Miyakogusa Predicted Gene

Lj0g3v0243119.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0243119.1 Non Characterized Hit- tr|K3Z5F8|K3Z5F8_SETIT
Uncharacterized protein OS=Setaria italica GN=Si021776,47.41,3e-19,K
homology RNA-binding domain,K Homology domain; KH_1,K Homology domain,
type 1; Eukaryotic type
KH-,NODE_46538_length_533_cov_164.864914.path1.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g127380.1 | poly(rC)-binding-like protein | HC | chr4:5286...   179   5e-46
Medtr2g038020.1 | poly(rC)-binding-like protein | HC | chr2:1650...   167   2e-42
Medtr1g070380.1 | poly(rC)-binding-like protein | HC | chr1:3114...   101   2e-22
Medtr7g115340.1 | poly(rC)-binding-like protein | HC | chr7:4764...    99   1e-21
Medtr1g070380.3 | poly(rC)-binding-like protein | HC | chr1:3114...    98   2e-21
Medtr1g070380.2 | poly(rC)-binding-like protein | HC | chr1:3114...    98   2e-21
Medtr7g115340.2 | poly(rC)-binding-like protein | HC | chr7:4764...    97   5e-21
Medtr4g093650.1 | RNA-binding KH domain protein | HC | chr4:3709...    59   1e-09
Medtr7g011080.2 | RNA-binding KH domain protein | HC | chr7:2893...    58   2e-09
Medtr7g011080.1 | RNA-binding KH domain protein | HC | chr7:2893...    58   2e-09
Medtr3g110650.2 | RNA-binding KH domain protein | HC | chr3:5171...    55   2e-08
Medtr3g110650.1 | RNA-binding KH domain protein | HC | chr3:5171...    55   2e-08
Medtr7g080630.4 | poly(rC)-binding-like protein | HC | chr7:3070...    55   2e-08
Medtr7g080630.1 | poly(rC)-binding-like protein | HC | chr7:3070...    55   2e-08
Medtr7g080630.2 | poly(rC)-binding-like protein | HC | chr7:3070...    55   2e-08
Medtr5g031720.1 | RNA-binding KH domain protein | HC | chr5:1360...    54   5e-08
Medtr7g080630.3 | poly(rC)-binding-like protein | HC | chr7:3070...    53   5e-08
Medtr7g080630.5 | poly(rC)-binding-like protein | HC | chr7:3070...    53   6e-08
Medtr6g012630.1 | RNA-binding KH domain protein | HC | chr6:3864...    53   6e-08
Medtr6g012630.5 | RNA-binding KH domain protein | HC | chr6:3864...    53   6e-08
Medtr6g012630.2 | RNA-binding KH domain protein | HC | chr6:3864...    53   6e-08
Medtr6g012630.4 | RNA-binding KH domain protein | HC | chr6:3864...    53   7e-08
Medtr6g012630.3 | RNA-binding KH domain protein | HC | chr6:3864...    53   8e-08
Medtr2g009650.1 | RNA-binding KH domain protein | HC | chr2:2001...    50   7e-07

>Medtr4g127380.1 | poly(rC)-binding-like protein | HC |
           chr4:52864244-52858917 | 20130731
          Length = 431

 Score =  179 bits (454), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/116 (75%), Positives = 102/116 (87%), Gaps = 4/116 (3%)

Query: 1   MDAVIRIFKRVSGLAEIE----AAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTG 56
           MDA++RIFKRVSGL+E +    AA G   CS+RLLVASTQAINLIGKQGS IK+IQE+TG
Sbjct: 107 MDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENTG 166

Query: 57  AAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 112
           A +RVL+GDELPSYA ADERI+++QGE LKVLKALEAVVGHLRKFLVD +V+PLFE
Sbjct: 167 AVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRKFLVDSSVIPLFE 222


>Medtr2g038020.1 | poly(rC)-binding-like protein | HC |
           chr2:16509240-16516412 | 20130731
          Length = 470

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 81/116 (69%), Positives = 102/116 (87%), Gaps = 4/116 (3%)

Query: 1   MDAVIRIFKRVSGLAEIEA----APGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTG 56
           MDAVIRIFKRVSGL+E ++      G T CS+RLLVASTQAI+LIGKQG++I+SIQES+G
Sbjct: 133 MDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESSG 192

