Miyakogusa Predicted Gene
- Lj0g3v0247029.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0247029.1 Non Characterized Hit- tr|I1M0X2|I1M0X2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17715
PE,90.68,0,9-CIS-EPOXYCAROTENOID DIOXYGENASE,NULL; BETA-CAROTENE
DIOXYGENASE,Carotenoid oxygenase; RPE65,Carote,CUFF.16137.1
(441 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC | chr8:13... 849 0.0
Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 772 0.0
Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 771 0.0
Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase |... 771 0.0
Medtr5g025270.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 288 1e-77
Medtr2g070460.1 | 9-cis-epoxycarotenoid dioxygenase | HC | chr2:... 281 1e-75
Medtr5g025230.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 269 4e-72
Medtr5g025250.1 | carotenoid cleavage dioxygenase 4a-6 | HC | ch... 268 1e-71
Medtr3g110195.1 | retinal pigment epithelial membrane protein | ... 201 2e-51
Medtr3g109610.1 | carotenoid cleavage dioxygenase | HC | chr3:51... 79 1e-14
Medtr7g063800.1 | carotenoid cleavage dioxygenase | HC | chr7:23... 74 3e-13
Medtr7g045370.1 | carotenoid cleavage dioxygenase | HC | chr7:15... 62 1e-09
Medtr3g109610.2 | carotenoid cleavage dioxygenase | HC | chr3:51... 54 2e-07
>Medtr8g037315.1 | carotenoid cleavage dioxygenase | HC |
chr8:13903093-13896651 | 20130731
Length = 540
Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/440 (91%), Positives = 426/440 (96%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLK 61
MIHGLRIKDGKA+YVSRFV+TSRLKQEEYFGGSKFMKIGD+KGLFGLLMVNMQMLR KLK
Sbjct: 101 MIHGLRIKDGKATYVSRFVKTSRLKQEEYFGGSKFMKIGDMKGLFGLLMVNMQMLRAKLK 160
Query: 62 VLDGSYGHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFTA 121
V+D SYGHGTANTALVYHH KLLALSEGDKPYAIKVFEDGDLQTLG+LDYDKRL H+FTA
Sbjct: 161 VVDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNFTA 220
Query: 122 HPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIF 181
HPKVDPF+GEMFTFGYSHTPPY+TYRVISKDGFMHDPVPIT+S+PIMMHDFAITENY+IF
Sbjct: 221 HPKVDPFTGEMFTFGYSHTPPYITYRVISKDGFMHDPVPITISEPIMMHDFAITENYSIF 280
Query: 182 MDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFHNANAW 241
MDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKD+K IRWFELPNCFIFHNANAW
Sbjct: 281 MDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEKHIRWFELPNCFIFHNANAW 340
Query: 242 EEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSASTVDF 301
EEEDE+VLITCRLENP LD VGGAVKEKL++F+NELYEMRFNMKTGEASQ+KLSAS VDF
Sbjct: 341 EEEDEIVLITCRLENPNLDMVGGAVKEKLDNFANELYEMRFNMKTGEASQKKLSASAVDF 400
Query: 302 PRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLYDLGPG 361
PRVNESYTGRKQRYVYGT LDSIAKVTG+VKFDLHAKPDSGKTKLEVGGNV G YDLGPG
Sbjct: 401 PRVNESYTGRKQRYVYGTELDSIAKVTGIVKFDLHAKPDSGKTKLEVGGNVVGHYDLGPG 460
Query: 362 KFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAVVELPHRV 421
