Miyakogusa Predicted Gene
- Lj0g3v0243059.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0243059.1 tr|G7JS79|G7JS79_MEDTR Polygalacturonase-like
protein OS=Medicago truncatula GN=MTR_4g124980 PE=4 SV,93.86,0,Pectin
lyase-like,Pectin lyase fold/virulence factor; Parallel beta-helix
repeats,Parallel beta-heli,CUFF.15877.1
(277 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g124980.1 | pectin lyase superfamily protein | HC | chr4:5... 543 e-155
Medtr2g042740.1 | pectin lyase superfamily protein | HC | chr2:1... 501 e-142
Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family p... 244 9e-65
Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family p... 243 1e-64
Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC | c... 240 9e-64
Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family p... 229 2e-60
Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family p... 229 2e-60
Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family p... 224 1e-58
Medtr1g100040.1 | pectin lyase superfamily protein | HC | chr1:4... 214 6e-56
Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family p... 209 2e-54
Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family p... 209 2e-54
Medtr1g100060.1 | pectin lyase superfamily protein | HC | chr1:4... 209 2e-54
Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family p... 205 5e-53
Medtr1g100050.1 | pectin lyase superfamily protein | HC | chr1:4... 205 5e-53
Medtr2g435340.3 | polygalacturonase/glycoside hydrolase family p... 204 8e-53
Medtr2g435340.2 | polygalacturonase/glycoside hydrolase family p... 204 8e-53
Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family p... 204 9e-53
Medtr7g088550.1 | pectin lyase superfamily protein | HC | chr7:3... 201 6e-52
Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family p... 198 5e-51
Medtr1g099850.1 | pectin lyase superfamily protein | HC | chr1:4... 197 1e-50
Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family p... 196 1e-50
Medtr7g114645.1 | pectin lyase superfamily protein, putative | H... 107 2e-23
Medtr6g048610.1 | polygalacturonase | HC | chr6:17584998-1758422... 94 2e-19
Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family p... 92 4e-19
Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 | ... 91 2e-18
Medtr2g049400.1 | pectin lyase superfamily protein | LC | chr2:2... 89 3e-18
Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-1473941... 84 1e-16
Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-4452318... 83 2e-16
Medtr8g065030.1 | pectin lyase superfamily protein | HC | chr8:2... 83 2e-16
Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 ... 83 3e-16
Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family p... 82 4e-16
Medtr8g065010.1 | polygalacturonase plant-like protein | HC | ch... 82 5e-16
Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family p... 82 5e-16
Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-3252202... 81 9e-16
Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 ... 80 3e-15
Medtr1g052315.1 | endo polygalacturonase | HC | chr1:21186740-21... 80 3e-15
Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-2485865... 79 5e-15
Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 ... 79 5e-15
Medtr4g094715.1 | pectin lyase superfamily protein | HC | chr4:3... 79 6e-15
Medtr8g009810.1 | pectin lyase superfamily protein | HC | chr8:2... 79 7e-15
Medtr8g077320.1 | pectin lyase superfamily protein | LC | chr8:3... 79 7e-15
Medtr2g032710.2 | polygalacturonase plant-like protein | HC | ch... 78 8e-15
Medtr2g032710.1 | polygalacturonase plant-like protein | HC | ch... 78 8e-15
Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-1379143... 77 2e-14
Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-1451629... 77 2e-14
Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family p... 77 2e-14
Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family p... 76 4e-14
Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family p... 75 5e-14
Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family p... 75 6e-14
Medtr2g029170.1 | endo-polygalacturonase | HC | chr2:10881421-10... 75 7e-14
Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 ... 74 1e-13
Medtr7g092470.1 | exo-polyalpha-D-galacturonosidase-like protein... 73 3e-13
Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-1165736... 72 5e-13
Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 ... 70 2e-12
Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-3939047... 69 4e-12
Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 | ... 69 5e-12
Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family p... 68 8e-12
Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family p... 68 1e-11
Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 ... 67 2e-11
Medtr2g058640.1 | polygalacturonase 11c, putative | HC | chr2:24... 67 2e-11
Medtr2g083670.1 | pectin lyase superfamily protein | HC | chr2:3... 67 2e-11
Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 ... 67 3e-11
Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 ... 66 4e-11
Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-1355938... 65 7e-11
Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-1473875... 64 1e-10
Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-3273117... 64 2e-10
Medtr7g091840.1 | endo polygalacturonase | HC | chr7:36349369-36... 62 4e-10
Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family ... 62 8e-10
Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family p... 62 8e-10
Medtr7g091850.1 | endo polygalacturonase | HC | chr7:36360735-36... 61 1e-09
Medtr2g058840.1 | polygalacturonase 11c, putative | HC | chr2:24... 59 4e-09
Medtr2g058670.1 | polygalacturonase 11c, putative | HC | chr2:24... 59 4e-09
Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family p... 58 9e-09
Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 ... 57 3e-08
Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-4695913... 55 7e-08
Medtr8g010050.1 | pectin lyase superfamily protein | LC | chr8:2... 55 1e-07
Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-4988630... 54 2e-07
Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 ... 54 2e-07
Medtr2g042760.1 | polygalacturonase-like protein, putative | HC ... 53 3e-07
Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family p... 52 5e-07
Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-4452318... 52 8e-07
Medtr5g090140.1 | pectin lyase superfamily protein | HC | chr5:3... 49 4e-06
>Medtr4g124980.1 | pectin lyase superfamily protein | HC |
chr4:51842179-51838098 | 20130731
Length = 492
Score = 543 bits (1400), Expect = e-155, Method: Compositional matrix adjust.
Identities = 260/277 (93%), Positives = 268/277 (96%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
MWSSDIVI++ITLRDSPFWTLHPYDCKN+TIK VTILAPVFEAPNTDGIDPDSCEDMLIE
Sbjct: 216 MWSSDIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAPNTDGIDPDSCEDMLIE 275
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
DCYISVGDDAIAIKSGWDQYGIAY RPSMNIMIRNLVVRSMVSAG+SIGSEMSGG+SNVT
Sbjct: 276 DCYISVGDDAIAIKSGWDQYGIAYGRPSMNIMIRNLVVRSMVSAGISIGSEMSGGISNVT 335
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
VENL VWDSRRGVRIKTA GRGGYVRQITYRN+TFENVRVGIVMKTDYNEHPDDGYDPTA
Sbjct: 336 VENLLVWDSRRGVRIKTAPGRGGYVRQITYRNITFENVRVGIVMKTDYNEHPDDGYDPTA 395
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQV 240
LP IRDISFT V+GHGVRVPVRIHGSE IPVRNVTFRDMSVGLTYKKKHIFQCAFV G+V
Sbjct: 396 LPVIRDISFTNVYGHGVRVPVRIHGSEEIPVRNVTFRDMSVGLTYKKKHIFQCAFVHGRV 455
Query: 241 IGTIFPSPCENLDRYNEQGQLVKHSASQNVTDIDYDF 277
IGTIFPSPCENLDRYNEQGQLVKHS SQNVTDIDYDF
Sbjct: 456 IGTIFPSPCENLDRYNEQGQLVKHSMSQNVTDIDYDF 492
>Medtr2g042740.1 | pectin lyase superfamily protein | HC |
chr2:18636698-18641564 | 20130731
Length = 474
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/276 (85%), Positives = 257/276 (93%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+SSDIVISNITLRDSPFWTLHPYDCKN+TIKNVTILAPV+ APNTDGIDPDSCEDMLIE
Sbjct: 198 MYSSDIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIE 257
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
DCYISVGDDAIAIKSGWDQYGIAYA+PS NI+IRNLVVRS VSAG+SIGSEMSGGVSNVT
Sbjct: 258 DCYISVGDDAIAIKSGWDQYGIAYAKPSKNIIIRNLVVRSNVSAGISIGSEMSGGVSNVT 317
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
+EN+ VW+SRR +RIKTA GRGGYVRQITYRN+TF NVRVGIV+KTDYNEHPDDGYDPTA
Sbjct: 318 IENILVWESRRAIRIKTAPGRGGYVRQITYRNITFHNVRVGIVIKTDYNEHPDDGYDPTA 377
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQV 240
LP +RDISFT + G GVRVPVRI GSE IPVRNVTF DM+VG+TYKKKHIFQCAFVEG+V
Sbjct: 378 LPILRDISFTNIRGEGVRVPVRITGSEEIPVRNVTFHDMNVGITYKKKHIFQCAFVEGRV 437
Query: 241 IGTIFPSPCENLDRYNEQGQLVKHSASQNVTDIDYD 276
IGTIFP PC N D+YNEQG+LVK + SQNVTDIDY+
Sbjct: 438 IGTIFPKPCRNFDQYNEQGELVKQAVSQNVTDIDYE 473
>Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 244 bits (622), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 172/275 (62%), Gaps = 10/275 (3%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M S+ ++ISN+T +SPFWT+HP C +T++NVTILAP+ ++PNTDGIDPDS +D+ IE
Sbjct: 185 MNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPL-DSPNTDGIDPDSSDDVCIE 243
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
DCYIS GDD IAIKSGWD+YGIA+ RPS NI+I LV ++ SAG++IGSEMSGGVS+V
Sbjct: 244 DCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVSDVR 303
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
E++ +DS +RIKT+ GRGGYVR I N+T NV + I Y +HPDD YDP A
Sbjct: 304 AEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNA 363
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQV 240
LP I I+ V G + I G E N+ +++ L + + C+ + G
Sbjct: 364 LPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNIT--LNVSSNYPWNCSNIRGYS 421
Query: 241 IGTIFPSPCENL------DRYNEQGQLVKHSASQN 269
+FP CE L D ++ L H S N
Sbjct: 422 -DMVFPEACEPLKERIFPDHCSDCYYLSNHRQSSN 455
>Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 243 bits (621), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/275 (46%), Positives = 172/275 (62%), Gaps = 10/275 (3%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M S+ ++ISN+T +SPFWT+HP C +T++NVTILAP+ ++PNTDGIDPDS +D+ IE
