Miyakogusa Predicted Gene

Lj0g3v0250269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0250269.1 tr|D7LU08|D7LU08_ARALL Binding protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485557
PE=4,32.18,2e-18,ARM repeat,Armadillo-type fold; HSP70 BINDING PROTEIN
HSPBP-RELATED,NULL; PROTEIN FOLDING REGULATOR,,CUFF.16379.1
         (477 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g021570.1 | armadillo/beta-catenin-like repeat protein | H...   570   e-163
Medtr3g080080.1 | nucleotide exchange factor SIL1 | HC | chr3:36...    74   3e-13

>Medtr4g021570.1 | armadillo/beta-catenin-like repeat protein | HC |
           chr4:7067247-7062577 | 20130731
          Length = 370

 Score =  570 bits (1470), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 286/370 (77%), Positives = 306/370 (82%), Gaps = 11/370 (2%)

Query: 94  MANETPNWDGLLKWSIAHSDGTRPTRDLSEEDRKWFMEAMQAQTIDVVKRMKEITLVMQT 153
           MA E PNWDGLLKWSIA+SDGTR  R+LSEEDRKWFMEAMQAQT+D+VKRMKEITLVM+T
Sbjct: 1   MAKEGPNWDGLLKWSIANSDGTRQPRNLSEEDRKWFMEAMQAQTVDIVKRMKEITLVMKT 60

Query: 154 PQQVLEDQGVTPADIEDLLDELQEHVESIDMANDLHTIGGLVPLLGHLKNSHANIRAKAA 213
           P+Q LE+QGVTPADIED+LDELQEHVESIDMANDLHTIGGL PLL +LKN HANIRAKAA
Sbjct: 61  PEQELENQGVTPADIEDMLDELQEHVESIDMANDLHTIGGLTPLLAYLKNPHANIRAKAA 120

Query: 214 DVVTTIVQNNPRSQQLVMEANGFEPLFSNFSSDPDVNARTKALGAISSLIRHNKPGITAF 273
           DVVTTIVQNNP+SQQLVMEANGFEPL SNFSSDPDV ARTKALGAISSLIRHNKPG+ AF
Sbjct: 121 DVVTTIVQNNPKSQQLVMEANGFEPLVSNFSSDPDVTARTKALGAISSLIRHNKPGVAAF 180

Query: 274 RLANGYAALKDALSSGNVRFQRKALTLIHYLLHENSSDCHIANELGFPRILMHLASSEDA 333
           RLANGYAAL+DAL+S NVRFQRKAL LIHYLL ENSSDC+I  ELG  R +MHLASS+DA
Sbjct: 181 RLANGYAALRDALTSENVRFQRKALNLIHYLLLENSSDCNIVKELGLHRTMMHLASSDDA 240

Query: 334 DVREAALQGLLELNHNTK---DVSAEDTEKMKQLLQERINSISLLSEEDLGASREERQLV 390
           DVREAAL+ L EL  NTK   D S ED EKMKQLLQERIN ISL+S EDLGA REER LV
Sbjct: 241 DVREAALKSLFELTRNTKDGSDSSPEDNEKMKQLLQERINGISLMSTEDLGAIREERLLV 300

Query: 391 DSLWVTCFNEP--------FVLPGEDAPPPDVASKHFEPPLRSWAXXXXXXXXXXXXXXX 442
           DSLW T FNEP         VLPGEDAPPPDVASKHFE PLR+ +               
Sbjct: 301 DSLWSTYFNEPSSLREKGLLVLPGEDAPPPDVASKHFESPLRASSGNPNSKKDSNNEKKD 360

Query: 443 XAPLLLGLGP 452
             PLLLG GP
Sbjct: 361 APPLLLGPGP 370


>Medtr3g080080.1 | nucleotide exchange factor SIL1 | HC |
           chr3:36220203-36216221 | 20130731
          Length = 378

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 33/271 (12%)

Query: 99  PNWDGLLKWSIAHSDGTRPTRDLSEEDRKWFMEAMQAQTIDVVKRMKEITLVMQTPQQVL 158
           P+ D +L W+I+HSD  +  ++ ++  +K     +Q       KR  EI  +M+  + +L
Sbjct: 59  PSMDSMLHWAISHSDPEK-LKESAQSHQKLSPSELQ-------KRQLEIKEIMEKTK-ML 109

Query: 159 EDQGVTPADIEDLLD---ELQEHVESI----------DMANDLHTIGGLVPLLGHLKNSH 205
            D  +    I+DL +    L++   ++          D ANDL+ +GGL  +   LK+  
Sbjct: 110 SDAELMKIAIKDLNNASTSLEDRYRALLELLELVEPLDNANDLNKLGGLHAVTQELKHYD 169

Query: 206 ANIRAKAADVVTTIVQNNPRSQQLVMEANGFEPLFSNFSSDPDVNARTKALGAISSLIRH 265
           + IRA AA V+    QNNP  QQ V+E      L +   S   +    KAL A+S+L R+
Sbjct: 170 SGIRATAAWVLGKASQNNPTFQQQVLELGVLSRLIAMVKS-SSIEEGIKALYAVSALTRN 228

Query: 266 NKPGITAFRLANGYAALKDAL--SSGNVRFQRKALTLI-----HYLLHENSSDCHIANEL 318
           N      F    G   L+D L  +S +++ +RKA+ L+     + L + N  +    N  
Sbjct: 229 NLANQELFYAEGGGLMLQDILRNASIDIKLRRKAVLLLTDLADYQLENVNKDEPPFFNNQ 288

Query: 319 GFPRILMHLASSEDADVREAAL---QGLLEL 346
              + ++ L +S D D++E AL   + LL+L
Sbjct: 289 DLLKSVVDLTASTDLDLQEKALVAIKSLLQL 319