Miyakogusa Predicted Gene
- Lj0g3v0249949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0249949.1 Non Characterized Hit- tr|I1LK89|I1LK89_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.67,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; CCR4 NOT-RELATED,NULL;
NOT2_3_5,NOT2/NOT3/NOT5,CUFF.16416.1
(659 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g096180.1 | CCR4-NOT transcription complex subunit 2 | HC ... 841 0.0
Medtr2g096180.4 | CCR4-NOT transcription complex subunit 2 | HC ... 793 0.0
Medtr4g061843.1 | CCR4-NOT transcription complex subunit 2 | HC ... 767 0.0
Medtr2g096180.2 | CCR4-NOT transcription complex subunit 2 | HC ... 763 0.0
Medtr2g096180.3 | CCR4-NOT transcription complex subunit 2 | HC ... 716 0.0
Medtr4g061843.3 | CCR4-NOT transcription complex subunit 2 | HC ... 713 0.0
Medtr4g061843.2 | CCR4-NOT transcription complex subunit 2 | HC ... 694 0.0
Medtr4g061843.4 | CCR4-NOT transcription complex subunit 2 | HC ... 662 0.0
Medtr4g061960.1 | CCR4-NOT transcription complex subunit 2 | HC ... 440 e-123
Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family ... 57 5e-08
Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family ... 57 5e-08
>Medtr2g096180.1 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057795-41063834 | 20130731
Length = 658
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/643 (67%), Positives = 482/643 (74%), Gaps = 8/643 (1%)
Query: 17 PDGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PT 74
PDG GR+F TSFS QSG ASP++ H+G IQGLHN+HGSFN+PNMP+TLTSRN TIN PT
Sbjct: 17 PDGAGRTF-TSFSSQSGAASPIYQHTGGIQGLHNMHGSFNIPNMPSTLTSRNSTINSMPT 75
Query: 75 GGVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVT 134
G VQQPT++LSSGRF SNNLP ALSQL ISVVGNPGF+ ++NGV
Sbjct: 76 GAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHGHSGVNSRGGISVVGNPGFSNNTNGVA 135
Query: 135 GSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXX 194
GSIPGILP+SAAIGNRNAVPGLGVSPILGNAG RITSSMGNMV
Sbjct: 136 GSIPGILPSSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSIPG 195
Query: 195 XXXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALN 254
QNR+MSGVLPQGSPQV+SMLGNSYPSAGG LSQSH+QA++
Sbjct: 196 LASRLNLNGNSGSGGLGVQGQNRMMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHMQAVH 255
Query: 255 NLNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQE 314
+LNSMGMLNDL+S DSSPFD+N+FPQLTSRP PI QQNQE
Sbjct: 256 HLNSMGMLNDLNSSDSSPFDLNDFPQLTSRP--SSAGGPQGQLGSLRKQGLSPIVQQNQE 313
Query: 315 FRIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFPMGRSTGFSLGGXXXX 374
F I++EDFPALPGYKGG+ +F MDMHQKEQL+DN +SMMQSQHF MGRS GFSLGG
Sbjct: 314 FSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDNTMSMMQSQHFSMGRSAGFSLGG--SY 371
Query: 375 XXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPN 434
QD LH+HGSD+FPSS+STYHSQT+GPPGIG+RP N
Sbjct: 372 SSHRSQQQHSPSVSNSGVSFSSMNNQD-LHMHGSDVFPSSNSTYHSQTNGPPGIGLRPLN 430
