Miyakogusa Predicted Gene

Lj0g3v0250759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0250759.1 Non Characterized Hit- tr|I1KTW4|I1KTW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27084
PE,96.15,0,SUBFAMILY NOT NAMED,NULL; CELL CYCLE CONTROL PROTEIN
50,Protein of unknown function DUF284,
transmem,NODE_39326_length_393_cov_169.007629.path1.1
         (104 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g067760.1 | LEM3 (ligand-effect modulator 3) family protei...   201   1e-52
Medtr2g067760.2 | LEM3 (ligand-effect modulator 3) family protei...   201   1e-52
Medtr2g101400.1 | LEM3 (ligand-effect modulator 3) family protei...   162   7e-41
Medtr7g086110.1 | LEM3 (ligand-effect modulator 3) family protei...   147   2e-36
Medtr2g451450.2 | LEM3 (ligand-effect modulator 3) family protei...   133   3e-32
Medtr2g451450.1 | LEM3 (ligand-effect modulator 3) family protei...   121   2e-28

>Medtr2g067760.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:28366151-28371165 | 20130731
          Length = 348

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/104 (92%), Positives = 101/104 (97%)

Query: 1   MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
           MRTAALPTFRKLYGKIEVDL++G+ I VTL+NNYNTYSFNGKKKLVLSTTSWLGGKNDFL
Sbjct: 245 MRTAALPTFRKLYGKIEVDLNQGDLIDVTLKNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 304

Query: 61  GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGGH 104
           GIAYLTVGGLCFFL+LAFTIVYFVKPRQLGDPSYLSWNRN GGH
Sbjct: 305 GIAYLTVGGLCFFLSLAFTIVYFVKPRQLGDPSYLSWNRNQGGH 348


>Medtr2g067760.2 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:28366151-28371165 | 20130731
          Length = 348

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 96/104 (92%), Positives = 101/104 (97%)

Query: 1   MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
           MRTAALPTFRKLYGKIEVDL++G+ I VTL+NNYNTYSFNGKKKLVLSTTSWLGGKNDFL
Sbjct: 245 MRTAALPTFRKLYGKIEVDLNQGDLIDVTLKNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 304

Query: 61  GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPGGH 104
           GIAYLTVGGLCFFL+LAFTIVYFVKPRQLGDPSYLSWNRN GGH
Sbjct: 305 GIAYLTVGGLCFFLSLAFTIVYFVKPRQLGDPSYLSWNRNQGGH 348


>Medtr2g101400.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:43597997-43601669 | 20130731
          Length = 347

 Score =  162 bits (410), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 74/102 (72%), Positives = 85/102 (83%)

Query: 1   MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
           MRTAALPTFRKLYGKIE DL+  + I + +QNNYNTY F G+KKLVLSTT+W+GGKN FL
Sbjct: 243 MRTAALPTFRKLYGKIESDLEVNDEIEILIQNNYNTYEFQGRKKLVLSTTTWIGGKNRFL 302

Query: 61  GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRNPG 102
           G+AYL VGGL  F A+ F ++Y VKPR LGDPSYLSWNRNPG
Sbjct: 303 GVAYLCVGGLSLFCAIGFILLYVVKPRPLGDPSYLSWNRNPG 344


>Medtr7g086110.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr7:33402566-33400955 | 20130731
          Length = 326

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 65/100 (65%), Positives = 82/100 (82%)

Query: 1   MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
           MRTAALPTFRKLYGKIEVDL+  + I+V ++NNYNTY F G K ++LSTT+W+GGKNDFL
Sbjct: 222 MRTAALPTFRKLYGKIEVDLEANDEITVVIENNYNTYQFGGTKSVILSTTTWIGGKNDFL 281

Query: 61  GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNRN 100
           GIAY+ +GGL    +L F ++Y +KPR LGDP YL+WN+N
Sbjct: 282 GIAYILIGGLSLVYSLVFLLMYLMKPRPLGDPRYLTWNKN 321


>Medtr2g451450.2 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:22853645-22850321 | 20130731
          Length = 233

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 76/99 (76%)

Query: 1   MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
           MRTAALPTFRKLYGKIE DLD  + I V L+NNYNTYSF GKKKLVLST+SWLGGKNDFL
Sbjct: 130 MRTAALPTFRKLYGKIEEDLDADDVIVVNLKNNYNTYSFGGKKKLVLSTSSWLGGKNDFL 189

Query: 61  GIAYLTVGGLCFFLALAFTIVYFVKPRQLGDPSYLSWNR 99
           GIA L VG     +++ F +++   PR  GD +Y SWN+
Sbjct: 190 GIANLFVGTFSILISIVFLVLHMKSPRPYGDTAYSSWNK 228


>Medtr2g451450.1 | LEM3 (ligand-effect modulator 3) family protein |
           HC | chr2:22857320-22850942 | 20130731
          Length = 331

 Score =  121 bits (303), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/87 (67%), Positives = 68/87 (78%)

Query: 1   MRTAALPTFRKLYGKIEVDLDEGENISVTLQNNYNTYSFNGKKKLVLSTTSWLGGKNDFL 60
           MRTAALPTFRKLYGKIE DLD  + I V L+NNYNTYSF GKKKLVLST+SWLGGKNDFL
Sbjct: 245 MRTAALPTFRKLYGKIEEDLDADDVIVVNLKNNYNTYSFGGKKKLVLSTSSWLGGKNDFL 304

Query: 61  GIAYLTVGGLCFFLALAFTIVYFVKPR 87
           GIA L VG     +++ F +++   PR
Sbjct: 305 GIANLFVGTFSILISIVFLVLHMKSPR 331