Miyakogusa Predicted Gene
- Lj0g3v0249849.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0249849.1 Non Characterized Hit- tr|I1JVG7|I1JVG7_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,82.95,0,WD_REPEATS_1,WD40 repeat, conserved site; TolB,
C-terminal domain,NULL; WD_REPEATS_2,WD40 repeat; WD,gene.g19462.t1.1
(178 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g074070.1 | transducin/WD40 repeat protein | HC | chr3:334... 301 2e-82
Medtr3g074070.2 | transducin/WD40 repeat protein | HC | chr3:334... 301 2e-82
Medtr3g074070.4 | transducin/WD40 repeat protein | HC | chr3:334... 301 3e-82
Medtr3g074070.3 | transducin/WD40 repeat protein | HC | chr3:334... 301 3e-82
Medtr3g074070.5 | transducin/WD40 repeat protein | HC | chr3:334... 300 3e-82
Medtr3g074070.6 | transducin/WD40 repeat protein | HC | chr3:334... 300 3e-82
Medtr2g028050.1 | transducin/WD40 repeat protein | HC | chr2:103... 244 3e-65
Medtr3g010010.1 | transducin/WD40 repeat protein | HC | chr3:226... 231 2e-61
Medtr3g010010.2 | transducin/WD40 repeat protein | HC | chr3:226... 231 2e-61
Medtr7g022190.1 | transducin/WD40 repeat protein | HC | chr7:710... 214 4e-56
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 66 2e-11
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 65 4e-11
Medtr4g088640.1 | WD40 domain protein | LC | chr4:35254776-35252... 62 2e-10
Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protei... 60 9e-10
Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protei... 60 9e-10
Medtr4g088625.1 | transcriptional corepressor leunig-like protei... 54 7e-08
Medtr3g045130.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | H... 54 9e-08
Medtr3g045130.2 | U4/U6 small nuclear ribonucleoprotein PRP4 | H... 54 9e-08
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 53 1e-07
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 53 1e-07
Medtr5g022690.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | H... 53 1e-07
Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like... 52 3e-07
Medtr4g088660.1 | WD domain, G-beta repeat protein | LC | chr4:3... 49 2e-06
Medtr2g019400.1 | PP1/PP2A phosphatase pleiotropic regulator PRL... 49 2e-06
Medtr1g044720.1 | Pre-mRNA-processing factor | HC | chr1:1688845... 48 4e-06
Medtr2g436510.1 | PP1/PP2A phosphatase pleiotropic regulator PRL... 48 4e-06
Medtr1g081830.3 | transducin/WD40 repeat protein | HC | chr1:364... 48 5e-06
Medtr1g081830.4 | transducin/WD40 repeat protein | HC | chr1:364... 48 5e-06
Medtr1g081830.2 | transducin/WD40 repeat protein | HC | chr1:364... 48 5e-06
Medtr1g081830.1 | transducin/WD40 repeat protein | HC | chr1:364... 48 5e-06
Medtr1g054300.1 | WD-40 repeat protein/notchless protein, putati... 47 8e-06
>Medtr3g074070.1 | transducin/WD40 repeat protein | HC |
chr3:33432745-33438182 | 20130731
Length = 458
Score = 301 bits (771), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/176 (81%), Positives = 158/176 (89%), Gaps = 6/176 (3%)
Query: 8 MGCGK------NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPN 61
+GC K N S SPDGK LAVLGDSTE LIAD NTGKVTG+LKGHLDYSF+SAWHPN
Sbjct: 282 LGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPN 341
Query: 62 GQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFD 121