Query: 435 SPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLL 494
SPNT+SG G YD MSA NQSFRD MKSMQT QS+PDPFGLL
Sbjct: 431 SPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDHGMKSMQTAQSAPDPFGLL 490
Query: 495 GLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCY 554
GLLSVIRMSDPDLTSLALG+DLTTLGLNLNSSENLHKTF SPWS+EPAK DPEF+VLQCY
Sbjct: 491 GLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFSVLQCY 550
Query: 555 NAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVP 614
AK PPALHQGYF+KF++ETLFYIFYSMP+DEAQLYAA+ELYKRGWFYHKEHR+W+I+VP
Sbjct: 551 YAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRMWYIKVP 610
Query: 615 NMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVLYYEMVEKRP 657
NMEPLVKT+ YERGSYHCFDPS+F+TV++DNFV YEMVEKRP
Sbjct: 611 NMEPLVKTSTYERGSYHCFDPSTFETVRRDNFVFQYEMVEKRP 653
>Medtr2g096180.4 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057810-41063663 | 20130731
Length = 609
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/609 (66%), Positives = 454/609 (74%), Gaps = 7/609 (1%)
Query: 51 IHGSFNVPNMPNTLTSRNLTIN--PTGGVQQPTANLSSGRFASNNLPVALSQLXXXXXXX 108
+HGSFN+PNMP+TLTSRN TIN PTG VQQPT++LSSGRF SNNLP ALSQL
Sbjct: 1 MHGSFNIPNMPSTLTSRNSTINSMPTGAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHG 60
Query: 109 XXXXXXXXXISVVGNPGFNTSSNGVTGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSR 168
ISVVGNPGF+ ++NGV GSIPGILP+SAAIGNRNAVPGLGVSPILGNAG R
Sbjct: 61 HSGVNSRGGISVVGNPGFSNNTNGVAGSIPGILPSSAAIGNRNAVPGLGVSPILGNAGPR 120
Query: 169 ITSSMGNMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSP 228
ITSSMGNMV QNR+MSGVLPQGSP
Sbjct: 121 ITSSMGNMVGGGNIGRISSGGLSIPGLASRLNLNGNSGSGGLGVQGQNRMMSGVLPQGSP 180
Query: 229 QVMSMLGNSYPSAGGQLSQSHVQALNNLNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXX 288
QV+SMLGNSYPSAGG LSQSH+QA+++LNSMGMLNDL+S DSSPFD+N+FPQLTSRP
Sbjct: 181 QVISMLGNSYPSAGGPLSQSHMQAVHHLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSA 240
Query: 289 XXXXXXXXXXXXXXXXXXPIGQQNQEFRIESEDFPALPGYKGGSADFAMDMHQKEQLHDN 348
PI QQNQEF I++EDFPALPGYKGG+ +F MDMHQKEQL+DN
Sbjct: 241 GGPQGQLGSLRKQGLS--PIVQQNQEFSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDN 298
Query: 349 PVSMMQSQHFPMGRSTGFSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGS 408
+SMMQSQHF MGRS GFSLGG QDL H+HGS
Sbjct: 299 TMSMMQSQHFSMGRSAGFSLGGSYSSHRSQQQHSPSVSNSGVSFSSMNN--QDL-HMHGS 355
Query: 409 DIFPSSHSTYHSQTSGPPGIGIRPPNSPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSA 468
D+FPSS+STYHSQT+GPPGIG+RP NSPNT+SG G YD MSA
Sbjct: 356 DVFPSSNSTYHSQTNGPPGIGLRPLNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSA 415
Query: 469 ANQSFRDQSMKSMQTVQSSPDPFGLLGLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSEN 528
NQSFRD MKSMQT QS+PDPFGLLGLLSVIRMSDPDLTSLALG+DLTTLGLNLNSSEN
Sbjct: 416 VNQSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSEN 475
Query: 529 LHKTFASPWSDEPAKSDPEFTVLQCYNAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQ 588
