gaps = 7/345 (2%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I + ++ +F + + SW ++I G A+ G+C+EA F K+ K
Sbjct: 425 NSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKE-IK 483
Query: 91 PNEVTVVAVLVACAQLGD--LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
PN+ T +VL A A D L+ G+ H G + +V AL+DMY K G + E
Sbjct: 484 PNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQ 543
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVG 208
RVF E+T SW+ MI +A H + R G + +TF+ VL AC G
Sbjct: 544 RVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKG 603
Query: 209 LVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGAL 268
+VD G + M + + I P EHY +VD+L R GRL+EA E++ + P V +L
Sbjct: 604 MVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSL 663
Query: 269 LGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVK 328
LG C+LH N+ +AE + L ++D + G YV+M+N+YAE G WE+V+ +R+ M+ RGVK
Sbjct: 664 LGSCKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVK 723
Query: 329 KTPGCSSITIDGV----VHEFVAGDETHPQAKGIFEMWEKLLVKM 369
K G S + + V +H F +GD++HP+++ I M E L ++M
Sbjct: 724 KEVGFSWVDVANVDSLHLHGFSSGDKSHPESETIDRMAEFLGLQM 768
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 145/326 (44%), Gaps = 44/326 (13%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCE--EALKVFSEMEKDG 88
N ++ G + A +F+ M R++ SW +++ G A+ G C EA+ +F M ++G
Sbjct: 226 NALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREG 285
Query: 89 SKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGY 148
+ V++ + AC +LEFGK +H A+ G+ +V VCN LI Y KC L +
Sbjct: 286 MLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAK 345
Query: 149 RVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRV-GMKPNYVTFIGVLHACSHV 207
VF+ M R VVSW+++I +RV G+ PN VTFIG+LHA +
Sbjct: 346 AVFQDMSARNVVSWTTLI------SIDEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIR 399
Query: 208 GLVDKG-------------------RALLTIMRRDYGI-----------VPGVEHYGCLV 237
+V +G +L+T+ + I G + L+
Sbjct: 400 NMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALI 459
Query: 238 DLLSRAGRLEEAREVI--ANMSVPPNRVVWGALLGGCRLHKNIVL--AEEAMRHLSKLDL 293
++ G +EA A + PN+ +G++L ++I L + HL KL L
Sbjct: 460 SGYAQNGLCKEAFLTFLSAIKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGL 519
Query: 294 LNDGYYV-VMSNVYAEAGKWEEVSRI 318
D + + ++Y + G E R+
Sbjct: 520 NTDPFVAGALLDMYGKRGNINESQRV 545
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 16/273 (5%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
+A N++I+ + A+ +F M RNV SWT++I E + +F+ M
Sbjct: 325 VAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDE-----ENVVSLFNAMRV 379
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEE 146
DG PN+VT + +L A ++ G VH + V N+LI MY K ++E
Sbjct: 380 DGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQE 439
Query: 147 GYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACS- 205
++FE + + +SW+++I G+A + I+ +KPN TF VL+A +
Sbjct: 440 SKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIK-EIKPNQYTFGSVLNAIAA 498
Query: 206 --HVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
+ L R +++ P V G L+D+ + G + E++ V N + +
Sbjct: 499 AEDISLKHGQRCHSHLIKLGLNTDPFVA--GALLDMYGKRGNINESQRVF-NETPEKTQF 555
Query: 264 VWGALLGGCRLHKN----IVLAEEAMRHLSKLD 292
W ++ H + + L +E R S LD
Sbjct: 556 SWTGMISAYARHGDYESVMSLYKEIEREGSNLD 588
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 16/246 (6%)
Query: 49 LFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGD 108
+F + ++ SW +++ G K +AL M +G + VT L C
Sbjct: 141 VFEGLSCPDIVSWNTILSGFEKS---VDALNFACFMHLNGVVFDPVTYTTALSFCWDRDY 197
Query: 109 LE-----FGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWS 163