+FGSEAVYVPRVPGTDSEEDDGYLI F HDENTGKSFVHV+DAKTMSADP+AVVELP RV
Sbjct: 461 RFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVLDAKTMSADPVAVVELPQRV 520
Query: 422 PYGFHAFFVTEDQLQEQAKL 441
PYGFHAFFVTE+QLQEQAKL
Sbjct: 521 PYGFHAFFVTEEQLQEQAKL 540
>Medtr8g037290.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13873459-13869022 | 20130731
Length = 575
Score = 772 bits (1993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/440 (84%), Positives = 402/440 (91%), Gaps = 2/440 (0%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLK 61
MIHGLRIKDGKA+YVS FVRTSRLKQEEYFGG KFMKIGD+KGL GLLMV +Q LR KLK
Sbjct: 138 MIHGLRIKDGKATYVSHFVRTSRLKQEEYFGGCKFMKIGDVKGLLGLLMVTIQTLREKLK 197
Query: 62 VLDGSYGHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFTA 121
+LD SYG GTANT LVYH+GKLLALSE DKPYAIKVFEDGDL TLG+LDYDKRLDH FT+
Sbjct: 198 ILDVSYGTGTANTGLVYHNGKLLALSERDKPYAIKVFEDGDLHTLGILDYDKRLDHYFTS 257
Query: 122 HPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIF 181
HPK+DP++GEMFTFGY+ TPPY+TYRVISKDG+M+DPVPIT+SDPIM+HDFAITENYAIF
Sbjct: 258 HPKLDPYTGEMFTFGYAQTPPYITYRVISKDGYMYDPVPITISDPIMVHDFAITENYAIF 317
Query: 182 MDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFHNANAW 241
MDLP+YFRPKEMVKN LIFSFDSTKKARFGVLPRYAKDDK IRWFELPNCFIFHNANAW
Sbjct: 318 MDLPVYFRPKEMVKNNKLIFSFDSTKKARFGVLPRYAKDDKLIRWFELPNCFIFHNANAW 377
Query: 242 EEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSASTVDF 301
EEEDEVV+ITCRL+N +LD V VK+KLESFSNELYEMRFNMKTG+ASQ+KLSA ++DF
Sbjct: 378 EEEDEVVMITCRLKNLDLDMVSEDVKDKLESFSNELYEMRFNMKTGKASQKKLSAFSIDF 437
Query: 302 PRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLYDLGPG 361
PRVNE YTGRKQ+YVYGTILDSI TG+VKFDL AKPD GKTKLEVGGNV G+YDLG G
Sbjct: 438 PRVNERYTGRKQKYVYGTILDSIT--TGIVKFDLSAKPDFGKTKLEVGGNVHGIYDLGRG 495
Query: 362 KFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAVVELPHRV 421
F S+ +YVPRVPGTDSEEDDGYLI F HDEN KSFVHVIDAKTMSADP+AVVELP RV
Sbjct: 496 TFCSDPIYVPRVPGTDSEEDDGYLIFFVHDENIRKSFVHVIDAKTMSADPVAVVELPQRV 555
Query: 422 PYGFHAFFVTEDQLQEQAKL 441
PYGFHAFF+TEDQLQEQAKL
Sbjct: 556 PYGFHAFFLTEDQLQEQAKL 575
>Medtr8g037310.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13895762-13890670 | 20130731
Length = 575
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/440 (83%), Positives = 405/440 (92%), Gaps = 2/440 (0%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLK 61
MIHGLRIKDGKA+YVSRFVRTSRLKQEEYFGGSKFMK+GD+KGL G+LMV +Q+LR KLK
Sbjct: 138 MIHGLRIKDGKATYVSRFVRTSRLKQEEYFGGSKFMKVGDIKGLLGVLMVTIQILREKLK 197
Query: 62 VLDGSYGHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFTA 121
+LD SYG GTANT LVYH+ LLALSE DKPYAIKVFEDGDL TLG+LDYDKRLDH FTA
Sbjct: 198 ILDVSYGTGTANTGLVYHNAMLLALSERDKPYAIKVFEDGDLHTLGMLDYDKRLDHYFTA 257
Query: 122 HPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIF 181
HPKVDPF+G+MFTFGYS TPPY+TYRVISKDG+MHDPVPIT+S+PIM+HDFAITENYAIF
Sbjct: 258 HPKVDPFTGDMFTFGYSQTPPYITYRVISKDGYMHDPVPITISNPIMVHDFAITENYAIF 317
