Miyakogusa Predicted Gene

Lj0g3v0249499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0249499.1 Non Characterized Hit- tr|B9RRG2|B9RRG2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,42.71,0.0000000008,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_63287_length_1309_cov_65.424751.path2.1
         (305 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g096670.2 | F-box plant protein, putative | HC | chr3:4423...   472   e-133
Medtr3g096670.1 | F-box plant protein, putative | HC | chr3:4423...   471   e-133
Medtr8g094190.1 | F-box plant protein, putative | HC | chr8:3939...   299   2e-81
Medtr8g094150.1 | F-box plant-like protein | HC | chr8:39376619-...   260   1e-69
Medtr0095s0110.1 | F-box plant-like protein | HC | scaffold0095:...   257   1e-68

>Medtr3g096670.2 | F-box plant protein, putative | HC |
           chr3:44234632-44238356 | 20130731
          Length = 617

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/298 (77%), Positives = 250/298 (83%), Gaps = 1/298 (0%)

Query: 9   DGSSAVPNSLPEEDGLTQCIKKKSLRGYVWNSFKQILGRSNSSKGSHLVSKKLTSSSEIR 68
           D + AVP+SL  EDG TQ +K+K +  Y WNS K ILGRSNS   SH  SKKLT+SSE R
Sbjct: 318 DPARAVPDSLFGEDGGTQSVKRKGIHRYFWNSLKHILGRSNSINDSHSASKKLTTSSEKR 377

Query: 69  HARLQEFLRPSNIIRLSLNASTVKLSSYRAWPNMHDSRFALYKLPLRVARADQEFAGLWG 128
           HA+LQEFL+ SN  RL+LNAS VKL+SYRAWPNMHDSRFALYKLPLRV  ADQE+AGLWG
Sbjct: 378 HAQLQEFLKSSNTTRLTLNASNVKLTSYRAWPNMHDSRFALYKLPLRVPSADQEYAGLWG 437

Query: 129 GTFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIGTKILEGTHYVLHPNGSAMFIVNI 188
           G FGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLI TKILEGTHYVLHPNGSAMFI NI
Sbjct: 438 GAFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIATKILEGTHYVLHPNGSAMFIANI 497

Query: 189 NDPSSEPFPWDTDADSYPVNIEHSFVGEGIASGYGFRYPGSKPGSLFVFQNGVIAFTWKE 248
           N+PSSEPFPW+TDADS PVNI+H + GEGIASGYGFRYPGSKPGSLFVF NGVIAF WKE
Sbjct: 498 NEPSSEPFPWNTDADSLPVNIKHVYTGEGIASGYGFRYPGSKPGSLFVFHNGVIAFIWKE 557

Query: 249 SRAVXXXXXXXXXXXXKKGERIPSLPPVANFSYLTKSYSNVFAGFPSSSNCY-SPRKG 305
           +RAV            KKGERIPSLPP+ANFSYLTKSYSNVFAGFP+SSN   SPRK 
Sbjct: 558 TRAVLTLQRLNLQELLKKGERIPSLPPIANFSYLTKSYSNVFAGFPTSSNSLSSPRKA 615


>Medtr3g096670.1 | F-box plant protein, putative | HC |
           chr3:44234632-44237480 | 20130731
          Length = 625

 Score =  471 bits (1212), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/296 (78%), Positives = 249/296 (84%), Gaps = 1/296 (0%)

Query: 9   DGSSAVPNSLPEEDGLTQCIKKKSLRGYVWNSFKQILGRSNSSKGSHLVSKKLTSSSEIR 68
           D + AVP+SL  EDG TQ +K+K +  Y WNS K ILGRSNS   SH  SKKLT+SSE R
Sbjct: 318 DPARAVPDSLFGEDGGTQSVKRKGIHRYFWNSLKHILGRSNSINDSHSASKKLTTSSEKR 377

Query: 69  HARLQEFLRPSNIIRLSLNASTVKLSSYRAWPNMHDSRFALYKLPLRVARADQEFAGLWG 128
           HA+LQEFL+ SN  RL+LNAS VKL+SYRAWPNMHDSRFALYKLPLRV  ADQE+AGLWG
Sbjct: 378 HAQLQEFLKSSNTTRLTLNASNVKLTSYRAWPNMHDSRFALYKLPLRVPSADQEYAGLWG 437