LHKTF SPWS+EPAK DPEF+VLQCY AK PPALHQGYF+KF++ETLFYIFYSMP+DEAQ
Sbjct: 476 LHKTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQ 535
Query: 589 LYAAHELYKRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVL 648
LYAA+ELYKRGWFYHKEHR+W+I+VPNMEPLVKT+ YERGSYHCFDPS+F+TV++DNFV
Sbjct: 536 LYAANELYKRGWFYHKEHRMWYIKVPNMEPLVKTSTYERGSYHCFDPSTFETVRRDNFVF 595
Query: 649 YYEMVEKRP 657
YEMVEKRP
Sbjct: 596 QYEMVEKRP 604
>Medtr4g061843.1 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912417-22920126 | 20130731
Length = 657
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/643 (63%), Positives = 453/643 (70%), Gaps = 9/643 (1%)
Query: 18 DGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PTG 75
D GRSFATSFS QSG ASP+FHH+G IQGLHNIHGSFNVPNMP TLT RN TIN P+G
Sbjct: 18 DSAGRSFATSFSSQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTPRNSTINNIPSG 77
Query: 76 GVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVTG 135
GVQQ NLSSGRFASNNLPVALSQL SVVGNPGFN+ +NGV G
Sbjct: 78 GVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGTSVVGNPGFNSGTNGVGG 137
Query: 136 SIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXXX 195
SIPG A+IGNRNAVPGLGVSPILGNAGSRITSS+ +
Sbjct: 138 SIPGF---PASIGNRNAVPGLGVSPILGNAGSRITSSV-GNMIGGGNIGRTGGGLSVPGL 193
Query: 196 XXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALNN 255
QNRLMS VLPQGSPQ +SM GNSYPSAGG LSQSH+ A+NN
Sbjct: 194 GSRLNFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSAGGALSQSHIHAVNN 253
Query: 256 LNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQEF 315
+N+M M ND++S DSSPFD+N+FPQL+SRP PIGQQN EF
Sbjct: 254 MNTMRMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQGQLGSLRNQGLGISPIGQQNHEF 313
Query: 316 RIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFPMGRSTGFSLGGXXXXX 375
I++EDFPALPG+KGG+AD+ MDMHQKEQLHDN SMMQSQHF MGRS GFSLGG
Sbjct: 314 SIQNEDFPALPGFKGGNADYDMDMHQKEQLHDNASSMMQSQHFSMGRSAGFSLGGTYSSH 373
Query: 376 XXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPNS 435
QDLLH HGSDIFPS HS Y SQTSGPPGIG+RP NS
Sbjct: 374 RTQPQQHNPSVSSGGVSFSSVNN-QDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSNS 431
Query: 436 PNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLLG 495
PN +SG+GSYD M + NQSFRDQSMKSMQ QS+PDP+GLLG
Sbjct: 432 PNAVSGMGSYDPLIQQYQQQKNQSQFRLQ-MPSLNQSFRDQSMKSMQAAQSTPDPYGLLG 490
Query: 496 LLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCYN 555
LLSVIRM+D DL SLALG+DLTTLGLNLNSSENLHKTF SPWS+E AK DPEF V QCY
Sbjct: 491 LLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCYF 550
Query: 556 AKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVPN 615
+QPPALHQGYFSKFSVETLFYIFYSMP+D+AQLYAA+EL RGW+YHKE+RLWF R PN
Sbjct: 551 TEQPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELNNRGWWYHKEYRLWFKRAPN 610
Query: 616 MEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVLYYEMVEKRPL 658
ME LV+T+ YERG++HCFDPSSF+TV+KDN VL Y+M+E R L