Query: 182 MDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFHNANAW 241
MDLP+YFRPKEMVKNK L+FSFDSTKKARFGVLPRYAKDDK IRWFELPNCFIFHNANAW
Sbjct: 318 MDLPVYFRPKEMVKNKRLVFSFDSTKKARFGVLPRYAKDDKHIRWFELPNCFIFHNANAW 377
Query: 242 EEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSASTVDF 301
EEEDEVVLITCRL+N +LD V +K+KL++FSNELYEMRFNMKTG+A+Q+KLS +VDF
Sbjct: 378 EEEDEVVLITCRLKNLDLDMVAEDIKDKLKNFSNELYEMRFNMKTGKAAQKKLSTYSVDF 437
Query: 302 PRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLYDLGPG 361
PRVNE YTGRKQ+YVYGTIL S A TG++KFDL+A+P+ GKTKLEVGGN+ GLYDLGPG
Sbjct: 438 PRVNERYTGRKQKYVYGTILGSNA--TGIIKFDLNAEPNFGKTKLEVGGNIHGLYDLGPG 495
Query: 362 KFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAVVELPHRV 421
F S+A+YVPRVPGTDS+EDDGYLI F HDENT KS VHVIDAKTMSADP+AVVELP RV
Sbjct: 496 TFCSDAIYVPRVPGTDSDEDDGYLIFFVHDENTRKSSVHVIDAKTMSADPVAVVELPQRV 555
Query: 422 PYGFHAFFVTEDQLQEQAKL 441
PYGFHAFFVTEDQLQEQAKL
Sbjct: 556 PYGFHAFFVTEDQLQEQAKL 575
>Medtr8g037275.1 | carotenoid 9,10(9',10')-cleavage dioxygenase | HC
| chr8:13854442-13849769 | 20130731
Length = 575
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/440 (84%), Positives = 401/440 (91%), Gaps = 2/440 (0%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLK 61
MIHGLRIKDGKA+YVS FVRTSRLKQEEYFGG KFMKIGD+KGL GLLMV +Q LR KLK
Sbjct: 138 MIHGLRIKDGKATYVSHFVRTSRLKQEEYFGGCKFMKIGDVKGLLGLLMVTIQTLREKLK 197
Query: 62 VLDGSYGHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFTA 121
+LD SYG GTANT LVYH+GKLLALSE DKPYAIKVFEDGDL TLG+LDY+KRLDH FTA
Sbjct: 198 ILDVSYGTGTANTGLVYHNGKLLALSERDKPYAIKVFEDGDLHTLGMLDYEKRLDHYFTA 257
Query: 122 HPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPITVSDPIMMHDFAITENYAIF 181
HPKVDPF+GEMFTFGYS TPPY+TYRVISKDG+M+DPVPIT+SDPIM+HDFAITENYAIF
Sbjct: 258 HPKVDPFTGEMFTFGYSQTPPYITYRVISKDGYMYDPVPITISDPIMVHDFAITENYAIF 317
Query: 182 MDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFHNANAW 241
MDLP+YFRPKEMVKN LIFSFDSTKKARFGVLPRYAKDDK IRWFELPNCFIFHNANAW
Sbjct: 318 MDLPVYFRPKEMVKNNKLIFSFDSTKKARFGVLPRYAKDDKLIRWFELPNCFIFHNANAW 377
Query: 242 EEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSASTVDF 301
EEED+VVLITCRL N +LD V VK+KLESFS +LYEMRFNMKTG+ASQ+KLSA +VDF
Sbjct: 378 EEEDQVVLITCRLNNLDLDMVSEDVKDKLESFSTQLYEMRFNMKTGKASQKKLSAFSVDF 437
Query: 302 PRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLYDLGPG 361
PRVNE YTGRKQ+YVYGTILDSI TG+VKFDL AKPD GKTKLE+GGNV G+YDLG G
Sbjct: 438 PRVNERYTGRKQKYVYGTILDSIP--TGIVKFDLSAKPDFGKTKLEIGGNVHGIYDLGQG 495
Query: 362 KFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAVVELPHRV 421
F S+ +YVPRVPGTDS+EDDGYLI F HDENT KSFVHVIDAKTMSADP+AVVELP RV
Sbjct: 496 TFCSDPIYVPRVPGTDSDEDDGYLIFFVHDENTRKSFVHVIDAKTMSADPVAVVELPQRV 555
Query: 422 PYGFHAFFVTEDQLQEQAKL 441
PYGFH+FF+TEDQLQEQAKL
Sbjct: 556 PYGFHSFFMTEDQLQEQAKL 575
>Medtr5g025270.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10254367-10256492 | 20130731
Length = 581