GQILATGNQDTTCRLWDIRNLS+S+AVLKGRMGAIR+L+FTSDG+FLAMAEPADF+H+FD
Sbjct: 342 GQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFD 401
Query: 122 SHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTM 177
SHSGY Q QEIDIFGEIAG+SFSPDTEALFVGVADRTYGSLLEFTR + Y+D+M
Sbjct: 402 SHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSM 457
>Medtr3g074070.2 | transducin/WD40 repeat protein | HC |
chr3:33432724-33438185 | 20130731
Length = 457
Score = 301 bits (771), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/176 (81%), Positives = 158/176 (89%), Gaps = 6/176 (3%)
Query: 8 MGCGK------NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPN 61
+GC K N S SPDGK LAVLGDSTE LIAD NTGKVTG+LKGHLDYSF+SAWHPN
Sbjct: 281 LGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPN 340
Query: 62 GQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFD 121
GQILATGNQDTTCRLWDIRNLS+S+AVLKGRMGAIR+L+FTSDG+FLAMAEPADF+H+FD
Sbjct: 341 GQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFD 400
Query: 122 SHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTM 177
SHSGY Q QEIDIFGEIAG+SFSPDTEALFVGVADRTYGSLLEFTR + Y+D+M
Sbjct: 401 SHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSM 456
>Medtr3g074070.4 | transducin/WD40 repeat protein | HC |
chr3:33432729-33438185 | 20130731
Length = 485
Score = 301 bits (770), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/176 (81%), Positives = 158/176 (89%), Gaps = 6/176 (3%)
Query: 8 MGCGK------NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPN 61
+GC K N S SPDGK LAVLGDSTE LIAD NTGKVTG+LKGHLDYSF+SAWHPN
Sbjct: 309 LGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPN 368
Query: 62 GQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFD 121
GQILATGNQDTTCRLWDIRNLS+S+AVLKGRMGAIR+L+FTSDG+FLAMAEPADF+H+FD
Sbjct: 369 GQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFD 428
Query: 122 SHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTM 177
SHSGY Q QEIDIFGEIAG+SFSPDTEALFVGVADRTYGSLLEFTR + Y+D+M
Sbjct: 429 SHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSM 484
>Medtr3g074070.3 | transducin/WD40 repeat protein | HC |
chr3:33432739-33438185 | 20130731
Length = 343
Score = 301 bits (770), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 158/177 (89%), Gaps = 6/177 (3%)
Query: 8 MGCGK------NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPN 61
+GC K N S SPDGK LAVLGDSTE LIAD NTGKVTG+LKGHLDYSF+SAWHPN
Sbjct: 167 LGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPN 226
Query: 62 GQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFD 121
GQILATGNQDTTCRLWDIRNLS+S+AVLKGRMGAIR+L+FTSDG+FLAMAEPADF+H+FD
Sbjct: 227 GQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFD 286
Query: 122 SHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
SHSGY Q QEIDIFGEIAG+SFSPDTEALFVGVADRTYGSLLEFTR + Y+D+M
Sbjct: 287 SHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 343
>Medtr3g074070.5 | transducin/WD40 repeat protein | HC |
chr3:33434654-33438185 | 20130731
Length = 298
Score = 300 bits (769), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 158/177 (89%), Gaps = 6/177 (3%)
Query: 8 MGCGK------NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPN 61
+GC K N S SPDGK LAVLGDSTE LIAD NTGKVTG+LKGHLDYSF+SAWHPN
