Miyakogusa Predicted Gene

Lj0g3v0247689.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0247689.1 Non Characterized Hit- tr|K3XKC9|K3XKC9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si002352,48.05,0.000000000004,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.16201.1
         (106 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g125720.1 | zinc ion-binding protein | HC | chr4:52172186-...    94   2e-20

>Medtr4g125720.1 | zinc ion-binding protein | HC |
           chr4:52172186-52176253 | 20130731
          Length = 294

 Score = 94.4 bits (233), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/58 (81%), Positives = 51/58 (87%), Gaps = 1/58 (1%)

Query: 49  HPDGTLKMKKLRKAVFKALQESGIVVNETELSETLEQKINSSSRFAIENKYVRLVAKD 106
           HPDG LKMKKLRK VFKAL+ES IVVNE ELSE +EQKINSSS FA+ENK+VRLV KD
Sbjct: 238 HPDG-LKMKKLRKVVFKALKESSIVVNENELSEAIEQKINSSSNFAVENKHVRLVVKD 294