Sbjct: 185 MNSTRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPL-DSPNTDGIDPDSSDDVCIE 243
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
DCYIS GDD IAIKSGWD+YGIA+ RPS NI+I LV ++ SAG++IGSEMSGGVS+V
Sbjct: 244 DCYISTGDDLIAIKSGWDEYGIAFGRPSTNIVIHRLVGKTHTSAGIAIGSEMSGGVSDVR 303
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
E++ +DS +RIKT+ GRGGYVR I N+T NV + I Y +HPDD YDP A
Sbjct: 304 AEDIHFYDSYTAIRIKTSPGRGGYVRNIYVTNMTLANVDIAIRFTGSYGDHPDDAYDPNA 363
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQV 240
LP I I+ V G + I G E N+ +++ L + + C+ + G
Sbjct: 364 LPVIEKITIEDVIGENITKAGLIEGIEGDNFVNICLSNIT--LNVSSNYPWNCSNIRGYS 421
Query: 241 IGTIFPSPCENL------DRYNEQGQLVKHSASQN 269
+FP CE L D ++ L H S N
Sbjct: 422 -DMVFPEACEPLKERIFPDHCSDCYYLSNHRQSSN 455
>Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC |
chr3:44026955-44022720 | 20130731
Length = 775
Score = 240 bits (613), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 170/258 (65%), Gaps = 13/258 (5%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M S ++++SN+T R+SPFWT+HP C N+ IK +TILAP+ APNTDGIDPDS ++ IE
Sbjct: 218 MNSENVLVSNLTFRNSPFWTIHPVYCSNVVIKGMTILAPL-NAPNTDGIDPDSSTNVCIE 276
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
D YI GDD +AIKSGWDQYGIA A+PS NI++ + + +GV IGSEMSGG+SN+T
Sbjct: 277 DNYIESGDDLVAIKSGWDQYGIAVAKPSTNIIVSRVSGTTPTCSGVGIGSEMSGGISNIT 336
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
+ENL VW+S GVRIK+ GRGGY++ ++ N+ E V++ I N+HPDDG+DP A
Sbjct: 337 IENLHVWNSAAGVRIKSDNGRGGYIKNVSISNIRMERVKIPIRFSRGSNDHPDDGWDPKA 396
Query: 181 LPEIRDISFTTVHG-HGVRVPVR--IHGS--EAIPVRNVTFRDMSVGLTYKKKHIFQCAF 235
+P +DI + V + + PV + GS E + +N+TF +++ T+ C +
Sbjct: 397 VPRFKDILISNVISVNSTKAPVLEGVKGSSFEGLCFKNITFLGVALSATW------HCEY 450
Query: 236 VEGQVIGTIFPSPCENLD 253
V G G +FP PC L
Sbjct: 451 VAGFTNG-VFPLPCPELQ 467
>Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38488435-38484789 | 20130731
Length = 510
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 165/252 (65%), Gaps = 5/252 (1%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S++++ISN T +SPFWT+HP C N+T++NVTI+ P F +PNTDGIDPDS +++ IEDC
Sbjct: 226 STEVLISNATFLNSPFWTIHPVYCSNVTVQNVTIIVP-FGSPNTDGIDPDSSDNVCIEDC 284
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVE 122
YIS GDD I+IKSGWD+YGI++ RPS NI I L R+ SAG++IGSEMSGGVS V E
Sbjct: 285 YISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRT-TSAGIAIGSEMSGGVSEVYAE 343
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
+++++DS+ +RIKT+ GRGGYVR + N+T NV + I Y EHPDD YD ALP
Sbjct: 344 DIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEHPDDSYDRDALP 403
Query: 183 EIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVIG 242
I I+ V G ++ I G + ++ +++ L K + + C+ V+G
Sbjct: 404 VIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNIT--LNVSKNNPWNCSDVKGYS-E 460
Query: 243 TIFPSPCENLDR 254
+ P CE L+
Sbjct: 461 LVSPESCEQLNE 472
>Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38486723-38484669 | 20130731
Length = 406
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 165/252 (65%), Gaps = 5/252 (1%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S++++ISN T +SPFWT+HP C N+T++NVTI+ P F +PNTDGIDPDS +++ IEDC
Sbjct: 122 STEVLISNATFLNSPFWTIHPVYCSNVTVQNVTIIVP-FGSPNTDGIDPDSSDNVCIEDC 180
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVE 122
YIS GDD I+IKSGWD+YGI++ RPS NI I L R+ SAG++IGSEMSGGVS V E
Sbjct: 181 YISTGDDLISIKSGWDEYGISFGRPSTNISIHRLTGRT-TSAGIAIGSEMSGGVSEVYAE 239
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
+++++DS+ +RIKT+ GRGGYVR + N+T NV + I Y EHPDD YD ALP
Sbjct: 240 DIYIFDSKSAIRIKTSPGRGGYVRNVYISNMTLINVDIAIRFTGLYGEHPDDSYDRDALP 299
Query: 183 EIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVIG 242
I I+ V G ++ I G + ++ +++ L K + + C+ V+G
Sbjct: 300 VIERITVVNVIGENIKRAGLIQGIKGDNFVDICLSNIT--LNVSKNNPWNCSDVKGYS-E 356
Query: 243 TIFPSPCENLDR 254
+ P CE L+
Sbjct: 357 LVSPESCEQLNE 368
>Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:41331762-41334923 | 20130731
Length = 470
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 160/250 (64%), Gaps = 3/250 (1%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+S +I ISN+TL +SP W +HP NI ++ +TILAPV +PNTDGI+PDSC + IE
Sbjct: 186 MYSDNIQISNLTLVNSPSWNVHPVYSSNIIVQGITILAPV-NSPNTDGINPDSCTNTRIE 244
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
DCYI GDD +A+KSGWD+YGIAY P+ ++IR L S SA +++GSEMSGG+ +V
Sbjct: 245 DCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPTSAVIALGSEMSGGIQDVR 304
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
E++ +S GVRIKTA GRGGYV+ I R +T + ++ M DY H D+ YDP A
Sbjct: 305 AEDIVAINSESGVRIKTAVGRGGYVKDIYVRRMTMKTMKWAFWMTGDYGSHADNNYDPNA 364
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHI-FQCAFVEGQ 239
+P +++I++ + V + ++ G P + ++++GL K K + + C ++ G
Sbjct: 365 IPVVQNINYRDMVAENVTMAAKLEGISNAPFTGICISNVTIGLAKKAKKLPWNCTYIAGV 424
Query: 240 VIGTIFPSPC 249
G + P+PC
Sbjct: 425 SSG-VTPAPC 433
>Medtr1g100040.1 | pectin lyase superfamily protein | HC |
chr1:45076650-45074575 | 20130731
Length = 481
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 157/253 (62%), Gaps = 3/253 (1%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+S I ISN+TL +SP W +HP NI I +TILAPV + PNTDGIDPDSC ++ IE
Sbjct: 198 MYSDQIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPV-DIPNTDGIDPDSCTNVRIE 256
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
D YI GDD IAIKSGWD+YGI + +PS I+IR L S SA V++GSEMSGG+ +V
Sbjct: 257 DNYIVSGDDCIAIKSGWDEYGIKFGKPSQQIIIRRLTCISPKSAMVALGSEMSGGIQDVR 316
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
VE++ + VRIKTA GRG YV+ I + + + ++ M Y HPD+G+DP A
Sbjct: 317 VEDVTAIKTESAVRIKTAIGRGAYVKDIFVKGMNLDTMKYVFWMTGSYKSHPDNGFDPNA 376
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLT-YKKKHIFQCAFVEGQ 239
LP+I +I++ V V + ++ G P + + ++ ++ +KKK + C V G
Sbjct: 377 LPKISEINYRDVTAKNVTIAGKLDGISNDPFTGICVSNATIEMSAHKKKLPWNCTDVSG- 435
Query: 240 VIGTIFPSPCENL 252
V + P+PCE L
Sbjct: 436 VTSNVSPTPCELL 448
>Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:29762570-29765948 | 20130731
Length = 483
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 156/253 (61%), Gaps = 3/253 (1%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+S I ISN+TL +SP W +HP NI I+ +TI+AP+ +PNTDGI+PDSC + IE
Sbjct: 197 MFSDSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPI-SSPNTDGINPDSCTNTKIE 255
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
DCYI GDD +A+KSGWD+YGI + P+ ++IR L S SA +++GSEMSGG+ +V
Sbjct: 256 DCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPFSATIALGSEMSGGIQDVR 315
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
E++ + GVRIKTA GRGGYV+ I + T ++ M DYN H D +DP A
Sbjct: 316 AEDITAIRTESGVRIKTAVGRGGYVKDIYVKRFTMHTMKWAFKMTGDYNSHADTHFDPNA 375
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYK-KKHIFQCAFVEGQ 239
LPEI +I++ V V + R G P + + ++++G+ K KK + C +EG
Sbjct: 376 LPEIANINYRDVVAENVTIAARFQGISNDPFKGICIANVTLGMAVKAKKRSWTCTDIEGM 435
Query: 240 VIGTIFPSPCENL 252
G + P PC+ L
Sbjct: 436 TSG-VTPPPCDLL 447
>Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr5:39275416-39270733 | 20130731
Length = 450
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 154/253 (60%), Gaps = 6/253 (2%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S DI+ISN+ +DSPFW +HP C N+ I+ TILAP ++PNTDGIDPDS ++ IED
Sbjct: 189 SKDIIISNVIFKDSPFWNIHPVYCSNVVIRFATILAPR-DSPNTDGIDPDSSSNVCIEDS 247
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVE 122
YIS GDD +A+KSGWD+YGIAY R S NI IR V S AG+++GSE SGGV N+ E
Sbjct: 248 YISTGDDLVAVKSGWDEYGIAYGRSSSNITIRR-VSGSSPFAGIAVGSETSGGVENILAE 306
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
++ +++ G+ IKT GRGGY++ I N+ EN R GI + D +H DD YD ALP
Sbjct: 307 HINLYNMGIGIHIKTNIGRGGYIKNINVSNVYIENARKGIKISGDVGDHADDKYDSNALP 366
Query: 183 EIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMS---VGLTYKKKHIFQCAFVEGQ 239
++ I+ V G V I G + P ++ D++ V T + +QC+ V G
Sbjct: 367 IVKGITMANVWGVKVLQAGLIKGMKHSPFTDICLSDINLHGVNGTRSRTPSWQCSDVSGV 426
Query: 240 VIGTIFPSPCENL 252
+ + P PC L
Sbjct: 427 AL-QVSPWPCSEL 438
>Medtr1g100060.1 | pectin lyase superfamily protein | HC |
chr1:45084624-45082095 | 20130731
Length = 516
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 157/253 (62%), Gaps = 3/253 (1%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+S I ISN+TL +SP W +HP NI I +TILAPV + PNTDGIDPDS ++LIE
Sbjct: 235 MYSDQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPV-DVPNTDGIDPDSSTNVLIE 293
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
D YI GDD IAIKSGWD+YGI +PS NI++R L S SA V++GSEMSGG+ +V
Sbjct: 294 DNYIVSGDDCIAIKSGWDEYGIKVGKPSQNIIVRRLTCISPKSALVALGSEMSGGIQDVR 353
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
+E++ ++ VRIK+A GRG +V+ I + + ++ M Y +HPD+G+DP A
Sbjct: 354 IEDVTAINTESAVRIKSAVGRGAFVKDIFVKGMDLNTLKYVFWMTGSYGDHPDNGFDPNA 413
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLT-YKKKHIFQCAFVEGQ 239
LP+I I++ V V + ++ G P + ++++ ++ +KKK + C + G
Sbjct: 414 LPKISGINYRDVTAKNVTIAGKVEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISG- 472
Query: 240 VIGTIFPSPCENL 252
V + P PCE L
Sbjct: 473 VTSNVVPKPCELL 485
>Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:16895715-16889169 | 20130731
Length = 451
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 162/265 (61%), Gaps = 6/265 (2%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S +I+ISN+ ++SPFW +HP C N+ ++ VTILAP ++PNTDGIDPDS ++ IED
Sbjct: 191 SRNIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPR-DSPNTDGIDPDSSSNVCIEDS 249
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVE 122
YIS GDD +A+KSGWD YGI+Y RPS +I IR + S AG+++GSE SGGV NV E
Sbjct: 250 YISTGDDLVAVKSGWDAYGISYGRPSNDITIRRITGSSPF-AGIAVGSETSGGVQNVLAE 308
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
++ +++ G+ IKT GRGG ++ IT N+ EN R GI + D +HPD+ ++P ALP
Sbjct: 309 HINLFNMGVGIHIKTNIGRGGLIKNITVSNVYIENSRQGIKIAGDVGDHPDENFNPNALP 368
Query: 183 EIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSV-GLTYKKKH-IFQCAFVEGQV 240
++ I+ +V G V IHG P + F D+++ G T + ++C+ V G
Sbjct: 369 VVKGITIKSVWGVKVLQAGLIHGLRNSPFTEICFYDINLHGETGSGRSPPWKCSDVFG-F 427
Query: 241 IGTIFPSPCENLDRYNEQGQLVKHS 265
+ P PC L E G +S
Sbjct: 428 SKQVSPWPCSQLSS-QEPGSCTNYS 451
