Miyakogusa Predicted Gene

Lj0g3v0243069.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0243069.1 tr|D6MJW7|D6MJW7_9ASPA Transcription factor
(Fragment) OS=Lycoris longituba PE=2 SV=1,40.45,3e-19,no
description,Tify; seg,NULL; TIFY,Tify; CCT_2,CO/COL/TOC1, conserved
site; tify,Tify,NODE_47929_length_724_cov_54.046963.path2.1
         (203 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g042900.1 | jasmonate zim-domain protein | HC | chr2:18686...   160   5e-40
Medtr4g124960.1 | jasmonate zim-domain protein | HC | chr4:51828...   135   3e-32
Medtr5g013530.1 | jasmonate zim-domain protein | HC | chr5:43109...   116   2e-26
Medtr4g124960.2 | jasmonate zim-domain protein | HC | chr4:51828...   113   9e-26
Medtr5g013530.2 | jasmonate zim-domain protein | HC | chr5:43111...   113   1e-25
Medtr2g042900.2 | jasmonate zim-domain protein | HC | chr2:18686...   112   2e-25
Medtr5g013520.1 | jasmonate zim-domain protein | HC | chr5:43058...   111   5e-25
Medtr5g013515.1 | jasmonate zim-domain protein | HC | chr5:43008...   107   5e-24
Medtr8g021380.1 | jasmonate zim-domain protein | HC | chr8:76864...    77   1e-14
Medtr4g124950.1 | jasmonate zim-domain protein | LC | chr4:51825...    73   2e-13
Medtr8g021380.2 | jasmonate zim-domain protein | HC | chr8:76864...    64   1e-10

>Medtr2g042900.1 | jasmonate zim-domain protein | HC |
           chr2:18686325-18688824 | 20130731
          Length = 253

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 124/241 (51%), Gaps = 64/241 (26%)

Query: 17  TTFSQTCNLLSQYLKEKGSFGDLTLGMERNVQGSP-----------VTTMELFPMATQNL 65
           TTFSQTC+LLSQY+KEKG F DL+LG+  N   +             TTM LFP    NL
Sbjct: 23  TTFSQTCSLLSQYIKEKGCFKDLSLGITCNNNNTDPSGSSETSSQSATTMNLFPTMENNL 82

Query: 66  KSMNLFYPPQQSEVPTLVKSSAMGNE-----PKAAQLTMFYEGQVIGFDDFPAEKVKEIM 120
              NL      + +  L   +A+ N      PKAAQLTMFY GQVI FDDFPA+K +E+M
Sbjct: 83  SQKNL------TTMDLLTPQAALNNSNAIKGPKAAQLTMFYNGQVIVFDDFPADKAQELM 136

Query: 121 AYASKGVXXXXXXX-----------------XXXXXXXXXXPSI---------------- 147
           A+A+KG+                                  P++                
Sbjct: 137 AFANKGISQSQNNSVYTYTQSQPSFPPNLVRTSVNTTTPIVPTVNIIPSTATGTGSMNEH 196

Query: 148 -----RPIVHDLPIARKVSLHRFLEKRKDRISSKAPYQISAPEKPVESISWLGLGATPTQ 202
                RP + DLPI RK SLHRFLEKRKDRI++ APYQI+   KP ES+SWL +GA  TQ
Sbjct: 197 LQVPSRPNLCDLPIMRKASLHRFLEKRKDRIAANAPYQIN---KPAESMSWL-VGAKSTQ 252

Query: 203 I 203
           I
Sbjct: 253 I 253


>Medtr4g124960.1 | jasmonate zim-domain protein | HC |
           chr4:51828988-51826800 | 20130731
          Length = 203

 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 110/198 (55%), Gaps = 31/198 (15%)

Query: 18  TFSQTCNLLSQYLKEK-GSFGDLTLGM-ERNVQGSPVT-----TMELFP--MATQNLKSM 68
           TFSQTCNLL QYLKEK GSF    L   E N      +     TM+LFP  +  +NL +M
Sbjct: 23  TFSQTCNLLRQYLKEKKGSFEGFNLHTPETNGSSPGSSSHSGITMDLFPTNVTPKNLTTM 82

Query: 69  NLFYPPQQSEVPTLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVX 128
           + F+P     V  +VK      EP+ AQLTMFY GQVI  DDFPAEKV+E+ ++A     
Sbjct: 83  DFFFP---RVVNPMVK------EPETAQLTMFYNGQVIVLDDFPAEKVEELKSFA----- 128

Query: 129 XXXXXXXXXXXXXXXXPSIRPIVHDLPIARKVSLHRFLEKRKDRISSKAPYQ-----ISA 183
                           P   P + D+PIARK SL RF+EKRKDR+S  +PYQ      +A
Sbjct: 129 ---RTQTQHSDVPTMIPQQPPSLIDMPIARKASLRRFMEKRKDRVSVYSPYQRICPDSAA 185

Query: 184 PEKPVESISWLGLGATPT 201
           PEK  ES  WL LGA  T
Sbjct: 186 PEKHAESAPWLVLGAKST 203


>Medtr5g013530.1 | jasmonate zim-domain protein | HC |
           chr5:4310978-4312243 | 20130731
          Length = 173

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/161 (42%), Positives = 89/161 (55%), Gaps = 24/161 (14%)

Query: 60  MATQNLKSMNLFYPPQQ--SEVPTLVKSSAMG-----NEPKAAQLTMFYEGQVIGFDDFP 112
           M   N+  MN    P     E+P L  SS M       EP  AQ+T+FY+G+VI FDD P
Sbjct: 1   MNHHNITPMNFQQFPHLFLQEIPILGNSSVMKANIKKEEPSCAQMTIFYDGKVIVFDDVP 60

Query: 113 AEKVKEIMAYASKGVXXXXXXXXXXXXXXX-----------XXPSIRPIVHDLPIARKVS 161
           A+K K+IM +++KG+                            PSI P+++DLP+ RK S
Sbjct: 61  ADKAKDIMDFSTKGIASTSQNHNNNYAYSSFLSRNSLQDYPQVPSI-PVIYDLPMTRKAS 119

Query: 162 LHRFLEKRKDRISSKAPYQISAP----EKPV-ESISWLGLG 197
           LHRFLEKRKDRI++KAPYQ S P     KP+ ES+SWL L 
Sbjct: 120 LHRFLEKRKDRIAAKAPYQTSNPAAFLNKPIDESMSWLSLA 160


>Medtr4g124960.2 | jasmonate zim-domain protein | HC |
           chr4:51828971-51827278 | 20130731
          Length = 175

 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/169 (44%), Positives = 94/169 (55%), Gaps = 26/169 (15%)

Query: 18  TFSQTCNLLSQYLKEK-GSFGDLTLGM-ERNVQGSPVT-----TMELFP--MATQNLKSM 68
           TFSQTCNLL QYLKEK GSF    L   E N      +     TM+LFP  +  +NL +M
Sbjct: 23  TFSQTCNLLRQYLKEKKGSFEGFNLHTPETNGSSPGSSSHSGITMDLFPTNVTPKNLTTM 82

Query: 69  NLFYPPQQSEVPTLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVX 128
           + F+P     V  +VK      EP+ AQLTMFY GQVI  DDFPAEKV+E+ ++A     
Sbjct: 83  DFFFP---RVVNPMVK------EPETAQLTMFYNGQVIVLDDFPAEKVEELKSFA----- 128

Query: 129 XXXXXXXXXXXXXXXXPSIRPIVHDLPIARKVSLHRFLEKRKDRISSKA 177
                           P   P + D+PIARK SL RF+EKRKDR +S+ 
Sbjct: 129 ---RTQTQHSDVPTMIPQQPPSLIDMPIARKASLRRFMEKRKDRYASQT 174


>Medtr5g013530.2 | jasmonate zim-domain protein | HC |
           chr5:4311173-4312058 | 20130731
          Length = 151