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 249/441 (56%), Gaps = 25/441 (5%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLK 61
M+H + I +GKA+ SR+V+T + K E G + G L+ + T +
Sbjct: 157 MLHAITISNGKATLCSRYVQTYKYKIENEAGYQLIPNV--FSGFNSLIASAARGSVTAAR 214
Query: 62 VLDGSY----GHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDH 117
V+ G Y G G ANT+L KL AL E D PY I + +GD+QT+G D++ +L
Sbjct: 215 VISGQYNPSNGIGLANTSLALFGNKLFALGESDLPYEINLTPNGDIQTIGRYDFNGKLSM 274
Query: 118 SFTAHPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPI-TVSDPIMMHDFAITE 176
S TAHPK+D +GE F F Y PP++TY +G H+ VP+ +++ P +HDFAIT+
Sbjct: 275 SMTAHPKIDGDTGETFAFRYGPMPPFLTYFRFDANGVKHNDVPVFSMTRPSFLHDFAITK 334
Query: 177 NYAIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFH 236
YA+F D+ L P +M+ + + S D +K +R G+LPRYA D+ +++WF++P I H
Sbjct: 335 KYAVFTDIQLGMNPLDMISGGSPVGS-DPSKVSRIGILPRYASDESKMKWFDVPGFNIMH 393
Query: 237 NANAWEEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSA 296
N+W+ ED+ +T L P + ++ + E+LE + +++ N+KTG S+Q LSA
Sbjct: 394 AINSWDGEDDEETVT--LIAPNVLSIEHTM-ERLELVHAMIEKVKINIKTGIVSRQPLSA 450
Query: 297 STVDFPRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLY 356
+DF +N Y G+K R+VY I + + K++GVVK D+ + G G
Sbjct: 451 RNLDFAVINGDYMGKKNRFVYAAIGNPMPKISGVVKIDV------------LKGEEVGCR 498
Query: 357 DLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAVVE 416
G G +G E +V R G EEDDGYL+ + HDE G+S V+DAK+ + +A V+
Sbjct: 499 LYGEGCYGGEPFFVAREDG--EEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAEVK 556
Query: 417 LPHRVPYGFHAFFVTEDQLQE 437
LP RVPYGFH FV E + +
Sbjct: 557 LPRRVPYGFHGLFVKESDITK 577
>Medtr2g070460.1 | 9-cis-epoxycarotenoid dioxygenase | HC |
chr2:29673292-29670860 | 20130731
Length = 610
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 249/447 (55%), Gaps = 35/447 (7%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMK-IGDLKGLFGLLMVNMQMLRTKL 60
M+H ++ +G SY RF T RL QE+ G F K IG+L G G+ + + R+
Sbjct: 188 MVHAVKFTNGSVSYSCRFTETHRLAQEKALGRPVFPKAIGELHGHSGIARLALYYARSLC 247
Query: 61 KVLDGSYGHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSFT 120
++DG++G G AN LVY + +LLA+SE D PY I+V +GDL T+ D+D +L +
Sbjct: 248 GLVDGTHGMGVANAGLVYFNNRLLAMSEDDIPYHIRVTPNGDLTTVCRYDFDNQLKSTMI 307
Query: 121 AHPKVDPFSGEMFTFGYSHT-PPYVTYRVISKDGFMHDPVPITVSDPIMMHDFAITENYA 179
AHPKVDP M+ Y PY+ Y G V I + P MMHDFAITEN+
Sbjct: 308 AHPKVDPVDKNMYALSYDVVQKPYLKYFRFDASGVKSPDVEIPLEQPTMMHDFAITENFV 367
Query: 180 IFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFHNAN 239
+ D + F+ EM++ + + +D K +RFGVL + A+D ++ W + P CF FH N
Sbjct: 368 VVPDQQVVFKLGEMIRGGSPVV-YDKEKVSRFGVLSKNAEDSSEMIWIDAPECFCFHLWN 426
Query: 240 AWE--EEDEVVLI-TCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSA 296
AWE E DEVV+I +C D++ +E LES L E+R N+KTG+++++ +
Sbjct: 427 AWEEPENDEVVVIGSCMT---PADSIFNECEENLESV---LSEIRLNLKTGKSTRRPIIK 480
Query: 297 ST----VDFPRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNV 352
+ ++ VN++ GRK ++ Y + + KV+G K DL SG+ K