+ FG +H GF V++ NAL+ MY + G L+E RVF M R +VSW+
Sbjct: 198 WDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWN 257
Query: 164 SMIVGFAMHXX--XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMR 221
+M+ G+A M+R GM ++V+ G + AC + ++ G+ + + +
Sbjct: 258 AMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQ 317
Query: 222 R-DYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
+ YG V L+ S+ L +A+ V +MS N V W L+ +N+V
Sbjct: 318 KLGYGTHVAV--CNVLISTYSKCKVLRDAKAVFQDMSA-RNVVSWTTLIS--IDEENVVS 372
Query: 281 AEEAMR 286
AMR
Sbjct: 373 LFNAMR 378
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 96/234 (41%), Gaps = 18/234 (7%)
Query: 47 RDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPN--EVTVVAVLVACA 104
+LF +PQ N S + + +AL VF + N EVT+ AC
Sbjct: 38 HNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACR 97
Query: 105 QLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSS 164
G+ G +H F GF+ V V N+L+ MY K G E VFEG+ +VSW++
Sbjct: 98 --GEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNT 155
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
++ GF M G+ + VT+ L C D L +
Sbjct: 156 ILSGFE---KSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSL 212
Query: 225 GIVPGVEHYGC-------LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ G +GC LV + SR G L+EA V M++ + V W A+L G
Sbjct: 213 VVKCG---FGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTI-RDLVSWNAMLSG 262
>Medtr2g021850.1 | PPR containing plant-like protein | HC |
chr2:7450705-7448544 | 20130731
Length = 479
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 127/397 (31%), Positives = 202/397 (50%), Gaps = 32/397 (8%)
Query: 72 GMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVC 131
G +EA++ ++EK + + ++ C + LE + VHR A + V
Sbjct: 113 GKVKEAVENLQKLEKLHIHVDLQRCLQLMRICGKAKSLEEARVVHRHALQHLHPLTVSTD 172
Query: 132 NALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMK 191
N +++MY +CG L++ VF+ M E + +W +MI+ + +G+K
Sbjct: 173 NRVLEMYFECGSLDDAIDVFKSMPEYDLTTWHTMIMQLVKNGFAEDSIDIFTQFKNMGLK 232
Query: 192 PNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEARE 251
P+ FIGV ACS +G + +G M +DYGIVP + HY LV++++ G L+EA E
Sbjct: 233 PDGQMFIGVFGACSMLGDISEGMLHFESMSKDYGIVPTMAHYVSLVEMIASIGHLDEALE 292
Query: 252 VIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGK 311
I M + PN VW L+ CR+H N L + V A+AG
Sbjct: 293 FIEKMPMEPNVEVWKTLMNSCRVHGNTELGD----------------------VKAKAGL 330
Query: 312 W--EEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWEKLLVKM 369
E I++ +++ G S VHEF GD + P++ I+ + L +M
Sbjct: 331 LLGENSDLIKKNEQNKLTINPKGQSR------VHEFRNGDTSDPKSDKIYTLLRGLREQM 384
Query: 370 KMKGYIPDTSVVLLDLEDAKQKEIFLYRHSEKLALVYGLINTKPGMSIRIMKNLRVCEDC 429
K GYI +T L D+ D + KE L HSE+LA+ GL ++ +IR++KN R+C DC
Sbjct: 385 KEDGYIAETRYALHDI-DEEGKEDVLLAHSERLAVAKGLFSSPARSTIRVIKNFRICPDC 443
Query: 430 HAAFKLVSEIENREIVVRDRNRFHCFKDGACTCKDYW 466
H A K++S+I RE++++ + R H FK+G C+CKDY+
Sbjct: 444 HTALKIISKIVGRELIIQAK-RCHHFKNGLCSCKDYF 479
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEK 86
++T N ++ G + A D+F SMP+ ++ +W ++I L K G E+++ +F++ +
Sbjct: 169 VSTDNRVLEMYFECGSLDDAIDVFKSMPEYDLTTWHTMIMQLVKNGFAEDSIDIFTQFKN 228
Query: 87 DGSKPNEVTVVAVLVACAQLGDLEFGK-SVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G KP+ + V AC+ LGD+ G +K G + + +L++M G L+
Sbjct: 229 MGLKPDGQMFIGVFGACSMLGDISEGMLHFESMSKDYGIVPTMAHYVSLVEMIASIGHLD 288
Query: 146 EGYRVFEGMR-ERTVVSWSSMIVGFAMH 172
E E M E V W +++ +H
Sbjct: 289 EALEFIEKMPMEPNVEVWKTLMNSCRVH 316
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 168/296 (56%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + AR +F +P ++ + +S++ G A+ G+ EE+ +F +M ++ + T+ ++L