>Medtr1g100050.1 | pectin lyase superfamily protein | HC |
chr1:45079785-45077811 | 20130731
Length = 473
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 156/255 (61%), Gaps = 3/255 (1%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+S I ISN+TL +SP W +HP NI I +TILAPV ++PNTDGI+PDSC ++ IE
Sbjct: 192 MYSDQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPV-DSPNTDGINPDSCTNVRIE 250
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
D +I GDD IAIKSGWD+YGI PS I+IR L S SA V++GSEMSGG+ +V
Sbjct: 251 DNFIVSGDDCIAIKSGWDEYGIKVGMPSQQIIIRRLTCISPDSAMVALGSEMSGGIQDVR 310
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
+E++ ++ +RIK+A GRG +V+ I + + ++ M Y +HPD+G+DP A
Sbjct: 311 IEDVTAINTESAIRIKSAVGRGAFVKDIFVKGMDLNTMKYVFWMTGSYGDHPDNGFDPNA 370
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLT-YKKKHIFQCAFVEGQ 239
LP+I I++ V V + ++ G P + ++++ ++ +KKK + C + G
Sbjct: 371 LPKISGINYRDVTAKNVTIAGKLEGISNDPFTGICVSNVTIEMSAHKKKLPWNCTDISG- 429
Query: 240 VIGTIFPSPCENLDR 254
V + P PCE L
Sbjct: 430 VTSNVVPKPCELLQE 444
>Medtr2g435340.3 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610594-13606829 | 20130731
Length = 387
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 155/251 (61%), Gaps = 3/251 (1%)
Query: 3 SSD-IVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIED 61
SSD +V+SN+T ++P +++HP C N+ I+N++I P E+P T GI PDS ++ IED
Sbjct: 115 SSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPP-ESPYTAGIVPDSSNNVCIED 173
Query: 62 CYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTV 121
C++S+G DAI++KSGWDQYGI Y RPS + IR + +R+ + +S G+EMSGG+S V +
Sbjct: 174 CFVSIGFDAISLKSGWDQYGINYGRPSEKVHIRRVHLRAFTGSAISFGTEMSGGISKVLI 233
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTAL 181
E++ +++S G+ +T GRGGY+++I ++ ENV I K + HPDD +DP AL
Sbjct: 234 EHVNIFNSNSGIEFRTTKGRGGYIKEIALSHIEMENVHTAISAKGNSGSHPDDKFDPKAL 293
Query: 182 PEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVI 241
P + I+ + G + + + G E P N+ ++++ ++C+ V G
Sbjct: 294 PLLDHITLKDITGKNITIAGSLSGIEESPFTNICLSNITLSTNSVSSSKWECSNVSG-FS 352
Query: 242 GTIFPSPCENL 252
++ P PC+ L
Sbjct: 353 DSVLPKPCQEL 363
>Medtr2g435340.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610594-13606829 | 20130731
Length = 387
Score = 204 bits (519), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 155/251 (61%), Gaps = 3/251 (1%)
Query: 3 SSD-IVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIED 61
SSD +V+SN+T ++P +++HP C N+ I+N++I P E+P T GI PDS ++ IED
Sbjct: 115 SSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPP-ESPYTAGIVPDSSNNVCIED 173
Query: 62 CYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTV 121
C++S+G DAI++KSGWDQYGI Y RPS + IR + +R+ + +S G+EMSGG+S V +
Sbjct: 174 CFVSIGFDAISLKSGWDQYGINYGRPSEKVHIRRVHLRAFTGSAISFGTEMSGGISKVLI 233
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTAL 181
E++ +++S G+ +T GRGGY+++I ++ ENV I K + HPDD +DP AL
Sbjct: 234 EHVNIFNSNSGIEFRTTKGRGGYIKEIALSHIEMENVHTAISAKGNSGSHPDDKFDPKAL 293
Query: 182 PEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVI 241
P + I+ + G + + + G E P N+ ++++ ++C+ V G
Sbjct: 294 PLLDHITLKDITGKNITIAGSLSGIEESPFTNICLSNITLSTNSVSSSKWECSNVSG-FS 352
Query: 242 GTIFPSPCENL 252
++ P PC+ L
Sbjct: 353 DSVLPKPCQEL 363
>Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610605-13606670 | 20130731
Length = 452
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 155/251 (61%), Gaps = 3/251 (1%)
Query: 3 SSD-IVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIED 61
SSD +V+SN+T ++P +++HP C N+ I+N++I P E+P T GI PDS ++ IED
Sbjct: 180 SSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPP-ESPYTAGIVPDSSNNVCIED 238
Query: 62 CYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTV 121
C++S+G DAI++KSGWDQYGI Y RPS + IR + +R+ + +S G+EMSGG+S V +
Sbjct: 239 CFVSIGFDAISLKSGWDQYGINYGRPSEKVHIRRVHLRAFTGSAISFGTEMSGGISKVLI 298
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTAL 181
E++ +++S G+ +T GRGGY+++I ++ ENV I K + HPDD +DP AL
Sbjct: 299 EHVNIFNSNSGIEFRTTKGRGGYIKEIALSHIEMENVHTAISAKGNSGSHPDDKFDPKAL 358
Query: 182 PEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVI 241
P + I+ + G + + + G E P N+ ++++ ++C+ V G
Sbjct: 359 PLLDHITLKDITGKNITIAGSLSGIEESPFTNICLSNITLSTNSVSSSKWECSNVSG-FS 417
Query: 242 GTIFPSPCENL 252
++ P PC+ L
Sbjct: 418 DSVLPKPCQEL 428
>Medtr7g088550.1 | pectin lyase superfamily protein | HC |
chr7:34506744-34504347 | 20130731
Length = 476
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/258 (44%), Positives = 156/258 (60%), Gaps = 6/258 (2%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
++S I ISN+TL +SP W +HP NI IK +TILAPV ++PNTDGIDPDS ++ IE
Sbjct: 192 LYSDQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPV-DSPNTDGIDPDSSTNVRIE 250
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
D YI GDD IAIKSGWDQYGI + +PS I+IR L S SA +++GSEMSGG+ NV
Sbjct: 251 DNYIVSGDDCIAIKSGWDQYGIKFGKPSKQIIIRRLTCISPDSAMIALGSEMSGGIENVR 310
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENV-RVGIVMKTDYNEHPDDGYDPT 179
VE++ ++ VRIK+A GRGGYV+ I + + + R + Y +HPD+G+DP
Sbjct: 311 VEDVTAINTESAVRIKSAVGRGGYVKDIFVKGVKLNTILRYVFWLTGSYGDHPDNGFDPK 370
Query: 180 ALPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHI---FQCAFV 236
ALP+I I F V V V ++ G P + ++++ L+ KK + C V
Sbjct: 371 ALPKITGIIFRDVIAKNVTVAGQLEGISNDPFTGICISNVTIELSELKKKKKLPWNCTDV 430
Query: 237 EGQVIGTIFPSPCENLDR 254
G V + P PC+ L
Sbjct: 431 SG-VTSNVVPKPCDLLSE 447
>Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:11065754-11061041 | 20130731
Length = 479
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 164/276 (59%), Gaps = 13/276 (4%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+S +I ISN+TL DSP W +HP NI IK +TI+AP+ +PNTDGI+PDSC + IE
Sbjct: 197 MFSDNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPI-RSPNTDGINPDSCTNTKIE 255
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
DCYI GDD +A+KSGWD+YGI + P+ ++IR L S SA +++GSEMSGG+ +V
Sbjct: 256 DCYIVSGDDCVAVKSGWDEYGIKFGWPTKQLVIRRLTCISPYSATIALGSEMSGGIQDVR 315
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
E++ + G+RIKTA GRGGYV+ I + +T ++ + +Y H D Y+ +A
Sbjct: 316 AEDITAVHTESGIRIKTAVGRGGYVKDIYVKKMTMHTMKWAFWITGNYGSHADKNYNHSA 375
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYK-KKHIFQCAFVEGQ 239
LPEI++I + + V + + G P + ++++ + K KK + C +EG
Sbjct: 376 LPEIKNIHYRDMVADNVSMAGNLEGISNDPFTGICISNVTITMAAKAKKQPWTCNDIEGI 435
Query: 240 VIGTIFPSPCENLDRYNEQGQLVKHSASQNVTDIDY 275
G + P PC D EQG+ +N+ D D+
Sbjct: 436 TSG-VTPKPC---DLLPEQGK-------ENIRDCDF 460
>Medtr1g099850.1 | pectin lyase superfamily protein | HC |
chr1:45068986-45067030 | 20130731
Length = 475
Score = 197 bits (501), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 152/253 (60%), Gaps = 3/253 (1%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+S I ISN+TL +SP W +HP NI I +TILAPV + PNTDGIDPDSC ++LIE
Sbjct: 197 MYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPV-DVPNTDGIDPDSCTNVLIE 255
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
D YI GDD IAIKSG D YGI +PS I++R L S SA V++GSEMSGG+ ++
Sbjct: 256 DNYIVSGDDCIAIKSGLDGYGIKVGKPSQKIIVRRLTCISPKSAMVALGSEMSGGIQDIR 315
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
+E++ ++ VRIKTA GRG YV+ I + + ++ M Y H ++G+DP A
Sbjct: 316 IEDITAINTESAVRIKTAVGRGAYVKDIFVKGMNLNTMKYVFWMTGAYKSHAENGFDPKA 375
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHI-FQCAFVEGQ 239
LP+I I++ + V + ++ G P + ++++ ++ +K ++ + C V G
Sbjct: 376 LPKISGINYRDIIAKNVTIAGQLDGISNDPFTGICISNVTIEMSAQKNNLPWNCTDVSG- 434
Query: 240 VIGTIFPSPCENL 252
V P PC+ L
Sbjct: 435 VASNAVPKPCDML 447
>Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr4:49981535-49985560 | 20130731
Length = 459
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 155/251 (61%), Gaps = 2/251 (0%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S+D+V+SN+T ++P + +HP C+N+ I N++I AP E+P T GI PDS + + IEDC
Sbjct: 184 STDVVVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAPP-ESPYTVGIVPDSSDHVCIEDC 242
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVE 122
I+ G DAIA+KSGWD+YGIAY RP+ N+ IR + +++ + ++ GS+MSGG+SNV VE
Sbjct: 243 TIATGYDAIALKSGWDEYGIAYGRPTENVHIRRVHLQASYGSTLAFGSDMSGGISNVFVE 302
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
++ +++S+ G+ +T GRGGY++ I ++ +N+ I HPDD +DP ALP
Sbjct: 303 HVHLYNSKGGIEFRTIRGRGGYMKDIILSDIEMKNIYRAISATGYCGSHPDDKFDPNALP 362
Query: 183 EIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVIG 242
+ F + G + + G + P N+ ++++ + Y ++C+ V G
Sbjct: 363 LLDHFIFQDIIGTNITIAGSFAGLQESPFTNICLSNITLSVNYASSTSWECSNVSG-FSD 421
Query: 243 TIFPSPCENLD 253
++ P PC +LD
Sbjct: 422 SVLPIPCPDLD 432
>Medtr7g114645.1 | pectin lyase superfamily protein, putative | HC |
chr7:47336926-47337240 | 20130731
Length = 104
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 61/80 (76%)
Query: 181 LPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQV 240
+P ++DISFT + GV V V I GS+ IPV NVTF DM+VG+TYK KHIF+ AFV+G V
Sbjct: 25 IPILKDISFTNICDKGVHVHVSIQGSKEIPVGNVTFEDMNVGITYKNKHIFRYAFVDGWV 84
Query: 241 IGTIFPSPCENLDRYNEQGQ 260
IGTIF PC N D+YNEQG+
Sbjct: 85 IGTIFTKPCRNFDQYNEQGE 104
>Medtr6g048610.1 | polygalacturonase | HC | chr6:17584998-17584221 |
20130731
Length = 163
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 83/175 (47%), Gaps = 37/175 (21%)
Query: 53 SCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEM 112
S ++ IEDC I GDD +AIKSGW++YGI + PS +I+I L S SA +++GSEM
Sbjct: 24 SSTNVRIEDCQIVSGDDCVAIKSGWNEYGIQFGMPSQHIIITRLKCVSPDSAMIALGSEM 83
Query: 113 SGGVSNVTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHP 172
S +RIKTA GRG YV K Y HP
Sbjct: 84 S------------------AIRIKTAVGRGAYV-------------------KGSYGSHP 106
Query: 173 DDGYDPTALPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKK 227
D +DP ALP I +I+ + V V ++ G P +V ++++ KK
Sbjct: 107 DPSFDPKALPNITEINHSDVMADNVTYSEKLEGISNDPFTDVYISNVTIHNVGKK 161
>Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:19058555-19056081 | 20130731
Length = 400
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 22/198 (11%)
Query: 6 IVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYIS 65
+ ISN+ +SP + CKN +I N+ I+AP +PNTDGID S +++I + I
Sbjct: 163 LTISNLNHINSPRNHISIDSCKNASISNLQIIAPE-NSPNTDGIDIASSSNIIINNLSIK 221