Sbjct: 481 ESEQVNLEAGMVNKNKLGRKTQFAYLALAEPWPKVSGFAKVDLF----SGEVK------- 529
Query: 353 QGLYDLGPGKFGSEAVYVPRVPGTDSE-EDDGYLILFAHDENTGKSFVHVIDAKTMSADP 411
Y G +FG E ++ +P +DSE EDDGY++ F HDE KS + +++A T+ +
Sbjct: 530 --KYIYGENRFGGEPLF---LPNSDSENEDDGYILTFVHDEKEWKSELQIVNAATLKLE- 583
Query: 412 IAVVELPHRVPYGFHAFFVTEDQLQEQ 438
A ++LP RVPYGFH F+ + L++Q
Sbjct: 584 -ASIQLPSRVPYGFHGTFINSNDLKKQ 609
>Medtr5g025230.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10231380-10229377 | 20130731
Length = 578
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/443 (35%), Positives = 241/443 (54%), Gaps = 30/443 (6%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLK 61
M+H + I +GKA+ SR+V+T + K E G + G L+ + + +
Sbjct: 155 MLHAITISNGKATLCSRYVKTYKYKIENKAGHQLIPNV--FSGFNSLIALAARGSVVVAR 212
Query: 62 VLDGSY----GHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDH 117
VL G Y G G NT+L +L AL E D PY +K+ +GD+QT+G D++ +L
Sbjct: 213 VLTGQYNPSNGIGLVNTSLALFGNRLFALGESDLPYEVKLTPNGDIQTMGRYDFNGKLLM 272
Query: 118 SFTAHPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPI-TVSDPIMMHDFAITE 176
S TAHPK+D + E F F Y P++TY +G H+ VP+ ++ P +HDFAIT+
Sbjct: 273 SMTAHPKIDSDTSECFAFRYGPIRPFLTYFRFDSNGVKHNDVPVFSMKRPSFLHDFAITK 332
Query: 177 NYAIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFH 236
YA+F D+ L P M+ + + S D +K +R G+LPRYA D+ +++WF++P I H
Sbjct: 333 KYAVFADIQLEMNPLGMIFGGSPVRS-DPSKVSRIGILPRYANDESKMKWFDVPGFNIMH 391
Query: 237 NANAWEEED--EVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKL 294
NAW+EED V L+ + + + V E+++ + ++R N++TG ++Q L
Sbjct: 392 TINAWDEEDGGTVTLVATNILSVQ------HVMERMDLIHAMIEKVRINVETGLVTRQPL 445
Query: 295 SASTVDFPRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQG 354
SA +D +N + G+K R+VY I + + K +GVVK D+ + G G
Sbjct: 446 SARNLDLAVINNDFLGKKSRFVYAAIGNPMPKFSGVVKIDV------------LKGEEVG 493
Query: 355 LYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAV 414
G G +G E +V G EEDDGYL+ + HDE G+S V+DAK+ + +A
Sbjct: 494 CRLYGEGCYGGEPFFVAMEGG--EEEDDGYLVSYVHDEKKGESKFLVMDAKSPEFEIVAE 551
Query: 415 VELPHRVPYGFHAFFVTEDQLQE 437
V+LP RVPYGFH FV + + +
Sbjct: 552 VKLPRRVPYGFHGLFVKQSDITK 574
>Medtr5g025250.1 | carotenoid cleavage dioxygenase 4a-6 | HC |
chr5:10240138-10238399 | 20130731
Length = 579
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 241/439 (54%), Gaps = 26/439 (5%)
Query: 2 MIHGLRIKDGKASYVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQMLRTKLK 61
M+H ++I +GKA+ SR+V+T + K E G + G L+ + + +
Sbjct: 156 MLHAVKITNGKATLCSRYVQTYKYKIENEAGYQILPNV--FSGFNSLIGLAARGSVAVAR 213
Query: 62 VLDGSY----GHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDH 117
VL G Y G G NT+L +L AL E D PY IKV +GD+QT+G D++ +L
Sbjct: 214 VLTGQYNPINGIGLINTSLALFGNRLFALGESDLPYEIKVTPNGDIQTIGRYDFNGKLFM 273
Query: 118 SFTAHPKVDPFSGEMFTFGYSHTPPYVTYRVISKDGFMHDPVPI-TVSDPIMMHDFAITE 176
+ TAHPK+D +GE F + Y P++TY +G H+ VP+ ++ P +HDFAIT+
Sbjct: 274 NMTAHPKIDSDTGECFAYRYGLIRPFLTYFRFDSNGVKHNDVPVFSMKRPSFLHDFAITK 333
