Miyakogusa Predicted Gene

Lj0g3v0245729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0245729.1 Non Characterized Hit- tr|I1IST8|I1IST8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,28.88,5e-18,FAMILY NOT NAMED,NULL; coiled-coil,NULL,CUFF.16065.1
         (420 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein...   724   0.0  
Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein...   723   0.0  
Medtr6g093150.2 | microtubule-associated TORTIFOLIA-like protein...    91   2e-18
Medtr6g093150.1 | microtubule-associated TORTIFOLIA-like protein...    91   2e-18
Medtr4g107110.1 | microtubule-associated TORTIFOLIA-like protein...    66   7e-11
Medtr5g036950.1 | microtubule-associated TORTIFOLIA-like protein...    61   3e-09

>Medtr3g050060.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717288 | 20130731
          Length = 924

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/421 (82%), Positives = 379/421 (90%), Gaps = 8/421 (1%)

Query: 2   KANDTDDRIENDQ--SSANLAGFSKTDGQSEVSFSNNRGNWVAIQRQLMQMERQQVHLMN 59
           K NDT DR ENDQ   SAN+AGFS+ DGQSEV FSNNRGN +AIQRQL Q+ERQQ HLMN
Sbjct: 510 KTNDTIDRSENDQRDGSANIAGFSRADGQSEVPFSNNRGNLLAIQRQLTQLERQQGHLMN 569

Query: 60  MLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGNNFTGFEGSSSRPSSKYN 119
           MLQDFMGGSHDSMVTLENRVRGLERIVEDM +DLSISSGRR      FEGSS RPSSKYN
Sbjct: 570 MLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGRR------FEGSSGRPSSKYN 623

Query: 120 GFNDYSSAKYGRGGDGRIQFGERFAQSDGNALGMRGRGPSWRSDMSDGWDFSGYGASRNG 179
           GFN+YS++KYGRGGDGRI F ERF Q+DGNALGMRGRGPSWRSDM +GWDF GYGASRNG
Sbjct: 624 GFNEYSNSKYGRGGDGRIPFNERFTQTDGNALGMRGRGPSWRSDMPEGWDFPGYGASRNG 683

Query: 180 QISSRRAFTGSSADGRSPKSAHESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEAT 239
           QISSRRAF GSS DGRSPKS HESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEAT
Sbjct: 684 QISSRRAFGGSSVDGRSPKSVHESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEAT 743

Query: 240 LEAIRIAGEDNGTSRATRVAIPEMTAEAMTDDNVGKDREAIWTSWSNAMDALQAGDVDSA 299
           LEAIR+AGEDNGTSRATRVA+PEMTAEAM DD+VG++R+AIWTSWSNA DALQAGD+DSA
Sbjct: 744 LEAIRVAGEDNGTSRATRVAVPEMTAEAMADDSVGQERDAIWTSWSNAFDALQAGDIDSA 803

Query: 300 FAEVSSTGDDLLLLKLMDRTGPVIDQLSNEVACEVLYTIGQFLLEPNLYGICLSWIQQLL 359
           FAEV STGDD LL+KLMDRTGPVI++LS+E+ACE+LY I QFLLE +L+ ICLSWIQQL+
Sbjct: 804 FAEVLSTGDDRLLVKLMDRTGPVINELSSEIACEILYAISQFLLEQDLFNICLSWIQQLV 863

Query: 360 EIVLENGPDTFGVSLEVKKDLLLNLHEASTDTTEDWEGVPPHQLLLQLASAWEIDLQQHD 419
           E++ ENGPDTFGV +EVK+DLL NLH+ASTDT E WEGVPP QLLLQLAS WEIDLQQHD
Sbjct: 864 EVLFENGPDTFGVPMEVKEDLLRNLHDASTDTAEGWEGVPPDQLLLQLASGWEIDLQQHD 923

Query: 420 K 420
           K
Sbjct: 924 K 924


>Medtr3g050060.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr3:19709809-19717265 | 20130731
          Length = 913

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/421 (82%), Positives = 379/421 (90%), Gaps = 8/421 (1%)

Query: 2   KANDTDDRIENDQ--SSANLAGFSKTDGQSEVSFSNNRGNWVAIQRQLMQMERQQVHLMN 59
           K NDT DR ENDQ   SAN+AGFS+ DGQSEV FSNNRGN +AIQRQL Q+ERQQ HLMN
Sbjct: 499 KTNDTIDRSENDQRDGSANIAGFSRADGQSEVPFSNNRGNLLAIQRQLTQLERQQGHLMN 558