Sbjct: 586 GSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSIL 645
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
A + L + G +H + + G +V V ++L+ MY KCG +E+ + F+ + + ++
Sbjct: 646 GAASLLCQSDIGTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLI 705
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
W+S+I+ +A H M G++P+ VTF+G+L ACSH GLV++ L M
Sbjct: 706 GWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVEEAFFYLNSM 765
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVL 280
DY I P HY C+VD+L R+GRL EA I NM V PN ++WG LL C++H + L
Sbjct: 766 IEDYKITPSHRHYACIVDILGRSGRLREAESFINNMPVEPNALIWGTLLAACKVHGDFEL 825
Query: 281 AEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
+ A + L+ + G YV SN+ A+ +WEEV++IR + G+KK P S +
Sbjct: 826 GKLAAEKVMGLEPSDVGAYVSFSNICADGEQWEEVTKIRSSLNKTGMKKEPAWSVV 881
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 25/319 (7%)
Query: 23 PQRDIATWNIMIAHLINVGYVGA--------------------ARDLFSSMPQRNVRSWT 62
PQ + I+ AHL+ Y+ + A LF ++ Q ++ SW
Sbjct: 46 PQHNARNTKILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWN 105
Query: 63 SVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGN 122
+I G + M ++L++F M G +P+E + +VL AC L FG V N
Sbjct: 106 VMISGYVRNSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKN 165
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
GFL + YV ++DM+ K E R F V SW+++I +
Sbjct: 166 GFLSSGYVQTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLF 225
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSR 242
M R + PN TF +L AC + + G+ + + + VE +VDL ++
Sbjct: 226 SEMCRASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCGATDVFVE--TAIVDLYAK 283
Query: 243 AGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVM 302
G + EA + M V N V W A++ G + A + + + ++ + Y V
Sbjct: 284 FGCMSEAYRQFSQMQV-QNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTV-- 340
Query: 303 SNVYAEAGKWEEVSRIRRL 321
++V + K E + +++
Sbjct: 341 TSVLSACAKPELIEEAKQI 359
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 9/224 (4%)
Query: 35 AHLIN----VGYVGAARDLFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGS 89
A L+N +G VG + FS M ++ W S++ A+ AL++F+ M ++G
Sbjct: 376 AALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGV 435
Query: 90 KPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYR 149
KP+E + ++L + L VH + G + N V +L MY KCGCLEE Y
Sbjct: 436 KPDEYCIGSLLSIMSSLSLG---SQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYE 492
Query: 150 VFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGL 209
VF+ + VSW+SMI GF H M+ + P+++T I +L AC+ + L
Sbjct: 493 VFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRL 552
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVI 253
+ GR + R G+ G LV++ S+ G L AR+V
Sbjct: 553 LRTGREIHGSTFR-LGLGTNTVVGGALVNMYSKCGSLSLARKVF 595
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 2/229 (0%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + + ++F ++ SW S+I G + G ++AL++F EM P+ +T++++L
Sbjct: 485 GCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISIL 544
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVV 160
ACA L L G+ +H G N V AL++MY KCG L +VF+ + +
Sbjct: 545 TACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAF 604
Query: 161 SWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIM 220
+ SS++ G+A + M+R + T +L A S + D G L +
Sbjct: 605 ACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIGTQLHAYI 664
Query: 221 RRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALL 269
+ G+ V L+ + S+ G +E+ R+ ++ P+ + W +L+
