Miyakogusa Predicted Gene

Lj0g3v0242709.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0242709.1 gene.g18958.t1.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g101950.1 | peptidase M16 inactive domain protein | HC | c...   135   6e-33

>Medtr8g101950.1 | peptidase M16 inactive domain protein | HC |
           chr8:42848743-42859442 | 20130731
          Length = 978

 Score =  135 bits (341), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 71/114 (62%), Positives = 75/114 (65%), Gaps = 39/114 (34%)

Query: 1   MQVLRFKHGQ---------------------------------------VDLALDEMLRL 21
           MQVLRFKHGQ                                       VD+ALDEMLRL
Sbjct: 766 MQVLRFKHGQIYSVGVSVFLGGNKPSRTGIVRGDISINFSCDPEISSKLVDIALDEMLRL 825

Query: 22  QEEGPSEQDVSTVLEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEV 75
           Q+EGP+EQDVSTVLEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFE+
Sbjct: 826 QDEGPTEQDVSTVLEIEQRAHENGLQENYYWLDRILHSYQSRVYSGDVGTSFEI 879