Sbjct: 611 MELLVQTSTYERGTFHCFDPSSFETVRKDNVVLSYDMLENRHL 653
>Medtr2g096180.2 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057795-41063834 | 20130731
Length = 620
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/643 (62%), Positives = 451/643 (70%), Gaps = 46/643 (7%)
Query: 17 PDGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PT 74
PDG GR+F TSFS QSG ASP++ H+G IQGLHN+HGSFN+PNMP+TLTSRN TIN PT
Sbjct: 17 PDGAGRTF-TSFSSQSGAASPIYQHTGGIQGLHNMHGSFNIPNMPSTLTSRNSTINSMPT 75
Query: 75 GGVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVT 134
G VQQPT++LSSGRF SNNLP ALSQL
Sbjct: 76 GAVQQPTSSLSSGRFTSNNLPSALSQLSHG------------------------------ 105
Query: 135 GSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXX 194
+S N+ GLGVSPILGNAG RITSSMGNMV
Sbjct: 106 --------SSHGHSGVNSRGGLGVSPILGNAGPRITSSMGNMVGGGNIGRISSGGLSIPG 157
Query: 195 XXXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALN 254
QNR+MSGVLPQGSPQV+SMLGNSYPSAGG LSQSH+QA++
Sbjct: 158 LASRLNLNGNSGSGGLGVQGQNRMMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHMQAVH 217
Query: 255 NLNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQE 314
+LNSMGMLNDL+S DSSPFD+N+FPQLTSRP PI QQNQE
Sbjct: 218 HLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQGLS--PIVQQNQE 275
Query: 315 FRIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFPMGRSTGFSLGGXXXX 374
F I++EDFPALPGYKGG+ +F MDMHQKEQL+DN +SMMQSQHF MGRS GFSLGG
Sbjct: 276 FSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDNTMSMMQSQHFSMGRSAGFSLGGSYSS 335
Query: 375 XXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPN 434
QDL H+HGSD+FPSS+STYHSQT+GPPGIG+RP N
Sbjct: 336 HRSQQQHSPSVSNSGVSFSSMNN--QDL-HMHGSDVFPSSNSTYHSQTNGPPGIGLRPLN 392
Query: 435 SPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLL 494
SPNT+SG G YD MSA NQSFRD MKSMQT QS+PDPFGLL
Sbjct: 393 SPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDHGMKSMQTAQSAPDPFGLL 452
Query: 495 GLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCY 554
GLLSVIRMSDPDLTSLALG+DLTTLGLNLNSSENLHKTF SPWS+EPAK DPEF+VLQCY
Sbjct: 453 GLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFSVLQCY 512
Query: 555 NAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVP 614
AK PPALHQGYF+KF++ETLFYIFYSMP+DEAQLYAA+ELYKRGWFYHKEHR+W+I+VP
Sbjct: 513 YAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRMWYIKVP 572
Query: 615 NMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVLYYEMVEKRP 657
NMEPLVKT+ YERGSYHCFDPS+F+TV++DNFV YEMVEKRP
Sbjct: 573 NMEPLVKTSTYERGSYHCFDPSTFETVRRDNFVFQYEMVEKRP 615
>Medtr2g096180.3 | CCR4-NOT transcription complex subunit 2 | HC |
chr2:41057810-41063663 | 20130731
Length = 571
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/609 (62%), Positives = 423/609 (69%), Gaps = 45/609 (7%)
Query: 51 IHGSFNVPNMPNTLTSRNLTIN--PTGGVQQPTANLSSGRFASNNLPVALSQLXXXXXXX 108
+HGSFN+PNMP+TLTSRN TIN PTG VQQPT++LSSGRF SNNLP ALSQL
