Miyakogusa Predicted Gene
- Lj0g3v0246179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0246179.1 Non Characterized Hit- tr|I1MCM5|I1MCM5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,85.81,0,COATOMER BETA
SUBUNIT,NULL; COATOMER,NULL; seg,NULL; coiled-coil,NULL;
Coatomer_WDAD,Coatomer, WD as,CUFF.16123.1
(298 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g102277.2 | coatomer subunit beta-like protein | HC | chr2... 463 e-131
Medtr2g102277.3 | coatomer subunit beta-like protein | HC | chr2... 463 e-131
Medtr2g102277.4 | coatomer subunit beta-like protein | HC | chr2... 442 e-124
Medtr2g102277.1 | coatomer subunit beta-like protein | HC | chr2... 442 e-124
Medtr4g011950.1 | coatomer subunit beta-like protein | HC | chr4... 417 e-117
Medtr4g006350.1 | coatomer WD associated domain protein | LC | c... 244 6e-65
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 50 3e-06
>Medtr2g102277.2 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 921
Score = 463 bits (1191), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/298 (80%), Positives = 244/298 (81%), Gaps = 7/298 (2%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLGRLEVAK IAIEVQSESKWKQLGELAMS+GKL+MAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
L HA D DAEGIS LATLAKEQGKNNVAFLCLFMLGKLEDCLQLL+ESN
Sbjct: 691 LNHAMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLIESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKV EIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVPEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEEEPLENGDSNYXXXXXXXXXXXX 240
KA ETRNVYPPAEQYI+HADKSHVTLVEAFRNMQIEEEEPLENGDSN+
Sbjct: 811 KAAETRNVYPPAEQYINHADKSHVTLVEAFRNMQIEEEEPLENGDSNH-------ELTEQ 863
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA 298
AVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA
Sbjct: 864 NEEHYTEEEHYTEEQNGEEGSQEEAVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA 921
>Medtr2g102277.3 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056785 | 20130731
Length = 921
Score = 463 bits (1191), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/298 (80%), Positives = 244/298 (81%), Gaps = 7/298 (2%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLGRLEVAK IAIEVQSESKWKQLGELAMS+GKL+MAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
L HA D DAEGIS LATLAKEQGKNNVAFLCLFMLGKLEDCLQLL+ESN
Sbjct: 691 LNHAMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLIESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKV EIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVPEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEEEPLENGDSNYXXXXXXXXXXXX 240
KA ETRNVYPPAEQYI+HADKSHVTLVEAFRNMQIEEEEPLENGDSN+
Sbjct: 811 KAAETRNVYPPAEQYINHADKSHVTLVEAFRNMQIEEEEPLENGDSNH-------ELTEQ 863
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA 298
AVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA
Sbjct: 864 NEEHYTEEEHYTEEQNGEEGSQEEAVVVDAESTDGAVLVNGNEADEEWGTNNEGAPSA 921
>Medtr2g102277.4 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056312 | 20130731
Length = 917
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/288 (79%), Positives = 234/288 (81%), Gaps = 7/288 (2%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLGRLEVAK IAIEVQSESKWKQLGELAMS+GKL+MAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
L HA D DAEGIS LATLAKEQGKNNVAFLCLFMLGKLEDCLQLL+ESN
Sbjct: 691 LNHAMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLIESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKV EIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVPEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEEEPLENGDSNYXXXXXXXXXXXX 240
KA ETRNVYPPAEQYI+HADKSHVTLVEAFRNMQIEEEEPLENGDSN+
Sbjct: 811 KAAETRNVYPPAEQYINHADKSHVTLVEAFRNMQIEEEEPLENGDSNH-------ELTEQ 863
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEW 288
AVVVDAESTDGAVLVNGNEADEEW
Sbjct: 864 NEEHYTEEEHYTEEQNGEEGSQEEAVVVDAESTDGAVLVNGNEADEEW 911
>Medtr2g102277.1 | coatomer subunit beta-like protein | HC |
chr2:44045802-44056791 | 20130731
Length = 917
Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust.