Sbjct: 122 LGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPN 181
Query: 62 GQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFD 121
GQILATGNQDTTCRLWDIRNLS+S+AVLKGRMGAIR+L+FTSDG+FLAMAEPADF+H+FD
Sbjct: 182 GQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFD 241
Query: 122 SHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
SHSGY Q QEIDIFGEIAG+SFSPDTEALFVGVADRTYGSLLEFTR + Y+D+M
Sbjct: 242 SHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 298
>Medtr3g074070.6 | transducin/WD40 repeat protein | HC |
chr3:33434654-33438185 | 20130731
Length = 298
Score = 300 bits (769), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/177 (81%), Positives = 158/177 (89%), Gaps = 6/177 (3%)
Query: 8 MGCGK------NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPN 61
+GC K N S SPDGK LAVLGDSTE LIAD NTGKVTG+LKGHLDYSF+SAWHPN
Sbjct: 122 LGCFKYDWSVNNASVSPDGKLLAVLGDSTEGLIADANTGKVTGNLKGHLDYSFSSAWHPN 181
Query: 62 GQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFD 121
GQILATGNQDTTCRLWDIRNLS+S+AVLKGRMGAIR+L+FTSDG+FLAMAEPADF+H+FD
Sbjct: 182 GQILATGNQDTTCRLWDIRNLSESIAVLKGRMGAIRSLKFTSDGKFLAMAEPADFVHIFD 241
Query: 122 SHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
SHSGY Q QEIDIFGEIAG+SFSPDTEALFVGVADRTYGSLLEFTR + Y+D+M
Sbjct: 242 SHSGYVQSQEIDIFGEIAGLSFSPDTEALFVGVADRTYGSLLEFTRKHYYQYLDSMI 298
>Medtr2g028050.1 | transducin/WD40 repeat protein | HC |
chr2:10318086-10324758 | 20130731
Length = 447
Score = 244 bits (623), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 108/163 (66%), Positives = 138/163 (84%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SP+GK L ++GD+ + L+ D TGK L GHLDYSFASAWHP+G I ATGNQD TC
Sbjct: 285 SLSPNGKQLVIVGDNPDGLLVDAQTGKTIAPLCGHLDYSFASAWHPDGFIFATGNQDKTC 344
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WD+RNLS+S+AVLKG +GAIR++RFTSDGR++AMAEPADF+HV+D+ G+E+ QEID
Sbjct: 345 RIWDVRNLSKSVAVLKGNLGAIRSIRFTSDGRYMAMAEPADFVHVYDAKQGFEKEQEIDF 404
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTM 177
FGE++GVSFSPDTE+LF+GV DRTYGSLL+F R+RN+ Y+D +
Sbjct: 405 FGEVSGVSFSPDTESLFIGVWDRTYGSLLQFNRHRNYTYLDYL 447
>Medtr3g010010.1 | transducin/WD40 repeat protein | HC |
chr3:2267177-2260075 | 20130731
Length = 489
Score = 231 bits (590), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 102/163 (62%), Positives = 134/163 (82%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPDGK L ++GD+ E ++ D GK L GHLD+SFAS+W+P+G ATGNQD TC
Sbjct: 326 SLSPDGKLLLIVGDNPESMLVDSQNGKTIAPLSGHLDFSFASSWNPDGVTFATGNQDKTC 385
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WD+RNLS+S+AVLKG +GAIR++R +SDG+++A+AEPADF+HV+D SGYE+ QEID
Sbjct: 386 RIWDMRNLSKSVAVLKGNLGAIRSIRHSSDGKYMAIAEPADFVHVYDVKSGYEKEQEIDF 445
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTM 177
FGEI+G+SFSPDTE+LF+GV DRTYGSLLE+ R N+ Y+D+M
Sbjct: 446 FGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRHNYSYLDSM 488
>Medtr3g010010.2 | transducin/WD40 repeat protein | HC |
chr3:2266588-2260075 | 20130731
Length = 447
Score = 231 bits (590), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 102/163 (62%), Positives = 134/163 (82%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPDGK L ++GD+ E ++ D GK L GHLD+SFAS+W+P+G ATGNQD TC