Sbjct: 1 MHGSFNIPNMPSTLTSRNSTINSMPTGAVQQPTSSLSSGRFTSNNLPSALSQLSHG---- 56
Query: 109 XXXXXXXXXISVVGNPGFNTSSNGVTGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSR 168
+S N+ GLGVSPILGNAG R
Sbjct: 57 ----------------------------------SSHGHSGVNSRGGLGVSPILGNAGPR 82
Query: 169 ITSSMGNMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSP 228
ITSSMGNMV QNR+MSGVLPQGSP
Sbjct: 83 ITSSMGNMVGGGNIGRISSGGLSIPGLASRLNLNGNSGSGGLGVQGQNRMMSGVLPQGSP 142
Query: 229 QVMSMLGNSYPSAGGQLSQSHVQALNNLNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXX 288
QV+SMLGNSYPSAGG LSQSH+QA+++LNSMGMLNDL+S DSSPFD+N+FPQLTSRP
Sbjct: 143 QVISMLGNSYPSAGGPLSQSHMQAVHHLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSA 202
Query: 289 XXXXXXXXXXXXXXXXXXPIGQQNQEFRIESEDFPALPGYKGGSADFAMDMHQKEQLHDN 348
PI QQNQEF I++EDFPALPGYKGG+ +F MDMHQKEQL+DN
Sbjct: 203 GGPQGQLGSLRKQGLS--PIVQQNQEFSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDN 260
Query: 349 PVSMMQSQHFPMGRSTGFSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGS 408
+SMMQSQHF MGRS GFSLGG QDL H+HGS
Sbjct: 261 TMSMMQSQHFSMGRSAGFSLGGSYSSHRSQQQHSPSVSNSGVSFSSMNN--QDL-HMHGS 317
Query: 409 DIFPSSHSTYHSQTSGPPGIGIRPPNSPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSA 468
D+FPSS+STYHSQT+GPPGIG+RP NSPNT+SG G YD MSA
Sbjct: 318 DVFPSSNSTYHSQTNGPPGIGLRPLNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSA 377
Query: 469 ANQSFRDQSMKSMQTVQSSPDPFGLLGLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSEN 528
NQSFRD MKSMQT QS+PDPFGLLGLLSVIRMSDPDLTSLALG+DLTTLGLNLNSSEN
Sbjct: 378 VNQSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSEN 437
Query: 529 LHKTFASPWSDEPAKSDPEFTVLQCYNAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQ 588
LHKTF SPWS+EPAK DPEF+VLQCY AK PPALHQGYF+KF++ETLFYIFYSMP+DEAQ
Sbjct: 438 LHKTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQ 497
Query: 589 LYAAHELYKRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVL 648
LYAA+ELYKRGWFYHKEHR+W+I+VPNMEPLVKT+ YERGSYHCFDPS+F+TV++DNFV
Sbjct: 498 LYAANELYKRGWFYHKEHRMWYIKVPNMEPLVKTSTYERGSYHCFDPSTFETVRRDNFVF 557
Query: 649 YYEMVEKRP 657
YEMVEKRP
Sbjct: 558 QYEMVEKRP 566
>Medtr4g061843.3 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912417-22920114 | 20130731
Length = 624
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/644 (60%), Positives = 435/644 (67%), Gaps = 44/644 (6%)
Query: 18 DGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PTG 75
D GRSFATSFS QSG ASP+FHH+G IQGLHNIHGSFNVPNMP TLT RN TIN P+G
Sbjct: 18 DSAGRSFATSFSSQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTPRNSTINNIPSG 77
Query: 76 GVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVTG 135
GVQQ NLSSGRFASNNLPVALSQL SVVGNPGFN+ +NGV G
Sbjct: 78 GVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGTSVVGNPGFNSGTNGVGG 137
Query: 136 SIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXXX 195
SIPG A+IGNRNAVPGLGVSPILGNAGSRITSS+ +