Query: 66 VGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTV 121
GDD IAI SG + I V G+S+GS GG V V V
Sbjct: 222 TGDDCIAINSGSN-------------FINITGVLCGPGHGISVGSLGKGGEYATVEEVHV 268
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA- 180
++ + G RIKT G GY R+ITY N+ V+ I++ +YN H YD ++
Sbjct: 269 KDCTFTGTTNGARIKTWKGGSGYARKITYENIKLVEVKNPIIINQNYNPHI---YDSSSE 325
Query: 181 LPEIRDISFTTVHGHGVR 198
+ ++ D++F +HG V
Sbjct: 326 VVKVSDVTFLNIHGTSVN 343
>Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 425
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 21/258 (8%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S + +S IT+++S L C N+ + ++T +P ++PNTDGI + +D++I
Sbjct: 171 SDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSP-GDSPNTDGIHLQNSQDVVISGS 229
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSN 118
+S GDD ++I++G NI++ N V G+SIGS VSN
Sbjct: 230 TLSCGDDCVSIQTG-----------CSNILVHN--VNCGPGHGISIGSLGKENTKACVSN 276
Query: 119 VTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDP 178
VTV ++ + ++ GVRIKT G G V+ I + N+ +V+ I++ Y + +
Sbjct: 277 VTVRDVTLQNTLTGVRIKTWQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDG-GKCRNV 335
Query: 179 TALPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEG 238
T+ + I +T VHG + P+ S+++P + +T + + + F C G
Sbjct: 336 TSAVAVSSIHYTNVHGTYTKEPIYFACSDSLPCKGITLDTIKLESSQNSNVPF-CWKAYG 394
Query: 239 QVIGTIFPSPCENLDRYN 256
++ I P P + L R N
Sbjct: 395 ELKTEIVP-PVDCLQRGN 411
>Medtr2g049400.1 | pectin lyase superfamily protein | LC |
chr2:21772816-21776116 | 20130731
Length = 391
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 21/254 (8%)
Query: 2 WSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIED 61
WS ++++S +T +S + CKN+ IK+V I AP +PNTDGI+ + I
Sbjct: 152 WSKNVLVSGLTSLNSKAIHIAVDHCKNVVIKDVKIRAPS-RSPNTDGINVQFSTGVTISH 210
Query: 62 CYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMS----GGVS 117
I GDD I+I G + ++ I + G+SIGS S GV
Sbjct: 211 STIMTGDDCISINQG-----------TTHVWIDRIACGP--GHGISIGSLGSDSNEAGVE 257
Query: 118 NVTVENLFVWDSRRGVRIKT-AAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGY 176
NVTV + ++ GVRIK+ A GY R I +RNL +NV I++ Y D +
Sbjct: 258 NVTVTDSVFTKTQNGVRIKSWAKPNNGYARDINFRNLIMQNVYYPIIIDQRYCTKTDCPH 317
Query: 177 DPTALPEIRDISFTTVHGHGVR-VPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAF 235
+ + +I +S+ + G V ++ S++ P + +D+++ K C
Sbjct: 318 QNSGV-KISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDINLIYLKGSKTSSSCRN 376
Query: 236 VEGQVIGTIFPSPC 249
G +G + P C
Sbjct: 377 AGGSTLGLVIPKSC 390
>Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-14739416 |
20130731
Length = 534
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 115/229 (50%), Gaps = 19/229 (8%)
Query: 7 VISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISV 66
++ IT+++SP L +C + + +V+I +P ++PNTDGI + +D+LI ++
Sbjct: 282 TVTGITIQNSPQCHLKFDNCNGVLVHDVSISSP-GDSPNTDGIHLQNSKDVLIHSSKLAC 340
Query: 67 GDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVE 122
GDD I+I++G N+ + N V G+SIGS VSN+TV
Sbjct: 341 GDDCISIQTG-----------CSNVYVHN--VNCGPGHGISIGSLGKDNTRACVSNITVR 387
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
++ + DS GVRIKT G G V+ + + N+ V++ IV+ Y + + T+
Sbjct: 388 DVNIHDSMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDK-RVCTNHTSAV 446
Query: 183 EIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIF 231
+ I++ + G PV S+++P +V+ + + +K H++
Sbjct: 447 SLAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQEKYHLY 495
>Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 451
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 19/250 (7%)
Query: 5 DIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 64
+ + N+T+ +S + C + + +LAP +PNTDGI + + + I D I
Sbjct: 193 SLKVRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPA-SSPNTDGIHISATKGVEIRDSLI 251
Query: 65 SVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGV----SNVT 120
GDD I+I R S + IRN+ G+SIGS V NV
Sbjct: 252 RTGDDCISI-----------VRNSSRVWIRNISCGP--GHGISIGSLGKSNVWEKIQNVI 298
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
V+ +++++ GVRIKT G G+ +IT++N+ ENV I++ Y + + T+
Sbjct: 299 VDGAYLYNTDNGVRIKTWQGGSGFASKITFQNILMENVSNPIIIDQYYCDSRHPCKNQTS 358
Query: 181 LPEIRDISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQ 239
++ +ISF + G ++ S+A P + ++ + + C G
Sbjct: 359 AVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENIFLRSYFGGNTRSYCWQAHGS 418
Query: 240 VIGTIFPSPC 249
G ++P C
Sbjct: 419 AQGYVYPPVC 428
>Medtr8g065030.1 | pectin lyase superfamily protein | HC |
chr8:27313786-27310073 | 20130731
Length = 461
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 21/263 (7%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
SS I + +T+++S C ++ I V + +P ++PNTDGI +++++DC
Sbjct: 196 SSSIKVKGLTIQNSQQMHFTISRCDSVRILGVKVASP-GDSPNTDGIHISESTNVIVQDC 254
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSN 118
I GDD I+I S NI ++ + G+SIGS +G V+
Sbjct: 255 KIGTGDDCISI-----------VNASSNIKMKRIFCGP--GHGISIGSLGKDNSTGVVTK 301
Query: 119 VTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDP 178
V ++ F+ + G+RIKT G GYV+ + ++N+ ENV I++ Y + P +
Sbjct: 302 VILDTAFLKGTTNGLRIKTWQGGAGYVKGVRFQNVRVENVSNPILIDQFYCDSPTSCQNQ 361
Query: 179 TALPEIRDISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVE 237
++ EI +I + V G ++ S+ +P N+ ++ + + C +
Sbjct: 362 SSALEISEIMYQNVSGTTNSAKAIKFDCSDTVPCSNLVLSNVDLEKQDGTVETY-CHSAQ 420
Query: 238 GQVIGTIFPSPCENLDRYNEQGQ 260
G G + PS E L+ ++ Q
Sbjct: 421 GFGYGVVHPSA-ECLNSSDKTSQ 442
>Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 |
20130731
Length = 400
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 118/255 (46%), Gaps = 26/255 (10%)
Query: 5 DIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 64
++++ +T +SP + C I + I+AP E+PNTDGID +++IE+ I
Sbjct: 166 NLILRELTHINSPRNHISLNACHGSHISKLHIIAP-NESPNTDGIDIAESSNIIIENSKI 224
Query: 65 SVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVENL 124
GDD IAI G S +I I + G+S+GS GV +VEN+
Sbjct: 225 ETGDDCIAINHG-----------SNSIYINGIFCGP--GHGISVGSLGRNGVHE-SVENI 270
Query: 125 FVWD-----SRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPT 179
+V + + G RIKT G GY R++T+ ++ +++ +YN YD
Sbjct: 271 YVRNCTFNRTTNGARIKTWIGGNGYARKVTFEDIILIEADNPVIIDQEYNP-----YDSA 325
Query: 180 ALPEIRDISFTTVHGHGV-RVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEG 238
++ D++F + G + + +++H E I N+ +++ + ++ C V G
Sbjct: 326 YAVKVSDVTFRNIRGTSIAKHAIQLHCDEDITCTNIILEGINITSSIGEEVHASCKNVNG 385
Query: 239 QVIGTIFPSPCENLD 253
I PC +L+
Sbjct: 386 VCTSCIPYVPCLSLE 400
>Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45103855-45101037 | 20130731
Length = 462
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 21/225 (9%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
SS++ + + +++SP + C N+ I+++ I AP +PNTDGI + D+ I +
Sbjct: 206 SSNLTVKGLKVKNSPQFNFRFDACNNVHIESIYITAPKI-SPNTDGIHLEYANDVKIYNS 264
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSN 118
IS GDD ++I +G S ++ I+N+ S G+SIGS VSN
Sbjct: 265 VISNGDDCVSIGTG-----------SYDVDIKNITCGP--SHGISIGSLGNHNTKACVSN 311
Query: 119 VTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDP 178
+TV + + S G+RIKT G G V +T+ N+ +VR I++ Y D +
Sbjct: 312 ITVRDSIIKMSDNGIRIKTWQGGSGSVSGVTFNNIHMISVRNPIIID-QYYCLTKDCTNK 370
Query: 179 TALPEIRDISFTTVHG-HGVRV-PVRIHGSEAIPVRNVTFRDMSV 221
T+ + +I +T + G + ++ P+ S+++P N+T ++ +
Sbjct: 371 TSAVSVSNILYTNIKGTYDIKSPPMHFACSDSVPCTNITLSEIEL 415
>Medtr8g065010.1 | polygalacturonase plant-like protein | HC |
chr8:27299002-27295111 | 20130731
Length = 521
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 113/229 (49%), Gaps = 19/229 (8%)
Query: 7 VISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISV 66
++ IT+++SP L +C + + +VTI +P ++PNTDGI + D+LI ++
Sbjct: 269 TVTGITIQNSPQCHLKFDNCNGVLVHDVTISSP-GDSPNTDGIHLQNSRDVLIYKSTMAC 327
Query: 67 GDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVE 122
GDD I+I++G N+ + N V G+SIG VSN+TV
Sbjct: 328 GDDCISIQTG-----------CSNVYVHN--VDCGPGHGISIGGLGKDNTRACVSNITVR 374
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
++ + ++ GVRIKT G G V+ + + N+ V+V I++ Y + + + TA
Sbjct: 375 DVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSQVQVPIIIDQFYCDK-RNCKNQTAAV 433
Query: 183 EIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIF 231
+ I++ + G PV S+++P +V+ + + K H++
Sbjct: 434 ALTGINYEGIKGTYTVKPVHFACSDSLPCIDVSLTSVELQPVQDKYHLY 482
>Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38659765-38662894 | 20130731
Length = 477
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 21/225 (9%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
SS++ + + +++SP + C+++ ++++ I AP +PNTDGI ++ D+ I +
Sbjct: 221 SSNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPAL-SPNTDGIHIENTNDVKIYNS 279
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSN 118
+S GDD ++I SG ++ I+N+ G+SIGS VSN
Sbjct: 280 VVSNGDDCVSIGSG-----------CYDVDIKNITCGP--GHGISIGSLGNHNSRACVSN 326
Query: 119 VTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDP 178
+TV + + S GVRIKT G G V +T+ N+ + V+ I++ Y D
Sbjct: 327 ITVRDSVIRVSDNGVRIKTWQGGSGSVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCSNKT 386
Query: 179 TALPEIRDISFTTVHG-HGVR-VPVRIHGSEAIPVRNVTFRDMSV 221
+A+ + DI +T++ G + +R P+ S++IP N+T D+ +
Sbjct: 387 SAV-FVSDIVYTSIKGTYDIRHPPMHFACSDSIPCTNLTLSDIEL 430
>Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-32522029 |
20130731
Length = 374
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 121/257 (47%), Gaps = 29/257 (11%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S +I+IS +T +S + + C+N+ ++ V I+A +PNTDGI + I +
Sbjct: 136 SKNIMISGLTSMNSQMFHIVFNGCENVKMQGVNIMA-AGNSPNTDGIHVQMSSHVTIVNS 194
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSN 118
I GDD I+I G + N+ I N+ G+SIGS GV N
Sbjct: 195 KIRTGDDCISIGPG-----------TSNLWIENIACGP--GHGISIGSLGWKLNEPGVQN 241
Query: 119 VTVENLFVWDSRRGVRIKTAAGR--GGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGY 176
VTV+ + ++ GVRIK+ GR G+VR I +++ NV+ IV+ D N P++
Sbjct: 242 VTVKTVTFTGTQNGVRIKS-WGRPSNGFVRNIFFQDAIMVNVQNPIVI--DQNYCPNNKG 298
Query: 177 DPTALPEIR--DISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHI-FQ 232
P I+ +++ +HG +V V+ S P + +D V LTYK +
Sbjct: 299 CPGQASGIKVSGVTYQNIHGTSATQVAVKFDCSSKYPCSGIKMKD--VKLTYKNQVAEAS 356