Query: 177 NYAIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNCFIFH 236
YA+F D+ L P +M+ + + S D +K R G+LPRYA ++ +++WF++P I H
Sbjct: 334 KYALFADIQLEINPLDMIFGGSPVRS-DPSKVPRIGILPRYADNESKMKWFDVPGLNIMH 392
Query: 237 NANAWEEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQKLSA 296
NAW+EED T + P + V + E+LE + ++R N++TG ++Q LSA
Sbjct: 393 LINAWDEEDGK---TVTIVAPNILCVEHMM-ERLELIHEMIEKVRINVETGIVTRQPLSA 448
Query: 297 STVDFPRVNESYTGRKQRYVYGTILDSIAKVTGVVKFDLHAKPDSGKTKLEVGGNVQGLY 356
+D +N + G+K R++Y I + + K +GVVK D+ + G G
Sbjct: 449 RNLDLAVINNEFLGKKHRFIYAAIGNPMPKFSGVVKIDV------------LKGEEVGCR 496
Query: 357 DLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHVIDAKTMSADPIAVVE 416
G +G E +V R G EEDDGYL+ + HDE G+S V+DAK+ + +A V+
Sbjct: 497 LYGEDCYGGEPFFVAREDG--EEEDDGYLVSYVHDEKKGESRFLVMDAKSPEFEIVAEVK 554
Query: 417 LPHRVPYGFHAFFVTEDQL 435
LP RVPYGFH FV E +
Sbjct: 555 LPRRVPYGFHGLFVKESDI 573
>Medtr3g110195.1 | retinal pigment epithelial membrane protein | HC
| chr3:51201204-51196407 | 20130731
Length = 586
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 216/449 (48%), Gaps = 37/449 (8%)
Query: 2 MIHGLRIKDGKAS-----YVSRFVRTSRLKQEEYFGGSKFMKIGDLKGLFGLLMVNMQML 56
M+H L K Y ++ V T K E+ F+ + L L L
Sbjct: 147 MLHALYFKKSNHGSWTVLYNNKHVETETYKLEKQRNKPLFLPAIEGNSLAILSAYLFNWL 206
Query: 57 RTKLKVLDGSYGHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLD 116
R+ G +NT + H GK +++E P I +F L+TL + +
Sbjct: 207 RS------GKVNKYISNTNVFEHSGKFYSVAESHMPQEIDIF---SLKTLNNWELSAAWN 257
Query: 117 HSFTAHPKVDPFSGEMFTFGYSHTPPYVTYRVISKDG--FMHDPVPITVSDPIMMHDFAI 174
FT+HPK P +GE+ T G P+ +IS DG +H V I ++ + HD +
Sbjct: 258 RPFTSHPKKAPITGELVTLGVEPIKPFAVVGIISADGKKLVHK-VDIKLNRCSLCHDIGV 316
Query: 175 TENYAIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKQIRWFEL-PNCF 233
T+ Y + MD PL +++ LI +D + AR GV+PRY + I+WFE+ PNC
Sbjct: 317 TQRYNVIMDFPLTIDLNRLLRGGQLI-KYDRKEYARIGVMPRYGNAN-SIKWFEVEPNC- 373
Query: 234 IFHNANAWEEEDEVVLITCRLENPELDNVGGAVKEKLESFSNELYEMRFNMKTGEASQQK 293
FH N++E+ DEVV+ CR + + + KE E S +E R NM TGE ++
Sbjct: 374 TFHIINSFEDGDEVVVRGCRSLDSLIPEPDPSSKE-FEWLS-RCHEWRLNMLTGEVKEKD 431
Query: 294 LSASTV---DFPRVNESYTGRKQRYVYGTILDSIAKVT-------GVVKFDLH-AKPDSG 342
L + + DFP +NE++ G K RY Y ++D + T G+ K L +
Sbjct: 432 LCGNKLVYMDFPMINENFVGVKHRYAYTQVVDPTSSTTQDVPKYRGIAKLYLEETCAEFS 491
Query: 343 KTKLEVGGNVQGLYDL-GPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFVHV 401
+K E ++ Y + F + A +VPR G EEDDG +I F H+E+T S VH+
Sbjct: 492 MSKREKEEPIRMEYHMFEKNTFCNGAAFVPRDGGV--EEDDGLIITFVHNEDTNTSQVHI 549
Query: 402 IDAKTMSADPIAVVELPHRVPYGFHAFFV 430
ID K S + +A +E+P RVPYGFH F+
Sbjct: 550 IDTKNFSGETVAKIEIPFRVPYGFHGAFM 578
>Medtr3g109610.1 | carotenoid cleavage dioxygenase | HC |
chr3:51268479-51271917 | 20130731
Length = 565
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 165/398 (41%), Gaps = 53/398 (13%)
Query: 61 KVLDGSYGHGTANTALV-YHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSF 119
