Miyakogusa Predicted Gene

Lj0g3v0242249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0242249.1 Non Characterized Hit- tr|C5L3W2|C5L3W2_PERM5
ATP-binding cassette transporter, putative
OS=Perkinsu,31.17,0.000007,seg,NULL; ATP-BINDING CASSETTE
TRANSPORTER-RELATED,NULL; ATP-BINDING CASSETTE
TRANSPORTER,NULL,CUFF.15829.1
         (116 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g094660.1 | white-brown-complex ABC transporter family pro...   193   3e-50
Medtr4g058000.1 | ABC transporter G family-like protein | HC | c...   177   1e-45
Medtr7g101780.1 | white-brown-complex ABC transporter family pro...   171   2e-43
Medtr1g063920.1 | white-brown-complex ABC transporter family pro...   167   2e-42

>Medtr1g094660.1 | white-brown-complex ABC transporter family protein,
            putative | HC | chr1:42549405-42557509 | 20130731
          Length = 1103

 Score =  193 bits (491), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 90/116 (77%), Positives = 96/116 (82%)

Query: 1    MSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYAL 60
            MSSLAYFLSKDT+DHFNTVIKPVVYLSMFYF TNPRSTF DNYIVLLCLVYCVTGIAYAL
Sbjct: 937  MSSLAYFLSKDTMDHFNTVIKPVVYLSMFYFLTNPRSTFTDNYIVLLCLVYCVTGIAYAL 996

Query: 61   AILFQPGTAQLWSXXXXXXXXXXATQTNGSKFFKDIANLCYSKWALEAFIIANAER 116
            +I+F+PG AQLWS          ATQ   SK  K IANLCYSKWAL+A +IANAER
Sbjct: 997  SIVFEPGAAQLWSVLLPVVSTLIATQQKDSKILKAIANLCYSKWALQALVIANAER 1052


>Medtr4g058000.1 | ABC transporter G family-like protein | HC |
            chr4:21488258-21495500 | 20130731
          Length = 1104

 Score =  177 bits (450), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/118 (68%), Positives = 95/118 (80%), Gaps = 2/118 (1%)

Query: 1    MSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYAL 60
            MSSLAYFLSKDT+DHF+T+IKP+VYLSMFYFF NPRS+F DNYIVLLCLVYCVTGIAY L
Sbjct: 933  MSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSFTDNYIVLLCLVYCVTGIAYVL 992

Query: 61   AILFQPGTAQLWSXXXXXXXXXXATQTN--GSKFFKDIANLCYSKWALEAFIIANAER 116
            AI  QPG AQLWS          AT  N   SK+ K +++LCY+KW+LEAF+I+NA+R
Sbjct: 993  AIFLQPGPAQLWSVLLPVVLTLLATYDNEEDSKYVKFLSDLCYTKWSLEAFVISNAKR 1050


>Medtr7g101780.1 | white-brown-complex ABC transporter family protein,
            putative | HC | chr7:41045852-41038627 | 20130731
          Length = 1138

 Score =  171 bits (432), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/116 (68%), Positives = 89/116 (76%)

Query: 1    MSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYAL 60
            +SSLA+FL+KDTID F+T+IKPVVYLSMFYF +NPRSTF  NYIVL+CLVYCVTG+AYAL
Sbjct: 938  ISSLAHFLAKDTIDLFSTIIKPVVYLSMFYFLSNPRSTFGSNYIVLVCLVYCVTGMAYAL 997

Query: 61   AILFQPGTAQLWSXXXXXXXXXXATQTNGSKFFKDIANLCYSKWALEAFIIANAER 116
            AI FQP  AQLWS          A Q   + F K +  LCY KWALEAFIIANAER
Sbjct: 998  AIFFQPSPAQLWSVLLPVVMTLIAKQNRDTIFMKILVQLCYPKWALEAFIIANAER 1053


>Medtr1g063920.1 | white-brown-complex ABC transporter family protein,
            putative | HC | chr1:28082889-28092018 | 20130731
          Length = 1081

 Score =  167 bits (423), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 74/116 (63%), Positives = 90/116 (77%)

Query: 1    MSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYAL 60
            +SSLA+FL+KDTID F+T++KP++YLSMFYFF+NPRS+F  NY VL+CLVYCVTG+AYAL
Sbjct: 915  ISSLAHFLAKDTIDLFSTIVKPLIYLSMFYFFSNPRSSFESNYAVLVCLVYCVTGMAYAL 974

Query: 61   AILFQPGTAQLWSXXXXXXXXXXATQTNGSKFFKDIANLCYSKWALEAFIIANAER 116
            AI F+P  AQLWS          A QT  + F K +  +CY KWALEAFIIANAER
Sbjct: 975  AIYFEPAPAQLWSVLLPVVMTLIANQTRDTTFMKILIKMCYPKWALEAFIIANAER 1030