Miyakogusa Predicted Gene
- Lj0g3v0248929.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0248929.1 Non Characterized Hit- tr|B9RSM2|B9RSM2_RICCO
Ubiquitin-protein ligase, putative OS=Ricinus communis,34.71,2e-16,
,CUFF.16262.1
(126 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R... 127 2e-30
Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ... 125 1e-29
>Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R1 |
HC | chr6:6917300-6911610 | 20130731
Length = 634
Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 84/121 (69%)
Query: 1 MEEGEVETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
+++GE ILR L+RKQNLR G+N L VEFQ +LLTL+ + S +ES SLT +G SWL
Sbjct: 358 LKKGEAGAILRALLRKQNLRRGQNALVVEFQIKLLTLIVSDSDNESSSLTAGNGKNSWLK 417
Query: 61 ALGDLTLQSPLVLKDFPVEMLNEGLSGYCHLSLCDKLRLLTFICDEVLSSEKVRSHIEKE 120
L DL +S LKDFP + LN+G+SGY L L KL LL FICDE L + K+RS+I+ +
Sbjct: 418 VLEDLITESGAALKDFPADWLNKGISGYNDLDLPKKLILLNFICDEALGTMKLRSYIDDQ 477
Query: 121 N 121
N
Sbjct: 478 N 478
>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
| LC | scaffold0024:150614-158393 | 20130731
Length = 735
Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/121 (52%), Positives = 84/121 (69%)
Query: 1 MEEGEVETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
+++GE +LR L+RKQNLR G+NTL VEFQ +LLTL+ + S ES SLT +G SWL
Sbjct: 458 VKKGEAVAVLRALIRKQNLRRGQNTLVVEFQIKLLTLIVSDSETESSSLTASNGKNSWLK 517
Query: 61 ALGDLTLQSPLVLKDFPVEMLNEGLSGYCHLSLCDKLRLLTFICDEVLSSEKVRSHIEKE 120
L DL +S LK+FP + LN+G+SGY L L KL LL FICDE LS+ K+R+ I+ +
Sbjct: 518 VLEDLITESDAALKEFPADWLNKGISGYYDLDLSKKLILLNFICDEALSTMKLRNFIDDQ 577
Query: 121 N 121
N
Sbjct: 578 N 578