+ GS ANT +V G+++ L+E K V + L+T+G DY L
Sbjct: 190 NLFSGSSLTDNANTGVVKLGDGRVVCLTETQK--GSIVIDPDTLETIGKFDYSDSLGGLI 247
Query: 120 -TAHPKVDPFSGEMFTFGYSHTPP-YVTYRVISKDGFMHDPVPITV-----SDPIMMHDF 172
+AHP V E T P Y+ R+ + G V V + P +H F
Sbjct: 248 HSAHPIVT--DNEFLTLIPDLVKPGYLVARM--EPGSNERKVIGRVDCRGGTSPGWVHSF 303
Query: 173 AITENYAIFMDLPLYFRPKEMVKNK-TLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPN 231
+TE+Y I ++PL + + +++ + T ++ F +++ + K + E+P
Sbjct: 304 PVTEHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVEVPL 363
Query: 232 CFIFHNANAWEEEDE-----VVLITCRLENPELDNVGGAVKEKLESFSNE-----LYEMR 281
FH NA+EEEDE V+ C N D + + L SF+ E R
Sbjct: 364 FVTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLRLQNLRSFNGEDVLPDARVGR 423
Query: 282 FNMKTGEASQQKLSAST--------VDFPRVNESYTGRKQRYVYGTILDSIAKVTG-VVK 332
F + + L A+ +D +N +Y G K RY Y + K
Sbjct: 424 FRIPLDGSPYGTLDAALDPNEHGKGMDMCSINPNYLGLKYRYAYACGAQRPCNFPNTLTK 483
Query: 333 FDLHAKPDSGKTKLEVGGNVQGLYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDE 392
DL ++ + Y+ G SE +VPR PG ++EDDG +I ++
Sbjct: 484 IDLQSE------------RAKNWYE--EGAVPSEPFFVPR-PGA-TKEDDGVVISIISEK 527
Query: 393 NTGKSFVHVIDAKTMSADPIAVVELPHRVPYGFHAFFV 430
N G+ + V+D T + IA + P+ +PYG H +V
Sbjct: 528 N-GEGYALVLDGSTF--EEIARAKFPYGLPYGLHGCWV 562
>Medtr7g063800.1 | carotenoid cleavage dioxygenase | HC |
chr7:23306587-23309717 | 20130731
Length = 565
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 163/397 (41%), Gaps = 53/397 (13%)
Query: 62 VLDGSYGHGTANTALV-YHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSF- 119
+ GS ANT +V G+++ L+E K V + L+T+G +Y L
Sbjct: 191 LFSGSSLTDNANTGVVKLGDGRVVCLTETQK--GSIVIDPDTLETIGKFEYSDSLGGLIH 248
Query: 120 TAHPKVDPFSGEMFTFGYSHTPP-YVTYRVISKDGFMHDPVPITV-----SDPIMMHDFA 173
+AHP V E T P Y+ R+ + G V V + P +H F
Sbjct: 249 SAHPIVT--DKEFLTLIPDLIKPGYMVARM--EPGSNERKVIGRVDCRAGTSPGWVHSFP 304
Query: 174 ITENYAIFMDLPLYFRPKEMVKNK-TLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPNC 232
+T++Y I ++PL + + +++ + T ++ F +++ + K + +P
Sbjct: 305 VTQHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVNVPLF 364
Query: 233 FIFHNANAWEEEDE-----VVLITCRLENPELDNVGGAVKEKLESFSN-----ELYEMRF 282
FH NA+EEEDE V+ C N D + + L SF+ + RF
Sbjct: 365 VTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLKLQNLRSFNGKDVLPDARVGRF 424
Query: 283 NMKTGEASQQKLSAST--------VDFPRVNESYTGRKQRYVYGTILDSIAKVTG-VVKF 333
+ + L A +D +N +Y G K RY Y + K
Sbjct: 425 RIPLDGSPYGTLEAELDPNEHGKGMDMCSINPNYLGLKYRYAYACGAQRPCNFPNTLTKI 484
Query: 334 DLHAKPDSGKTKLEVGGNVQGLYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDEN 393
DL ++ + Y+ G SE +VPR PG +EEDDG +I ++N
Sbjct: 485 DLQSE------------RAKNWYE--EGAVPSEPFFVPR-PGA-TEEDDGVVISIISEKN 528
Query: 394 TGKSFVHVIDAKTMSADPIAVVELPHRVPYGFHAFFV 430
G+ + V+D T + IA + P+ +PYG H +V
Sbjct: 529 -GEGYALVLDGSTF--EEIATAKFPYGLPYGLHGCWV 562
>Medtr7g045370.1 | carotenoid cleavage dioxygenase | HC |
