Miyakogusa Predicted Gene

Lj0g3v0244089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0244089.1 Non Characterized Hit- tr|I3T222|I3T222_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,44.7,2e-17,coiled-coil,NULL; seg,NULL,CUFF.15942.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein...    53   1e-07

>Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein |
           HC | chr8:18452465-18454633 | 20130731
          Length = 412

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)

Query: 74  NQCGFYGGFTSAILDIIEETQGQVTNVEL---ARKAMEKTRMQVVPGLHCNDSHHAYVPF 130
           N    YG F++AI  IIEET G +T  EL   AR+ ++K      PGL+C+D HH   PF
Sbjct: 352 NAANAYGAFSNAIQAIIEETDGAITYSELILKAREKLQKDGFTQKPGLYCSD-HHVDDPF 410

Query: 131 IC 132
           +C
Sbjct: 411 LC 412