Miyakogusa Predicted Gene

Lj0g3v0248479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0248479.1 Non Characterized Hit- tr|C6TAN4|C6TAN4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32414
PE,96.57,0,ELONGATNFCT,Elongation factor, GTP-binding domain; no
description,NULL; P-loop containing nucleoside,CUFF.16281.1
         (466 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g069440.2 | eukaryotic translation initiation factor 2 EIF...   926   0.0  
Medtr2g069440.1 | eukaryotic translation initiation factor 2 EIF...   924   0.0  
Medtr2g075870.1 | eukaryotic translation initiation factor 2 EIF...   909   0.0  
Medtr2g021300.1 | GTP-binding elongation factor Tu family protei...    75   1e-13
Medtr7g094460.1 | GTP-binding elongation factor Tu family protei...    75   2e-13
Medtr3g076660.1 | elongation factor Tu protein | HC | chr3:34457...    67   3e-11

>Medtr2g069440.2 | eukaryotic translation initiation factor 2
           EIF2-gamma-II | HC | chr2:28871269-28865988 | 20130731
          Length = 466

 Score =  926 bits (2392), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/466 (96%), Positives = 460/466 (98%)

Query: 1   MSRKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+R+GLMEQDLS LDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MARRGLMEQDLSTLDVNKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR 120
           KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR
Sbjct: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNKVDLIQENVAINQHEAIQKFIQGTVAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240
           QNKVDLIQENVAINQHEAIQKFIQGTVA  APVVPISAQLKYNIDVVCEYIVKKIPIPER
Sbjct: 181 QNKVDLIQENVAINQHEAIQKFIQGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240

Query: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSGN 300
           NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLK NQFIEVRPGI+VKD+SGN
Sbjct: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGN 300

Query: 301 IRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVF 360
           IRCTPIYSRIVSL+AEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLP+VF
Sbjct: 301 IRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVF 360

Query: 361 VELEVNFFLLRRLLGVRTKGSERQGKVTKLTKTEMLMLNIGSMSTGARVIAVKNDLAKLQ 420
           VELEVNFFLLRRLLGVRTKGSERQGKV+KLTK+E+LMLNIGSMSTGA+V AVKNDLAKLQ
Sbjct: 361 VELEVNFFLLRRLLGVRTKGSERQGKVSKLTKSEILMLNIGSMSTGAKVTAVKNDLAKLQ 420

Query: 421 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGLTLDVPPAPLLN 466
           LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAG+TLDVPPAPLL+
Sbjct: 421 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPPAPLLS 466


>Medtr2g069440.1 | eukaryotic translation initiation factor 2
           EIF2-gamma-II | HC | chr2:28873685-28866179 | 20130731
          Length = 643

 Score =  924 bits (2388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/466 (96%), Positives = 460/466 (98%)

Query: 1   MSRKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           M+R+GLMEQDLS LDV KLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 178 MARRGLMEQDLSTLDVNKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 237

Query: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR 120
           KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR
Sbjct: 238 KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR 297

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
Sbjct: 298 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 357

Query: 181 QNKVDLIQENVAINQHEAIQKFIQGTVAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240
           QNKVDLIQENVAINQHEAIQKFIQGTVA  APVVPISAQLKYNIDVVCEYIVKKIPIPER
Sbjct: 358 QNKVDLIQENVAINQHEAIQKFIQGTVADSAPVVPISAQLKYNIDVVCEYIVKKIPIPER 417

Query: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSGN 300
           NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLK NQFIEVRPGI+VKD+SGN
Sbjct: 418 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGN 477

Query: 301 IRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVF 360
           IRCTPIYSRIVSL+AEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLP+VF
Sbjct: 478 IRCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVF 537

Query: 361 VELEVNFFLLRRLLGVRTKGSERQGKVTKLTKTEMLMLNIGSMSTGARVIAVKNDLAKLQ 420
           VELEVNFFLLRRLLGVRTKGSERQGKV+KLTK+E+LMLNIGSMSTGA+V AVKNDLAKLQ
Sbjct: 538 VELEVNFFLLRRLLGVRTKGSERQGKVSKLTKSEILMLNIGSMSTGAKVTAVKNDLAKLQ 597

Query: 421 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGLTLDVPPAPLLN 466
           LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAG+TLDVPPAPLL+
Sbjct: 598 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPPAPLLS 643


>Medtr2g075870.1 | eukaryotic translation initiation factor 2
           EIF2-gamma-II | HC | chr2:31743648-31750055 | 20130731
          Length = 466

 Score =  909 bits (2349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/466 (93%), Positives = 455/466 (97%)

Query: 1   MSRKGLMEQDLSKLDVAKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60
           MSRKGLMEQDLSKLDV KL+PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF
Sbjct: 1   MSRKGLMEQDLSKLDVTKLNPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRF 60

Query: 61  KNELERNITIKLGYANAKIYKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLR 120
           KNELERNITIKLGYANAK+YKCEDERCPRPMSYKAYGSGKED+PMCDV GFEN KMKLLR
Sbjct: 61  KNELERNITIKLGYANAKLYKCEDERCPRPMSYKAYGSGKEDNPMCDVAGFENCKMKLLR 120

Query: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180
           HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL
Sbjct: 121 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIIL 180

Query: 181 QNKVDLIQENVAINQHEAIQKFIQGTVAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPER 240
           QNKVDLIQENVAINQHEAIQ+FI+GTVA GAPVVPISAQLKYNID VCEYIVKKIPIPER
Sbjct: 181 QNKVDLIQENVAINQHEAIQRFIEGTVADGAPVVPISAQLKYNIDAVCEYIVKKIPIPER 240