Query: 57  AAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 112
           A+VRVL+GDE+  +A A+ERIV++QGE L VLKALEAV+GHLRKFLVDH++LP++E
Sbjct: 193 ASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDHSILPVYE 248


>Medtr1g070380.1 | poly(rC)-binding-like protein | HC |
           chr1:31149691-31143604 | 20130731
          Length = 567

 Score =  101 bits (251), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/115 (47%), Positives = 79/115 (68%), Gaps = 3/115 (2%)

Query: 1   MDAVIRIFKRVSGLAE--IEAAPGATFCSV-RLLVASTQAINLIGKQGSLIKSIQESTGA 57
           ++ ++R+ K+V+ +     + A GA   S+ RLLVA TQA +LIGKQGS IK  Q+STG 
Sbjct: 228 VEGLLRVHKQVANVVSEPADTAQGAGRPSITRLLVADTQAGSLIGKQGSTIKIFQDSTGC 287

Query: 58  AVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 112
            +R+L  + LP +A  D+ IVE+QGEP  V KA+E +  HLRKFLVD +++ +FE
Sbjct: 288 NIRILGSEHLPIFALRDDSIVEIQGEPAGVHKAVELIALHLRKFLVDRSIVGVFE 342


>Medtr7g115340.1 | poly(rC)-binding-like protein | HC |
           chr7:47649189-47656173 | 20130731
          Length = 510

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 3/113 (2%)

Query: 1   MDAVIRIFKR-VSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 59
           +D +++  KR + GL       G    S + LV ++QA +LIGKQG  +KSIQE++   V
Sbjct: 178 VDGLLKAHKRLIDGLDAPSGLAGKV--STKFLVPASQAGSLIGKQGGTVKSIQEASNCIV 235

Query: 60  RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 112
           RVL  ++LP +A  D+R+VEV G+P+ V KA+E +  HL+KFLVD +++P+FE
Sbjct: 236 RVLGAEDLPVFALQDDRVVEVVGDPIGVHKAVEMIASHLKKFLVDRSIIPIFE 288


>Medtr1g070380.3 | poly(rC)-binding-like protein | HC |
           chr1:31149687-31143883 | 20130731
          Length = 568

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/116 (47%), Positives = 80/116 (68%), Gaps = 4/116 (3%)

Query: 1   MDAVIRIFKRVSGLAE--IEAAPGATFCSV-RLLVASTQAINLIGKQGSLIKSIQESTGA 57
           ++ ++R+ K+V+ +     + A GA   S+ RLLVA TQA +LIGKQGS IK  Q+STG 
Sbjct: 228 VEGLLRVHKQVANVVSEPADTAQGAGRPSITRLLVADTQAGSLIGKQGSTIKIFQDSTGC 287

Query: 58  AVRVL-TGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 112
            +R+L + + LP +A  D+ IVE+QGEP  V KA+E +  HLRKFLVD +++ +FE
Sbjct: 288 NIRILGSAEHLPIFALRDDSIVEIQGEPAGVHKAVELIALHLRKFLVDRSIVGVFE 343


>Medtr1g070380.2 | poly(rC)-binding-like protein | HC |
           chr1:31149683-31143883 | 20130731
          Length = 568

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/116 (47%), Positives = 80/116 (68%), Gaps = 4/116 (3%)

Query: 1   MDAVIRIFKRVSGLAE--IEAAPGATFCSV-RLLVASTQAINLIGKQGSLIKSIQESTGA 57
           ++ ++R+ K+V+ +     + A GA   S+ RLLVA TQA +LIGKQGS IK  Q+STG 
Sbjct: 228 VEGLLRVHKQVANVVSEPADTAQGAGRPSITRLLVADTQAGSLIGKQGSTIKIFQDSTGC 287

Query: 58  AVRVL-TGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 112
            +R+L + + LP +A  D+ IVE+QGEP  V KA+E +  HLRKFLVD +++ +FE
Sbjct: 288 NIRILGSAEHLPIFALRDDSIVEIQGEPAGVHKAVELIALHLRKFLVDRSIVGVFE 343


>Medtr7g115340.2 | poly(rC)-binding-like protein | HC |
           chr7:47649475-47656173 | 20130731
          Length = 442

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 3/113 (2%)