Sbjct: 665 EK-LGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVE-KPDLIGWTSLI 711
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 119/272 (43%), Gaps = 28/272 (10%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G + A FS M +NV SWT++I G + ALK+F +M + G + N TV +VL
Sbjct: 285 GCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVL 344
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCL---EEGYRVFEGMRER 157
ACA+ +E K +H G + NV V AL++MY K G + E + + M++
Sbjct: 345 SACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDP 404
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
+ W+SM+ FA + M+R G+KP+ C L L
Sbjct: 405 GI--WASMLSSFAQNRNSGRALELFTVMLREGVKPD--------EYCIGSLLSIMSSLSL 454
Query: 218 TIMRRDYGIVPGV---EHYGC-LVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG-- 271
Y + G+ GC L + S+ G LEE+ EV V N V W +++ G
Sbjct: 455 GSQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDN-VSWASMISGFV 513
Query: 272 --------CRLHKNIVLAEEAMRHLSKLDLLN 295
RL K ++ E H++ + +L
Sbjct: 514 EHGYPDQALRLFKEMLYQEVVPDHITLISILT 545
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 201/394 (51%), Gaps = 18/394 (4%)
Query: 6 YASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGY--VGAARDLFSSMPQRNVRSWTS 63
+ S GE+ H L+ + + + N +IA + + A +F SM ++ +W S
Sbjct: 320 HKSRGESLHG-LVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNS 378
Query: 64 VIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNG 123
V+ G + G E+AL++F ++ + ++ T AV+ C+ L L+ G+ VH + G
Sbjct: 379 VLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQQVHVLSLKVG 438
Query: 124 FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXX 183
F N YV ++ + FE + W+S+I G+A H
Sbjct: 439 FDTNKYVG-------------KDAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFY 485
Query: 184 XMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRA 243
M +KP+++TF+ VL ACSH GLV++GR ++ M D+GI +EHY C VDL RA
Sbjct: 486 LMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRA 545
Query: 244 GRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMS 303
G LEE + ++ M P+ +V LLG CR NI LA + L L+ + YV++S
Sbjct: 546 GYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLS 605
Query: 304 NVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSITIDGVVHEFVAGDETHPQAKGIFEMWE 363
++Y W+E + + RLM+ RGVKK PG S I + VH F A D +HPQ+K I+E+
Sbjct: 606 DLYGRLKMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIYELLL 665
Query: 364 KLLVK-MKMKGYIPDTSVV-LLDLEDAKQKEIFL 395
+L M ++ TS++ LD D + FL
Sbjct: 666 QLKEGIMLFDNFVGQTSLLQCLDFLDGYDYQNFL 699
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%)
Query: 26 DIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEME 85
D+ T N +I + A LF MPQR+ SW +VI G + ++ + M
Sbjct: 33 DLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMR 92
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
G + T + L A+ LE G+ +H NV+ +AL+DMY KCG ++
Sbjct: 93 VSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVD 152
Query: 146 EGYRVFEGMRERTVVSWSSMIVGFA 170
+ VF M E VSW+++I G++
Sbjct: 153 DALVVFRYMPECNYVSWNTLIAGYS 177
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 12/252 (4%)
Query: 41 GYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVL 100
G V A +F MP+ N SW ++I G ++ G + A + E +G ++ TV +L
Sbjct: 149 GRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLL 208
Query: 101 VACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE---R 157
+ +H +G VCNA+I Y +C L++ RVF G R
Sbjct: 209 TLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCR 268
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRAL- 216
+V+W+SM+ + +H M G +P+ ++ GV+ CS +G +L
