Miyakogusa Predicted Gene
- Lj0g3v0244709.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0244709.1 Non Characterized Hit- tr|I1JJ70|I1JJ70_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20540 PE,92.21,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAME,CUFF.15986.1
(154 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g092060.1 | Ras-related small GTP-binding family protein |... 291 2e-79
Medtr4g047870.2 | septum-promoting GTP-binding-like protein | HC... 255 1e-68
Medtr4g047870.1 | septum-promoting GTP-binding-like protein | HC... 255 1e-68
Medtr5g013900.1 | RAB GTPase-like protein B1C | HC | chr5:458101... 62 3e-10
Medtr3g064390.1 | small GTPase family RAB protein | HC | chr3:28... 62 3e-10
Medtr4g098950.1 | RAB GTPase-like protein B1C | HC | chr4:408810... 60 7e-10
Medtr1g062760.1 | RAB GTPase-like protein A5B | HC | chr1:274958... 60 8e-10
Medtr2g005510.1 | RAB GTPase-like protein A1D | HC | chr2:188783... 60 9e-10
Medtr5g076590.1 | small GTPase family RAB protein | HC | chr5:32... 59 1e-09
Medtr1g078200.1 | RAB GTPase-like protein C2B | HC | chr1:349987... 59 3e-09
Medtr4g064897.1 | RAB GTPase-like protein A1D | HC | chr4:242499... 58 4e-09
Medtr8g103550.1 | RAB GTPase-like protein A5B | HC | chr8:435755... 57 5e-09
Medtr3g086980.1 | RAB GTPase-like protein A1D | HC | chr3:394347... 57 6e-09
Medtr3g069510.1 | RAB GTPase-like protein A1D | HC | chr3:310902... 57 7e-09
Medtr2g083860.1 | RAB GTPase-like protein A1D | HC | chr2:351953... 55 3e-08
Medtr8g107070.1 | RAB GTPase-like protein A2D | HC | chr8:452338... 54 4e-08
Medtr8g089985.1 | RAB GTPase-like protein A1D | HC | chr8:376274... 54 5e-08
Medtr2g075950.1 | RAB GTPase-like protein A1D | HC | chr2:317892... 54 6e-08
Medtr7g103070.1 | RAB GTPase-like protein C2B | HC | chr7:414408... 54 6e-08
Medtr7g051940.1 | RAB GTPase-like protein A1D | HC | chr7:182342... 54 7e-08
Medtr3g087160.1 | RAB GTPase-like protein B1C | HC | chr3:395302... 54 7e-08
Medtr8g090215.1 | RAB GTPase-like protein B1C | HC | chr8:378544... 53 1e-07
Medtr1g052475.1 | RAB GTPase-like protein A1D | HC | chr1:213364... 53 1e-07
Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC | scaffold02... 52 1e-07
Medtr7g100020.2 | RAB GTPase-like protein A5B | HC | chr7:401949... 52 2e-07
Medtr7g100020.1 | RAB GTPase-like protein A5B | HC | chr7:401949... 52 2e-07
Medtr1g068730.1 | RAB GTPase-like protein A5B | HC | chr1:293444... 52 3e-07
Medtr1g115325.1 | RAB GTPase-like protein A5B | HC | chr1:520310... 52 3e-07
Medtr8g027220.1 | Ras-related small GTP-binding family protein |... 52 3e-07
Medtr7g117910.1 | small GTPase family RAB protein | HC | chr7:48... 52 3e-07
Medtr1g068740.1 | RAB GTPase-like protein A5B | HC | chr1:293521... 51 4e-07
Medtr7g103070.2 | RAB GTPase-like protein C2B | HC | chr7:414402... 51 4e-07
Medtr4g079350.1 | RAB GTPase-like protein C2B | HC | chr4:306486... 51 4e-07
Medtr7g405790.1 | RAB GTPase-like protein A1D | HC | chr7:264041... 51 4e-07
Medtr3g064390.2 | small GTPase family RAB protein | HC | chr3:28... 50 6e-07
Medtr2g005500.1 | RAB GTPase-like protein B1C | HC | chr2:184631... 49 1e-06
Medtr2g096550.1 | RAB GTPase-like protein A1D | HC | chr2:412383... 49 1e-06
Medtr2g090865.1 | RAB GTPase-like protein A1D | HC | chr2:390019... 49 1e-06
Medtr2g014990.1 | RAB GTPase-like protein A1D | HC | chr2:437551... 49 2e-06