Query: 233 CAFVEGQVIGTIFPSPC 249
C G +G++ P C
Sbjct: 357 CNHAGGAALGSVQPESC 373
>Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 |
20130731
Length = 437
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 15/246 (6%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+++ + I R++ L C N+ N+ + AP +PNTDGI +++ I +
Sbjct: 200 NNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAP-GHSPNTDGIHITHSQNVFITNST 258
Query: 64 ISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVR--SMVSAGVSIGSEMSGGVSNVTV 121
I GDD I+I SG S N+ ++ +S G G VSNV V
Sbjct: 259 IGTGDDCISIVSG-----------SKNVRATDITCGPGHGISIGSLGGGNTQAEVSNVEV 307
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTAL 181
+ + GVRIKT G GY R I + N+ NV I++ Y + + +
Sbjct: 308 NRATLIGTTNGVRIKTWQGGSGYARNIKFINIVVRNVTNPIIIDQKYCDQKKKCQEQNSA 367
Query: 182 PEIRDISFTTVHGHGV-RVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQV 240
E+ ++ + + G V +++ S+A+P + + +D+ + K I +C V+
Sbjct: 368 VELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVKITGENIKDTIAKCDNVKYSN 427
Query: 241 IGTIFP 246
G FP
Sbjct: 428 SGMFFP 433
>Medtr1g052315.1 | endo polygalacturonase | HC |
chr1:21186740-21183250 | 20130731
Length = 449
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 26/268 (9%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+++V+ ++ +++ + + N+ + +T+ AP ++PNTDGI + +++ I +
Sbjct: 195 NNLVVEDLNVKNGQQIHVQFQNSANVRVSGLTVTAPE-DSPNTDGIHVTNTQNIQISNSI 253
Query: 64 ISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSA---GVSIGSEMSGG----V 116
I GDD I+I +G +NL + G+SIGS GG V
Sbjct: 254 IGTGDDCISIVNG----------------TKNLKATDITCGPGHGISIGSLGEGGSKEFV 297
Query: 117 SNVTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGY 176
S +TV + + GVRIKT G G I ++N+ ENV I++ +Y +
Sbjct: 298 SGITVNGAKLSRTTNGVRIKTWQGGSGSASNIKFQNIQMENVTNPIIIDQNYCDQQSPCQ 357
Query: 177 DPTALPEIRDISFTTVHGHGVR-VPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAF 235
+ +IR++ + + G V ++ + S+ P + + +++ + L + C
Sbjct: 358 KQKSAVQIRNVLYQNIKGTSASDVAMQFNCSQNFPCQGILLQNIGLELEGGGEAKASCNN 417
Query: 236 VEGQVIGTIFPSPCENLDRYNEQGQLVK 263
V+ G + PS C ++ +E G K
Sbjct: 418 VKLSYRGNVSPS-CNYIEEMHELGGFGK 444
>Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-24858654 |
20130731
Length = 444
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 5 DIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 64
++ + N+ +DS + C N+ + N+ + AP ++PNTDGI +++ I +C I
Sbjct: 207 NLKVKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPE-DSPNTDGIHVAETQNIDIINCDI 265
Query: 65 SVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVT 120
GDD I+I SG S N+ R + + G+SIGS VSNV
Sbjct: 266 GTGDDCISIVSG-----------SKNV--RAIDITCGPGHGISIGSLGADNSEAEVSNVV 312
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
V + + GVRIKT G GY R I + N+ +NV +++ Y + + +
Sbjct: 313 VNRAALTGTTNGVRIKTWQGGSGYARNIKFMNIKMQNVTNPVIIDQYYCDQTEPCQERNK 372
Query: 181 LPEIRDISFTTVHGHGV-RVPVRIHGSEAIPVRNVTFRDM 219
++ + + + G + ++ + S ++P R + +D+
Sbjct: 373 AVQLSQVLYQNIRGTSASEIAIKFNCSRSVPCREIYLQDV 412
>Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 |
20130731
Length = 292
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 105/250 (42%), Gaps = 41/250 (16%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+D+ +SN+ + +SP + C T +V+I +P +PNTDG D D+ IE+
Sbjct: 77 NDLSVSNLRITNSPSSHVSINMCNRTTFSHVSINSPA-TSPNTDGFDISFSTDIRIENSN 135
Query: 64 ISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNV 119
I GDD IA+ G + I V G+S+GS + VS+V
Sbjct: 136 IKSGDDCIAVNGGSN-------------FINVTGVTCGPGHGISVGSLGKKRTNDQVSDV 182
Query: 120 TVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPT 179
V N +++ G RIKT G GY R ITY + NV+ I++ YN+
Sbjct: 183 HVRNCTFKETQNGARIKTVPGGSGYARHITYDQIILVNVKNSIIIDQYYND--------- 233
Query: 180 ALPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQ 239
+P+ D+S + V G G+ A D+++ L K QC G
Sbjct: 234 IIPQAGDVSVSDVTYRGFT------GTSA--------NDLAIQLNCGTKTYSQCKNAHGT 279
Query: 240 VIGTIFPSPC 249
TI C
Sbjct: 280 ATNTIPSVTC 289
>Medtr4g094715.1 | pectin lyase superfamily protein | HC |
chr4:38832640-38835379 | 20130731
Length = 461
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 17/223 (7%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
SS++ ++ + + +SP + + C+ + I ++I AP +PNTDGI ++ +D+ I +
Sbjct: 203 SSNLYVNGLKIENSPQFHMIFNGCQGVMINMLSISAPKL-SPNTDGIHVENSKDVGIYNS 261
Query: 63 YISVGDDAIAIKSGWDQYGIA--YARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
IS GDD I+I G IA PS I I +L V + + VSN+T
Sbjct: 262 LISNGDDCISIGPGTSNVEIAGVTCGPSHGISIGSLGVHNSQAC-----------VSNLT 310
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
V + + +S G+RIKT G G V + + N+ ENV I++ Y + + T+
Sbjct: 311 VRDTVIRESDNGLRIKTWQGGMGSVSNLKFENIQMENVGNCILID-QYYCLTKECLNQTS 369
Query: 181 LPEIRDISFTTVHG-HGVR-VPVRIHGSEAIPVRNVTFRDMSV 221
+ D+S+ + G + VR P+ S+ + N+T ++ +
Sbjct: 370 AVHVNDVSYKNIKGTYDVRTAPIHFACSDTVACTNITLSEVEL 412
>Medtr8g009810.1 | pectin lyase superfamily protein | HC |
chr8:2423952-2426973 | 20130731
Length = 400
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 120/258 (46%), Gaps = 31/258 (12%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S++IV++ +T +S + + C N+ ++ V + A +PNTDGI + I +
Sbjct: 162 SNNIVMNGVTSLNSQMFHIVIDRCNNVKVQGVKVTA-AGNSPNTDGIHVQLSSSVTILNS 220
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSA---GVSIGSEMSG----G 115
I GDD I+I SG NL + S+ G+SIGS G
Sbjct: 221 NIETGDDCISIGSG----------------TTNLWIESIACGPGHGISIGSLAKEFQELG 264
Query: 116 VSNVTVENLFVWDSRRGVRIKTAAGR--GGYVRQITYRNLTFENVRVGIVMKTDYNEHPD 173
V NVTV+ + + GVRIK + GR G+ R I +++ T NV+ IV+ +Y +
Sbjct: 265 VENVTVKTIKFIGTENGVRIK-SWGRPSNGFARNIIFQHATMVNVQNPIVIDQNYCPNQK 323
Query: 174 DGYDPTALPEIRDISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHI-F 231
D + +I +I + +HG +V ++++ S P ++ D V LTY+ K+
Sbjct: 324 DCPGQASGVKISNIIYQDIHGTSATKVALKLNCSPTNPCTGISLED--VMLTYENKNAEA 381
Query: 232 QCAFVEGQVIGTIFPSPC 249
C G G + P+ C
Sbjct: 382 LCNHAGGVTYGVVQPNNC 399
>Medtr8g077320.1 | pectin lyase superfamily protein | LC |
chr8:32921813-32926670 | 20130731
Length = 364
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+D+ + N+ + +SP C I N+ + +P +PNTDG D S +++LIED
Sbjct: 137 NDLSVRNVRITNSPGAHGTINGCNRAKISNLDVQSPS-HSPNTDGFDISSSKNILIEDST 195
Query: 64 ISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNV 119
I GDD IAI G I+ +RP+ + V G+SIGS G V V
Sbjct: 196 IRTGDDCIAINGGSSY--ISVSRPTRFDSSTRVRVACGPGHGISIGSLGKGNSYETVEEV 253
Query: 120 TVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDY 168
V N ++ G RIKT G GY ++IT+ + NV+ I++ Y
Sbjct: 254 NVPNCSFTNTTNGARIKTFPGGSGYAKKITFEQIQLTNVKNTIIIDQHY 302
>Medtr2g032710.2 | polygalacturonase plant-like protein | HC |
chr2:12319301-12315408 | 20130731
Length = 463
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 17/223 (7%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
SS++V+ + +++SP + + C+ + I ++I AP +PNTDGI + D+ I +
Sbjct: 205 SSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPKL-SPNTDGIHLGNTRDVGIYNS 263
Query: 63 YISVGDDAIAIKSGWDQYGI--AYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
IS GDD I+I G + P+ I I +L V + + VSN+T
Sbjct: 264 LISNGDDCISIGPGCSNVNVDGVTCAPTHGISIGSLGVHNSHAC-----------VSNLT 312
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
V N + +S G+RIKT G G V +T+ N+ ENVR I + Y + + T+
Sbjct: 313 VRNSIIKESDNGLRIKTWQGGTGSVTGLTFDNIQMENVRNCINIDQFYCLS-KECMNQTS 371
Query: 181 LPEIRDISFTTVHG-HGVRV-PVRIHGSEAIPVRNVTFRDMSV 221
+ +IS+ + G + VR P+ S+ + N+T ++ +
Sbjct: 372 AVYVNNISYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIEL 414
>Medtr2g032710.1 | polygalacturonase plant-like protein | HC |
chr2:12322300-12315408 | 20130731
Length = 463
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 17/223 (7%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
SS++V+ + +++SP + + C+ + I ++I AP +PNTDGI + D+ I +
Sbjct: 205 SSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPKL-SPNTDGIHLGNTRDVGIYNS 263
Query: 63 YISVGDDAIAIKSGWDQYGI--AYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVT 120
IS GDD I+I G + P+ I I +L V + + VSN+T
Sbjct: 264 LISNGDDCISIGPGCSNVNVDGVTCAPTHGISIGSLGVHNSHAC-----------VSNLT 312
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTA 180
V N + +S G+RIKT G G V +T+ N+ ENVR I + Y + + T+
Sbjct: 313 VRNSIIKESDNGLRIKTWQGGTGSVTGLTFDNIQMENVRNCINIDQFYCLS-KECMNQTS 371
Query: 181 LPEIRDISFTTVHG-HGVRV-PVRIHGSEAIPVRNVTFRDMSV 221
+ +IS+ + G + VR P+ S+ + N+T ++ +
Sbjct: 372 AVYVNNISYRKIKGTYDVRTPPIHFACSDTVACTNITLSEIEL 414
>Medtr2g435640.1 | polygalacturonase | HC | chr2:13796366-13791435 |
20130731
Length = 423
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 25/255 (9%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+D +I NI +D + + + NI ++ + + AP +PNTDG+ ++ I
Sbjct: 186 TDGIIQNIKSKDPKGFHVFVTNSANIRLRLIKLNAPA-TSPNTDGLHISHSINVKISRSS 244
Query: 64 ISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS------EMSGGVS 117
+ GDD +++ G N+ I+ +R G+SIGS E+ VS
Sbjct: 245 VETGDDCVSMIQGVS-----------NVTIKR--IRCGPGHGISIGSLGKYPDEIE--VS 289
Query: 118 NVTVENLFVWDSRRGVRIKTAAGR-GGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGY 176
+ V+ + + G+RIK+ + G I Y ++T ENV+ I++ +Y P+
Sbjct: 290 GIRVQTCKLVGTTNGLRIKSWPDKYPGAATDINYSDITMENVKNPIIIDQEYECSPNCKK 349
Query: 177 DPTALPEIRDISFTTVHGHGVR-VPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAF 235
P+ L +I++ISF + G + V + S+ P +NV ++++ L KK +CA
Sbjct: 350 KPS-LVKIKNISFRNIRGTTTSPIAVDLKCSKLFPCKNVGLHNINLSLGAKKPTASKCAN 408
Query: 236 VEGQVIGTIFPSPCE 250
++ G+ P PC
Sbjct: 409 IKPIYSGSQKPPPCR 423
>Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-14516292 |
20130731
Length = 470
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 127/273 (46%), Gaps = 24/273 (8%)
Query: 1 MWSSDIV-ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLI 59
+SS+ V I +I +++SP L + K I + N+TI +P +PNTDGI + +D+ I
Sbjct: 192 FYSSNFVKIRDIKIKNSPLCHLKFDNSKGIKVDNITISSPE-NSPNTDGIHLQNTQDVEI 250
Query: 60 EDCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGG 115
+ I GDD ++I++G NI + + ++ G+S+G +
Sbjct: 251 QHSNIGTGDDCVSIQTG-----------CSNIHVHH--IKCGPGHGISLGGLGKDKSVAC 297
Query: 116 VSNVTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDG 175
VS++ VE++ + ++ G RIKT G G V+ +++ + +V +++ Y +
