Miyakogusa Predicted Gene

Lj0g3v0248759.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0248759.3 Non Characterized Hit- tr|I1JLE4|I1JLE4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.84,0,DUF3453,Protein of unknown function DUF3453;
SYMPLEKIN,NULL; FAMILY NOT NAMED,NULL; ARM repeat,Armad,CUFF.16295.3
         (768 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g015850.1 | symplekin tight junction protein carboxy-termi...  1041   0.0  
Medtr3g111090.1 | symplekin tight junction protein carboxy-termi...   171   2e-42

>Medtr4g015850.1 | symplekin tight junction protein carboxy-terminal
           protein | HC | chr4:4819906-4805018 | 20130731
          Length = 1338

 Score = 1041 bits (2693), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/768 (69%), Positives = 601/768 (78%), Gaps = 7/768 (0%)

Query: 1   MVGKPMATATSRERLASLVNSANMAIDIPSKLESLRQLRLELPQEDPVXXXXXXXXXXXX 60
           MVGK MA  TSRE+LASLV+SA +A DIPSK+ESLR+L++ELPQEDPV            
Sbjct: 1   MVGKAMAV-TSREKLASLVHSAKLASDIPSKIESLRRLKIELPQEDPVLLTEFLPPIFDF 59

Query: 61  XSDHFSPVRKFVTEMVGEIGLKNTEFLSXXXXXXXXXXXXXXXXXXRQAILCGIDLFRST 120
            SD FSPVRKFVTEM+GEIGLKNTEFL                   RQAILCGI LFRST
Sbjct: 60  LSDQFSPVRKFVTEMIGEIGLKNTEFLPDIVPVLIDVLDDDTPAVVRQAILCGIRLFRST 119

Query: 121 LQKLAIQGIYSSDLDGALESAWSWMVRFKDKVYTLAFQHGSSGAKLLALKFVEAVIHLYT 180
           L+K+AIQG++SSDLD A+ESAW WMV+FKDKVY++AFQ+G  GAKLLALKFVEAVI LYT
Sbjct: 120 LEKIAIQGLFSSDLDSAVESAWEWMVKFKDKVYSIAFQNGRGGAKLLALKFVEAVIRLYT 179

Query: 181 PDPNGSSEPTPHQGRNMEFNISWLRRGHPILNVGDLSIEASHSLGLLLDQLRFPTVKSLS 240
            DPNGS+EP  HQG+   FNISWLRR HP+LN+GD+S+EAS+SLGLLLDQLRFPTVKSL 
Sbjct: 180 LDPNGSAEPNSHQGKRPVFNISWLRRDHPVLNIGDMSMEASNSLGLLLDQLRFPTVKSLG 239

Query: 241 NAVIIVVIKSLSAIAINRPAFYGRIXXXXXXXXXXXXXXNGVCVTAVHLALKNAFLSCSK 300
           N+VIIV+IKSLSAIAI RPAFYGRI              NGVCV+A HLALK AFL+C++
Sbjct: 240 NSVIIVLIKSLSAIAIERPAFYGRILPVLLSLEPSTSVVNGVCVSAAHLALKKAFLTCTE 299

Query: 301 CTHPSAAPWRDRLAGALKEMQSEGKADRVFHLISPSNGSI-QREKDDQPV-IKEEEPAVN 358
           CTHPSAAPWRDRLAGALKEMQSEGKAD+VFH IS SN SI QRE+D QPV IKEE+ A +
Sbjct: 300 CTHPSAAPWRDRLAGALKEMQSEGKADQVFHPISASNESILQREEDYQPVIIKEEDTAGS 359

Query: 359 SSDSVHIKLARKRSGSQDRGDLSVDEDVPGKRVRTIV-GLTEPKKELDDCAVNSQDDAHS 417
           S DS H+ L RKRSGSQ+  DL+ D DVPGKRVRT   GL  PK ELD+C  N+Q+D  S
Sbjct: 360 SFDSGHVNLGRKRSGSQNGSDLAEDADVPGKRVRTTTDGLKTPKMELDECTANTQNDTPS 419

Query: 418 T-PTSSKGDVENGPVQQLVAMFGALVAQGEKAVXXXXXXXXXXXXXXXXXVVMANMRYLP 476
           T P  SKGDV+NGPVQQLVAMFGALVAQGE AV                 VVMANMRYLP
Sbjct: 420 TVPAFSKGDVDNGPVQQLVAMFGALVAQGEMAVASLEILISNISADLLAEVVMANMRYLP 479

Query: 477 PNYPHAEGNDEQLHEICIFGSDDKAKYPPSFVAGVMSLSTTFPPVASLLETHRSVSNDVV 536
           PN P+A+G DEQLH+I IFGS DKAKYP SFVAGVMSLS+TFPPVASLL+ H+SVSND+V
Sbjct: 480 PNCPNADG-DEQLHDISIFGSQDKAKYPQSFVAGVMSLSSTFPPVASLLDAHQSVSNDLV 538