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 82/133 (61%), Gaps = 17/133 (12%)

Query: 81  TLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVXXXXXXXXXXXXX 140
           +++K++    EP  AQ+T+FY+G+VI FDD PA+K K+IM +++KG+             
Sbjct: 7   SVMKANIKKEEPSCAQMTIFYDGKVIVFDDVPADKAKDIMDFSTKGIASTSQNHNNNYAY 66

Query: 141 XX-----------XXPSIRPIVHDLPIARKVSLHRFLEKRKDRISSKAPYQISAP----E 185
                          PSI P+++DLP+ RK SLHRFLEKRKDRI++KAPYQ S P     
Sbjct: 67  SSFLSRNSLQDYPQVPSI-PVIYDLPMTRKASLHRFLEKRKDRIAAKAPYQTSNPAAFLN 125

Query: 186 KPV-ESISWLGLG 197
           KP+ ES+SWL L 
Sbjct: 126 KPIDESMSWLSLA 138


>Medtr2g042900.2 | jasmonate zim-domain protein | HC |
           chr2:18686337-18688839 | 20130731
          Length = 256

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 77/127 (60%), Gaps = 22/127 (17%)

Query: 17  TTFSQTCNLLSQYLKEKGSFGDLTLGMERNVQGSP-----------VTTMELFPMATQNL 65
           TTFSQTC+LLSQY+KEKG F DL+LG+  N   +             TTM LFP    NL
Sbjct: 23  TTFSQTCSLLSQYIKEKGCFKDLSLGITCNNNNTDPSGSSETSSQSATTMNLFPTMENNL 82

Query: 66  KSMNLFYPPQQSEVPTLVKSSAMGNE-----PKAAQLTMFYEGQVIGFDDFPAEKVKEIM 120
              NL      + +  L   +A+ N      PKAAQLTMFY GQVI FDDFPA+K +E+M
Sbjct: 83  SQKNL------TTMDLLTPQAALNNSNAIKGPKAAQLTMFYNGQVIVFDDFPADKAQELM 136

Query: 121 AYASKGV 127
           A+A+KG+
Sbjct: 137 AFANKGI 143


>Medtr5g013520.1 | jasmonate zim-domain protein | HC |
           chr5:4305887-4307508 | 20130731
          Length = 146

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/131 (44%), Positives = 80/131 (61%), Gaps = 16/131 (12%)

Query: 82  LVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVXXXXXXXXXXXXXX 141
           ++K++    EPK AQ+T+ Y+G+VI FDD PA+K K+IM +++KG+              
Sbjct: 1   VMKANIKKEEPKCAQMTILYDGKVIVFDDVPADKAKDIMDFSTKGITSTSQHHNNNYAYS 60

Query: 142 X-----------XXPSIRPIVHDLPIARKVSLHRFLEKRKDRISSKAPYQISAP---EKP 187
                         PSI P ++DLP+ RK SLHRFLEKRKDRI++KAPYQ S P    KP
Sbjct: 61  SFLARNSLQDCYQVPSI-PAIYDLPMTRKASLHRFLEKRKDRIAAKAPYQTSNPTTINKP 119

Query: 188 V-ESISWLGLG 197
           + ES++WL L 
Sbjct: 120 IDESMTWLSLA 130


>Medtr5g013515.1 | jasmonate zim-domain protein | HC |
           chr5:4300830-4301739 | 20130731
          Length = 140

 Score =  107 bits (268), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 79/135 (58%), Gaps = 20/135 (14%)

Query: 83  VKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVXXXXXXXXXXXXX-- 140
           +K++ +  EPK  Q+T+FY+G++I FDD PAEKV++IM ++S+G                
Sbjct: 1   MKANIIKEEPKCTQMTIFYDGKIIVFDDIPAEKVEDIMVFSSEGTTTSRNHKNNNYAFRF 60