Query: 241 NFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSGN 300
           NF+SPPNMIVIRSFDVNKPG+EVDEIKGGVAGGSILRGVLK NQFIEVRPGI+VKD+ GN
Sbjct: 241 NFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDEDGN 300

Query: 301 IRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVF 360
           +RCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVG VLGEVGSLPEVF
Sbjct: 301 MRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGHVLGEVGSLPEVF 360

Query: 361 VELEVNFFLLRRLLGVRTKGSERQGKVTKLTKTEMLMLNIGSMSTGARVIAVKNDLAKLQ 420
           VELEVNFFLLRRLLGVRTKGSE+QGKV KLTK+E+LMLNIGSMSTGA+V AVKNDLAKLQ
Sbjct: 361 VELEVNFFLLRRLLGVRTKGSEKQGKVAKLTKSEILMLNIGSMSTGAKVTAVKNDLAKLQ 420

Query: 421 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGLTLDVPPAPLLN 466
           LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAG+TL+VPP P+LN
Sbjct: 421 LTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLEVPPTPILN 466


>Medtr2g021300.1 | GTP-binding elongation factor Tu family protein |
           HC | chr2:7236483-7239439 | 20130731
          Length = 436

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 155/367 (42%), Gaps = 78/367 (21%)

Query: 33  INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCED-ERCPRPM 91
           +N+GTIGHV HGK+T+  AI+ V                 G   AK    +D ++ P   
Sbjct: 51  VNVGTIGHVDHGKTTLTAAITKVLA---------------GEGKAKAIAFDDIDKAPEE- 94

Query: 92  SYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLI 151
             KA G     + +     +E  K    RH + VDCPGH   +  M+ GAA MDG +L++
Sbjct: 95  --KARGITIATAHVE----YETEK----RHYAHVDCPGHADYVKNMITGAAQMDGGILVV 144

Query: 152 AANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQE-------NVAINQHEAIQKFIQ 204
           +A +  P PQT EH+     + +  ++   NKVD++ +        + + +     KF  
Sbjct: 145 SAADG-PMPQTKEHILLARQVGVPSLVCFLNKVDVVDDPDLLELVEMELRELLTFYKFPG 203

Query: 205 GTVAGGAPVVPISA-----QLKYNI---------DVVCEYIVKKIPIPERNFISPPNMIV 250
             +    P+V  SA        Y +         D V EYI + +   ++ F+ P   I 
Sbjct: 204 DEI----PIVRGSALHALQGTNYELGKKAILELMDAVDEYISEPVRQLDKPFLMPIEDI- 258

Query: 251 IRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEVRPGIIVKDDSGNIRCTPIYSRI 310
              F +          +G VA G + +G +K  + +E+          G  +  P+ + +
Sbjct: 259 ---FSIQG--------RGTVATGRVEQGTIKVGEEVEIL---------GLKQGEPLKTTV 298

Query: 311 VSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLL 370
            S+   +  +     G  +G+   +   L R D   G V+ + G+L + + + E   ++L
Sbjct: 299 TSVETFKKTMDKGEGGDNVGL---LLRGLKRGDVQRGMVIAKPGTL-KTYKKFEAEIYVL 354

Query: 371 RRLLGVR 377
            +  G R
Sbjct: 355 SKDEGGR 361


>Medtr7g094460.1 | GTP-binding elongation factor Tu family protein |
           HC | chr7:37594338-37599430 | 20130731
          Length = 449

 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 83/287 (28%)

Query: 33  INIGTIGHVAHGKSTVVKAISGV-------QTVRFKN------ELERNITIKLGYANAKI 79
           +N+GTIGHV HGK+T+  AI+ V       + V F        E +R ITI   +     
Sbjct: 64  VNVGTIGHVDHGKTTLTAAITRVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVE--- 120

Query: 80  YKCEDERCPRPMSYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLN 139
                                          +E +K    RH + VDCPGH   +  M+ 
Sbjct: 121 -------------------------------YETAK----RHYAHVDCPGHADYVKNMIT 145

Query: 140 GAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQE-------NVA 192
           GAA MDG +L+++A +  P PQT EH+     + +  ++   NKVD + +        + 
Sbjct: 146 GAAQMDGGILVVSAPDG-PMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEME 204

Query: 193 INQHEAIQKF-------IQGT----VAGGAPVVPISAQLKYNIDVVCEYIVKKIPIPERN 241
           + +  +  KF       I+G+    + G    +   A LK  +D V EY    IP P R 
Sbjct: 205 LRELLSFYKFPGDDIPIIRGSALSALQGTNEEIGRKAILKL-MDAVDEY----IPDPVRQ 259

Query: 242 FISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKFNQFIEV 288
              P  M +   F +          +G VA G + +G++K    +EV
Sbjct: 260 LEKPFLMPIEDVFSIQG--------RGTVATGRVEQGIIKIGDEVEV 298


>Medtr3g076660.1 | elongation factor Tu protein | HC |
           chr3:34457933-34460232 | 20130731
          Length = 489

 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 26/161 (16%)

Query: 29  RQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCP 88
           ++  +NIGTIGHV HGK+T+  A++                  LG +  K Y   DE   
Sbjct: 89  KKPHLNIGTIGHVDHGKTTLTAALTMALA-------------SLGNSAPKKY---DEIDA 132

Query: 89  RPMSYKAYGSGKEDSPMCDVPGFENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGAL 148
            P   +A G     + +     +E       RH + VDCPGH   +  M+ GAA MDGA+
Sbjct: 133 AP-EERARGITINTATVE----YETET----RHYAHVDCPGHADYVKNMITGAAQMDGAI 183

Query: 149 LLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQE 189
           L+++  +  P PQT EH+   + + +  +++  NK D + +
Sbjct: 184 LVVSGADG-PMPQTKEHILLAKQVGVPSVVVFLNKQDQVDD 223