Query: 537 -SHEEEEISATGVGSAVVHSGMNLSAVNVSSPPDFPSSDACIPGVENGSTAMASDIHDVG 595
            S  +EEIS+TGV S+V+HSGM LS+ N  SP DFPSSD CIPGVEN ST++  DI DVG
Sbjct: 539 KSQGDEEISSTGVDSSVIHSGMILSSQNAPSPTDFPSSDTCIPGVENVSTSLPPDIDDVG 598

Query: 596 NLESGIPGLDSCGRSDXXXXXXXXXXXXXXXVQLEDADQEQVTSLDQRSSLNLVPSISTD 655
           NLESGIPGLDS GR+D               +Q+EDA QEQ TSLD RS  NLVPS+S D
Sbjct: 599 NLESGIPGLDSFGRNDALSETLAAPSLASTDMQIEDASQEQATSLDNRSPSNLVPSMSAD 658

Query: 656 RSEELSPKGVVTDANSIVSSTATSAVLPSRLVLPKMIAPVVDLADEQKDDLQMSCFMRII 715
           +SEELSPK V  D NS+VSSTATSAVLPSRLVLPKMIAPVVDLADEQ+D LQ SCFMRII
Sbjct: 659 KSEELSPKAVAPDVNSLVSSTATSAVLPSRLVLPKMIAPVVDLADEQRDHLQTSCFMRII 718

Query: 716 DALKQIAEAGGSKVRFSILAYLGVEFPLDLDPWKLLQKHILIDYTSHE 763
           DA KQI+ AGGSKVRFSILAYLGVEFPL+LDPWKLLQKHILIDY+ HE
Sbjct: 719 DAYKQISVAGGSKVRFSILAYLGVEFPLELDPWKLLQKHILIDYSGHE 766


>Medtr3g111090.1 | symplekin tight junction protein carboxy-terminal
           protein | HC | chr3:51920629-51901963 | 20130731
          Length = 1338

 Score =  171 bits (434), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 217/476 (45%), Gaps = 16/476 (3%)

Query: 11  SRERLASLVNSANMAIDIPSKLESLRQLRLELPQEDPVXXXXXXXXXXXXXSDHFSPVRK 70
           +++++ SL+ +AN   DI  K  SL+Q +  L   DP              S H   VRK
Sbjct: 7   TKDQVLSLLAAANNHGDISVKTTSLKQAKDLLLSIDPSLAADLFPYLLELQSSHQPLVRK 66

Query: 71  FVTEMVGEIGLKNTEFLSXXXXXXXXXXXXXXXXXXRQAILCGIDLFRSTLQKLAIQGIY 130
            + +++ EIG +  +                     +Q+I+ G ++F +  ++L +Q   
Sbjct: 67  LLIQIIEEIGFRAVQHSPTLISSLLTFLRDTDATVVKQSIISGTNIFCACFEELILQFQQ 126

Query: 131 SSDLDGALESAWSWMVRFKDKVYTLAFQHGSSGAKLLALKFVEAVIHLYTPDPNGSSEPT 190
              ++  LE  W WM +FK+ V+ +A + GS G KLLALKF+E  + L+T D +  SE +
Sbjct: 127 CGKVERWLEEIWMWMFKFKEAVFEIALEGGSVGIKLLALKFLEIFVLLFTSDIS-DSEKS 185

Query: 191 PHQGRNMEFNISWLRRGHPILNVGDLSIEASHSLGLLLDQLRFPTVKSLSNAVIIVVIKS 250
             +G     NISWL   HP+L+   L  EA+ ++G+LL  L+     +    + I V+  
Sbjct: 186 ATEGVRQAVNISWLVGSHPVLDPMVLMTEANRTIGILLKLLQ--CAGNTPGCLTITVVNC 243

Query: 251 LSAIAINRPAFYGRIXXXXXXXXXXXXXXNGVCVTAVHLALKNAFLSCSKCTHPSAAPWR 310
           L+AIA  R   Y  I               G  V ++  +L+ AFL   +CT+      R
Sbjct: 244 LAAIARKRSQHYDTILSALLDFDPNVQTVKGCHVPSIQYSLRTAFLGFLRCTYSPIIESR 303

Query: 311 DRLAGALKEMQSEGKADRVFHLISPSNGSIQREKDDQPVIKEEEPAVNSSDSVHIKLARK 370
           +RL  +L+ M +   AD+V   +     S  R   D  V K+++P+  +   V  + +RK
Sbjct: 304 ERLIRSLRAMNAGDAADQVIRQVDKMIKSADRFIRDARVNKDDQPS--NQLPVSGESSRK 361

Query: 371 RSGSQDRGDLSVDEDVPGKRVRTIVGLTEPKKELDDCA-VNSQDDAHS-----TPTSSKG 424
           R    D   L+   +   KR+R     + P  +    A VN     HS     +P     
Sbjct: 362 RPVPHDNEQLANGHEAIAKRIR-----SGPDSDFTLPAQVNDSGRDHSSVNGVSPNVPVL 416

Query: 425 DVENGPVQQLVAMFGALVAQGEKAVXXXXXXXXXXXXXXXXXVVMANMRYLPPNYP 480
           + E   V+Q++A+ GAL+A+GE+                   +V+ANM++LP   P
Sbjct: 417 ESELTAVEQMIAVIGALIAEGERGAKSLEILISQIHPDLLADIVIANMKHLPKAPP 472