Medtr8g031660.1 | RAB GTPase-like protein A5B | LC | chr8:119027... 49 2e-06
Medtr4g099470.1 | RAB GTPase-like protein A2D | HC | chr4:412983... 49 2e-06
Medtr4g088090.1 | RAB GTPase-like protein A1D | HC | chr4:346993... 48 3e-06
>Medtr5g092060.1 | Ras-related small GTP-binding family protein | HC
| chr5:40192617-40189315 | 20130731
Length = 289
Score = 291 bits (744), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/154 (89%), Positives = 145/154 (94%)
Query: 1 MEGLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSV 60
MEGLNLMDKTL VQGARISF IWDVAGDK S DQIPMACKD+VA+LIMFDLTSR TL++V
Sbjct: 136 MEGLNLMDKTLYVQGARISFCIWDVAGDKKSLDQIPMACKDAVALLIMFDLTSRSTLNNV 195
Query: 61 VRWYSEARKWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHN 120
V WYSEARKWNQ AIPILIGTKFDDFV+ PPDLQWTIVTQARAYARAMKATLFFSSATHN
Sbjct: 196 VGWYSEARKWNQTAIPILIGTKFDDFVRLPPDLQWTIVTQARAYARAMKATLFFSSATHN 255
Query: 121 INVNKIFKFIMAKLFNLPWTVERNLTLGEPIIDF 154
INVNKIFKFIMAKLFNLPWT+ERNL +GEPIIDF
Sbjct: 256 INVNKIFKFIMAKLFNLPWTIERNLKVGEPIIDF 289
>Medtr4g047870.2 | septum-promoting GTP-binding-like protein | HC |
chr4:16887358-16882915 | 20130731
Length = 276
Score = 255 bits (651), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/153 (76%), Positives = 134/153 (87%)
Query: 2 EGLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVV 61
+G N MDKTL V GARIS+ IW+V GD S DQ+PMACKDSVAILIMFDLTSRCTL+SV+
Sbjct: 124 KGPNQMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLTSRCTLNSVL 183
Query: 62 RWYSEARKWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
WY EARKWNQ AIP+LIGTKFDDF++ P D+QWTI ++AR YA+A+ ATLFFSSAT+NI
Sbjct: 184 GWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNI 243
Query: 122 NVNKIFKFIMAKLFNLPWTVERNLTLGEPIIDF 154
NVNKIFKFI AKLF+LPWTVERNL +GEPIIDF
Sbjct: 244 NVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 276
>Medtr4g047870.1 | septum-promoting GTP-binding-like protein | HC |
chr4:16887365-16882931 | 20130731
Length = 276
Score = 255 bits (651), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/153 (76%), Positives = 134/153 (87%)
Query: 2 EGLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVV 61
+G N MDKTL V GARIS+ IW+V GD S DQ+PMACKDSVAILIMFDLTSRCTL+SV+
Sbjct: 124 KGPNQMDKTLVVSGARISYCIWEVQGDGKSEDQLPMACKDSVAILIMFDLTSRCTLNSVL 183
Query: 62 RWYSEARKWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
WY EARKWNQ AIP+LIGTKFDDF++ P D+QWTI ++AR YA+A+ ATLFFSSAT+NI
Sbjct: 184 GWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNI 243
Query: 122 NVNKIFKFIMAKLFNLPWTVERNLTLGEPIIDF 154
NVNKIFKFI AKLF+LPWTVERNL +GEPIIDF
Sbjct: 244 NVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 276
>Medtr5g013900.1 | RAB GTPase-like protein B1C | HC |
chr5:4581017-4585541 | 20130731
Length = 207
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ + KT+ ++ + +WD AG + R IP +DS +I++D+ SR T + +
Sbjct: 43 GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTTK 102
Query: 63 WYSEAR-KWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + + I +L+G K D K + + A AR + +SA
Sbjct: 103 WIEEVRTERGSDVIIVLVGNKTDLVEK-----RQVSIEDGEAKARELNVMFIETSAKAGF 157
Query: 122 NVNKIFKFIMAKL 134
N+ +F+ I A L
Sbjct: 158 NIKALFRKIAAAL 170
>Medtr3g064390.1 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 200
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G +TL+V A + F IWD AG + PM + + A +I++D+TS + +
Sbjct: 44 GAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKK 103
