Miyakogusa Predicted Gene
- Lj0g3v0248049.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0248049.1 Non Characterized Hit- tr|B4FYS0|B4FYS0_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,38.24,6e-17,seg,NULL,CUFF.16193.1
(239 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g084240.3 | transmembrane protein, putative | HC | chr7:32... 174 6e-44
Medtr7g084240.1 | transmembrane protein, putative | HC | chr7:32... 174 6e-44
Medtr7g084240.2 | transmembrane protein, putative | HC | chr7:32... 174 6e-44
>Medtr7g084240.3 | transmembrane protein, putative | HC |
chr7:32506389-32504737 | 20130731
Length = 381
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 124/200 (62%), Gaps = 7/200 (3%)
Query: 44 HVLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIY 103
++LTQVLQPD +SVRE LA +KP S T+TRLVSSYFDHS+ SHLCL+L +++RAR++Y
Sbjct: 95 NILTQVLQPDANSVRETLANSKPKS-TLTRLVSSYFDHSETTSHLCLILFRTVNRAREMY 153
Query: 104 APLSDLIGILDPS-SSLSQPQCDRAYDLFLQFDRHENPFLFPHFQDLRRSFSNLRSHIQX 162
P+ DLI +L SSLSQPQCD AYDLF++F+ HENPF+FPHF LR SFS+L+ IQ
Sbjct: 154 NPVFDLISVLPADCSSLSQPQCDTAYDLFVEFNVHENPFIFPHFNTLRNSFSDLKHEIQL 213
Query: 163 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGFAAVALTPFCVPKSER 222
++GF ++ PFC+P +R
Sbjct: 214 DRRKCQHRIRLFRGANVGCAVCVLATVSIAVVTAVIVATHASIGFT--SMVPFCIPFQKR 271
Query: 223 KVRE---RLKQLDAAENGTL 239
+ ++ RLKQLDAAE+GT
Sbjct: 272 RKKKELARLKQLDAAESGTF 291
>Medtr7g084240.1 | transmembrane protein, putative | HC |
chr7:32506389-32504005 | 20130731
Length = 381
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 124/200 (62%), Gaps = 7/200 (3%)
Query: 44 HVLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIY 103
++LTQVLQPD +SVRE LA +KP S T+TRLVSSYFDHS+ SHLCL+L +++RAR++Y
Sbjct: 95 NILTQVLQPDANSVRETLANSKPKS-TLTRLVSSYFDHSETTSHLCLILFRTVNRAREMY 153
Query: 104 APLSDLIGILDPS-SSLSQPQCDRAYDLFLQFDRHENPFLFPHFQDLRRSFSNLRSHIQX 162
P+ DLI +L SSLSQPQCD AYDLF++F+ HENPF+FPHF LR SFS+L+ IQ
Sbjct: 154 NPVFDLISVLPADCSSLSQPQCDTAYDLFVEFNVHENPFIFPHFNTLRNSFSDLKHEIQL 213
Query: 163 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGFAAVALTPFCVPKSER 222
++GF ++ PFC+P +R
Sbjct: 214 DRRKCQHRIRLFRGANVGCAVCVLATVSIAVVTAVIVATHASIGFT--SMVPFCIPFQKR 271
Query: 223 KVRE---RLKQLDAAENGTL 239
+ ++ RLKQLDAAE+GT
Sbjct: 272 RKKKELARLKQLDAAESGTF 291
>Medtr7g084240.2 | transmembrane protein, putative | HC |
chr7:32506389-32504005 | 20130731
Length = 381
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 124/200 (62%), Gaps = 7/200 (3%)
Query: 44 HVLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIY 103
++LTQVLQPD +SVRE LA +KP S T+TRLVSSYFDHS+ SHLCL+L +++RAR++Y
Sbjct: 95 NILTQVLQPDANSVRETLANSKPKS-TLTRLVSSYFDHSETTSHLCLILFRTVNRAREMY 153
Query: 104 APLSDLIGILDPS-SSLSQPQCDRAYDLFLQFDRHENPFLFPHFQDLRRSFSNLRSHIQX 162
P+ DLI +L SSLSQPQCD AYDLF++F+ HENPF+FPHF LR SFS+L+ IQ
Sbjct: 154 NPVFDLISVLPADCSSLSQPQCDTAYDLFVEFNVHENPFIFPHFNTLRNSFSDLKHEIQL 213
Query: 163 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGFAAVALTPFCVPKSER 222
++GF ++ PFC+P +R
Sbjct: 214 DRRKCQHRIRLFRGANVGCAVCVLATVSIAVVTAVIVATHASIGFT--SMVPFCIPFQKR 271
Query: 223 KVRE---RLKQLDAAENGTL 239
+ ++ RLKQLDAAE+GT
Sbjct: 272 RKKKELARLKQLDAAESGTF 291