Sbjct: 138 SIPGF---PASIGNRNAVPGLGVSPILGNAGSRITSSV-GNMIGGGNIGRTGGGLSVPGL 193
Query: 196 XXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALNN 255
QNRLMS VLPQGSPQ +SM GNSYPSAGG LSQSH+ A+NN
Sbjct: 194 GSRLNFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSAGGALSQSHIHAVNN 253
Query: 256 LNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQEF 315
+N+M M ND++S DSSPFD+N+FPQL+SRP G Q Q
Sbjct: 254 MNTMRMFNDVNSNDSSPFDLNDFPQLSSRPSSAG-------------------GSQGQ-- 292
Query: 316 RIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFP-MGRSTGFSLGGXXXX 374
GG+AD+ MDMHQKEQLHDN SMMQSQHF MGRS GFSLGG
Sbjct: 293 -------------LGGNADYDMDMHQKEQLHDNASSMMQSQHFSQMGRSAGFSLGGTYSS 339
Query: 375 XXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPN 434
QDLLH HGSDIFPS HS Y SQTSGPPGIG+RP N
Sbjct: 340 HRTQPQQHNPSVSSGGVSFSSVNN-QDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSN 397
Query: 435 SPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLL 494
SPN +SG+GSYD M + NQSFRDQSMKSMQ QS+PDP+GLL
Sbjct: 398 SPNAVSGMGSYDPLIQQYQQQKNQSQFRLQ-MPSLNQSFRDQSMKSMQAAQSTPDPYGLL 456
Query: 495 GLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCY 554
GLLSVIRM+D DL SLALG+DLTTLGLNLNSSENLHKTF SPWS+E AK DPEF V QCY
Sbjct: 457 GLLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCY 516
Query: 555 NAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVP 614
+QPPALHQGYFSKFSVETLFYIFYSMP+D+AQLYAA+EL RGW+YHKE+RLWF R P
Sbjct: 517 FTEQPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELNNRGWWYHKEYRLWFKRAP 576
Query: 615 NMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVLYYEMVEKRPL 658
NME LV+T+ YERG++HCFDPSSF+TV+KDN VL Y+M+E R L
Sbjct: 577 NMELLVQTSTYERGTFHCFDPSSFETVRKDNVVLSYDMLENRHL 620
>Medtr4g061843.2 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912477-22919800 | 20130731
Length = 598
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/601 (61%), Positives = 416/601 (69%), Gaps = 9/601 (1%)
Query: 60 MPNTLTSRNLTIN--PTGGVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXX 117
MP TLT RN TIN P+GGVQQ NLSSGRFASNNLPVALSQL
Sbjct: 1 MPGTLTPRNSTINNIPSGGVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGG 60
Query: 118 ISVVGNPGFNTSSNGVTGSIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMV 177
SVVGNPGFN+ +NGV GSIPG A+IGNRNAVPGLGVSPILGNAGSRITSS+ +
Sbjct: 61 TSVVGNPGFNSGTNGVGGSIPGF---PASIGNRNAVPGLGVSPILGNAGSRITSSV-GNM 116
Query: 178 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNS 237
QNRLMS VLPQGSPQ +SM GNS
Sbjct: 117 IGGGNIGRTGGGLSVPGLGSRLNFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNS 176
Query: 238 YPSAGGQLSQSHVQALNNLNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXXXXXXXXXXX 297
YPSAGG LSQSH+ A+NN+N+M M ND++S DSSPFD+N+FPQL+SRP
Sbjct: 177 YPSAGGALSQSHIHAVNNMNTMRMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQGQLGS 236
Query: 298 XXXXXXXXXPIGQQNQEFRIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQH 357