Query: 63 WYSEARK-WNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFF--SSATH 119
W E +K N N + L G K D D + +AR YA + LFF +SA
Sbjct: 104 WVQELQKQGNPNMVMALAGNKSD-----LEDKRKVTAEEARVYAE--ENGLFFMETSAKS 156
Query: 120 NINVNKIFKFIMAKL 134
NVN +F I +L
Sbjct: 157 AANVNDVFYEIAKRL 171
>Medtr4g098950.1 | RAB GTPase-like protein B1C | HC |
chr4:40881047-40875458 | 20130731
Length = 206
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ + KT+ ++ + +WD AG + R IP +DS +I++D+ SR T + +
Sbjct: 43 GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSK 102
Query: 63 WYSEAR-KWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + + I +L+G K D K + + A +R + +SA
Sbjct: 103 WIEEVRSERGSDVIVVLVGNKTDLVEK-----RQVSTEEGEAKSRELNVMFIEASAKAGF 157
Query: 122 NVNKIFKFIMAKLFNLPWTVERNLTLGEPIID 153
N+ +F+ I A LP + T E ++D
Sbjct: 158 NIKALFRKIAAA---LPGMETLSTTKQEDMVD 186
>Medtr1g062760.1 | RAB GTPase-like protein A5B | HC |
chr1:27495849-27498608 | 20130731
Length = 211
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ K L+V G R+ +IWD AG + R + + I++++D+T R T ++
Sbjct: 47 GVDFKIKLLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSE 106
Query: 63 -WYSEARKW--NQNAIPILIGTKFDDFVKFPPDLQWTIVT-QARAYARAMKATLFFSSAT 118
W E + NQ+ + +L+G K D + + T+ T + A A+ + F SA
Sbjct: 107 VWSKEVELYSTNQDCMKMLVGNKVD------RESERTVSTEEGLALAKEFGCSFFECSAK 160
Query: 119 HNINVNKIFKFIMAKLFNLPWTVERNLT 146
NV+K F+ + K+ +P +E T
Sbjct: 161 TRENVDKCFEELALKIMEVPSLLEEGST 188
>Medtr2g005510.1 | RAB GTPase-like protein A1D | HC |
chr2:188783-187481 | 20130731
Length = 220
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 6/136 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +TL V+G + IWD AG + R + ++ L+++D+T T +V R
Sbjct: 49 GVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTR 108
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + N + +LIG K D L+ A++YA + +SA
Sbjct: 109 WLKELRDHADANIVIMLIGNKTD-----LKHLRAVATEDAQSYAEKEGLSFIETSALEAT 163
Query: 122 NVNKIFKFIMAKLFNL 137
NV K F+ + +++ +
Sbjct: 164 NVEKAFQTTLGEIYRI 179
>Medtr5g076590.1 | small GTPase family RAB protein | HC |
chr5:32675525-32681053 | 20130731
Length = 200
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G +TL+V A + F IWD AG + PM + + A +I++D+T+ + +
Sbjct: 44 GAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNLESFTRAKK 103
Query: 63 WYSEARK-WNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFF--SSATH 119
W E +K N N + G K D D + +AR YA + LFF +SA
Sbjct: 104 WVQELQKQGNPNMVVAFAGNKAD-----LEDKRKVTAEEARVYAE--ENGLFFIETSAKT 156
Query: 120 NINVNKIFKFIMAKL 134
NVN IF I KL
Sbjct: 157 AANVNDIFYEIAKKL 171
>Medtr1g078200.1 | RAB GTPase-like protein C2B | HC |
chr1:34998790-34993821 | 20130731
Length = 224
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ + + + G + IWD AG + R + +V L+++D++ R T S+ R
Sbjct: 48 GVEFQTQKMEINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGR 107
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W +E + N + IL+G K D D + T+ +A A A +SA +
Sbjct: 108 WLNELHTHSDMNVVTILVGNKSD-----LKDAREVPTTEGKALAEAQGLFFMETSALDSS 162
Query: 122 NVNKIFKFIMAKLFNL 137
NV F+ ++ +++N+
Sbjct: 163 NVVAAFQTVVKEIYNI 178
>Medtr4g064897.1 | RAB GTPase-like protein A1D | HC |
chr4:24249982-24247615 | 20130731
Length = 215
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +TL V+G + IWD AG + R + +V L+++D+T R T +V R
Sbjct: 46 GVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNR 105