Sbjct: 284 SLSPDGKLLLIVGDNPESMLVDSQNGKTIAPLSGHLDFSFASSWNPDGVTFATGNQDKTC 343
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WD+RNLS+S+AVLKG +GAIR++R +SDG+++A+AEPADF+HV+D SGYE+ QEID
Sbjct: 344 RIWDMRNLSKSVAVLKGNLGAIRSIRHSSDGKYMAIAEPADFVHVYDVKSGYEKEQEIDF 403
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTM 177
FGEI+G+SFSPDTE+LF+GV DRTYGSLLE+ R N+ Y+D+M
Sbjct: 404 FGEISGISFSPDTESLFIGVWDRTYGSLLEYGRRHNYSYLDSM 446
>Medtr7g022190.1 | transducin/WD40 repeat protein | HC |
chr7:7106011-7099839 | 20130731
Length = 440
Score = 214 bits (544), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 124/164 (75%)
Query: 15 SASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTC 74
S SPD K + V+GD+ E L+ D GK +L GH DYSFASAWHPNG ATGNQD TC
Sbjct: 277 SISPDRKLMTVVGDNLEGLLVDPQNGKTVATLSGHQDYSFASAWHPNGLAFATGNQDKTC 336
Query: 75 RLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDI 134
R+WD RN+S +A+LK +GA R++RF+SDG+F+ +AEPADF+HV+ + + YE+ QEID
Sbjct: 337 RVWDARNVSSPIAILKNNLGASRSIRFSSDGQFMVVAEPADFVHVYSTTANYEKSQEIDF 396
Query: 135 FGEIAGVSFSPDTEALFVGVADRTYGSLLEFTRNRNHHYVDTMF 178
FGEI+GVS SPD E +++G+ DRTY SLL++ R ++HY+D+ F
Sbjct: 397 FGEISGVSVSPDDECMYIGIWDRTYASLLQYNRRHSYHYLDSYF 440
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 13 NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
+++ S D + L D + DV TG + +L GH +Y F ++P ++ +G+ D
Sbjct: 83 DLAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFNPQSNVIVSGSFDE 142
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
T R+WD+++ + + VL + A+ F DG + + ++D+ +G+ C +
Sbjct: 143 TVRVWDVKS-GKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIWDASTGH--CIKT 199
Query: 133 DIFGE---IAGVSFSPDTEALFVGVAD 156
I E ++ V FSP+ + + VG D
Sbjct: 200 LIDDENPPVSYVKFSPNAKFILVGTLD 226
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 64/153 (41%), Gaps = 34/153 (22%)
Query: 28 DSTECLIA-----------DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRL 76
DS+E L+A D+ K+ +L GH + +HP G+ A+G+ DT ++
Sbjct: 68 DSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCTSVDFHPFGEFFASGSLDTNLKI 127
Query: 77 WDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMA-----------EPADFIHVFDSHSG 125
WDIR + KG + A+RFT DGR++ +H F SH G
Sbjct: 128 WDIRK-KGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEG 186
Query: 126 YEQCQEIDIFGEIAGVSFSPDTEALFVGVADRT 158
QC + F P L G ADRT
Sbjct: 187 QIQC-----------IDFHPSEFLLATGSADRT 208
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 2 IWDERIMGC---------GKN-ISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLD 51
IWD R GC G N I +PDG+ + G+ + D+ GK+ K H
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEG 186
Query: 52 YSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGA----IRALRFTSDGRF 107
+HP+ +LATG+ D T + WD+ L G G +R+L F+ DGR
Sbjct: 187 QIQCIDFHPSEFLLATGSADRTVKFWDLETFE-----LIGSAGPETTGVRSLTFSPDGRT 241
Query: 108 L 108
L
Sbjct: 242 L 242
>Medtr4g088640.1 | WD40 domain protein | LC | chr4:35254776-35252626
| 20130731
Length = 383
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)
Query: 17 SPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRL 76
S DGK +A G + I + TG +L+ HLD F + P + AT + D T +L
Sbjct: 116 SSDGKIVASGGIGKKPFICYLETGLSVTALESHLDTIFEVRFQPGSTVFATSSADKTVKL 175
Query: 77 WDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIFG 136