Query: 1   MDAVIRIFKR-VSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 59
           +D +++  KR + GL       G    S + LV ++QA +LIGKQG  +KSIQE++   V
Sbjct: 110 VDGLLKAHKRLIDGLDAPSGLAGKV--STKFLVPASQAGSLIGKQGGTVKSIQEASNCIV 167

Query: 60  RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 112
           RVL  ++LP +A  D+R+VEV G+P+ V KA+E +  HL+KFLVD +++P+FE
Sbjct: 168 RVLGAEDLPVFALQDDRVVEVVGDPIGVHKAVEMIASHLKKFLVDRSIIPIFE 220


>Medtr4g093650.1 | RNA-binding KH domain protein | HC |
           chr4:37099130-37092340 | 20130731
          Length = 616

 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 4/102 (3%)

Query: 1   MDAVIRIFKRVSGLAEIEA---APGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGA 57
            +A++++F+R+  +A  E+     G    S RLLV + QA  +IGK G ++  I+  TG 
Sbjct: 84  QEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIRADTGC 143

Query: 58  AVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLR 99
            +RVL  D+LP+     + I+E+QG    V KAL AV G L+
Sbjct: 144 RIRVLN-DKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQ 184


>Medtr7g011080.2 | RNA-binding KH domain protein | HC |
           chr7:2893165-2900092 | 20130731
          Length = 571

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 13/109 (11%)

Query: 1   MDAVIRIFKRVSGLAE-----------IEAAPGATFCSVRLLVASTQAINLIGKQGSLIK 49
           MDA++RI ++V  +AE           +E   G    + +LLVAS Q   +IGK G +++
Sbjct: 119 MDALVRIHQKV--IAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQ 176

Query: 50  SIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL 98
           +I+  TGA +R+L  D LP  A   + +V++ GE   V KAL  V   L
Sbjct: 177 NIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARL 225



 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%)

Query: 16  EIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADE 75
           ++E   G    + RLLV+S++   LIGK GS+I  ++  T A +R+L+ ++LP  A  D+
Sbjct: 372 KVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDD 431

Query: 76  RIVEVQGEPLKVLKALEAVVGHLRKFLVD 104
            +V++ GE      AL  V+  LR  L D
Sbjct: 432 EMVQISGELDIAKDALLQVLTRLRANLFD 460


>Medtr7g011080.1 | RNA-binding KH domain protein | HC |
           chr7:2893165-2900092 | 20130731
          Length = 571

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 13/109 (11%)

Query: 1   MDAVIRIFKRVSGLAE-----------IEAAPGATFCSVRLLVASTQAINLIGKQGSLIK 49
           MDA++RI ++V  +AE           +E   G    + +LLVAS Q   +IGK G +++
Sbjct: 119 MDALVRIHQKV--IAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQ 176

Query: 50  SIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL 98
           +I+  TGA +R+L  D LP  A   + +V++ GE   V KAL  V   L
Sbjct: 177 NIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARL 225



 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%)

Query: 16  EIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADE 75
           ++E   G    + RLLV+S++   LIGK GS+I  ++  T A +R+L+ ++LP  A  D+
Sbjct: 372 KVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDD 431

Query: 76  RIVEVQGEPLKVLKALEAVVGHLRKFLVD 104
            +V++ GE      AL  V+  LR  L D
Sbjct: 432 EMVQISGELDIAKDALLQVLTRLRANLFD 460


>Medtr3g110650.2 | RNA-binding KH domain protein | HC |
           chr3:51710144-51714718 | 20130731
          Length = 662

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 6/112 (5%)

Query: 1   MDAVIRIFKRVSGLAEIEAAPGAT--FCSVRLLVASTQAINLIGKQGSLIKSIQESTGAA 58
           M AV+ +F+RV   AE E    +   +  +RLL+ S Q   ++GK GS+IK +   +GA 
Sbjct: 141 MRAVMLVFERV---AEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQ 197

Query: 59  VRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL-RKFLVDHTVLP 109
           +R+L  +E+P+ A+  + +V++ G    V +AL++V   L      DH  LP
Sbjct: 198 IRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESLP 249


>Medtr3g110650.1 | RNA-binding KH domain protein | HC |
           chr3:51710144-51714718 | 20130731
          Length = 662

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 6/112 (5%)

Query: 1   MDAVIRIFKRVSGLAEIEAAPGAT--FCSVRLLVASTQAINLIGKQGSLIKSIQESTGAA 58
           M AV+ +F+RV   AE E    +   +  +RLL+ S Q   ++GK GS+IK +   +GA 
Sbjct: 141 MRAVMLVFERV---AEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQ 197