PIGQQN EF I++EDFPALPG+KGG+AD+ MDMHQKEQLHDN SMMQSQH
Sbjct: 237 LRNQGLGISPIGQQNHEFSIQNEDFPALPGFKGGNADYDMDMHQKEQLHDNASSMMQSQH 296
Query: 358 FPMGRSTGFSLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHST 417
F MGRS GFSLGG QDLLH HGSDIFPS HS
Sbjct: 297 FSMGRSAGFSLGGTYSSHRTQPQQHNPSVSSGGVSFSSVNN-QDLLHQHGSDIFPS-HSA 354
Query: 418 YHSQTSGPPGIGIRPPNSPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQS 477
Y SQTSGPPGIG+RP NSPN +SG+GSYD M + NQSFRDQS
Sbjct: 355 YQSQTSGPPGIGLRPSNSPNAVSGMGSYDPLIQQYQQQKNQSQFRLQ-MPSLNQSFRDQS 413
Query: 478 MKSMQTVQSSPDPFGLLGLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPW 537
MKSMQ QS+PDP+GLLGLLSVIRM+D DL SLALG+DLTTLGLNLNSSENLHKTF SPW
Sbjct: 414 MKSMQAAQSTPDPYGLLGLLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPW 473
Query: 538 SDEPAKSDPEFTVLQCYNAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELYK 597
S+E AK DPEF V QCY +QPPALHQGYFSKFSVETLFYIFYSMP+D+AQLYAA+EL
Sbjct: 474 SEESAKGDPEFNVPQCYFTEQPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELNN 533
Query: 598 RGWFYHKEHRLWFIRVPNMEPLVKTNAYERGSYHCFDPSSFKTVQKDNFVLYYEMVEKRP 657
RGW+YHKE+RLWF R PNME LV+T+ YERG++HCFDPSSF+TV+KDN VL Y+M+E R
Sbjct: 534 RGWWYHKEYRLWFKRAPNMELLVQTSTYERGTFHCFDPSSFETVRKDNVVLSYDMLENRH 593
Query: 658 L 658
L
Sbjct: 594 L 594
>Medtr4g061843.4 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22912417-22920114 | 20130731
Length = 609
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/582 (62%), Positives = 401/582 (68%), Gaps = 10/582 (1%)
Query: 18 DGTGRSFATSFSGQSGVASPVFHHSGTIQGLHNIHGSFNVPNMPNTLTSRNLTIN--PTG 75
D GRSFATSFS QSG ASP+FHH+G IQGLHNIHGSFNVPNMP TLT RN TIN P+G
Sbjct: 18 DSAGRSFATSFSSQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTPRNSTINNIPSG 77
Query: 76 GVQQPTANLSSGRFASNNLPVALSQLXXXXXXXXXXXXXXXXISVVGNPGFNTSSNGVTG 135
GVQQ NLSSGRFASNNLPVALSQL SVVGNPGFN+ +NGV G
Sbjct: 78 GVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGTSVVGNPGFNSGTNGVGG 137
Query: 136 SIPGILPTSAAIGNRNAVPGLGVSPILGNAGSRITSSMGNMVXXXXXXXXXXXXXXXXXX 195
SIPG A+IGNRNAVPGLGVSPILGNAGSRITSS+ +
Sbjct: 138 SIPGF---PASIGNRNAVPGLGVSPILGNAGSRITSSV-GNMIGGGNIGRTGGGLSVPGL 193
Query: 196 XXXXXXXXXXXXXXXXXXXQNRLMSGVLPQGSPQVMSMLGNSYPSAGGQLSQSHVQALNN 255
QNRLMS VLPQGSPQ +SM GNSYPSAGG LSQSH+ A+NN
Sbjct: 194 GSRLNFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSAGGALSQSHIHAVNN 253
Query: 256 LNSMGMLNDLHSGDSSPFDINEFPQLTSRPXXXXXXXXXXXXXXXXXXXXXPIGQQNQEF 315
+N+M M ND++S DSSPFD+N+FPQL+SRP PIGQQN EF
Sbjct: 254 MNTMRMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQGQLGSLRNQGLGISPIGQQNHEF 313
Query: 316 RIESEDFPALPGYKGGSADFAMDMHQKEQLHDNPVSMMQSQHFP-MGRSTGFSLGGXXXX 374
I++EDFPALPG+KGG+AD+ MDMHQKEQLHDN SMMQSQHF MGRS GFSLGG
Sbjct: 314 SIQNEDFPALPGFKGGNADYDMDMHQKEQLHDNASSMMQSQHFSQMGRSAGFSLGGTYSS 373
Query: 375 XXXXXXXXXXXXXXXXXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPN 434
QDLLH HGSDIFPS HS Y SQTSGPPGIG+RP N