Query: 141 XXXXPSI--------------RPIVHDLPIARKVSLHRFLEKRKDRISSKAPYQISAP-- 184
               PS                P+++DLP+ RK SLHRFLEKRKDRI++KAPYQ S P  
Sbjct: 61  AQSHPSFLARNSANNSVQVPSSPVIYDLPMTRKASLHRFLEKRKDRIAAKAPYQTSNPTN 120

Query: 185 -EKPV-ESISWLGLG 197
             KP+ E +SWL L 
Sbjct: 121 LNKPINEFMSWLSLA 135


>Medtr8g021380.1 | jasmonate zim-domain protein | HC |
           chr8:7686461-7689149 | 20130731
          Length = 235

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 82/188 (43%), Gaps = 23/188 (12%)

Query: 19  FSQTCNLLSQYLKEKGSFGDLTLGMERNVQGSPVTTMELFPMATQN----LKSMNLFYPP 74
           FSQTC+LLSQ+LKEK   GD T      ++    T   L  M   +    L +  +   P
Sbjct: 24  FSQTCSLLSQFLKEKRISGDATPSFFGKMEPKASTKDLLANMQNSDGGLRLNASAIESLP 83

Query: 75  QQSEVPTLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASKGVXXXXXXX 134
           Q  E P + KS+    +PK  QLT+FY G+++ FD F      EIM  A+K         
Sbjct: 84  QLVENPCIKKSNTRSTDPKTPQLTIFYSGKMLVFDAFSPSNATEIMELATKLASENPSTE 143

Query: 135 XXXXXXXXXXPSIR-------------------PIVHDLPIARKVSLHRFLEKRKDRISS 175
                       ++                       D+   R+ SL +FLEKRK+R+ +
Sbjct: 144 ENPPSAPVTTEKLKESEIPQTNTALETTEQGNQAKCSDMRYPRRASLLKFLEKRKERVIA 203

Query: 176 KAPYQISA 183
           + PYQI+ 
Sbjct: 204 RGPYQING 211


>Medtr4g124950.1 | jasmonate zim-domain protein | LC |
           chr4:51825670-51824285 | 20130731
          Length = 128

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 16/137 (11%)

Query: 55  MELFPMATQNLKSMNLFYPPQQSEVPTLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAE 114
           M+LFP    N+   N+   P  S  P +  +++M  E + AQLT+FY G+VI  DDFPAE
Sbjct: 1   MDLFP---TNVTPKNV--TPVDSLSPRI--NNSMVKELETAQLTLFYNGEVIVLDDFPAE 53

Query: 115 KVKEIMAYASKGVXXXXXXXXXXXXXXXXXPSIR-PIVHDLPIARKVSLHRFLEKRKDRI 173
           KV+E+ ++AS                    P  +     D+ IARK SL RF+EKR  R+
Sbjct: 54  KVEELKSFAS----TLKLGLQLFLIGFSHLPDHKFYFFKDMVIARKASLLRFMEKRNVRV 109

Query: 174 SSKAPYQ----ISAPEK 186
           S+K+PYQ     SAP+K
Sbjct: 110 SAKSPYQRSDFDSAPKK 126


>Medtr8g021380.2 | jasmonate zim-domain protein | HC |
           chr8:7686461-7689122 | 20130731
          Length = 270

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 19  FSQTCNLLSQYLKEKGSFGDLTLGMERNVQGSPVTTMELFPMATQN----LKSMNLFYPP 74
           FSQTC+LLSQ+LKEK   GD T      ++    T   L  M   +    L +  +   P
Sbjct: 24  FSQTCSLLSQFLKEKRISGDATPSFFGKMEPKASTKDLLANMQNSDGGLRLNASAIESLP 83

Query: 75  QQSEVPTLVKSSAMGNEPKAAQLTMFYEGQVIGFDDFPAEKVKEIMAYASK 125
           Q  E P + KS+    +PK  QLT+FY G+++ FD F      EIM  A+K
Sbjct: 84  QLVENPCIKKSNTRSTDPKTPQLTIFYSGKMLVFDAFSPSNATEIMELATK 134