Miyakogusa Predicted Gene

Lj0g3v0245719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0245719.1 Non Characterized Hit- tr|J3M0P0|J3M0P0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,30.71,3e-18,seg,NULL; DUF1191,Protein of unknown function
DUF1191,CUFF.16060.1
         (271 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g074120.1 | plant/F17O14-7 protein | HC | chr7:27687458-27...   308   5e-84
Medtr3g062840.1 | plant/F17O14-7 protein | HC | chr3:28400981-28...   207   1e-53
Medtr5g075750.1 | plant/F17O14-7 protein | LC | chr5:32231880-32...   201   5e-52
Medtr8g461170.1 | plant/F17O14-7 protein | HC | chr8:21471380-21...   169   2e-42
Medtr8g028165.1 | plant/F17O14-7 protein | HC | chr8:10504807-10...   111   8e-25
Medtr3g010800.1 | transmembrane protein, putative | HC | chr3:25...    78   1e-14

>Medtr7g074120.1 | plant/F17O14-7 protein | HC |
           chr7:27687458-27685110 | 20130731
          Length = 315

 Score =  308 bits (788), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 165/265 (62%), Positives = 187/265 (70%), Gaps = 1/265 (0%)

Query: 7   ASPKTGTVYDGTQLLPSNLTGVKVAAXXXXXXXXXXYGVAVYNEFQIPEGIIVSPYVKRI 66
           A+PKTGTVY+ TQL PSNLTGVKVAA           G  +YNEF+IP G+IVSPYV+R+
Sbjct: 52  ANPKTGTVYNATQL-PSNLTGVKVAALRLRSGSLRRKGFDMYNEFEIPNGLIVSPYVERL 110

Query: 67  VLVYQNLGKLSTRYYPLPNYTYLAPVLGLLAYDASDLSATGLPELHITASRDPVKVKFQD 126
           V VYQNLGKLS +YYPLPNYTYLAPVLGLLAYDA++LSAT L EL + AS D + VKFQD
Sbjct: 111 VFVYQNLGKLSNKYYPLPNYTYLAPVLGLLAYDAANLSATNLSELDVNASGDNILVKFQD 170

Query: 127 VKAAPHGAVAKCVWFDLQGSSNFSNVTGGDTCSTSRQGHYSIVVEXXXXXXXXXXXXXXX 186
           VK+ PHG VAKCVWFDLQGSSNFSNV GG+TCSTS+QGH+SIVV+               
Sbjct: 171 VKSVPHGTVAKCVWFDLQGSSNFSNVKGGNTCSTSQQGHFSIVVKSNGAPGPVSPTPHNH 230

Query: 187 XKKESKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXKYMRNKKIQQMERSADMGEALHMA 246
            K E KS+KK                          KY + KK+Q MER+AD GE L MA
Sbjct: 231 GKGEKKSSKKVWIIVGSVVGGLLLLVLLSFLVLCINKYKQKKKMQGMERAADSGETLQMA 290

Query: 247 SVGDTKAPAATVTRTQPTLEHEYAP 271
           SVG+TKAPAATVTRTQPTLEHEYAP
Sbjct: 291 SVGETKAPAATVTRTQPTLEHEYAP 315


>Medtr3g062840.1 | plant/F17O14-7 protein | HC |
           chr3:28400981-28399252 | 20130731
          Length = 311

 Score =  207 bits (526), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/264 (44%), Positives = 146/264 (55%), Gaps = 6/264 (2%)

Query: 9   PKTGTVYDGTQLLPSNLTGVKVAAXXXXXXXXXXYGVAVYNEFQIPEGIIVSPYVKRIVL 68
           PKTG  YD    LP+++ GVKV+            GV  Y EFQIP G++  PYV+R+VL
Sbjct: 53  PKTGVPYDAK--LPNSIIGVKVSTLRLRSGSLRTRGVQ-YKEFQIPPGVVEQPYVERLVL 109

Query: 69  VYQNLGKLSTRYYPLPNYTYLAPVLGLLAYDASDLSATGLPELHITASRDPVKVKFQDVK 128
           VY NLG LS  +YPLP YTYLAPVLGLL+Y   DL A  LPEL + AS  P+ VKF  VK
Sbjct: 110 VYHNLGNLSEHFYPLPGYTYLAPVLGLLSYSGVDLFANELPELDVRASDKPILVKFLKVK 169