Query: 129 GTFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIGTKILEGTHYVLHPNGSAMFIVNI 188
           G FGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLI TKILEGTHYVLHPNGSAMFI NI
Sbjct: 438 GAFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIATKILEGTHYVLHPNGSAMFIANI 497

Query: 189 NDPSSEPFPWDTDADSYPVNIEHSFVGEGIASGYGFRYPGSKPGSLFVFQNGVIAFTWKE 248
           N+PSSEPFPW+TDADS PVNI+H + GEGIASGYGFRYPGSKPGSLFVF NGVIAF WKE
Sbjct: 498 NEPSSEPFPWNTDADSLPVNIKHVYTGEGIASGYGFRYPGSKPGSLFVFHNGVIAFIWKE 557

Query: 249 SRAVXXXXXXXXXXXXKKGERIPSLPPVANFSYLTKSYSNVFAGFPSSSNCY-SPR 303
           +RAV            KKGERIPSLPP+ANFSYLTKSYSNVFAGFP+SSN   SPR
Sbjct: 558 TRAVLTLQRLNLQELLKKGERIPSLPPIANFSYLTKSYSNVFAGFPTSSNSLSSPR 613


>Medtr8g094190.1 | F-box plant protein, putative | HC |
           chr8:39394266-39396423 | 20130731
          Length = 629

 Score =  299 bits (766), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 167/342 (48%), Positives = 202/342 (59%), Gaps = 51/342 (14%)

Query: 1   MDDIRPSLDGSSAVPNSLPEEDGLTQCIKKKSLRGYVWNSFKQILG-------------- 46
           +D++R S D S A+      +D  TQCIK+KSL GY W  FK ILG              
Sbjct: 287 VDEVRKSHDYSKALSFPPSNKDNHTQCIKRKSLGGYFWGGFKHILGRSSLVDGCAVNTDQ 346

Query: 47  ------------RSNSSKGS---------HLVSKKLTSSS--------EIRHARLQEFLR 77
                       RS+S  GS          +  K+    S         I       + R
Sbjct: 347 QHNATTGARNHRRSSSIDGSVANIDQQRNMMAGKRDDQRSGTTDGIVVNIDQKHGTSYHR 406

Query: 78  PSNIIRLSLN--------ASTVKLSSYRAWPNMHDSRFALYKLPLRVARADQEFAGLWGG 129
            S+ I  S+N         +  +      WPNM+ + F LY++PL+V + DQ +AGLWGG
Sbjct: 407 RSSTIDGSINNIDQQHKMIAGTRDDRKSGWPNMNPNWFRLYQMPLQVPKEDQVYAGLWGG 466

Query: 130 TFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIGTKILEGTHYVLHPNGSAMFIVNIN 189
           T GWPP K S++KP KALFFLLLSY E +GQQLLIGTKILEG  Y LHPNGSAMFIVNIN
Sbjct: 467 TLGWPPEKSSQNKPEKALFFLLLSYWESKGQQLLIGTKILEGARYALHPNGSAMFIVNIN 526

Query: 190 DPSSEPFPWDTDADSYPVNIEHSFVGEGIASGYGFRYPGSKPGSLFVFQNGVIAFTWKES 249
           +PSS+PFPW+TD DS+P+NI+H+F GEGIA GYGF+YPG+K GSLFV QNG +AF WKES
Sbjct: 527 EPSSDPFPWETDRDSFPMNIQHAFAGEGIARGYGFKYPGAKSGSLFVLQNGDLAFVWKES 586

Query: 250 RAVXXXXXXXXXXXXKKGERIPSLPPVANFSYLTKSYSNVFA 291
           R V            KKG RIPSLPP+ NFSYL KS  NVF 
Sbjct: 587 RDVLTLQRLNLQELLKKGRRIPSLPPIDNFSYLMKSCLNVFT 628