WD + +S + G G +R+L F G L ++ D I V+D H ++ F
Sbjct: 176 WDANSPERSFCNVVGHNGTVRSLDFHPLGGVLCTSDTCDVIKVWDLHKNV----LVNEFK 231
Query: 137 EIAGVSFSPDTEALFVGVADRTYGSLLE 164
+ V F P + L + VA+R ++++
Sbjct: 232 AGSLVRFQPGSGKL-LAVANRNVITIID 258
>Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190941-3179834 | 20130731
Length = 1111
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 15 SASPDGKSLAVLGDSTECLIA--DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
S + D + VL ST +I D+ K+ ++ GH + +HP G+ A+G+ DT
Sbjct: 63 SVTFDSGEVLVLAGSTSGVIRLWDLEESKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDT 122
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
++WD R + KG I ++FT DGR++ + + V+D +G + +
Sbjct: 123 NLKIWDNRK-KGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAG-KLLHDF 180
Query: 133 DIF-GEIAGVSFSPDTEALFVGVADRT 158
+ G I + F P L G ADRT
Sbjct: 181 NFHDGHITSLDFHPLEFLLATGSADRT 207
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 2 IWDERIMGC-------GKNISA---SPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLD 51
IWD R GC + IS +PDG+ + G + D+ GK+ H
Sbjct: 126 IWDNRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHDG 185
Query: 52 YSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFL 108
+ + +HP +LATG+ D T + WD+ + + + + +R++ F DGR L
Sbjct: 186 HITSLDFHPLEFLLATGSADRTVKFWDLESF-ELIGSARREATGVRSMAFHPDGRTL 241
>Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190921-3179833 | 20130731
Length = 1030
Score = 60.5 bits (145), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 15 SASPDGKSLAVLGDSTECLIA--DVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
S + D + VL ST +I D+ K+ ++ GH + +HP G+ A+G+ DT
Sbjct: 63 SVTFDSGEVLVLAGSTSGVIRLWDLEESKMVRTVAGHRSNCTSVEFHPFGEFFASGSMDT 122
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
++WD R + KG I ++FT DGR++ + + V+D +G + +
Sbjct: 123 NLKIWDNRK-KGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAG-KLLHDF 180
Query: 133 DIF-GEIAGVSFSPDTEALFVGVADRT 158
+ G I + F P L G ADRT
Sbjct: 181 NFHDGHITSLDFHPLEFLLATGSADRT 207
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 2 IWDERIMGC-------GKNISA---SPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLD 51
IWD R GC + IS +PDG+ + G + D+ GK+ H
Sbjct: 126 IWDNRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHDG 185
Query: 52 YSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFL 108
+ + +HP +LATG+ D T + WD+ + + + + +R++ F DGR L
Sbjct: 186 HITSLDFHPLEFLLATGSADRTVKFWDLESF-ELIGSARREATGVRSMAFHPDGRTL 241
>Medtr4g088625.1 | transcriptional corepressor leunig-like protein |
LC | chr4:35241998-35240374 | 20130731
Length = 299
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 17 SPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRL 76
S DG LA G S + I ++TG + K H + P I AT + D T +L
Sbjct: 32 SSDGNILASCGKSGKPFICYIDTGDCVTTSKSHSSTILEVRFQPGSTIFATSSADKTVKL 91
Query: 77 WDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIFG 136
WD + ++ +R+L F G L ++ ++ I V+D + Q + I
Sbjct: 92 WDAKKPGTLLSGFDEHEAQVRSLDFHPLGGTLCSSDTSNVIKVWDLN------QRVRINH 145
Query: 137 EIAG--VSFSPDTEALFVGVADRTYGSLLEF 165
IAG V F P + L + VA++ ++LEF
Sbjct: 146 CIAGSLVRFQPGSGKL-LAVANQNVIAILEF 175
>Medtr3g045130.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | HC |