Query: 63 WYSEARKWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFF--SSATHN 120
W E R + I I++ D V++ A A K L F +SA
Sbjct: 106 WLRELRDHADSNIVIMMAGNKSDLNHLRA------VSEDDGQALAEKEGLSFLETSALEA 159
Query: 121 INVNKIFKFIMAKLFNL 137
N+ K F+ I+ +++++
Sbjct: 160 TNIEKAFQTILTEIYHI 176
>Medtr8g103550.1 | RAB GTPase-like protein A5B | HC |
chr8:43575571-43573270 | 20130731
Length = 198
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G + LS+ A + F IWD AG + PM + S A ++++D+TS + +
Sbjct: 43 GAAFFTQVLSLNEATVKFDIWDTAGQERYHSLAPMYYRGSAAAIVVYDITSMDSFVRAKK 102
Query: 63 WYSEA-RKWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R+ N N I +L+ K D D + + YA+ + F +SA
Sbjct: 103 WVREVQRQANPNLIMLLVANKAD-----LEDQRKVGNEEGEEYAKENGMSFFETSAKTAQ 157
Query: 122 NVNKIFKFIMAKL 134
NVN++F I +L
Sbjct: 158 NVNELFYEIAKRL 170
>Medtr3g086980.1 | RAB GTPase-like protein A1D | HC |
chr3:39434756-39431186 | 20130731
Length = 222
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +TL ++ + IWD AG + R + +V ++++D+T R + + R
Sbjct: 50 GVEFQTRTLVIEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPR 109
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQ-ARAYARAMKATLFF--SSAT 118
W E R ++N + ILIG K D + Q + T+ A+ +A K LFF +SA
Sbjct: 110 WLEELRNHADKNIVIILIGNKSD------LEEQRAVPTEDAKEFAE--KEGLFFLETSAL 161
Query: 119 HNINVNKIFKFIMAKLFNL 137
NV F ++ ++FN+
Sbjct: 162 QATNVETAFMTVLTEIFNI 180
>Medtr3g069510.1 | RAB GTPase-like protein A1D | HC |
chr3:31090285-31088261 | 20130731
Length = 216
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +T+ V+G + IWD AG + R + +V L+++D+T R T +V R
Sbjct: 46 GVEFATRTIQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQR 105
Query: 63 WYSEARKWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFF--SSATHN 120
W E R + I I++ D V+ A A K TL F +SA
Sbjct: 106 WLRELRDHADSNIVIMLAGNKSDLNHLRA------VSSDDAQNLAEKETLSFLETSALEA 159
Query: 121 INVNKIFKFIMAKLFNL 137
+NV K F+ I+ ++ +
Sbjct: 160 LNVEKAFQTILFDIYQI 176
>Medtr2g083860.1 | RAB GTPase-like protein A1D | HC |
chr2:35195372-35201445 | 20130731
Length = 218
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ K+L+V I IWD AG + R + +V L+++D+T R T + R
Sbjct: 47 GVEFATKSLTVDAKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAAR 106
Query: 63 WYSEARKWNQ-NAIPILIGTKFD--DFVKFPPDLQWTIVTQARAYARAMKATLFF--SSA 117
W E R N + +LIG K D V P + +++A + +L+F +SA
Sbjct: 107 WLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTE-------DGKSFAE--RESLYFMETSA 157
Query: 118 THNINVNKIFKFIMAKLFNL 137
NV F ++++++ +
Sbjct: 158 LEATNVENAFTEVLSQIYRI 177
>Medtr8g107070.1 | RAB GTPase-like protein A2D | HC |
chr8:45233889-45231298 | 20130731
Length = 265
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 8/144 (5%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ + + V+ I IWD AG + R + ++ L+++D+T R + SV R
Sbjct: 48 GVEFAYRNIKVRDKLIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGR 107
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R++ + + IL+G K D + + +A+ +A A +SA N+
Sbjct: 108 WLVELREFGGEEMVVILVGNKCD-----LGESREVEEEEAKRFAEAEGLCFMETSALKNL 162
Query: 122 NVNKIFKFIMAKLFNLPWTVERNL 145
NV ++F ++ +F++ T +R+L
Sbjct: 163 NVEQVFLQMITTIFDI--TNQRSL 184
>Medtr8g089985.1 | RAB GTPase-like protein A1D | HC |
chr8:37627491-37624788 | 20130731
Length = 225
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +TL + + IWD AG + R + +V ++++D+T R T + R
