Miyakogusa Predicted Gene

Lj0g3v0249019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0249019.1 tr|I0IG00|I0IG00_PHYMF HIT family protein
OS=Phycisphaera mikurensis (strain NBRC 102666 / KCTC
2251,36.21,6e-17,SUBFAMILY NOT NAMED,NULL; HISTIDINE TRIAD (HIT)
PROTEIN,Histidine triad (HIT) protein; HISTRIAD,Hist,CUFF.16270.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g053220.1 | histidine triad nucleotide-binding protein | H...   253   3e-68

>Medtr7g053220.1 | histidine triad nucleotide-binding protein | HC |
           chr7:18713828-18718572 | 20130731
          Length = 203

 Score =  253 bits (647), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 123/137 (89%), Positives = 131/137 (95%), Gaps = 1/137 (0%)

Query: 1   MCLCILDTNPLSHGHSLIIPKSHFPSLDATPPSVVAAMCSKVPFISNAIMKATGCNSFNL 60
           MCLCILDTNPLSHGHSLIIPKSH+PSLDATPPSVVAAM SKVPFISNAIMKATGCNSFN+
Sbjct: 67  MCLCILDTNPLSHGHSLIIPKSHYPSLDATPPSVVAAMSSKVPFISNAIMKATGCNSFNV 126

Query: 61  LINNGAAAGQVIYHTHIHIIPRKAFDCLWASESLLRRPLNLDDDKVSQLAARIQEQLLLS 120
           LINNGAAAGQVI+HTH+HIIPRKA+DCLWASESLLRRPLNLDD+KVSQLAA IQEQLL+S
Sbjct: 127 LINNGAAAGQVIFHTHMHIIPRKAYDCLWASESLLRRPLNLDDEKVSQLAASIQEQLLVS 186

Query: 121 DSCHDSKN-EDFCSSKS 136
           D C +SKN EDFC SKS
Sbjct: 187 DICQESKNEEDFCPSKS 203