Query: 129 AAPHGAVAKCVWFDLQGSSNFSNVTGGDTCSTSRQGHYSIVVEXXXXXXXXXXXXXXXXK 188
           +AP+G+V KCV+FDL GS  F  +   + CST  QGH+SIVVE                K
Sbjct: 170 SAPYGSVPKCVYFDLHGSVQFDILLPDNVCSTMEQGHFSIVVESNAPTPAPAAVAAAVGK 229

Query: 189 -KESKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXKYMRNKKIQQMERSADMGEALHMAS 247
               KSN                            K  +  KIQ++E +AD  E L M S
Sbjct: 230 GGRRKSNVWIIVGSVVGGCILLIMLSLLVVRLVRIK--KGMKIQELEWTADSHETLQMKS 287

Query: 248 VGDTKAPAATVTRTQPTLEHEYAP 271
           +G TKAP A  TRT+PT+E++Y P
Sbjct: 288 IGGTKAPLAIGTRTRPTIENDYIP 311


>Medtr5g075750.1 | plant/F17O14-7 protein | LC |
           chr5:32231880-32230972 | 20130731
          Length = 302

 Score =  201 bits (511), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 146/267 (54%), Gaps = 14/267 (5%)

Query: 6   WASPKTGTVYDGTQLLPSNLTGVKVAAXXXXXXXXXXYGVAVYNEFQIPEGIIVSPYVKR 65
           +++PKTG  YD    +PSNLTG+KV+A           GV  Y EF+IPEG+I  PY KR
Sbjct: 49  FSTPKTGVPYDAQ--VPSNLTGIKVSAMRLRSGSLWDKGVQSYKEFEIPEGVIEQPYFKR 106

Query: 66  IVLVYQNLGKLSTRYYPLPNYTYLAPVLGLLAYDASDLSATGLPELHITASRDPVKVKFQ 125
           IVLVYQNLG  S  YYPL  Y+YLAPVLGLLAYD ++L A+ LPEL ++A   P+ V F 
Sbjct: 107 IVLVYQNLGNWSQYYYPLSGYSYLAPVLGLLAYDGTNLIASNLPELELSAYHKPILVNFS 166

Query: 126 DVK-AAPHGAVAKCVWFDLQGSSNFSNVTGGDTCSTSRQGHYSIVVEXXXXXXXXXXXXX 184
            VK  +P+G++AKCV+FDL GS  F  +  G+ C    QGH SIVVE             
Sbjct: 167 YVKNTSPYGSLAKCVYFDLFGSIKFDTLLNGNVCPIFEQGHVSIVVE-----------SN 215

Query: 185 XXXKKESKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXKYMRNKKIQQMERSADMGEALH 244
              +   K+  K                          +  +  KI+QME  AD  E L 
Sbjct: 216 ASPQTHWKNEFKFKIVIVCLAGGIVLLFLFGLLISRMRRAKQETKIKQMELEADCSETLK 275

Query: 245 MASVGDTKAPAATVTRTQPTLEHEYAP 271
           +  +G+ K P+A  TRT P +E++Y P
Sbjct: 276 IIYIGNAKVPSALGTRTPPKIENDYVP 302


>Medtr8g461170.1 | plant/F17O14-7 protein | HC |
           chr8:21471380-21470496 | 20130731
          Length = 294

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 130/261 (49%), Gaps = 19/261 (7%)

Query: 10  KTGTVYDGTQLLPSNLTGVKVAAXXXXXXXXXXYGVAVYNEFQIPEGIIVSPYVKRIVLV 69
           KTG  YD    +P+NLTG+KV+A            V  Y EFQIP G+I  PYV+R+V+V
Sbjct: 48  KTGFPYDAD--VPNNLTGIKVSALRLRSGSLRTRSVQSYKEFQIPPGVIEQPYVERLVMV 105

Query: 70  YQNLGKLSTRYYPLP-NYTYLAPVLGLLAYDASDLSATGLPELHITASRD-PVKVKFQDV 127
           Y NL   S  +YPLP  Y+YLAPVLGLL Y   +L+A+ LPEL I  S D P+ + F DV
Sbjct: 106 YHNLANWSENFYPLPLGYSYLAPVLGLLTYRGVNLNASELPELDIKVSDDKPILITFHDV 165

Query: 128 KAAPHGAVAKCVWFDLQGSSNFSNVTGGDTCSTSRQGHYSIVVEXXXXXXXXXXXXXXXX 187
           K AP+G+V  CV+FDL GS  F  +  G+ CST +QGH+SIVV                 
Sbjct: 166 KPAPYGSVPMCVYFDLHGSVTFDILLPGNVCSTVQQGHFSIVVASADI------------ 213