Sbjct: 51 GVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPR 110
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQ-ARAYARAMKATLFF--SSAT 118
W E R ++N + IL+G K D + Q + T+ A+ +A K LFF +SA
Sbjct: 111 WLEELRNHADKNIVIILVGNKSD------LENQRDVPTEDAKEFAE--KEGLFFLETSAL 162
Query: 119 HNINVNKIFKFIMAKLFNL 137
NV F ++ +++N+
Sbjct: 163 QATNVEASFMTVLTEIYNI 181
>Medtr2g075950.1 | RAB GTPase-like protein A1D | HC |
chr2:31789231-31793100 | 20130731
Length = 217
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +TL+V I IWD AG + R + +V L+++D+T T +V R
Sbjct: 47 GVEFATRTLNVDSKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDR 106
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTI-VTQARAYARAMKATLFF--SSAT 118
W E R + N + +L+G K DL+ + V+ + A K +L+F +SA
Sbjct: 107 WLKELRNHTDSNIVVMLVGNK--------ADLRHLVAVSTEDGKSYAEKESLYFMETSAL 158
Query: 119 HNINVNKIFKFIMAKLFNL 137
NV F ++ +++ +
Sbjct: 159 EATNVENAFAEVLTQIYRI 177
>Medtr7g103070.1 | RAB GTPase-like protein C2B | HC |
chr7:41440857-41436532 | 20130731
Length = 214
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ K L+V G R+ +IWD AG + R + + I++++D+T R T ++
Sbjct: 50 GVDFKIKMLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSE 109
Query: 63 -WYSEARKW--NQNAIPILIGTKFDDFVKFPPDLQWTIV-TQARAYARAMKATLFFSSAT 118
W E + NQ + +L+G K D D + + + + A+ + L SA
Sbjct: 110 VWSKELELYSTNQECVKMLVGNKVD------KDSERAVSREEGLSLAKELGCLLLECSAK 163
Query: 119 HNINVNKIFKFIMAKLFNLPWTVERN 144
NV K F+ + K+ P +E
Sbjct: 164 TRENVEKCFEELALKIMEAPSLLEEG 189
>Medtr7g051940.1 | RAB GTPase-like protein A1D | HC |
chr7:18234251-18230040 | 20130731
Length = 215
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ + + + G + IWD AG + R + + L+++D++ R T S+ R
Sbjct: 47 GVEFQTQMVEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFESIKR 106
Query: 63 WYSEARKWNQNAIP-ILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFF--SSATH 119
W E N + + +L+G K D +++ + + +A A + LFF +SA
Sbjct: 107 WLDELTTQNDSTVARMLVGNKCD-----LENIREVSIEEGKALAE--EEGLFFMETSALD 159
Query: 120 NINVNKIFKFIMAKLFN 136
+ NV F+ ++ +++N
Sbjct: 160 STNVQTAFEIVIREIYN 176
>Medtr3g087160.1 | RAB GTPase-like protein B1C | HC |
chr3:39530214-39525780 | 20130731
Length = 206
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ + KT+ ++ + +WD AG + R IP +DS +I++D+ +R + + +
Sbjct: 43 GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNK 102
Query: 63 WYSEAR-KWNQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + + I +L+G K D K + + + A +R +SA
Sbjct: 103 WVEEVRAERGSDVIIVLVGNKTDLVEK-----RQVSIEEGDAKSRESGIMFIETSAKAGF 157
Query: 122 NVNKIFKFIMAKL 134
N+ +F+ I + L
Sbjct: 158 NIKPLFRKIASAL 170
>Medtr8g090215.1 | RAB GTPase-like protein B1C | HC |
chr8:37854485-37851712 | 20130731
Length = 207
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ + KT+ ++ + +WD AG + R IP +DS +I++D+ +R + + +
Sbjct: 43 GIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTNK 102
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R+ + I +L+G K D K + + + A ++ +SA
Sbjct: 103 WVEEVRQERGSDVIIVLVGNKTDLVEK-----RQVSIEEGDAKSKEFGIMFIETSAKAGF 157
Query: 122 NVNKIFKFIMAKL 134
N+ +F+ I + L
Sbjct: 158 NIKPLFRKIASAL 170
>Medtr1g052475.1 | RAB GTPase-like protein A1D | HC |
chr1:21336471-21339658 | 20130731
Length = 223
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ KTL + + IWD AG + R + +V ++++D+T R + + R
Sbjct: 49 GVEFQTKTLVIDNKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAR 108