Sbjct: 298 VSDIIVEDISMKNTLYGARIKTWQGGNGMVKNVSFSRIKVYDVMYPVMIDQYYCDK-QIC 356
Query: 176 YDPTALPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSV--GLTYKKKHIFQC 233
+ T I + F + G PV + S +IP +V D+ + L+Y+ C
Sbjct: 357 KNQTGTVIISGVKFDQISGSYTLQPVHLACSNSIPCTDVDLTDIQLRPSLSYRGMQQAMC 416
Query: 234 AFVEGQVIGTIFPSPCENLDRYNEQGQLVKHSA 266
G+ G + PS + R G L+K A
Sbjct: 417 WNSYGKSQGQLVPSSIDYCLR--SGGGLIKRIA 447
>Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38095209-38097944 | 20130731
Length = 396
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
Query: 6 IVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYIS 65
+ +SN+ +SP + CKN +I N+ I AP +PNTDGID ++ I + I
Sbjct: 158 LTLSNLNHMNSPKNHISVDSCKNASIFNIHITAPP-TSPNTDGIDISQSTNIAIMNSTIE 216
Query: 66 VGDDAIAIKSGWDQYGIA--YARPSMNIMIRNLVVRSMVSAGVSIGSEMS-GGVSNVTVE 122
GDD IAI +G I + P I + S+G + S V +V V+
Sbjct: 217 TGDDCIAINNGSSVITITGTFCGPGHGISVG------------SLGKDNSYATVEDVRVQ 264
Query: 123 NLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALP 182
N + G RIKT G GY R ITY ++ V+ +++ YN + D
Sbjct: 265 NCTFTGTSNGGRIKTFEGGSGYARNITYEDIILNEVKNPVIIDQAYNPNADSAV------ 318
Query: 183 EIRDISFTTVHGHGV 197
EI D++++ + G V
Sbjct: 319 EISDVTYSNIRGTSV 333
>Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:44629212-44625414 | 20130731
Length = 404
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 25 DCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAY 84
CK I N+ ++AP E+PNTDGID + D+ + + +I+ GDD IAI +G
Sbjct: 185 SCKKGIISNIRLIAP-GESPNTDGIDISASRDIQVLNSFIATGDDCIAISAG-------- 235
Query: 85 ARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVENLFVWDSRRGVRIKTAAG 140
+ +I+ + G+SIGS + G V +V V+N + ++ GVRIKT G
Sbjct: 236 -----SSVIKITAITCGPGHGISIGSLGARGDTDIVEDVHVKNCTLTETLTGVRIKTKQG 290
Query: 141 RGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPEIRDISFTTVHGHGVR-V 199
GG+ R+IT+ N+ F I + Y + + T ++ D+++ + G +
Sbjct: 291 GGGFARRITFENIKFVRAHNPIWIDQFYCVNQMVCRNMTKAIKVSDVTYRGISGTSLTDK 350
Query: 200 PVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQ 232
+ ++ + + N+ F + V K +F
Sbjct: 351 AINLNCDQNVGCSNLVFDRVYVRSAVPKMKVFS 383
>Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:21549576-21552288 | 20130731
Length = 401
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 21/247 (8%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
+ D+ ++++T R+SP + CK I N+ I+A +PNTDGID ++ I
Sbjct: 158 LGCQDLKLNDLTHRNSPRNHISIDTCKGAFISNLHIIAAP-TSPNTDGIDISQSSNVFIT 216
Query: 61 DCYISVGDDAIAIKSGWDQYGIA--YARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSN 118
+ +I GDD IAI SG I + P I + +L S V
Sbjct: 217 NSFIGTGDDCIAINSGSRFINITGVFCGPGHGISVGSLGKNGAFST-----------VEQ 265
Query: 119 VTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDP 178
V V N + G RIKT G GY R I Y ++T V + + +Y D
Sbjct: 266 VYVRNCTFTRTSNGARIKTFTGGSGYARNIKYEDITLVEVENPVYINQNYIPVQDSAV-- 323
Query: 179 TALPEIRDISFTTVHGHGV-RVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVE 237
E+ D++F+ +HG + V + I ++ ++++ + + C+
Sbjct: 324 ----EVSDVTFSNIHGTSTGKYAVELLCEPNIGCTDIVLNNINIKPISGGEALVSCSNAH 379
Query: 238 GQVIGTI 244
G+ +
Sbjct: 380 GRCTSCV 386
>Medtr8g030930.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:11531499-11533056 | 20130731
Length = 399
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 19/233 (8%)
Query: 24 YDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIA 83
+ C+N+ ++ + I AP ++PNTDGI + + I I GDD IA+ SG I+
Sbjct: 177 FGCENMLLRGLKITAPK-DSPNTDGIKIGMSKGINISSVNIGTGDDCIAMLSGTRNVRIS 235
Query: 84 --YARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVENLFVWDSRRGVRIK---TA 138
+ P I S G G+E + ++ V+N + GVRIK +
Sbjct: 236 DVFCGPGHGI-----------SVGSLGGNEGEEDIDDIVVKNCTFNGTSNGVRIKSWESQ 284
Query: 139 AGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPEIRDISFTTVHGHG-V 197
+ V TY ++ NV+ IV+ DY HP + +I ++++ + G G
Sbjct: 285 LKKTLVVSNFTYEDIVMNNVQNPIVIDQDYCSHPPCIKKGVSSVQISNVAYKNIRGSGNT 344
Query: 198 RVPVRIHGSEAIPVRNVTFRDMSVGLT-YKKKHIFQCAFVEGQVIGTIFPSPC 249
+V S+ P +N+ ++++ + + KK C FV+G GT P C
Sbjct: 345 KVAASFECSQNKPCQNIRMENINLWPSGHSKKLNNVCLFVKGATYGTQNPPSC 397
>Medtr2g029170.1 | endo-polygalacturonase | HC |
chr2:10881421-10882932 | 20130731
Length = 361
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 114/257 (44%), Gaps = 29/257 (11%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S +I+I+ +T +S + + +C+N+ + V I+AP +PNTDGI S D+ I
Sbjct: 123 SDNIIITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPK-NSPNTDGIHVQSSSDITILKP 181
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSA---GVSIGS----EMSGG 115
I GDD I+I PS RNL + + G+SIGS G
Sbjct: 182 RIRTGDDCISIG------------PST----RNLWIEHVECGPGHGISIGSLGWKLNEPG 225
Query: 116 VSNVTVENLFVWDSRRGVRIKT-AAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDD 174
V NVTV++ ++ G RIK+ G+VR + + + T +V+ I++ Y
Sbjct: 226 VKNVTVKSTTFTKTQNGFRIKSWGKPSNGFVRHVHFVHATMIDVQNPILIDQHYCPLYKG 285
Query: 175 GYDPTALPEIRDISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKK-HIFQ 232
+ + I D+ + + G +V VR S P R + D+ L+YK +
Sbjct: 286 CSNEASGIMISDVLYKDIQGTSATKVAVRFECSSKQPCRRIKLEDLK--LSYKNQVPKAL 343
Query: 233 CAFVEGQVIGTIFPSPC 249
C V G G + P C
Sbjct: 344 CNHVAGTASGMVQPQSC 360
>Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 |
20130731
Length = 346
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+D+ +SN+ + +SP + C T +V+I +P +PNTDG D D+ IE+
Sbjct: 154 NDLSVSNLRITNSPSSHVSINMCNRTTFSHVSINSPA-TSPNTDGFDISFSTDIRIENSN 212
Query: 64 ISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNV 119
I GDD IA+ G + I V G+S+GS + VS+V
Sbjct: 213 IKSGDDCIAVNGGSN-------------FINVTGVTCGPGHGISVGSLGKKRTNDQVSDV 259
Query: 120 TVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPT 179
V N +++ G RIKT G GY R ITY + NV+ I++ YN+
Sbjct: 260 HVRNCTFKETQNGARIKTVPGGSGYARHITYDQIILVNVKNSIIIDQYYND--------- 310
Query: 180 ALPEIRDISFTTV 192
+P+ D+S + V
Sbjct: 311 IIPQAGDVSVSDV 323
>Medtr7g092470.1 | exo-polyalpha-D-galacturonosidase-like protein |
HC | chr7:36655367-36649364 | 20130731
Length = 482
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 5 DIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 64
++ + N+TL +W LH +NITI+++ I + PN DGID + + +I C+I
Sbjct: 190 NVKVFNVTLNQPAYWCLHLVRSENITIQDIAIYGDL-NIPNNDGIDIEDSNNTVITRCHI 248
Query: 65 SVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVENL 124
GDDAI KS P N+ + N +RS SA + GS + +N+
Sbjct: 249 DTGDDAICPKSS--------TGPVHNLTVTNSWIRSKSSA-IKFGSASWFEFKHFVFDNI 299
Query: 125 FVWDSRRGVRIKTAAGRGGYVRQITYRNLT-----FENVRVGIVMKTDYNEHPDDGYDPT 179
+ DS RG+ + GG V I + N+ ++ + G P D
Sbjct: 300 TIVDSHRGLAFQIR--DGGNVSDIVFSNIKISTRYYDPLWWGRAEPIYVTTCPRDSTSKE 357
Query: 180 ALPEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQ 239
A I ++ F + + + + GS+ +RN++F +M++ TY++ + F +
Sbjct: 358 A--SISNVHFINITANSEN-GIFLSGSKRGLLRNLSFINMNI--TYRRFTSYAGGFFD-- 410
Query: 240 VIGTIFPSPCENLDRYNEQGQLVKHSASQNVTDID 274
+ C+ L ++ G +++H V +++
Sbjct: 411 -----YRPGCQELVKHKTAGIMMEHIEGLEVRNVE 440
>Medtr8g031180.1 | polygalacturonase | LC | chr8:11659557-11657369 |
20130731
Length = 281
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 23/191 (12%)
Query: 13 LRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIA 72
+SP + DC N+ I +P + +PNTDG D + +++ IED I GDD IA
Sbjct: 71 FTNSPKQHITLSDCNGAKFSNIDIQSPSY-SPNTDGFDISTSKNVSIEDSTIQSGDDCIA 129
Query: 73 IKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVENLFVWD 128
+K G + I + + G+SIGS E V V V N +
Sbjct: 130 VKEG-------------SSYISATRIACGLGHGISIGSLGINESYQTVEEVYVHNCSFTN 176
Query: 129 SRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYN-----EHPDDGYDPTALPE 183
+ G RIKT G GY R IT+ + NV+ IV+ Y +H D + + +
Sbjct: 177 TTNGARIKTFPGGSGYARNITFEQIQLSNVKNPIVINQFYRAKKRAKHYDIKVEKESSVQ 236
Query: 184 IRDISFTTVHG 194
+ ++++ +G
Sbjct: 237 VTNVTYRGFNG 247
>Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 |
20130731
Length = 388
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+D+ + N+ + +SP + C + T ++I +P +PNTDG D ++LI+D
Sbjct: 154 NDLNVRNLRILNSPRSHVSVNMCNHATFSYISISSPA-TSPNTDGFDISHSNNILIQDSN 212
Query: 64 ISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNV 119
I GDD IA+ G + I V G+S+GS G VS+V
Sbjct: 213 IKSGDDCIAVNGG-------------STFINATRVTCGPGHGISVGSLGGNGANDQVSDV 259
Query: 120 TVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPT 179
V N ++ G RIKT G GY R+IT+ ++ NV I++ Y D T
Sbjct: 260 HVRNCTFIGTQNGARIKTVPGGSGYARKITFEHIVLVNVMNPIIIDQAYTLSTLD----T 315
Query: 180 ALPEIRDISF 189
A+ +RD+++
Sbjct: 316 AV-SVRDVTY 324
>Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-39390473 |
20130731
Length = 407
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 25/254 (9%)
Query: 5 DIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 64
+ ++ ++T +S + H + C NI+ N+ I AP +PNTDG+ S + + + + I
Sbjct: 168 NAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAP-GNSPNTDGMHISSSDFITVTNSVI 226
Query: 65 SVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVT 120
+ GDD I++ + NI I + G+S+GS V+ V+
Sbjct: 227 ATGDDCISV-----------GHSTSNITISGITCGP--GHGISVGSLGKRPEEKTVNGVS 273
Query: 121 VENLFVWDSRRGVRIKTAAGRG-GYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPT 179
V+N S G RIKT G + I Y +L ++V+ IV+ Y + + T
Sbjct: 274 VKNCTFIGSTNGARIKTWIGTAPAEAKNIVYEDLIMKDVQNPIVIDQSYGKK--ERVPST 331
Query: 180 ALPEIRDISFTTVHGHGV-RVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHI-FQCAFVE 237
++ +I D F + G V +PV + S P N+ D+ + +K I F + +
Sbjct: 332 SVWKISDAHFRRIKGTTVSNIPVSLQCSSKNPCENIEVADVELTYVGPQKSIPFANSCIN 391
Query: 238 GQVI--GTIFPSPC 249
+ I G + P+ C
Sbjct: 392 AKAIFGGKLNPAAC 405
>Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 402
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 38/255 (14%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S + +S IT+++S L C N+ + ++T +P ++PNTDGI + +D++I
Sbjct: 171 SDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSP-GDSPNTDGIHLQNSQDVVISGS 229
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG-VSNVTV 121
+S G +GI+ S+G E + VSNVTV
Sbjct: 230 TLSCG------------HGISIG---------------------SLGKENTKACVSNVTV 256
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTAL 181
++ + ++ GVRIKT G G V+ I + N+ +V+ I++ Y + + T+
Sbjct: 257 RDVTLQNTLTGVRIKTWQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDG-GKCRNVTSA 315
