Miyakogusa Predicted Gene

Lj0g3v0244169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244169.1 Non Characterized Hit- tr|I1LQT5|I1LQT5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33713
PE,66.67,0.00000000000004,DUF966,Protein of unknown function
DUF966,BP034539.path1.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g063130.2 | auxin-regulated protein | HC | chr4:23360647-2...    74   2e-14
Medtr4g063130.1 | auxin-regulated protein | HC | chr4:23360644-2...    62   1e-10
Medtr4g057330.2 | auxin-regulated protein | HC | chr4:20983812-2...    47   3e-06
Medtr4g057330.1 | auxin-regulated protein | HC | chr4:20983812-2...    47   3e-06

>Medtr4g063130.2 | auxin-regulated protein | HC |
           chr4:23360647-23365038 | 20130731
          Length = 421

 Score = 74.3 bits (181), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 34/41 (82%), Positives = 39/41 (95%)

Query: 1   MEIPDLSRVRLEDKEYFSGSLIETQKVETPSLKRSNSYNAD 41
           +EIPDL+RVRLEDKEYFSGSLIET+KVE P+ KRS+SYNAD
Sbjct: 326 VEIPDLNRVRLEDKEYFSGSLIETKKVEAPAFKRSSSYNAD 366


>Medtr4g063130.1 | auxin-regulated protein | HC |
           chr4:23360644-23365038 | 20130731
          Length = 422

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/34 (82%), Positives = 32/34 (94%)

Query: 1   MEIPDLSRVRLEDKEYFSGSLIETQKVETPSLKR 34
           +EIPDL+RVRLEDKEYFSGSLIET+KVE P+ KR
Sbjct: 326 VEIPDLNRVRLEDKEYFSGSLIETKKVEAPAFKR 359


>Medtr4g057330.2 | auxin-regulated protein | HC |
           chr4:20983812-20980996 | 20130731
          Length = 409

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (6%)

Query: 1   MEIPDLSRVRLEDKEYFSGSLIETQKVETPS---LKRSNSYNADR 42
           +E P L  +RLEDKEYFSGSLIET+  E  +   LKRS+SYN +R
Sbjct: 267 VENPKLMNLRLEDKEYFSGSLIETKLKEGDARNVLKRSSSYNNER 311


>Medtr4g057330.1 | auxin-regulated protein | HC |
           chr4:20983812-20980996 | 20130731
          Length = 514

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (6%)

Query: 1   MEIPDLSRVRLEDKEYFSGSLIETQKVETPS---LKRSNSYNADR 42
           +E P L  +RLEDKEYFSGSLIET+  E  +   LKRS+SYN +R
Sbjct: 372 VENPKLMNLRLEDKEYFSGSLIETKLKEGDARNVLKRSSSYNNER 416