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFF--SSATH 119
W E R + N + +LIG K D L+ A+ +A+ + LFF +SA
Sbjct: 109 WLEELRGHADTNIVIMLIGNKCD-----LGTLKAVPTEDAQEFAQ--RENLFFMETSALE 161
Query: 120 NINVNKIFKFIMAKLFNL 137
+ NV F I+ +++ L
Sbjct: 162 STNVETAFLTILTEIYRL 179
>Medtr0262s0050.1 | RAB GTPase-like protein A1D | HC |
scaffold0262:13029-14834 | 20130731
Length = 222
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 12/139 (8%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ KTL + + IWD AG + R + +V ++++D+T R + + R
Sbjct: 49 GVEFQTKTLIIDNKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAR 108
Query: 63 WYSEARKW-NQNAIPILIGTKFD-DFVKFPPDLQWTIVTQARAYARAMKATLFF--SSAT 118
W E R ++N + +LIG K D +++ P + A +A+ + LFF +SA
Sbjct: 109 WLEELRSHADKNIVIMLIGNKCDLSYLRAVP------MEDAEEFAQ--RENLFFMETSAL 160
Query: 119 HNINVNKIFKFIMAKLFNL 137
NV F I+ +++ +
Sbjct: 161 EATNVETCFLTILTEIYRI 179
>Medtr7g100020.2 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198587 | 20130731
Length = 216
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ +T+ + G RI IWD AG + R + ++ IL+++D+T + +++
Sbjct: 49 GIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN 108
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W + + N IL+G K D + ++ +A A F +SA N+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNL 164
Query: 122 NVNKIF 127
NV ++F
Sbjct: 165 NVEEVF 170
>Medtr7g100020.1 | RAB GTPase-like protein A5B | HC |
chr7:40194971-40198610 | 20130731
Length = 216
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ +T+ + G RI IWD AG + R + ++ IL+++D+T + +++
Sbjct: 49 GIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN 108
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W + + N IL+G K D + ++ +A A F +SA N+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNL 164
Query: 122 NVNKIF 127
NV ++F
Sbjct: 165 NVEEVF 170
>Medtr1g068730.1 | RAB GTPase-like protein A5B | HC |
chr1:29344444-29337634 | 20130731
Length = 216
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 5/126 (3%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ +T+ + G RI IWD AG + R + ++ IL+++D+T + +++
Sbjct: 49 GIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN 108
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W + + N IL+G K D + ++ +A A F +SA N+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNM 164
Query: 122 NVNKIF 127
NV+++F
Sbjct: 165 NVDEVF 170
>Medtr1g115325.1 | RAB GTPase-like protein A5B | HC |
chr1:52031011-52034310 | 20130731
Length = 215
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ +T+ + G RI IWD AG + R + ++ IL+++D+T + +++
Sbjct: 49 GIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN 108
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W + + N IL+G K D + ++ +A A F +SA N+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNM 164
Query: 122 NVNKIF 127
NV ++F
Sbjct: 165 NVEEVF 170
>Medtr8g027220.1 | Ras-related small GTP-binding family protein | HC
| chr8:9528022-9525895 | 20130731
Length = 232
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +T+++ G I IWD AG + R + ++ ++++D+T R + V +
Sbjct: 60 GVEFQTRTVTINGKVIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAK 119
Query: 63 WYSEARKWNQNAIPI-LIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFS--SATH 119
W E R N+I I L+G K D DL+ A +A LFFS SA
Sbjct: 120 WVEELRAHADNSIVIMLVGNKGD-----LVDLRMVPTEDAVEFAE--DQGLFFSETSALT 172