Sbjct: 269 DLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLH 328
Query: 217 -LTIMRRDYGIVPGVEHYGCLVDLLSRAGR-LEEAREVIANMSVPPNRVVWGALLGGCRL 274
L I R VP + L R +E+A + +M V + W ++L G
Sbjct: 329 GLVIKRGAEVSVPVSN--ALIAMYLGFDNRCMEDALRIFFSMDV-KDCCTWNSVLAG--- 382
Query: 275 HKNIVLAEEAMR 286
+ + +E+A+R
Sbjct: 383 YVQVGRSEDALR 394
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 8/166 (4%)
Query: 109 LEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVG 168
L + ++ H A +G + ++Y N LI Y KC L ++F+ M +R VSW+++I G
Sbjct: 15 LPYLQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISG 74
Query: 169 FAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI---MRRDYG 225
+ M G + TF L + ++ G+ L ++ MR +
Sbjct: 75 YVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNEN 134
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
+ G L+D+ ++ GR+++A V M N V W L+ G
Sbjct: 135 VFSG----SALLDMYAKCGRVDDALVVFRYMP-ECNYVSWNTLIAG 175
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
R++ +W S++ A VF EM+ G +P++ + V+ C+ G+S+
Sbjct: 268 RDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESL 327
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCG--CLEEGYRVFEGMRERTVVSWSSMIVGFAMHX 173
H G +V V NALI MY+ C+E+ R+F M + +W+S++ G+
Sbjct: 328 HGLVIKRGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVG 387
Query: 174 XXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR 214
+ + ++ + TF V+ CS + + G+
Sbjct: 388 RSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLGQ 428
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 169/310 (54%), Gaps = 5/310 (1%)
Query: 31 NIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSK 90
N +I+ G + A +FS + +++ SW S+I G G + L+ FS + K
Sbjct: 425 NALISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLK 484
Query: 91 PNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRV 150
PN ++ L C+ D++ GK VH + +GF + + NAL+ MY KCG L+ V
Sbjct: 485 PNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSV 544
Query: 151 FEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXM-IRVGMKPNYVTFIGVLHACSHVGL 209
F M ER ++W+++I ++ H M I G+KP++ TF VL ACSH GL
Sbjct: 545 FNEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGL 604
Query: 210 VDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIAN--MSVPPNRVVWGA 267
VD + IM YG VP V+H+ C+VDLL R+G L+EA V+ + PN + W +
Sbjct: 605 VDDATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTDGYFGAHPN-MCW-S 662
Query: 268 LLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGV 327
L C +H N+ L + R L + + N YV+++N+ AEAG+WEE +++R ++K G
Sbjct: 663 LFSACAVHGNLTLGRKVARLLLEREQNNPSVYVLLANICAEAGQWEEAAKLRDMVKQFGT 722
Query: 328 KKTPGCSSIT 337
K PGCS I+
Sbjct: 723 TKQPGCSWIS 732
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 124/271 (45%), Gaps = 5/271 (1%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL LYA + L+FD + D+ +W +++ + + + A +F MP+ V W
Sbjct: 96 LLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVW 155
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
++I G + G + A ++ +M + + + T +L C L++G+ VH
Sbjct: 156 NAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVVVK 215
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRE--RTVVSWSSMIVGFAMHXXXXXXX 179
+GFL V N+LI MY CGC+ +GY+VFE M R V++++MI GF
Sbjct: 216 SGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAF 275
Query: 180 XXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDL 239
M R + + VTF+ VL +C + + + + L M D G + +
Sbjct: 276 LMFRDMHRGSVCLSEVTFVSVLSSCCSLRVGCQAQGLAIKMGFDCGYTAV---NNATMTM 332
Query: 240 LSRAGRLEEAREVIANMSVPPNRVVWGALLG 270
S G++ EAR V M + V W ++
Sbjct: 333 YSFFGKVNEARSVFEIMEESRDLVSWNVMVS 363