Identities = 229/288 (79%), Positives = 234/288 (81%), Gaps = 7/288 (2%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDPDYRFDLAIQLGRLEVAK IAIEVQSESKWKQLGELAMS+GKL+MAEEC
Sbjct: 631 MIEDALEVATDPDYRFDLAIQLGRLEVAKGIAIEVQSESKWKQLGELAMSSGKLQMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
L HA D DAEGIS LATLAKEQGKNNVAFLCLFMLGKLEDCLQLL+ESN
Sbjct: 691 LNHAMDLSGLLLLYSSFGDAEGISKLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLIESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKV EIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVPEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEEEEPLENGDSNYXXXXXXXXXXXX 240
KA ETRNVYPPAEQYI+HADKSHVTLVEAFRNMQIEEEEPLENGDSN+
Sbjct: 811 KAAETRNVYPPAEQYINHADKSHVTLVEAFRNMQIEEEEPLENGDSNH-------ELTEQ 863
Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEW 288
AVVVDAESTDGAVLVNGNEADEEW
Sbjct: 864 NEEHYTEEEHYTEEQNGEEGSQEEAVVVDAESTDGAVLVNGNEADEEW 911
>Medtr4g011950.1 | coatomer subunit beta-like protein | HC |
chr4:3146350-3132249 | 20130731
Length = 931
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/300 (72%), Positives = 234/300 (78%), Gaps = 5/300 (1%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDALEVATDP+YRFDLAIQLGRLEVAK IA+EV+SESKWKQLGELAMSTG EMAEEC
Sbjct: 631 MIEDALEVATDPEYRFDLAIQLGRLEVAKDIAVEVKSESKWKQLGELAMSTGNFEMAEEC 690
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
LKHA D DAEGIS LATLAKEQGKNNVA+LCLFMLGKLEDCLQLLVESN
Sbjct: 691 LKHAMDLSGLLLLYSSIGDAEGISKLATLAKEQGKNNVAYLCLFMLGKLEDCLQLLVESN 750
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALAVES 180
RIPEAALMARSYLPSKVSEIVAIWRKDL+KVNPKAAESLADPEEYPNLF+DWQVALAVES
Sbjct: 751 RIPEAALMARSYLPSKVSEIVAIWRKDLSKVNPKAAESLADPEEYPNLFDDWQVALAVES 810
Query: 181 KAIETRNVYPPAEQYISHADKSHVTLVEAFRNMQIEE-EEPLENGDSNYXXXXXX----X 235
KA ETR VY PAE+YI+HA KSHVTLV+AFRNMQIEE ++PLENGDSN+
Sbjct: 811 KAAETRGVYHPAEEYINHAGKSHVTLVDAFRNMQIEEGDQPLENGDSNHELTEHNGEEDY 870
Query: 236 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVVDAESTDGAVLVNGNEADEEWGTNNEGA 295
AVVVDA+S+DG VL+NGNEADEE TN EG+
Sbjct: 871 TEGHEEQNGEEDYTEEQEEQNGEEGSQDDAVVVDADSSDGTVLINGNEADEELSTNKEGS 930
>Medtr4g006350.1 | coatomer WD associated domain protein | LC |
chr4:602087-608877 | 20130731
Length = 900
Score = 244 bits (624), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 155/225 (68%), Gaps = 8/225 (3%)
Query: 1 MIEDALEVATDPDYRFDLAIQLGRLEVAKSIAIEVQSESKWKQLGELAMSTGKLEMAEEC 60
MIEDAL +ATDP+YRF LAIQ GRLEVAK +A+E++S SKWKQLGELAMS GKLEMAEEC
Sbjct: 314 MIEDALNLATDPEYRFGLAIQHGRLEVAKDVALELKSISKWKQLGELAMSNGKLEMAEEC 373
Query: 61 LKHAKDXXXXXXXXXXXXDAEGISNLATLAKEQGKNNVAFLCLFMLGKLEDCLQLLVESN 120
L+HA D D G+S LATLAKE GKN+ AFLCLFMLGK EDC QLL ESN
Sbjct: 374 LEHAMDFHGLLLLHSSTVDIRGMSKLATLAKEHGKNDFAFLCLFMLGKREDCRQLLEESN 433
Query: 121 RIPEAALMARSYLPSKVSEIVAIWRKDLNKVNPKAAESLADPEEYPNLFEDWQVALA--- 177
+ PEA LM RSYLPSKVSE++ WRKDL+KVNPK A SLA+PEEY +L E WQVA A
Sbjct: 434 QNPEAILMGRSYLPSKVSELLEKWRKDLSKVNPKHAYSLANPEEYTDLCEYWQVASAPAL 493
Query: 178 VESKAIETRNVYPPAEQYISHADK-----SHVTLVEAFRNMQIEE 217
V IE Y P ++ + +++ E F +E+
Sbjct: 494 VPLNLIEEIFFYLPVRSVLNVVSRLNRYFNYIIRTEHFVQKHLEK 538
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 26/30 (86%)
Query: 265 AVVVDAESTDGAVLVNGNEADEEWGTNNEG 294
AVVVDA+STDG VLVNGNEAD+E TN EG
Sbjct: 906 AVVVDADSTDGTVLVNGNEADKELSTNKEG 935