Query: 59  VRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL-RKFLVDHTVLP 109
           +R+L  +E+P+ A+  + +V++ G    V +AL++V   L      DH  LP
Sbjct: 198 IRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESLP 249


>Medtr7g080630.4 | poly(rC)-binding-like protein | HC |
           chr7:30700618-30707328 | 20130731
          Length = 379

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADE--RIVEVQGEP 84
           ++RLL+A +QA  LIG  G  I+ ++ S+GA + VL   +LP  A+A E  R+V++ G+ 
Sbjct: 194 TIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDV 253

Query: 85  LKVLKALEAVVGHLRK 100
             V+KALE +   LR+
Sbjct: 254 STVMKALEEIGCQLRE 269


>Medtr7g080630.1 | poly(rC)-binding-like protein | HC |
           chr7:30700618-30706480 | 20130731
          Length = 379

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADE--RIVEVQGEP 84
           ++RLL+A +QA  LIG  G  I+ ++ S+GA + VL   +LP  A+A E  R+V++ G+ 
Sbjct: 194 TIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDV 253

Query: 85  LKVLKALEAVVGHLRK 100
             V+KALE +   LR+
Sbjct: 254 STVMKALEEIGCQLRE 269


>Medtr7g080630.2 | poly(rC)-binding-like protein | HC |
           chr7:30700618-30707393 | 20130731
          Length = 379

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADE--RIVEVQGEP 84
           ++RLL+A +QA  LIG  G  I+ ++ S+GA + VL   +LP  A+A E  R+V++ G+ 
Sbjct: 194 TIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDV 253

Query: 85  LKVLKALEAVVGHLRK 100
             V+KALE +   LR+
Sbjct: 254 STVMKALEEIGCQLRE 269


>Medtr5g031720.1 | RNA-binding KH domain protein | HC |
           chr5:13608841-13602499 | 20130731
          Length = 596

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)

Query: 1   MDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVR 60
            + V+R+F RV GL   +   G  +   +LL  S+Q   ++GK G  I +I+ ++G+ +R
Sbjct: 111 QEGVVRVFDRVWGLESEKGGNGEVYG--KLLAHSSQVGAIVGKGGKNISNIRNNSGSNIR 168

Query: 61  VLTGDELPSYAAADERIVEVQGEPLKVLKAL 91
           V      P  AA DE ++ + GE L V KAL
Sbjct: 169 VCPA---PHCAAKDEELILITGESLAVKKAL 196


>Medtr7g080630.3 | poly(rC)-binding-like protein | HC |
           chr7:30700618-30706480 | 20130731
          Length = 312

 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADE--RIVEVQGEP 84
           ++RLL+A +QA  LIG  G  I+ ++ S+GA + VL   +LP  A+A E  R+V++ G+ 
Sbjct: 194 TIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDV 253

Query: 85  LKVLKALEAVVGHLRK 100
             V+KALE +   LR+
Sbjct: 254 STVMKALEEIGCQLRE 269


>Medtr7g080630.5 | poly(rC)-binding-like protein | HC |
           chr7:30700621-30706773 | 20130731
          Length = 306

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADE--RIVEVQGEP 84
           ++RLL+A +QA  LIG  G  I+ ++ S+GA + VL   +LP  A+A E  R+V++ G+ 
Sbjct: 194 TIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDV 253

Query: 85  LKVLKALEAVVGHLRK 100
             V+KALE +   LR+
Sbjct: 254 STVMKALEEIGCQLRE 269


>Medtr6g012630.1 | RNA-binding KH domain protein | HC |
           chr6:3864952-3868465 | 20130731
          Length = 553

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 2   DAVIRIFKRV--SGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 59
           DA+ +I  RV    L   +   G    + +LLV S Q   ++GK G ++++++  TGA +
Sbjct: 118 DALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQI 177

Query: 60  RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL 98
           R+L  D +P+ A   + +V++ G+   V KAL  +   L
Sbjct: 178 RILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216



 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 47/78 (60%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLK 86
           + RLLV+S++   LIGK GS+I  ++  T + +R+L+ + LP  A+ D+ +V++ G+   
Sbjct: 375 TTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDV 434