Query: 188 KKESKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXKYMRNKKIQQMERSADMGEALHMAS 247
               K                              +  R KK Q++E  +D GEAL +  
Sbjct: 214 ---GKKKNTNVWMIVAWSLFVGCILLILLSILLFVRLRRMKKNQELELESDNGEALRITH 270

Query: 248 VGDTKAPAATVTRTQPTLEHE 268
           V  T  P A   RT   +  E
Sbjct: 271 VAGTILPVAGAIRTTTGMPME 291


>Medtr8g028165.1 | plant/F17O14-7 protein | HC |
           chr8:10504807-10503031 | 20130731
          Length = 295

 Score =  111 bits (277), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 15/263 (5%)

Query: 7   ASPKTGTVYDGTQLLPSNLTGVKVAAXXXXXXXXXXYGVAVYNEFQIPEGIIVSPYVKRI 66
            +PKTG  Y+ +  LPSN TG++V             GV   + F +P  ++  P  KR+
Sbjct: 47  VNPKTGVFYNIS--LPSNYTGMEVRVVRLRTSSFYKRGVNS-SFFNVPPHVVPQPIRKRM 103

Query: 67  VLVYQNLGKLSTRYYPLPNYTYLAPVLGLLAYDASDLSATGLPELHITASR-DPVKVKFQ 125
            ++Y+N G  S+ Y+ +PNYT +APV G +AY +S  S     ++++  ++ +P+ + F 
Sbjct: 104 AILYENFGNWSSHYFNVPNYTMVAPVFGFVAYTSSGNSFMDNEKMNLVITQGNPILIHFH 163

Query: 126 DVKAAPHGAVAKCVWFDLQGSSNFSNVTGGDTCSTSRQGHYSIVVEXXXXXXXXXXXXXX 185
            V+         CV F   G+  F+N+T    C T   GHY++VV               
Sbjct: 164 HVRLHEKNDTPICVKFSDSGNLEFNNMTKPYVCETYGTGHYTLVVP---------IPKEL 214

Query: 186 XXKKESKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXKYMRNKKIQQMERSADMGEALHM 245
             K++SK  +                           K  +  +I+++ER+++ GE+   
Sbjct: 215 YNKRQSK--RFTIWWILGFVLGFVGLVVLILLLVTLVKAAKKTRIKKLERNSENGESFDT 272

Query: 246 ASVGDTKAPAATVTRTQPTLEHE 268
             +G+TK P A   RTQP LE++
Sbjct: 273 FWIGETKLPLAPTIRTQPVLEND 295


>Medtr3g010800.1 | transmembrane protein, putative | HC |
           chr3:2596934-2595467 | 20130731
          Length = 325

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 24/267 (8%)

Query: 21  LPSNLTGVKVAAXXXXXXXXXXYGVAVYNEFQIPEGIIVSPYVKRIVLVYQNL---GKLS 77
           LPSNL+G+KV            YG A   EF +  G+ + P ++R++L+ Q++      S
Sbjct: 59  LPSNLSGIKVDTVRFRCGSLTRYG-AKLKEFHLGIGVSIHPCIERVMLIRQSIEYNNNWS 117

Query: 78  TRYYP----LPNYTYLAPVLGLLAYDA-SDLSATGLP-ELHITASRDPVKVKFQDV---- 127
           + YY     L  Y  ++P++G+LAY+A  D +++  P +L I A    + + F +     
Sbjct: 118 SIYYANYNDLSKYQLVSPIVGILAYNADEDSNSSSNPFQLGIEAGEKLITIDFNNATNFN 177

Query: 128 KAAPHGAVAK--CVWFDLQGSSNFSNVT--GGDTCSTSRQGHYSIVVEXXXXXXXXXXXX 183
                G   K  CV F+  G    +       + C     GH+ +VVE            
Sbjct: 178 NQEEKGIKVKPLCVSFEGNGKMTLAITKPLATNVCVAKTHGHFGLVVE-----SESLQHQ 232

Query: 184 XXXXKKESKSNKKXXXXXXXXXXXXXXXXXXXXXXXXXXKYMRNKKIQQMERSADMGEAL 243
               KK  + ++                           +  +  ++ QMER A   EAL
Sbjct: 233 DDEYKKPIRLSQWKIAVGSTIGAALGAFLLGLLFVAMVVRVKKRSRMVQMERRAYEEEAL 292

Query: 244 HMASVGDTKAPAATVTRTQPTLE-HEY 269
            ++ VG  +AP A  TRT PTLE H+Y
Sbjct: 293 QVSMVGHVRAPTAPGTRTTPTLEQHDY 319