chr3:14589773-14591633 | 20130731
Length = 521
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 19 DGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWD 78
DG A G + D+ TG+ +L+GH+ ++ PNG LATG +D TCR+WD
Sbjct: 409 DGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNTCRIWD 468
Query: 79 IRNLSQSMAVLKGRMGAIRALRF-TSDGRFLAMA 111
+R +S+ + I ++F +G FL A
Sbjct: 469 LRK-KKSLYTIPAHSNLISQVKFEPQEGYFLVTA 501
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 38 NTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIR 97
+ G + G+ KGHL+ A+HP+G+ L T + D T RLWD+ + + + +G ++
Sbjct: 344 DQGALLGTFKGHLERLARIAFHPSGKYLGTASYDKTWRLWDV-ETEEELLLQEGHSRSVY 402
Query: 98 ALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADR 157
L F DG A V+D +G I G+SFSP+ L G D
Sbjct: 403 GLDFHHDGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDN 462
Query: 158 T 158
T
Sbjct: 463 T 463
>Medtr3g045130.2 | U4/U6 small nuclear ribonucleoprotein PRP4 | HC |
chr3:14589773-14591633 | 20130731
Length = 521
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 19 DGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWD 78
DG A G + D+ TG+ +L+GH+ ++ PNG LATG +D TCR+WD
Sbjct: 409 DGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNTCRIWD 468
Query: 79 IRNLSQSMAVLKGRMGAIRALRF-TSDGRFLAMA 111
+R +S+ + I ++F +G FL A
Sbjct: 469 LRK-KKSLYTIPAHSNLISQVKFEPQEGYFLVTA 501
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 38 NTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIR 97
+ G + G+ KGHL+ A+HP+G+ L T + D T RLWD+ + + + +G ++
Sbjct: 344 DQGALLGTFKGHLERLARIAFHPSGKYLGTASYDKTWRLWDV-ETEEELLLQEGHSRSVY 402
Query: 98 ALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADR 157
L F DG A V+D +G I G+SFSP+ L G D
Sbjct: 403 GLDFHHDGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDN 462
Query: 158 T 158
T
Sbjct: 463 T 463
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 46 LKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDG 105
+ GHL WH N +ATG+ D T RLWD+++ + + V G G I +L + DG
Sbjct: 499 MAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQS-GECVRVFVGHRGMILSLSMSPDG 557
Query: 106 RFLAMAEPADFIHVFDSHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADRT 158
R++A + I ++D SG + + ++FS + L G AD T
Sbjct: 558 RYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWSLAFSSEGSILASGSADCT 610
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 13 NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
++S SPDG+ +A + ++ D+++G+ L GH ++ A+ G ILA+G+ D
Sbjct: 550 SLSMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWSLAFSSEGSILASGSADC 609
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALR 100
T +LWD+ N S ++ + + G LR
Sbjct: 610 TVKLWDV-NTSTKVSRTEEKNGNANRLR 636
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 13 NISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDT 72
+I+ S D + D I D NTG +L+GH F ++P + +G+ D
Sbjct: 74 DIAWSSDSHYICSASDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNPQSNYIVSGSFDE 133
Query: 73 TCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEI 132
T R+W+++ +S+ V+K + ++ F DG + ++D++SG I
Sbjct: 134 TVRVWEVKT-GKSVHVIKAHAMPVTSVDFNRDGSLIVSGSHDGSCKIWDTNSGALLKTLI 192
Query: 133 DIFGEIAGVS---FSPDTEALFVGVADRT 158
D ++ VS FSP+ + + V + T