>Medtr8g094150.1 | F-box plant-like protein | HC |
           chr8:39376619-39378987 | 20130731
          Length = 566

 Score =  260 bits (665), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/252 (56%), Positives = 172/252 (68%), Gaps = 20/252 (7%)

Query: 40  SFKQILGRSNSSKGSHLVSKKLTSSSEIRHARLQEFLRPSNIIRLSLNASTVKLSSYRAW 99
           S   I  + N++ G+      ++SS EI++A+LQ+FLR S+ +RL+L+A   KLSS+R W
Sbjct: 334 SVVNINQKHNTTAGTRESDIGISSSHEIKNAKLQDFLRSSDTLRLTLSALNAKLSSFRGW 393

Query: 100 PNMHDSRFALYKLPLRVARADQEFAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEEFQG 159
           PNM+ + F                    GGTFGWP  KPS++K  KALFFLLLSY E +G
Sbjct: 394 PNMNKNWF--------------------GGTFGWPHEKPSQNKLKKALFFLLLSYSESKG 433

Query: 160 QQLLIGTKILEGTHYVLHPNGSAMFIVNINDPSSEPFPWDTDADSYPVNIEHSFVGEGIA 219
           QQLLIGTK+LEGT Y L PNGSAMFIVNIN+PSSEPFPW+TD +S  +NIEH+FVGEGIA
Sbjct: 434 QQLLIGTKVLEGTRYALRPNGSAMFIVNINEPSSEPFPWNTDRESLSMNIEHTFVGEGIA 493

Query: 220 SGYGFRYPGSKPGSLFVFQNGVIAFTWKESRAVXXXXXXXXXXXXKKGERIPSLPPVANF 279
            G GF+YPG K GS FVFQNG +AF WKESR V            KKG RIPSLPP+ NF
Sbjct: 494 GGCGFKYPGLKSGSFFVFQNGDLAFVWKESRDVLTLQRLNLQELLKKGRRIPSLPPIDNF 553

Query: 280 SYLTKSYSNVFA 291
           SYL KS  NVF 
Sbjct: 554 SYLMKSCLNVFT 565



 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 31/50 (62%)

Query: 1   MDDIRPSLDGSSAVPNSLPEEDGLTQCIKKKSLRGYVWNSFKQILGRSNS 50
           +D +R   D S A       +D  TQCIK+KSL GY W +FK ILGRS+S
Sbjct: 203 VDQVRKHHDNSKAFAFPPINKDSHTQCIKRKSLGGYFWGNFKHILGRSSS 252


>Medtr0095s0110.1 | F-box plant-like protein | HC |
           scaffold0095:39001-38456 | 20130731
          Length = 181

 Score =  257 bits (656), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 123/180 (68%), Positives = 139/180 (77%)

Query: 112 LPLRVARADQEFAGLWGGTFGWPPGKPSEDKPGKALFFLLLSYEEFQGQQLLIGTKILEG 171
           +PL+V   DQ +AGLWGG  GWPP K S++KP KALFFLL SY E +GQQLLIGTKILEG
Sbjct: 1   MPLQVPEQDQVYAGLWGGALGWPPEKSSQNKPEKALFFLLHSYWESKGQQLLIGTKILEG 60

Query: 172 THYVLHPNGSAMFIVNINDPSSEPFPWDTDADSYPVNIEHSFVGEGIASGYGFRYPGSKP 231
             Y LHPNGSAMFIVNINDPSS+PFPW+TD DS+P+NI+H+F GEGIA GYGF+YPG+K 
Sbjct: 61  ARYALHPNGSAMFIVNINDPSSDPFPWETDRDSFPMNIQHAFAGEGIARGYGFKYPGAKS 120

Query: 232 GSLFVFQNGVIAFTWKESRAVXXXXXXXXXXXXKKGERIPSLPPVANFSYLTKSYSNVFA 291
           GSLFV QNG +AF WKESR V            KKG RIPSLPP+ NFSYL KS  NVF 
Sbjct: 121 GSLFVLQNGDLAFVWKESRDVLTLQRLNLQELLKKGRRIPSLPPIDNFSYLMKSCLNVFT 180