chr7:15960760-15955054 | 20130731
Length = 621
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 109/518 (21%), Positives = 202/518 (38%), Gaps = 135/518 (26%)
Query: 11 GKASYVSRFVRTSRLKQEEY---FGGSKFMKIGDLKGLFGLLMVNMQMLRTKLKVLDGSY 67
+ Y++++++T + EEY G +F +G F +L ++ TK+
Sbjct: 141 NEVKYMAKYIKT-EAQVEEYDRKTGSWRFTH----RGPFSVLKGGKKIGNTKVM------ 189
Query: 68 GHGTANTALVYHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDY-------DKRLDHS-- 118
ANT+++ KLL + EG PY I E G L T+G + D ++H
Sbjct: 190 -KNVANTSVLMWGKKLLCMWEGGNPYEI---ESGTLDTIGKFNMVDGCDMDDHNVNHGGD 245
Query: 119 -----------------------FTAHPKVDPFSGEMFTFG------------YSHTPPY 143
+H KVD + T ++ T
Sbjct: 246 VWEVAATLLKPILYGIFKMPPKRLLSHYKVDSSRSRLLTVSCNAEDMLLPRSSFTFTEYD 305
Query: 144 VTYRVISKDGFMHDPVPITVSDPIMMHDFAITE-NYAIFMD---LPLYFRPKEMVKNKTL 199
++++ K F + D +M+HD+A T+ +Y +F + L + + +
Sbjct: 306 NNFKLVEKQEF-------KIPDHLMIHDWAFTDTHYIVFANRIKLDVLGSMGAVCGASPM 358
Query: 200 IFSFD---STKKARFGVLPRYAK--DDKQIRW---FELPN-CFIFHNANAWEE------- 243
I + S + +LPR+ + K+ W E+P+ ++ H NA+E
Sbjct: 359 ISALTVNPSKSTSPIYLLPRFPNKPESKKRDWRKPLEVPSQLWLLHVGNAFEVKQAHGNL 418
Query: 244 EDEVVLITCRLE-----------------NPELDNVGGA-VKEKLESFSNELYEMRFNMK 285
E ++ C + +P + NV G L S +L + +N +
Sbjct: 419 EIQIQASACSYQWFNFRKLFGYNWQTQKLDPSIMNVKGENALPHLVQVSIKL-DSDYNCQ 477
Query: 286 TGEASQQKLSASTVDFPRVNESYTGRKQRYVY-GTILDSIAKVTG-----VVKFDLHAKP 339
+ + DFP N S++G++ +Y+Y T L S + +VKFDL
Sbjct: 478 ECDVKPINKWKKSADFPATNPSFSGKQNKYLYAATTLGSRKTLPSFPFDTIVKFDL---- 533
Query: 340 DSGKTKLEVGGNVQGLYDLGPGKFGSEAVYVPRVPGTDSEEDDGYLILFAHDENTGKSFV 399
V +V+ + G KF E ++VP+ EEDDGYL++ + + + +
Sbjct: 534 --------VNNSVKA-WTAGSRKFVGEPIFVPK----GEEEDDGYLLVVEYATSMQRCCL 580
Query: 400 HVIDAKTMSADP--IAVVELPHRV--PYGFHAFFVTED 433
+++ K + +A +E+P + P GFH + +
Sbjct: 581 VILNPKEIGTKKALVARIEIPMHLNFPLGFHGLWAATE 618
>Medtr3g109610.2 | carotenoid cleavage dioxygenase | HC |
chr3:51268545-51271852 | 20130731
Length = 503
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 33/286 (11%)
Query: 61 KVLDGSYGHGTANTALV-YHHGKLLALSEGDKPYAIKVFEDGDLQTLGLLDYDKRLDHSF 119
+ GS ANT +V G+++ L+E K V + L+T+G DY L
Sbjct: 190 NLFSGSSLTDNANTGVVKLGDGRVVCLTETQK--GSIVIDPDTLETIGKFDYSDSLGGLI 247
Query: 120 -TAHPKVDPFSGEMFTFGYSHTPP-YVTYRVISKDGFMHDPVPITV-----SDPIMMHDF 172
+AHP V E T P Y+ R+ + G V V + P +H F
Sbjct: 248 HSAHPIVT--DNEFLTLIPDLVKPGYLVARM--EPGSNERKVIGRVDCRGGTSPGWVHSF 303
Query: 173 AITENYAIFMDLPLYFRPKEMVKNK-TLIFSFDSTKKARFGVLPRYAKDDKQIRWFELPN 231
+TE+Y I ++PL + + +++ + T ++ F +++ + K + E+P
Sbjct: 304 PVTEHYVIVPEMPLRYCAQNLLRAEPTPLYKFQWHPESKAFMHVMCKTSGKIVASVEVPL 363
Query: 232 CFIFHNANAWEEEDE-----VVLITCRLENPELDNVGGAVKEKLESFSNE-----LYEMR 281
FH NA+EEEDE V+ C N D + + L SF+ E R
Sbjct: 364 FVTFHFINAYEEEDEDGRVTAVIADCCEHNSNTDILDKLRLQNLRSFNGEDVLPDARVGR 423
Query: 282 FNMKTGEASQQKLSAST--------VDFPRVNESYTGRKQRYVYGT 319
F + + L A+ +D +N +Y G K RY Y
Sbjct: 424 FRIPLDGSPYGTLDAALDPNEHGKGMDMCSINPNYLGLKYRYAYAC 469