Query: 182 PEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVI 241
+ I +T VHG + P+ S+++P + +T + + + F C G++
Sbjct: 316 VAVSSIHYTNVHGTYTKEPIYFACSDSLPCKGITLDTIKLESSQNSNVPF-CWKAYGELK 374
Query: 242 GTIFPSPCENLDRYN 256
I P P + L R N
Sbjct: 375 TEIVP-PVDCLQRGN 388
>Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38089185-38091032 | 20130731
Length = 391
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 94/239 (39%), Gaps = 18/239 (7%)
Query: 15 DSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIK 74
DSP + DC I ++ I+AP +PNTDGID +++IE IS GDD IAI
Sbjct: 165 DSPKNHISIVDCNGALISHLHIIAPE-NSPNTDGIDISRSTNIIIEHSTISTGDDCIAIN 223
Query: 75 SGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVENLFVWDSR 130
SG + I + G+S+GS G V V V + +
Sbjct: 224 SG-------------SKFINITAINCGPGHGISVGSLGKDGKYATVEEVHVSHSIFTGTE 270
Query: 131 RGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPEIRDISFT 190
G RIKT GY R+ITY ++T V I++ Y+ ++ D++F
Sbjct: 271 NGARIKTWTAGTGYARKITYEDITLIKVNNPIIIDQHYDALESVSDSVRKGVKVSDVTFR 330
Query: 191 TVHGHGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVIGTIFPSPC 249
G I N+ ++++ +K C V+G PC
Sbjct: 331 GFRGTANEKDAIELNCARIGCTNIVLENINIAGLGGEKPSASCNNVQGSCSSCNPNVPC 389
>Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:2553377-2556933 | 20130731
Length = 389
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
+ N+ + +SP + C + T +++I + +PNTDG D ++LIE+ I G
Sbjct: 159 VRNLRILNSPRSHVAVTMCNHSTFSHISINSAA-TSPNTDGFDISRSSNVLIENSMIRSG 217
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIG----SEMSGGVSNVTVEN 123
DD IA+ SG + I V G+SIG S + VS+V + N
Sbjct: 218 DDCIALNSG-------------SFFINVTRVTCGPGHGISIGNLGRSRSNDQVSDVYIRN 264
Query: 124 LFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDD 174
+ G RIKT G GY RQIT+ + NV I++ Y P D
Sbjct: 265 CTFIGTTNGARIKTVPGGSGYARQITFEQVILSNVMNPIIIDQGYKISPTD 315
>Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 |
20130731
Length = 389
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
+ N+ + +SP + C + T +++I + +PNTDG D ++ IE+ I G
Sbjct: 159 VRNLRILNSPKSHVSVNMCNHSTFSHISINSAA-ASPNTDGFDISRSNNISIENSKIRSG 217
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVEN 123
DD IA+ G + I V G+SIGS ++ VS+V + N
Sbjct: 218 DDCIAVNGG-------------SFFINITRVTCGPGHGISIGSLGRNRLNDKVSDVHIRN 264
Query: 124 LFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDD 174
+ G RIKT G GY RQIT+ + NV+ I++ Y P D
Sbjct: 265 CTFIGTTNGARIKTVPGGSGYARQITFEQIILSNVKNPIIIDQGYKISPTD 315
>Medtr2g058640.1 | polygalacturonase 11c, putative | HC |
chr2:24232613-24230991 | 20130731
Length = 407
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 22/250 (8%)
Query: 1 MWSSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIE 60
M+ ++ +++ +T +DS + + C N T T+ AP ++PNTDGI D+ I
Sbjct: 153 MFVNNSMVTGVTSKDSKNFHVMVLGCNNFTFDGFTVTAPS-DSPNTDGIHMGRSTDVKIL 211
Query: 61 DCYISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGV 116
+ I GDD +++ G S I ++ V+ G+S+GS V
Sbjct: 212 NTNIGTGDDCVSLGDG-----------SRKITVQG--VKCGPGHGISVGSLGRYTTEDNV 258
Query: 117 SNVTVENLFVWDSRRGVRIKTAAGRGG--YVRQITYRNLTFENVRVGIVMKTDYNEHPDD 174
VTV+N + ++ GVRIKT G V I + ++T NV I++ +Y
Sbjct: 259 EGVTVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDITMNNVTNPIIIDQEYCPWNAC 318
Query: 175 GYDPTALPEIRDISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQC 233
+ ++ ISF + G G V + S A+P V ++ V K I +C
Sbjct: 319 NKKVPSKVKLSKISFKNIQGTSGAPEGVVLVCSSAVPCDGVELNNVDVKFN-GKPAIAKC 377
Query: 234 AFVEGQVIGT 243
+ V+ V GT
Sbjct: 378 SNVKPTVTGT 387
>Medtr2g083670.1 | pectin lyase superfamily protein | HC |
chr2:35113079-35111056 | 20130731
Length = 236
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S +++ISN+T +SPFWT+H C ++T++NVTILAP F PNTDGID S ++
Sbjct: 169 SKNVLISNVTFLNSPFWTMHHVYCSHVTVQNVTILAP-FGLPNTDGIDSYSLIMYALKTG 227
Query: 63 YISV 66
YISV
Sbjct: 228 YISV 231
>Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 |
20130731
Length = 390
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
+SN+++ +SP + C T N++I +P +PNTDG D ++I D I G
Sbjct: 160 VSNLSITNSPRSHVAVNMCNGATFSNISINSP-GTSPNTDGFDIALSTHIVIHDSNIKSG 218
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVEN 123
DD IAI G + + G+S+GS G VSN+ V N
Sbjct: 219 DDCIAINGGSS-------------FVNATRITCGPGHGISVGSLGKKGSEDKVSNIHVRN 265
Query: 124 LFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDY 168
+++ G RIKT G GY + IT+ + NV I++ +Y
Sbjct: 266 CTFNETQNGARIKTIPGGLGYAKHITFEQIILVNVNNPIIIDQEY 310
>Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 |
20130731
Length = 388
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 4 SDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCY 63
+D+ + + + +SP + C NV I +P +PNTDG D + ++++IED
Sbjct: 156 NDLSVRKLKITNSPGGHIAINGCYGAKFSNVVIDSPA-HSPNTDGFDISASKNIVIEDST 214
Query: 64 ISVGDDAIAIKSGWDQYGIA--YARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTV 121
I GDD IA+ G + + P I I +L G E+ V V V
Sbjct: 215 IQAGDDCIALNGGSSYINVTRVFCGPGHGISIGSL--------GKHNSHEI---VEEVYV 263
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEH 171
N D+ G RIKT G GY R+I + + +NV I++ Y
Sbjct: 264 RNCSFIDTTNGARIKTFPGGSGYARKIIFEQIQLKNVYNPIIIDQHYGSQ 313
>Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-13559381 |
20130731
Length = 334
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 3 SSDIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDC 62
S+D+ + N+ + ++P + C T + + +P +PNTDG D +++ + D
Sbjct: 165 SNDLTVRNLRITNTPGAHIAINGCIGATFSQILVNSP-GNSPNTDGFDISYSKNITVVDS 223
Query: 63 YISVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSN 118
I+ GDD IA+ G + I V G+SIGS G V
Sbjct: 224 TIATGDDCIAVNGG-------------SSYIYATRVACGPGHGISIGSLGKGNSFEVVEE 270
Query: 119 VTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDY 168
V V N S G RIKT G GY R+IT+ + ++V+ I++ +Y
Sbjct: 271 VHVRNCNFTGSTNGARIKTFPGGSGYARKITFEQIQLKDVKNAIIIDQNY 320
>Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-14738756 |
20130731
Length = 416
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Query: 7 VISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISV 66
++ IT+++SP L +C + + +V+I +P ++PNTDGI + +D+LI ++
Sbjct: 282 TVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPG-DSPNTDGIHLQNSKDVLIHSSKLAC 340
Query: 67 GDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVE 122
GDD I+I++G N+ + N V G+SIGS VSN+TV
Sbjct: 341 GDDCISIQTG-----------CSNVYVHN--VNCGPGHGISIGSLGKDNTRACVSNITVR 387
Query: 123 NLFVWDSRRGVRIKT 137
++ + DS GVRIKT
Sbjct: 388 DVNIHDSMNGVRIKT 402
>Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-32731175 |
20130731
Length = 394
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 26 CKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYA 85
C + I N+ I+AP ++PNTDGID + ++ ++ IS GDD IAI +G +
Sbjct: 174 CNDALISNLHIIAPK-DSPNTDGIDISTSTNISVQHSIISTGDDCIAINNGTE------- 225
Query: 86 RPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVENLFVWDSRRGVRIKTAAGR 141
I ++ G+S+GS G V + V N+ ++ G RIKT G
Sbjct: 226 ------FIYITDIQCGPGHGISVGSLGKDGDYSTVEEIHVSNITFRETTNGARIKTWTGG 279
Query: 142 GGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDP-----------TALPEIRDISFT 190
GY R+ITY ++ V +++ Y D +P + ++ D+ F
Sbjct: 280 SGYARKITYEDIIVFKVENPVIIDQQY-----DALEPLKTKYNVLEGVSKAVKVSDVIFR 334
Query: 191 TVHGHGVRVPVRIHGSEAIPVR-------NVTFRDMSVGLTYKKKHIFQCAFVEGQV 240
+ G +G +AI + N+ D+ + KK C V+G
Sbjct: 335 NIRG-------TTNGKDAIDLNCARIGCTNIILEDIDIVDLDGKKASASCNSVQGSC 384
>Medtr7g091840.1 | endo polygalacturonase | HC |
chr7:36349369-36347147 | 20130731
Length = 384
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 5 DIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 64
D+++ N+ +R++ + D N+T + + +P ++PNTDGI + +++ I
Sbjct: 199 DLIVENLKIRNAQQIHISFQDSVNVTASGLIVASPE-DSPNTDGIHVTNTQNIKISSSIA 257
Query: 65 SVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVT 120
+ GDD I+I G S N+ N+ G+SIGS +G VS V
Sbjct: 258 AAGDDCISIVDG-----------SRNVEATNITCGP--GHGISIGSLGAGKSKDIVSGVM 304
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDY 168
V + + GVRIKT G G IT++N+ +NV I++ +Y
Sbjct: 305 VNGAKISGTTNGVRIKTWPGGSGIASNITFQNIEMDNVTNPIIIDQNY 352
>Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family
protein | LC | scaffold0157:20596-15247 | 20130731
Length = 365
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 29 ITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYARPS 88
+ I + I AP E+PNTDGID +LI+D I+ GDD IA+ +G +
Sbjct: 146 VNIFKINITAPQ-ESPNTDGIDIGHSSYVLIQDSTIATGDDCIAMNNG-----------T 193
Query: 89 MNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVENLFVWDSRRGVRIKTAAGRGGY 144
NI I + G+S+GS G V V V+N + G+RIKT G GY
Sbjct: 194 SNINITGVTCGP--GHGISVGSLGENGAYEIVEQVYVKNCTFIRTENGMRIKTWPGGSGY 251
Query: 145 VRQITYRNLTFENVRVGIVMKTDYNE 170
R I++ + + I++ +Y +
Sbjct: 252 ARNISFEQIILTETKNPIIIDQNYRD 277
>Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr4:12499881-12505230 | 20130731
Length = 365
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 29 ITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAYARPS 88
+ I + I AP E+PNTDGID +LI+D I+ GDD IA+ +G +
Sbjct: 146 VNIFKINITAPQ-ESPNTDGIDIGHSSYVLIQDSTIATGDDCIAMNNG-----------T 193
Query: 89 MNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVENLFVWDSRRGVRIKTAAGRGGY 144
NI I + G+S+GS G V V V+N + G+RIKT G GY
Sbjct: 194 SNINITGVTCGP--GHGISVGSLGENGAYEIVEQVYVKNCTFIRTENGMRIKTWPGGSGY 251
Query: 145 VRQITYRNLTFENVRVGIVMKTDYNE 170
R I++ + + I++ +Y +
Sbjct: 252 ARNISFEQIILTETKNPIIIDQNYRD 277
>Medtr7g091850.1 | endo polygalacturonase | HC |
chr7:36360735-36353948 | 20130731
Length = 450
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 108/248 (43%), Gaps = 20/248 (8%)
Query: 5 DIVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 64
D+++ ++T++++ + D N+ + + +P +PNTDGI + +++ I I
Sbjct: 208 DLIVEDLTIQNAQQIHVSFQDSTNVKASGLKVSSP-GNSPNTDGIHITNTQNIKISSSII 266
Query: 65 SVGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVT 120
GDD I+I G S N+ ++ G+SIGS +G VS V
Sbjct: 267 GTGDDCISIVDG-----------SSNVEATDITCGP--GHGISIGSLGAGKSKDFVSGVL 313
Query: 121 VENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPT- 179
V + + GVRIKT G G I ++N+ +NV I++ +Y +
Sbjct: 314 VNGAKISGTTNGVRIKTWPGGSGSASNIKFQNIEMDNVTNPIIINQNYCDKKKKPCKKMD 373