Query: 120 NINVNKIFKFIMAKL 134
+NV F ++ ++
Sbjct: 173 GVNVEGAFMKLLEEI 187
>Medtr7g117910.1 | small GTPase family RAB protein | HC |
chr7:48931651-48932623 | 20130731
Length = 212
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +T+++ G I IWD AG + R + ++ ++++D+T R T V R
Sbjct: 54 GVEFQTRTVTINGKLIKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVAR 113
Query: 63 WYSEARKWNQNAIPI-LIGTKFD 84
W E R N+I I LIG K D
Sbjct: 114 WIEELRSHADNSIVIMLIGNKGD 136
>Medtr1g068740.1 | RAB GTPase-like protein A5B | HC |
chr1:29352144-29345511 | 20130731
Length = 216
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ +T+ + G RI IWD AG + R + ++ IL+++D+T + +++
Sbjct: 49 GIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN 108
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W + + N IL+G K D + ++ +A A F +SA N+
Sbjct: 109 WIRNIEQHASDNVNKILVGNKAD----MDESKRAVPTSKGQALADEYGIKFFETSAKTNM 164
Query: 122 NVNKIF 127
NV ++F
Sbjct: 165 NVEEVF 170
>Medtr7g103070.2 | RAB GTPase-like protein C2B | HC |
chr7:41440287-41436532 | 20130731
Length = 158
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 10/138 (7%)
Query: 11 LSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR-WYSEARK 69
L+V G R+ +IWD AG + R + + I++++D+T R T ++ W E
Sbjct: 2 LTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELEL 61
Query: 70 W--NQNAIPILIGTKFDDFVKFPPDLQWTIV-TQARAYARAMKATLFFSSATHNINVNKI 126
+ NQ + +L+G K D D + + + + A+ + L SA NV K
Sbjct: 62 YSTNQECVKMLVGNKVD------KDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKC 115
Query: 127 FKFIMAKLFNLPWTVERN 144
F+ + K+ P +E
Sbjct: 116 FEELALKIMEAPSLLEEG 133
>Medtr4g079350.1 | RAB GTPase-like protein C2B | HC |
chr4:30648654-30646057 | 20130731
Length = 217
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +++ V + IWD AG + R + +V L+++D+T T +V R
Sbjct: 47 GVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER 106
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + N + +L+G K D L+ A+A+A +SA ++
Sbjct: 107 WLKELRDHTDANIVIMLVGNKAD-----LRHLRAVSTDDAKAFAERENTFFMETSALESL 161
Query: 122 NVNKIFKFIMAKLFNL 137
NV+ F ++ +++ +
Sbjct: 162 NVDNSFTEVLTQIYRV 177
>Medtr7g405790.1 | RAB GTPase-like protein A1D | HC |
chr7:264041-266047 | 20130731
Length = 220
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ ++L + + IWD AG + R + +V LI++D++ R T SV R
Sbjct: 49 GVEFQTQSLEIDSKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGR 108
Query: 63 WYSEARKWNQNAIP-ILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFF--SSATH 119
W E + + +L+G K D +++ + + ++ A + LFF +SA
Sbjct: 109 WLDELKTHCDTTVAMMLVGNKCD-----LDNIRDVSIEEGKSLAES--EGLFFMETSALD 161
Query: 120 NINVNKIFKFIMAKLFN 136
+ NV F+ ++ +++N
Sbjct: 162 STNVKTAFEMVIREIYN 178
>Medtr3g064390.2 | small GTPase family RAB protein | HC |
chr3:28986937-28992404 | 20130731
Length = 158
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G +TL+V A + F IWD AG + PM + + A +I++D+TS + +
Sbjct: 44 GAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFSRAKK 103
Query: 63 WYSEARK-WNQNAIPILIGTKFD 84
W E +K N N + L G K D
Sbjct: 104 WVQELQKQGNPNMVMALAGNKSD 126
>Medtr2g005500.1 | RAB GTPase-like protein B1C | HC |
chr2:184631-186040 | 20130731
Length = 203
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ +T+ ++G IWD AG + R + + I+I++D+T + ++V +
Sbjct: 43 GVDFKIRTVELEGKTAKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQ 102