Query: 60  MLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGNNFTGFEGSSSRPSSKYN 119
           MLQDFMGGSHDSMVTLENRVRGLERIVEDM +DLSISSGRR      FEGSS RPSSKYN
Sbjct: 559 MLQDFMGGSHDSMVTLENRVRGLERIVEDMLQDLSISSGRR------FEGSSGRPSSKYN 612

Query: 120 GFNDYSSAKYGRGGDGRIQFGERFAQSDGNALGMRGRGPSWRSDMSDGWDFSGYGASRNG 179
           GFN+YS++KYGRGGDGRI F ERF Q+DGNALGMRGRGPSWRSDM +GWDF GYGASRNG
Sbjct: 613 GFNEYSNSKYGRGGDGRIPFNERFTQTDGNALGMRGRGPSWRSDMPEGWDFPGYGASRNG 672

Query: 180 QISSRRAFTGSSADGRSPKSAHESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEAT 239
           QISSRRAF GSS DGRSPKS HESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEAT
Sbjct: 673 QISSRRAFGGSSVDGRSPKSVHESDQGGSRRAWEKAAMPIRLGEGPSARSVWQASKDEAT 732

Query: 240 LEAIRIAGEDNGTSRATRVAIPEMTAEAMTDDNVGKDREAIWTSWSNAMDALQAGDVDSA 299
           LEAIR+AGEDNGTSRATRVA+PEMTAEAM DD+VG++R+AIWTSWSNA DALQAGD+DSA
Sbjct: 733 LEAIRVAGEDNGTSRATRVAVPEMTAEAMADDSVGQERDAIWTSWSNAFDALQAGDIDSA 792

Query: 300 FAEVSSTGDDLLLLKLMDRTGPVIDQLSNEVACEVLYTIGQFLLEPNLYGICLSWIQQLL 359
           FAEV STGDD LL+KLMDRTGPVI++LS+E+ACE+LY I QFLLE +L+ ICLSWIQQL+
Sbjct: 793 FAEVLSTGDDRLLVKLMDRTGPVINELSSEIACEILYAISQFLLEQDLFNICLSWIQQLV 852

Query: 360 EIVLENGPDTFGVSLEVKKDLLLNLHEASTDTTEDWEGVPPHQLLLQLASAWEIDLQQHD 419
           E++ ENGPDTFGV +EVK+DLL NLH+ASTDT E WEGVPP QLLLQLAS WEIDLQQHD
Sbjct: 853 EVLFENGPDTFGVPMEVKEDLLRNLHDASTDTAEGWEGVPPDQLLLQLASGWEIDLQQHD 912

Query: 420 K 420
           K
Sbjct: 913 K 913


>Medtr6g093150.2 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr6:35169715-35173662 | 20130731
          Length = 659

 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 77/355 (21%)

Query: 42  AIQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRG 101
            I+ QL  +E +Q ++M+ LQ F  G  D++ T+++R+ GLE +V+ +            
Sbjct: 342 CIRNQLSDIEIKQENMMHQLQIFTTGIMDALSTIQSRMLGLENVVDRL------------ 389

Query: 102 NNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRIQFGE--RFAQSDGNALGMRGRGPS 159
                     SR S K                 GR  F E  +F +   N    R    +
Sbjct: 390 ----------SRESLK----------------GGRHSFSENSKFVRQSQNVASPRISVCT 423

Query: 160 WRSDMSDGWDFSGYGASRNGQISSRRAFTGSSADGRSPKSAHESDQGGSRRAWE-KAAMP 218
            +         SG    ++ +   +R+F+      RS    H  D     ++++ K A  
Sbjct: 424 PKPSSESSTKQSGLFLVKSSESLEKRSFS------RSQPRIHAGDSVDMCKSYKVKTAPK 477

Query: 219 IR------LGEGPSARSVWQASKDEATLEAIRIAGEDNGTSRATRVAIPEMTAEAMTDDN 272
           +R      LGE   +    Q  K+ +   +       NG         PE      ++ N
Sbjct: 478 VREDNLNSLGEDRQSTCSAQVRKNGSIFSSAAKTNARNGC--------PE------SNTN 523

Query: 273 VGKDREAIWTSWSNAMDALQAGDVDSAFAEVSSTGDDLLLLKLMDRTGPVIDQLSNEVAC 332
                      W      +  GD++SA+ E   +GD+L+L++L+++TGPVI+ LS +   
Sbjct: 524 Y----------WKCVNRLVCEGDLNSAYMEALCSGDELILIELLNKTGPVIESLSGKTVN 573