Query: 180 ALPEIRDISFTTVHGHGVR-VPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEG 238
+ +I ++ + + G V V+ SE P + + +++ + + C V+
Sbjct: 374 SAVQISNVLYQNITGKSASDVAVKFDCSEKFPCKEIKMQNILLICEEGEPAKALCNNVQL 433
Query: 239 QVIGTIFP 246
IG + P
Sbjct: 434 SYIGNVNP 441
>Medtr2g058840.1 | polygalacturonase 11c, putative | HC |
chr2:24297949-24299598 | 20130731
Length = 417
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 7 VISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISV 66
++ +T +DS + + + C NIT + TI AP ++PNTDGI + I + I
Sbjct: 157 LVHGVTSKDSKNFHVMVFGCNNITFDSFTITAP-GDSPNTDGIHMGKSTGVKILNTNIGT 215
Query: 67 GDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVE 122
GDD ++I G Q + V+ G+SIGS V +T++
Sbjct: 216 GDDCVSIGDGSKQITVEG-------------VKCGPGHGLSIGSLGKFTTEENVEGITIK 262
Query: 123 NLFVWDSRRGVRIKTAAGRGG--YVRQITYRNLTFENVRVGIVMKTDYNE-HPDDGYDPT 179
N + + GVRIKT G V I + ++T NV+ +++ +Y + +P+
Sbjct: 263 NCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKKNPS 322
Query: 180 ALPEIRDISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSV 221
+ ++ I+F V G G V + S A+P V ++ +
Sbjct: 323 KI-KLSKITFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDL 364
>Medtr2g058670.1 | polygalacturonase 11c, putative | HC |
chr2:24244330-24242502 | 20130731
Length = 419
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 23/223 (10%)
Query: 7 VISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISV 66
++ +T +DS + + + C NIT + TI AP ++PNTDGI + I + I
Sbjct: 159 LVHGVTSKDSKNFHVMVFGCNNITFDSFTITAP-GDSPNTDGIHMGKSTGVKILNTNIGT 217
Query: 67 GDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVE 122
GDD ++I G Q + V+ G+SIGS V +T++
Sbjct: 218 GDDCVSIGDGSKQITVEG-------------VKCGPGHGLSIGSLGKFTTEENVEGITIK 264
Query: 123 NLFVWDSRRGVRIKTAAGRGG--YVRQITYRNLTFENVRVGIVMKTDYNE-HPDDGYDPT 179
N + + GVRIKT G V I + ++T NV+ +++ +Y + +P+
Sbjct: 265 NCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKKNPS 324
Query: 180 ALPEIRDISFTTVHG-HGVRVPVRIHGSEAIPVRNVTFRDMSV 221
+ ++ I+F V G G V + S A+P V ++ +
Sbjct: 325 KI-KLSKITFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDL 366
>Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:3280656-3277876 | 20130731
Length = 382
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 23/244 (9%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
I+ +T + P + D ++ITI ++ I +P ++ NTDGID + I D I G
Sbjct: 150 INGLTHINGPGAHIAVIDSQDITISHIHINSPK-KSHNTDGIDLTRTIGVNIHDIQIESG 208
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVEN 123
DD IA+K G S + + N+ G+S+GS G V + +V+N
Sbjct: 209 DDCIAVKGG-----------SQFVNVSNVTCGP--GHGISVGSLGGHGSEEFVQHFSVKN 255
Query: 124 LFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPE 183
+ V+IKT G GY + I + ++ + + Y P+ +
Sbjct: 256 CTFNGADSAVKIKTWPGGKGYAKHIIFEDIIINQTNYPVFIDQHYMRTPEQ----HQAVK 311
Query: 184 IRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSV-GLTYKKKHIFQCAFVEGQVIG 242
I +I+F+ ++G + + I N+T +++ + KK +C V G
Sbjct: 312 ISNITFSNIYGTCIGEDAVVLDCAKIGCYNITLNQINITSINRKKPASVKCKNVHGTAND 371
Query: 243 TIFP 246
I P
Sbjct: 372 IIAP 375
>Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 |
20130731
Length = 390
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 23/244 (9%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
I+ +T + P + D ++ITI ++ I +P E+ NTDGID + + D I G
Sbjct: 158 ITGLTHINGPGPHIAVTDSQDITISHIHINSPK-ESHNTDGIDLTRAIRVNVHDIPIRSG 216
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVEN 123
DD IAIK G ++ V G+S+GS G V ++ ++N
Sbjct: 217 DDCIAIKGGSQFVNVSQ-------------VTCGPGHGISVGSLGGHGSPEFVEHLRIKN 263
Query: 124 LFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPE 183
V+IKT G GY + I + ++ + + Y + P+ +
Sbjct: 264 CTFNGGDSAVKIKTWPGGKGYAKDIIFEDIILYQTNYPVYIDQHYMKTPEQ----HQAVK 319
Query: 184 IRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSV-GLTYKKKHIFQCAFVEGQVIG 242
I +I F+ +HG + + I ++T + + + KK +C V G
Sbjct: 320 ISNIKFSNIHGTCIDENAIVLDCAKIGCYDITLNQIKITSINRKKPASVKCKNVHGTATN 379
Query: 243 TIFP 246
I P
Sbjct: 380 IISP 383
>Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-46959130 |
20130731
Length = 376
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 111/274 (40%), Gaps = 37/274 (13%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
+ N+T+ +S + C + + + + AP +PNTDGI + + + I + G
Sbjct: 136 VRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPS-SSPNTDGIHISATKGIEISHSDVKTG 194
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVENLFVW 127
DD I+I R S + IRN G+SIG+ ++
Sbjct: 195 DDCISI-----------VRNSSQVWIRNFSCGP--GHGISIGTYLT-------------- 227
Query: 128 DSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPEIRDI 187
+++ G+RIKT G G IT++++ ENV I++ Y + + T+ ++ +I
Sbjct: 228 NTKNGLRIKTWQGGHGLASNITFQDIVMENVSNPIIIDQYYCDSRLPCKNQTSAVQVVNI 287
Query: 188 SFTTVHGHGV-RVPVRIHGSEAIPVRNVTFRDMSVGLTYKKKHIFQCAFVEGQVI--GTI 244
SF + G ++ S+ P + ++ + + + C G G +
Sbjct: 288 SFINIIGTSASEETIKFACSDTYPCEGLHLENIYLPSYFGENRRSYCWQAHGSTSSQGCV 347
Query: 245 FPSPCENLDRYNEQGQLVKHSASQNVT-DIDYDF 277
P C ++ L++ + DI+YD
Sbjct: 348 NPPAC-----FSTSSDLIRQNVLLETNPDINYDL 376
>Medtr8g010050.1 | pectin lyase superfamily protein | LC |
chr8:2530574-2534406 | 20130731
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 30/201 (14%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
+SN+++ +SP + C T N++I +P +PNTDG D ++I D I G
Sbjct: 160 VSNLSITNSPRSHVAVNMCNGATFSNISINSP-GTSPNTDGFDIALSTHIVIHDSNIKSG 218
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGG----VSNVTVEN 123
DD IA+ G + + + + G+S+GS G VS++ V N
Sbjct: 219 DDCIAVNGG-------------STFVNAIRITCGPGHGISVGSLGKNGTEDKVSDIHVRN 265
Query: 124 LFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYD------ 177
+++ G RIKT G V + +R T + G+ ++ N YD
Sbjct: 266 CTFNETQNGARIKTIPGANVSVSSVKFRGFTGTSAS-GLAIQ--LNCSSSGCYDILLEQN 322
Query: 178 --PTALPEIRDISFTTVHGHG 196
+A PE SF T + HG
Sbjct: 323 NIVSAQPEKAASSFCT-NAHG 342
>Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-49886301 |
20130731
Length = 422
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 25 DCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIAY 84
C NI ++ + + AP +PNTDGI + + I C I GDD + + G +Q I
Sbjct: 207 QCSNIRLQRLRLTAPD-TSPNTDGIHISTSYGVKINRCTIGTGDDCVGMIDGSEQIAINK 265
Query: 85 AR--PSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVENLFVWDSRRGVRIKTAAGR- 141
+ P I I +L R+ E V V V+N + + G+RIK+ R
Sbjct: 266 LKCGPGHGISIGSLGRRA---------DERE--VKGVRVQNSELIGTDNGLRIKSFPERF 314
Query: 142 GGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPEIRDISFTTVHG 194
G +I + N+ NV+ I++ +Y E D +L +I +I F+ + G
Sbjct: 315 AGGASEIFFTNINMTNVKNPIIIDQEY-ECDDICKKKPSLVKIANIHFSNIRG 366
>Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 |
20130731
Length = 397
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 22/246 (8%)
Query: 6 IVISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYIS 65
+ +S +T + P ++ +++TI ++ I + ++ NTDGID + + I D I
Sbjct: 162 LQLSGLTHINGPAMHVYVVHSQDVTISHINISSSK-DSYNTDGIDISNSIRVNIHDSIIQ 220
Query: 66 VGDDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSN----VTV 121
GDD IAIK G Q+ +N+ V + G+S+GS GG V V
Sbjct: 221 SGDDCIAIKGG-SQF--------INVT---QVTCGPGTHGISVGSLGGGGAEEFADRVNV 268
Query: 122 ENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTAL 181
N + RIKT G GY + I + ++ +R I ++ Y G +
Sbjct: 269 RNCTFNGADSAARIKTWPGGKGYAKAIIFDHIIVNQIRNPISIQQHYMR----GGEQKDA 324
Query: 182 PEIRDISFTTVHGHGVRVPVRIHGSEAIPVRNVTFRDMSV-GLTYKKKHIFQCAFVEGQV 240
++ D++F+ ++G I N+T +++ + KK + C V+G+
Sbjct: 325 VKVSDVTFSNIYGTCSGDDAIFLDCANIGCDNITLEQINITSVDPKKPNSAICNNVQGKA 384
Query: 241 IGTIFP 246
I P
Sbjct: 385 NNIISP 390
>Medtr2g042760.1 | polygalacturonase-like protein, putative | HC |
chr2:18647076-18647387 | 20130731
Length = 59
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 11/60 (18%)
Query: 112 MSGGVSNVTVENLFVWDSRRGVRIKTAAGRGGYVRQITYRNLTFENVR-VGIVMKTDYNE 170
MSGGVSN+T+EN+ VW SRR +RIKTA G R+++F N+R G+ + T E
Sbjct: 1 MSGGVSNITIENILVWKSRRAIRIKTAPG----------RDISFTNIRGKGVTLNTKAFE 50
>Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:13011474-13013852 | 20130731
Length = 395
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 24 YDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVGDDAIAIKSGWDQYGIA 83
+ C+N+ + I AP ++PNTDGI + I+ I GDD IA+ SG
Sbjct: 174 FACENMIFTKIRISAP-GDSPNTDGIKIGKSNGITIKSASIGTGDDCIAMVSG------- 225
Query: 84 YARPSMNIMIRNLVVRSMVSAGVSIGS----EMSGGVSNVTVENLFVWDSRRGVRIKTAA 139
+ N+ I ++ GVSIGS + V N+ V+N D+ G+RIKT A
Sbjct: 226 ----TRNVWISDVFCGP--GHGVSIGSLGKNDGEEDVDNINVKNCTFSDTTNGLRIKTWA 279
Query: 140 GRGGYVRQ---ITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPEIRDISFTTVHGH- 195
+ + I Y ++ NV I++ +Y + + +I +S+ + G
Sbjct: 280 SPLTKILKASHIVYEDIVMNNVGNPILIDQEYCPNRGCSNKVPSNVQINTVSYKNIRGSV 339
Query: 196 GVRVPVRIHGSEAIPVRNVTFRDMSV 221
+ + SE P +N+ ++ +
Sbjct: 340 NSEHAMNLKCSEKEPCQNIIVENIDL 365
>Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 333
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 18/134 (13%)
Query: 8 ISNITLRDSPFWTLHPYDCKNITIKNVTILAPVFEAPNTDGIDPDSCEDMLIEDCYISVG 67
+ N+T+ +S + C + + +LAP +PNTDGI + + + I D I G
Sbjct: 196 VRNLTVLNSQKMHIAFTSCMRVVASRLKVLAPA-SSPNTDGIHISATKGVEIRDSLIRTG 254
Query: 68 DDAIAIKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGV----SNVTVEN 123
DD I+I R S + IRN+ G+SIGS V NV V+
Sbjct: 255 DDCISI-----------VRNSSRVWIRNISCGP--GHGISIGSLGKSNVWEKIQNVIVDG 301
Query: 124 LFVWDSRRGVRIKT 137
+++++ GVRIKT
Sbjct: 302 AYLYNTDNGVRIKT 315
>Medtr5g090140.1 | pectin lyase superfamily protein | HC |
chr5:39262290-39261738 | 20130731
Length = 156
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 42/183 (22%)
Query: 73 IKSGWDQYGIAYARPSMNIMIRNLVVRSMVSAGVSIGSEMSGGVSNVTVENLFVWDSRRG 132
+KSGWD+YGI+Y R S +I IR+ V S G++ SE SG V NV + G
Sbjct: 1 MKSGWDKYGISYGRLSSSITIRH-VSGSSPFIGIAGVSETSGRVDNV---------NDMG 50
Query: 133 VRIKTAAGRGGYVRQITYRNLTFENVRVGIVMKTDYNEHPDDGYDPTALPEIRDISFTTV 192
+ K + + GI + D +HPDD D ALP ++
Sbjct: 51 IEYKCV--------------YIYGECKEGIQISGDVGDHPDDKCDLNALPIVK------- 89
Query: 193 HGHGVRVPVRIHGSEAIPVRNVTFRDMS---VGLTYKKKHIFQCAFVEGQVIGTIFPSPC 249
I G + P ++ D++ V T + +C+ V G + + P PC
Sbjct: 90 -------AGLIQGMKNSPFTDICLSDINLHEVNGTRSRTPSCKCSDVFGVAL-QVSPWPC 141
Query: 250 ENL 252
L
Sbjct: 142 PEL 144