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 134/286 (46%), Gaps = 11/286 (3%)
Query: 41 GYVGAARDLFSSMPQ-RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAV 99
G V AR +F M + R++ SW ++ + + E+A+ + +M ++G +P+ T ++
Sbjct: 337 GKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSL 396
Query: 100 LVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTV 159
L A L +E +H NG L V V NALI Y + G ++ +++F + +++
Sbjct: 397 LSASDSLQMVEM---IHSVLCKNG-LNKVEVLNALISSYSRNGQIKRAFQIFSDLAYKSL 452
Query: 160 VSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTI 219
+SW+S+I GF ++ ++ +KPN + L CS +D G+ +
Sbjct: 453 ISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGY 512
Query: 220 MRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLH---K 276
+ R +G + LV + S+ G L+ + V M V + + W A++ H K
Sbjct: 513 ILR-HGFDSEISLGNALVTMYSKCGFLDRSLSVFNEM-VERDTITWNAIISAYSQHGQGK 570
Query: 277 NIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLM 322
V EAM+ + + + V+S + +G ++ +RI +M
Sbjct: 571 EAVHCFEAMQISPGIKPDHATFTAVLSAC-SHSGLVDDATRIFDIM 615
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 166/307 (54%)
Query: 24 QRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSE 83
+ D +I+I G + A LF +P ++V +W+S+I G A+ G + A +F +
Sbjct: 374 ELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMD 433
Query: 84 MEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGC 143
M G + + + VL AC+ L + GK VH G+ V ALIDMY KCG
Sbjct: 434 MIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGD 493
Query: 144 LEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHA 203
+E+ +F + E +SW+S+IVG A + MI G KPN +T +GVL A
Sbjct: 494 IEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTA 553
Query: 204 CSHVGLVDKGRALLTIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRV 263
C H GLV++ + + ++G++P EHY C+VD+L +AGR EEA ++I+ M P++
Sbjct: 554 CRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKT 613
Query: 264 VWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMK 323
+W +LLG C +KN LA HL + Y+++SNVYA G W+ VS++R +K
Sbjct: 614 IWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVK 673
Query: 324 SRGVKKT 330
G K+
Sbjct: 674 KIGKKRA 680
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 18/281 (6%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
LL +Y CG R A+ +F ++P ++ +WN +I G + A LF MP+ ++ SW
Sbjct: 146 LLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSW 205
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
S+I GL AL+ S M G K +E T +VL AC +L G+ +H +
Sbjct: 206 NSIIAGLVD-NASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIK 264
Query: 122 NGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-----WSSMIVGFAMHXXXX 176
+GF + Y +ALIDMY C L E ++F+ + VS W+SM+ G ++
Sbjct: 265 SGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYV 324
Query: 177 XXXXXXXXMIRVGMKPNYVTFIGVLHAC---SHVGLVDKGRALLTIMRRDYGIVPGVEHY 233
M R G++ ++ TF VL C ++ L + + + V G
Sbjct: 325 EALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVG---- 380
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGC 272
L+D+ ++ G + A + + P++ V W +L+ GC
Sbjct: 381 SILIDIYAKQGSINNALRLFERL---PDKDVVAWSSLITGC 418
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 132/308 (42%), Gaps = 38/308 (12%)
Query: 27 IATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEM-E 85
I N MI+ + AR++F MP RN+ SWT+++ L M EAL +++EM E
Sbjct: 38 IFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIE 97
Query: 86 KDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLE 145
+PN+ AVL AC + ++E GK VH ++ + NAL+DMYVKCG L
Sbjct: 98 SKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLR 157