Sbjct: 193 D--DKVPAVSFAKFSPNGKFILVATLNDT 219
>Medtr5g022690.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | HC |
chr5:8972619-8969829 | 20130731
Length = 488
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 14 ISASPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTT 73
I+ P GK L D + DV TG+ +GH ++ A+H +G + A+ +D
Sbjct: 285 IAFHPSGKYLGTASDDKTWRLWDVETGEELLLQEGHSREVYSLAFHHDGSLAASCGKDAL 344
Query: 74 CRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFD 121
R+WD+R +S+ L+G + IR + F+ +G LA + ++D
Sbjct: 345 ARVWDLRT-KRSLLALEGHVKPIRGISFSPNGYHLATGGEDNTCRIWD 391
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 38 NTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIR 97
+ G + + KGH D A+HP+G+ L T + D T RLWD+ + + + +G +
Sbjct: 267 DQGSLLRTFKGHSDRLARIAFHPSGKYLGTASDDKTWRLWDVET-GEELLLQEGHSREVY 325
Query: 98 ALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIFGEIAGVSFSPDTEALFVGVADR 157
+L F DG A V+D + I G+SFSP+ L G D
Sbjct: 326 SLAFHHDGSLAASCGKDALARVWDLRTKRSLLALEGHVKPIRGISFSPNGYHLATGGEDN 385
Query: 158 T 158
T
Sbjct: 386 T 386
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 19 DGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWD 78
DG A G + D+ T + +L+GH+ ++ PNG LATG +D TCR+WD
Sbjct: 332 DGSLAASCGKDALARVWDLRTKRSLLALEGHVKPIRGISFSPNGYHLATGGEDNTCRIWD 391
Query: 79 IRNLSQSMAVLKGRMGAIRALRF-TSDGRFLAMAEP---------ADFIHVFDSHSGYEQ 128
+R ++S+ + I ++F +G FL DF HV + SG+E
Sbjct: 392 LRK-NKSLYTIAAHSKLISQVKFEPQEGYFLVTTSSDMTAKVWSGRDFKHV-KTLSGHEA 449
Query: 129 -CQEIDIFGE 137
+D+ G+
Sbjct: 450 IVSSVDVLGD 459
>Medtr7g086360.1 | U5 small nuclear ribonucleoprotein 40 kDa-like
protein | HC | chr7:33509053-33512350 | 20130731
Length = 345
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 46 LKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDG 105
L GH + ++P G ++A+G+ D LW++ ++ VLKG A+ L +TSDG
Sbjct: 51 LTGHQSAVYTMKFNPTGSVVASGSHDKEIFLWNVHGDCKNFMVLKGHKNAVLDLHWTSDG 110
Query: 106 RFLAMAEPADFIHVFDSHSGYE 127
+ A P + ++D+ +G +
Sbjct: 111 TQIISASPDKTLRLWDTETGKQ 132
>Medtr4g088660.1 | WD domain, G-beta repeat protein | LC |
chr4:35273222-35269918 | 20130731
Length = 481
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Query: 17 SPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRL 76
S DGK +A G + I + TG + + HLD + I AT + D T +L
Sbjct: 214 SSDGKIVASGGLGKQPFICYMETGNSFTTSETHLDAILEVRFRSGSPIFATSSADRTVKL 273
Query: 77 WDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQCQEIDIFG 136
W + + L G G + +L F L ++ D I V+D EQC I+ F
Sbjct: 274 WHAKRTRVKLLELAGHNGIVSSLDFHPLREILCSSDTCDAIKVWD----LEQCVTINNFT 329
Query: 137 EIA-GVSFSPDTEALFVGVADR 157
E V F P + F+ VA++
Sbjct: 330 EGGRQVRFQPGS-GTFLAVANQ 350
>Medtr2g019400.1 | PP1/PP2A phosphatase pleiotropic regulator PRL1 |
HC | chr2:6339677-6336997 | 20130731
Length = 274
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 27 GDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSM 86
GD + D+ +V S GHL + A HP IL TG ++ CR+WDIR+ +
Sbjct: 52 GDDKQVKCWDLKQNEVISSYHGHLSSVYCLALHPTFDILVTGGHNSVCRVWDIRS-EMPV 110
Query: 87 AVLKGRMGAIRAL 99
L G AI +L
Sbjct: 111 QTLSGHDNAISSL 123
>Medtr1g044720.1 | Pre-mRNA-processing factor | HC |
chr1:16888450-16897958 | 20130731
Length = 519