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E ++ N + +L+G K D D + A+A+A + +SA +I
Sbjct: 103 WLHEIDRYANHSVSKLLVGNKCD-----LTDNKLVHTHTAKAFADELGIPFLETSAKDSI 157
Query: 122 NVNKIFKFIMAKLFN 136
NV + F + A++ N
Sbjct: 158 NVEQAFLTMAAEIKN 172
>Medtr2g096550.1 | RAB GTPase-like protein A1D | HC |
chr2:41238336-41235628 | 20130731
Length = 213
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ ++ + + G +I +WD AG + R + ++ IL+++D+T + +++
Sbjct: 49 GIDYKNRAIELDGKKIMLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNITN 108
Query: 63 WYSEARKWNQNAI--PILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHN 120
W + + + I IL+G K D + ++ +A A F +SA N
Sbjct: 109 WIRSIEQHSSDNIVNKILVGNKVD----MDESKRAVPFSKGQALANKYGIKFFETSAKTN 164
Query: 121 INVNKIF 127
+NV++ F
Sbjct: 165 LNVDEAF 171
>Medtr2g090865.1 | RAB GTPase-like protein A1D | HC |
chr2:39001995-38999681 | 20130731
Length = 215
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +++ + + IWD AG + R + +V L+++D T T +V R
Sbjct: 45 GVEFATRSVRILDKLVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVER 104
Query: 63 WYSEARKWNQNAIPI-LIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + I L+G K D LQ +A +A +SA ++
Sbjct: 105 WLKELRDHTDAYVVIMLVGNKAD-----LKHLQAVSTEEATTFAEKENIYFMETSALESL 159
Query: 122 NVNKIFKFIMAKLFNL 137
NV+ F ++ +++N+
Sbjct: 160 NVDNAFVEVLTQIYNV 175
>Medtr2g014990.1 | RAB GTPase-like protein A1D | HC |
chr2:4375511-4372352 | 20130731
Length = 217
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +++ V + IWD AG + R + +V L+++D+T T +V R
Sbjct: 47 GVEFATRSIRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER 106
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + N + +L+G K D L+ + A+A +SA ++
Sbjct: 107 WLKELRDHTDANIVVMLVGNKAD-----LRHLRAVSTEDSTAFAERENTFFMETSALESM 161
Query: 122 NVNKIFKFIMAKLFNL 137
NV F ++ +++ +
Sbjct: 162 NVENAFTEVLTQIYRV 177
>Medtr8g031660.1 | RAB GTPase-like protein A5B | LC |
chr8:11902753-11902127 | 20130731
Length = 208
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ K ++++ RI IWD AG ++ R + + L+++D+T R T + +
Sbjct: 40 GVEFGIKFINIKNNRIKLHIWDTAGQETFRSITRSYYRGAAGALLVYDITKRETFNHLAT 99
Query: 63 WYSEARK-WNQNAIPILIGTKFD 84
W E R+ N N I L+G K D
Sbjct: 100 WLEEVREHGNSNTIITLVGNKSD 122
>Medtr4g099470.1 | RAB GTPase-like protein A2D | HC |
chr4:41298313-41300214 | 20130731
Length = 178
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G++ +T+ G I IWD AG + R + + I++++D+T + + ++V +
Sbjct: 18 GVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ 77
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W +E ++ ++N +L+G K D D + A+A+A + +SA +
Sbjct: 78 WLNEIDRYASENVNKLLVGNKSD-----LSDKKVVSSETAKAFADEIGIPFMETSAKNAS 132
Query: 122 NVNKIFKFIMAKLFN----LPWTVERNLTL---GEPI 151
NV + F + A++ N P R T+ G+P+
Sbjct: 133 NVEQAFMAMAAEIKNRMASQPANSARPATVQIRGQPV 169
>Medtr4g088090.1 | RAB GTPase-like protein A1D | HC |
chr4:34699316-34702141 | 20130731
Length = 217
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 6/136 (4%)
Query: 3 GLNLMDKTLSVQGARISFSIWDVAGDKSSRDQIPMACKDSVAILIMFDLTSRCTLHSVVR 62
G+ +++ V + IWD AG + R + +V L+++D+T T +V R
Sbjct: 47 GVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER 106
Query: 63 WYSEARKW-NQNAIPILIGTKFDDFVKFPPDLQWTIVTQARAYARAMKATLFFSSATHNI 121
W E R + N + +L+G K D L+ A +++ +SA ++
Sbjct: 107 WLKELRDHTDANIVVMLVGNKAD-----LRHLRAVSTEDATSFSERENTYFMETSALESL 161
Query: 122 NVNKIFKFIMAKLFNL 137
NV F ++ +++ +
Sbjct: 162 NVESAFTEVLTQIYRV 177