Query: 146 EGYRV-------------------------------FEGMRERTVVSWSSMIVGFAMHXX 174
+ RV F+ M E +VSW+S+I G +
Sbjct: 158 DAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGL-VDNA 216
Query: 175 XXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVPGVEHYG 234
M G+K + TF VL AC + GR + + + G
Sbjct: 217 SSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKS-GFESSCYCIS 275
Query: 235 CLVDLLSRAGRLEEAREVIA----NMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHLSK 290
L+D+ S L EA ++ N SV + +W ++L G ++ + V A + H+ +
Sbjct: 276 ALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHR 335
Query: 291 LDLLNDGY 298
+ D Y
Sbjct: 336 SGVRFDFY 343
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 148/362 (40%), Gaps = 81/362 (22%)
Query: 2 LLHLYASCGETRHARLMFDKM-----PQRDIATWNIMIA-HLINVGYVGAARDLFSSMPQ 55
L+ +Y+SC A +FD+ +A WN M++ H++N YV
Sbjct: 277 LIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYV------------ 324
Query: 56 RNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSV 115
EAL + S M + G + + T VL C +L V
Sbjct: 325 --------------------EALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQV 364
Query: 116 HRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXX 175
H F +G+ + V + LID+Y K G + R+FE + ++ VV+WSS+I G A
Sbjct: 365 HGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSD 424
Query: 176 XXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGR-------------------AL 216
MI +G++ ++ VL ACS + G+ AL
Sbjct: 425 KLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTAL 484
Query: 217 LTIMRRDYGIVPGVEHYGCL--VDLLS---------RAGRLEEAREVIANM---SVPPNR 262
+ + + I + +GCL +D +S + GR EEA ++ M PN+
Sbjct: 485 IDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNK 544
Query: 263 VVWGALLGGCRLHKNIVLAEEAMRHLSKLDLLNDG------YYVVMSNVYAEAGKWEEVS 316
+ +L CR H +V EEA + ++ N G +Y M ++ +AG++EE
Sbjct: 545 ITILGVLTACR-HSGLV--EEAWDVFNSIE-TNHGLIPCPEHYNCMVDILGQAGRFEEAV 600
Query: 317 RI 318
++
Sbjct: 601 KL 602
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 85/193 (44%), Gaps = 12/193 (6%)
Query: 103 CAQLGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSW 162
C + ++ KS+H +GF ++++ N +I +Y KC + + +F+ M R +VSW
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72
Query: 163 SSMIVGFAMHXXXXXXXXXXXXMIRVGM-KPNYVTFIGVLHACSHVGLVDKGRAL---LT 218
++M+ MI + +PN + VL AC V V+ G+ + +
Sbjct: 73 TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132
Query: 219 IMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNI 278
+ D IV L+D+ + G L +A+ V + N W L+ G +
Sbjct: 133 QAKLDVDIVL----MNALLDMYVKCGSLRDAQRVFCEIPC-KNATSWNTLILG---YAKQ 184
Query: 279 VLAEEAMRHLSKL 291
L ++AM+ K+
Sbjct: 185 GLIDDAMKLFDKM 197
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 169/291 (58%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
A +F R+V W+S+I A+ G ++ALK+F++M + ++PN VT++AV+ AC
Sbjct: 328 AERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTN 387
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSM 165
L + G +H + G +++VCNALI+MY KCG L++ ++F M R V+W+SM
Sbjct: 388 LSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSM 447
Query: 166 IVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYG 225
I + +H M G+K + VTF+ VL AC+H GLV +G+ L + D
Sbjct: 448 ISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCE 507
Query: 226 IVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAM 285
I +EHY CL+DL R+G+LE+A E++ M + P+ +W +L+ C+LH + +AE
Sbjct: 508 IPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLS 567
Query: 286 RHLSKLDLLNDGYYVVMSNVYAEAGKWEEVSRIRRLMKSRGVKKTPGCSSI 336
L + + N Y ++S ++AE G+W ++ ++R MK + ++K G S I