Query: 333 EVLYTIGQFLLEPNLYGICLSWIQQLLEIVLENGPDTFGVSLEVKKDLLLNLHEA 387
            +L T+  +LLE   +   + W+QQ++E+   +GP+   +S+EV++ LL  + E 
Sbjct: 574 VLLSTLAPYLLEGKFFNTIIPWLQQVVEMSTVHGPNCIALSIEVEEQLLYAIQEV 628


>Medtr6g093150.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr6:35169731-35173672 | 20130731
          Length = 816

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 152/361 (42%), Gaps = 78/361 (21%)

Query: 37  RGN-WVAIQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSI 95
           R N    I+ QL  +E +Q ++M+ LQ F  G  D++ T+++R+ GLE +V+ +      
Sbjct: 493 RANEMTCIRNQLSDIEIKQENMMHQLQIFTTGIMDALSTIQSRMLGLENVVDRL------ 546

Query: 96  SSGRRGNNFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRIQFGE--RFAQSDGNALGM 153
                           SR S K                 GR  F E  +F +   N    
Sbjct: 547 ----------------SRESLK----------------GGRHSFSENSKFVRQSQNVASP 574

Query: 154 RGRGPSWRSDMSDGWDFSGYGASRNGQISSRRAFTGSSADGRSPKSAHESDQGGSRRAWE 213
           R    + +         SG    ++ +   +R+F+      RS    H  D     ++++
Sbjct: 575 RISVCTPKPSSESSTKQSGLFLVKSSESLEKRSFS------RSQPRIHAGDSVDMCKSYK 628

Query: 214 -KAAMPIR------LGEGPSARSVWQASKDEATLEAIRIAGEDNGTSRATRVAIPEMTAE 266
            K A  +R      LGE   +    Q  K+ +   +       NG         PE    
Sbjct: 629 VKTAPKVREDNLNSLGEDRQSTCSAQVRKNGSIFSSAAKTNARNGC--------PE---- 676

Query: 267 AMTDDNVGKDREAIWTSWSNAMDALQAGDVDSAFAEVSSTGDDLLLLKLMDRTGPVIDQL 326
             ++ N           W      +  GD++SA+ E   +GD+L+L++L+++TGPVI+ L
Sbjct: 677 --SNTNY----------WKCVNRLVCEGDLNSAYMEALCSGDELILIELLNKTGPVIESL 724

Query: 327 SNEVACEVLYTIGQFLLEPNLYGICLSWIQQLLEIVLENGPDTFGVSLEVKKDLLLNLHE 386
           S +    +L T+  +LLE   +   + W+QQ++E+   +GP+   +S+EV++ LL  + E
Sbjct: 725 SGKTVNVLLSTLAPYLLEGKFFNTIIPWLQQVVEMSTVHGPNCIALSIEVEEQLLYAIQE 784

Query: 387 A 387
            
Sbjct: 785 V 785


>Medtr4g107110.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr4:44240560-44242921 | 20130731
          Length = 602

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 9/103 (8%)

Query: 43  IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGN 102
           I+ QL Q+E+QQ  L+++LQ F+G S + M +LE RV GLE  ++D+S DL++S+GR  N
Sbjct: 458 IRNQLQQIEKQQSSLLDLLQKFIGSSQNGMRSLETRVHGLELALDDISYDLAVSNGRMTN 517

Query: 103 NFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGRI---QFGER 142
           +          P +      D+ S+K+ R   G+    QF  R
Sbjct: 518 SNVPRNSCCLLPGA------DFLSSKFWRKTQGQYSSPQFSRR 554


>Medtr5g036950.1 | microtubule-associated TORTIFOLIA-like protein |
           HC | chr5:16127767-16132301 | 20130731
          Length = 750

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 56/94 (59%), Gaps = 6/94 (6%)

Query: 43  IQRQLMQMERQQVHLMNMLQDFMGGSHDSMVTLENRVRGLERIVEDMSRDLSISSGRRGN 102
           I+ QL+Q+E QQ +L+++LQ F+G S + M  LE RV GLE  ++++S DL++SSGR  N
Sbjct: 485 IRDQLVQIENQQSNLLDLLQRFIGTSQNGMNLLETRVYGLEMALDEISYDLAVSSGRIPN 544

Query: 103 NFTGFEGSSSRPSSKYNGFNDYSSAKYGRGGDGR 136
                +     P +      D+ S+K+ +  D R
Sbjct: 545 TDAIDDMCCKLPGT------DFLSSKFWKKTDSR 572