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 55 ASAWHPNGQILATGNQDTTCRLWDIRNLSQSMAVLKGRMGAIRALRFTSDGRFLAMA 111
++A+HP+G IL TG D+ ++WD+++ + ++A G +G + A+ F+ +G +LA A
Sbjct: 356 SAAFHPDGLILGTGTTDSLVKIWDVKSQA-NVAKFDGHVGHVTAISFSENGYYLATA 411
>Medtr2g436510.1 | PP1/PP2A phosphatase pleiotropic regulator PRL1 |
HC | chr2:14198159-14190457 | 20130731
Length = 480
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 27 GDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRNLSQSM 86
GD + D+ KV S GHL + A HP IL TG +D+ CR+WDIR+ Q
Sbjct: 231 GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLAIHPTIDILLTGGRDSVCRVWDIRSKMQIH 290
Query: 87 AV 88
A+
Sbjct: 291 AL 292
>Medtr1g081830.3 | transducin/WD40 repeat protein | HC |
chr1:36423916-36438661 | 20130731
Length = 763
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 22 SLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRN 81
SL +G S + + + KGH + +A A + G +L +G + R+WD R+
Sbjct: 189 SLRTIGSSNSISMQAQTEVYIPVTAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRS 248
Query: 82 LSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQC 129
S++M LKG IRAL S GRF + ++D G ++C
Sbjct: 249 GSKTMK-LKGHTDNIRALLLDSTGRFCLSGSSDSMLRLWD--LGQQRC 293
>Medtr1g081830.4 | transducin/WD40 repeat protein | HC |
chr1:36423916-36438661 | 20130731
Length = 763
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 22 SLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRN 81
SL +G S + + + KGH + +A A + G +L +G + R+WD R+
Sbjct: 189 SLRTIGSSNSISMQAQTEVYIPVTAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRS 248
Query: 82 LSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQC 129
S++M LKG IRAL S GRF + ++D G ++C
Sbjct: 249 GSKTMK-LKGHTDNIRALLLDSTGRFCLSGSSDSMLRLWD--LGQQRC 293
>Medtr1g081830.2 | transducin/WD40 repeat protein | HC |
chr1:36423916-36438661 | 20130731
Length = 763
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 22 SLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRN 81
SL +G S + + + KGH + +A A + G +L +G + R+WD R+
Sbjct: 189 SLRTIGSSNSISMQAQTEVYIPVTAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRS 248
Query: 82 LSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQC 129
S++M LKG IRAL S GRF + ++D G ++C
Sbjct: 249 GSKTMK-LKGHTDNIRALLLDSTGRFCLSGSSDSMLRLWD--LGQQRC 293
>Medtr1g081830.1 | transducin/WD40 repeat protein | HC |
chr1:36426820-36438661 | 20130731
Length = 735
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 22 SLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRLWDIRN 81
SL +G S + + + KGH + +A A + G +L +G + R+WD R+
Sbjct: 161 SLRTIGSSNSISMQAQTEVYIPVTAKGHKESVYALAMNEGGTLLVSGGTEKVVRVWDPRS 220
Query: 82 LSQSMAVLKGRMGAIRALRFTSDGRFLAMAEPADFIHVFDSHSGYEQC 129
S++M LKG IRAL S GRF + ++D G ++C
Sbjct: 221 GSKTMK-LKGHTDNIRALLLDSTGRFCLSGSSDSMLRLWD--LGQQRC 265
>Medtr1g054300.1 | WD-40 repeat protein/notchless protein, putative
| HC | chr1:23359694-23368343 | 20130731
Length = 483
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 17 SPDGKSLAVLGDSTECLIADVNTGKVTGSLKGHLDYSFASAWHPNGQILATGNQDTTCRL 76
SPDG+ +A I + TGK + +GH+ + +W + ++L +G++D+T ++
Sbjct: 379 SPDGQWIASASFDKSVKIWNGTTGKFVTAFRGHVGPVYQISWSADSRLLLSGSKDSTLKV 438
Query: 77 WDI--RNLSQSMAVLKGRMGAIRALRFTSDGRFLA 109
WDI R L Q L G + ++ ++ DG +A
Sbjct: 439 WDIRTRKLKQD---LPGHADEVFSVDWSPDGEKVA 470