Sbjct: 568 SQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRI 618
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 10/249 (4%)
Query: 46 ARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQ 105
AR +F M +N SWT+VI G A + AL + EM+ +G PN VT++A+L ACA+
Sbjct: 226 ARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACAR 285
Query: 106 LGDLEFGKSVHRFAKGNGFLRNVYVCNALIDMYVKCG-CLEEGYRVFEGMRERTVVSWSS 164
G +++GK +H +A GF ALI +Y +CG L R+FEG R VV WSS
Sbjct: 286 PGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSS 345
Query: 165 MIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDY 224
+I +A M +PNYVT + V+ AC+++ G + + + +
Sbjct: 346 IIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILK-F 404
Query: 225 GIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNR--VVWGALLGGCRLHKNIVLAE 282
GI + L+++ ++ G L+++R++ M P+R V W +++ LH E
Sbjct: 405 GIGFSIFVCNALINMYAKCGSLDDSRKIFLEM---PSRDSVTWNSMISAYGLHG---YGE 458
Query: 283 EAMRHLSKL 291
+A++H ++
Sbjct: 459 QALQHFYEM 467
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 6/234 (2%)
Query: 43 VGAARDLFSSMPQRNVRSWTSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVA 102
+ +AR +F +MP R+ +W S+I + G+ EAL++ + G P + +++
Sbjct: 117 IESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSM 176
Query: 103 CAQLGDL--EFGKSVHRFAKGNGFLR---NVYVCNALIDMYVKCGCLEEGYRVFEGMRER 157
C + DL G+ +H +G +R +V++ A +D Y +CG VF+ M +
Sbjct: 177 CGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVK 236
Query: 158 TVVSWSSMIVGFAMHXXXXXXXXXXXXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALL 217
VSW+++I G A + M G+ PN VT I +L AC+ G V G+ +
Sbjct: 237 NEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIH 296
Query: 218 TIMRRDYGIVPGVEHYGCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGG 271
R G L+ L G+ E I S + V+W +++G
Sbjct: 297 GYAFRR-GFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGS 349
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 53/224 (23%)
Query: 2 LLHLYASCGETRHARLMFDKMPQRDIATWNIMIAHLINVGYVGAARDLFSSMPQRNVRSW 61
L+++YA CG +R +F +MP RD TWN MI+
Sbjct: 416 LINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMIS-------------------------- 449
Query: 62 TSVIYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVVAVLVACAQLGDLEFGKSVHRFAKG 121
YGL G E+AL+ F EM++ G K + VT +AVL AC G + G+ + F +
Sbjct: 450 ---AYGLH--GYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQL--FEQV 502
Query: 122 NG-----FLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVS-WSSMIVGFAMHXXX 175
N Y C LID++ + G LE+ + M + WSS++ +H
Sbjct: 503 NADCEIPITIEHYAC--LIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRL 560
Query: 176 XXXXXXXXXMIRVGMKPNYV---TFIGVLHACSHVGLVDKGRAL 216
+IR +PN T + ++HA +KGR L
Sbjct: 561 DIAESLSSQLIRS--EPNNAASYTLLSMIHA-------EKGRWL 595
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 17/235 (7%)
Query: 65 IYGLAKCGMCEEALKVFSEMEKDGSKPNEVTVV--AVLVACAQLGDLEFGKSVHRFAKGN 122
I L G+ + L+ F+++ N + V +V+ AC+ FG +H A
Sbjct: 36 IKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFIT 95
Query: 123 GFLRNVYVCNALIDMYVKCGCLEEGYRVFEGMRERTVVSWSSMIVGFAMHXXXXXXXXXX 182
G + V N++I MY K +E +VF+ M R ++W+SMI + +
Sbjct: 96 GSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQML 155
Query: 183 XXMIRVGMKPNYVTFIGVLHACSHVGLVDKGRALLTIMRRDYGIVP-----GVEH----Y 233
+G P ++ C +D G I R+ +G+V ++H
Sbjct: 156 KDFYFLGFLPKPELLASMVSMCGRE--MDLG---WRIGRQIHGLVVVDGRIRIQHSVFLS 210
Query: 234 GCLVDLLSRAGRLEEAREVIANMSVPPNRVVWGALLGGCRLHKNIVLAEEAMRHL 288
VD R G AR V M V N V W A++ GC +++ +A R +
Sbjct: 211 TAFVDFYFRCGDSLMARSVFDEMEV-KNEVSWTAVISGCANNQDYDVALACYREM 264