Query: 87  VLKALEAVVGHLRKFLVD 104
              AL  V+  LR  L D
Sbjct: 435 AKDALVQVLTRLRANLFD 452


>Medtr6g012630.5 | RNA-binding KH domain protein | HC |
           chr6:3864952-3868465 | 20130731
          Length = 553

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 2   DAVIRIFKRV--SGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 59
           DA+ +I  RV    L   +   G    + +LLV S Q   ++GK G ++++++  TGA +
Sbjct: 118 DALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQI 177

Query: 60  RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL 98
           R+L  D +P+ A   + +V++ G+   V KAL  +   L
Sbjct: 178 RILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216



 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 47/78 (60%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLK 86
           + RLLV+S++   LIGK GS+I  ++  T + +R+L+ + LP  A+ D+ +V++ G+   
Sbjct: 375 TTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDV 434

Query: 87  VLKALEAVVGHLRKFLVD 104
              AL  V+  LR  L D
Sbjct: 435 AKDALVQVLTRLRANLFD 452


>Medtr6g012630.2 | RNA-binding KH domain protein | HC |
           chr6:3864952-3868465 | 20130731
          Length = 553

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 2   DAVIRIFKRV--SGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 59
           DA+ +I  RV    L   +   G    + +LLV S Q   ++GK G ++++++  TGA +
Sbjct: 118 DALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQI 177

Query: 60  RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL 98
           R+L  D +P+ A   + +V++ G+   V KAL  +   L
Sbjct: 178 RILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216



 Score = 50.8 bits (120), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 47/78 (60%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLK 86
           + RLLV+S++   LIGK GS+I  ++  T + +R+L+ + LP  A+ D+ +V++ G+   
Sbjct: 375 TTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDV 434

Query: 87  VLKALEAVVGHLRKFLVD 104
              AL  V+  LR  L D
Sbjct: 435 AKDALVQVLTRLRANLFD 452


>Medtr6g012630.4 | RNA-binding KH domain protein | HC |
           chr6:3864952-3867538 | 20130731
          Length = 538

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 2   DAVIRIFKRV--SGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 59
           DA+ +I  RV    L   +   G    + +LLV S Q   ++GK G ++++++  TGA +
Sbjct: 118 DALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQI 177

Query: 60  RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL 98
           R+L  D +P+ A   + +V++ G+   V KAL  +   L
Sbjct: 178 RILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216



 Score = 50.4 bits (119), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 47/78 (60%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLK 86
           + RLLV+S++   LIGK GS+I  ++  T + +R+L+ + LP  A+ D+ +V++ G+   
Sbjct: 375 TTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDV 434

Query: 87  VLKALEAVVGHLRKFLVD 104
              AL  V+  LR  L D
Sbjct: 435 AKDALVQVLTRLRANLFD 452


>Medtr6g012630.3 | RNA-binding KH domain protein | HC |
           chr6:3864952-3867231 | 20130731
          Length = 451

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 2   DAVIRIFKRV--SGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 59
           DA+ +I  RV    L   +   G    + +LLV S Q   ++GK G ++++++  TGA +
Sbjct: 118 DALFKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQI 177

Query: 60  RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHL 98
           R+L  D +P+ A   + +V++ G+   V KAL  +   L
Sbjct: 178 RILKDDHVPACALRSDELVQISGDAAVVKKALHQIASRL 216


>Medtr2g009650.1 | RNA-binding KH domain protein | HC |
           chr2:2001720-2009761 | 20130731
          Length = 766

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 4/111 (3%)

Query: 1   MDAVIRIFKRVSGLA-EIEAAP-GATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAA 58
            +A++R+F R+  +A E+E    G    S RL+  S QA ++IGK G +++ I++ TG  
Sbjct: 125 QEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCK 184

Query: 59  VRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLR-KFLVDHTVL 108
           + V   D LP+  ++ + ++E++G    V KAL AV  +L+ +   D T +
Sbjct: 185 IWVCK-DNLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQDRHHADRTKM 234



 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 50/81 (61%)

Query: 27  SVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLK 86
           + +L+V+S Q   L+GK G ++  ++++TGA++R++  D++   A+ ++++V++ GE   
Sbjct: 424 TAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSN 483

Query: 87  VLKALEAVVGHLRKFLVDHTV 107
           V  AL    G LR  L   T+
Sbjct: 484 VQDALYNATGRLRDNLFGGTL 504