Sbjct: 374 HRTQPQQHNPSVSSGGVSFSSVNN-QDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSN 431
Query: 435 SPNTISGVGSYDXXXXXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLL 494
SPN +SG+GSYD M + NQSFRDQSMKSMQ QS+PDP+GLL
Sbjct: 432 SPNAVSGMGSYDPLIQQYQQQKNQSQFRLQ-MPSLNQSFRDQSMKSMQAAQSTPDPYGLL 490
Query: 495 GLLSVIRMSDPDLTSLALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCY 554
GLLSVIRM+D DL SLALG+DLTTLGLNLNSSENLHKTF SPWS+E AK DPEF V QCY
Sbjct: 491 GLLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCY 550
Query: 555 NAKQPPALHQGYFSKFSVETLFYIFYSMPRDEAQLYAAHELY 596
+QPPALHQGYFSKFSVETLFYIFYSMP+D+AQLYAA+ELY
Sbjct: 551 FTEQPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELY 592
>Medtr4g061960.1 | CCR4-NOT transcription complex subunit 2 | HC |
chr4:22973895-22971677 | 20130731
Length = 333
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 247/329 (75%), Gaps = 3/329 (0%)
Query: 330 GGSADFAMDMHQKEQLHDNPVSMMQSQHFPMGRSTGFSLGGXXXXXXXXXXXXXXXXXXX 389
GG+AD+ MDMHQKEQLHDN SMMQSQHF MGRS GFSLGG
Sbjct: 4 GGNADYDMDMHQKEQLHDNASSMMQSQHFSMGRSAGFSLGGTYSSHRTQPQQHNPSVSSG 63
Query: 390 XXXXXXXXXXQDLLHLHGSDIFPSSHSTYHSQTSGPPGIGIRPPNSPNTISGVGSYDXXX 449
QDLLH HGSDIFPS HS Y SQTSGPPGIG+RP NSPN +SG+GSYD
Sbjct: 64 GVSFSSVNN-QDLLHQHGSDIFPS-HSAYQSQTSGPPGIGLRPSNSPNAVSGMGSYDPLI 121
Query: 450 XXXXXXXXXXXXXXXXMSAANQSFRDQSMKSMQTVQSSPDPFGLLGLLSVIRMSDPDLTS 509
M + NQSFRDQSMKSMQ QS+PDP+GLLGLLSVIRM+D DL S
Sbjct: 122 QQYQQQKNQSQFRLQ-MPSLNQSFRDQSMKSMQAAQSTPDPYGLLGLLSVIRMNDLDLAS 180
Query: 510 LALGVDLTTLGLNLNSSENLHKTFASPWSDEPAKSDPEFTVLQCYNAKQPPALHQGYFSK 569
LALG+DLTTLGLNLNSSENLHKTF SPWS+E AK DPEF V QCY +QPPALHQGYFSK
Sbjct: 181 LALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCYFTEQPPALHQGYFSK 240
Query: 570 FSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGS 629
FSVETLFYIFYSMP+D+AQLYAA+EL RGW+YHKE+RLWF R PNME LV+T+ YERG+
Sbjct: 241 FSVETLFYIFYSMPKDKAQLYAANELNNRGWWYHKEYRLWFKRAPNMELLVQTSTYERGT 300
Query: 630 YHCFDPSSFKTVQKDNFVLYYEMVEKRPL 658
+HCFDPSSF+TV+KDN VL Y+M+E R L
Sbjct: 301 FHCFDPSSFETVRKDNVVLSYDMLENRHL 329
>Medtr7g085350.1 | transcription regulator NOT2/NOT3/NOT5 family
protein | HC | chr7:33041291-33054371 | 20130731
Length = 901
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 570 FSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGS 629
F +TLF+ FY Q AA EL K+ W YH+++ WF R + EP V T+ YE+G+
Sbjct: 807 FGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQR--HEEPKVATDDYEQGT 864
Query: 630 YHCFD 634
Y FD
Sbjct: 865 YVYFD 869
>Medtr7g085350.2 | transcription regulator NOT2/NOT3/NOT5 family
protein | HC | chr7:33041286-33054371 | 20130731
Length = 876
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 570 FSVETLFYIFYSMPRDEAQLYAAHELYKRGWFYHKEHRLWFIRVPNMEPLVKTNAYERGS 629
F +TLF+ FY Q AA EL K+ W YH+++ WF R + EP V T+ YE+G+
Sbjct: 782 FGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQR--HEEPKVATDDYEQGT 839
Query: 630 YHCFD 634
Y FD
Sbjct: 840 YVYFD 844