Miyakogusa Predicted Gene
- Lj0g3v0241899.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0241899.1 tr|Q6BE26|Q6BE26_CITUN Somatic embryogenesis
receptor kinase 1 OS=Citrus unshiu GN=SERK PE=2
SV=1,85.71,1e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.15809.1
(75 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g097160.1 | somatic embryogenesis receptor-like kinase | H... 87 4e-18
Medtr2g008360.1 | somatic embryogenesis receptor-like kinase | H... 64 3e-11
Medtr2g008390.1 | somatic embryogenesis receptor kinase | HC | c... 57 5e-09
Medtr2g008400.1 | somatic embryogenesis receptor kinase | HC | c... 55 1e-08
Medtr6g038980.1 | receptor-like protein, putative | LC | chr6:14... 53 6e-08
Medtr2g008370.1 | somatic embryogenesis receptor kinase | HC | c... 52 1e-07
Medtr3g027330.1 | receptor-like protein | LC | chr3:8525327-8522... 52 1e-07
Medtr6g038760.1 | LRR receptor-like kinase | LC | chr6:13913455-... 51 3e-07
Medtr6g037750.1 | receptor-like protein | LC | chr6:13470318-134... 51 3e-07
Medtr6g039180.1 | receptor-like protein | LC | chr6:14113204-141... 50 4e-07
Medtr6g038790.1 | leucine-rich receptor-like kinase family prote... 50 4e-07
Medtr6g038790.2 | leucine-rich receptor-like kinase family prote... 50 4e-07
Medtr6g034450.1 | LRR receptor-like kinase | HC | chr6:11927604-... 50 7e-07
Medtr6g039110.1 | receptor-like protein | LC | chr6:14087285-140... 49 1e-06
Medtr6g034410.1 | receptor-like protein | LC | chr6:11853514-118... 49 1e-06
Medtr5g095420.1 | LRR receptor-like kinase | LC | chr5:41711526-... 48 2e-06
Medtr6g038700.1 | receptor-like protein | LC | chr6:13872493-138... 48 2e-06
Medtr6g034470.1 | receptor-like protein | LC | chr6:11962037-119... 48 2e-06
Medtr2g008380.1 | somatic embryogenesis receptor-like kinase | H... 47 4e-06
Medtr5g080000.1 | LRR receptor-like kinase | LC | chr5:34238597-... 46 8e-06
Medtr5g079980.1 | receptor-like protein | LC | chr5:34230491-342... 46 9e-06
>Medtr1g097160.1 | somatic embryogenesis receptor-like kinase | HC |
chr1:43830613-43825472 | 20130731
Length = 627
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/50 (82%), Positives = 48/50 (96%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGPVTGN 50
M+LTNI LQVLDLSNN+LSG+VP+NGSF+LFTPISFANNL+LCGPVTG+
Sbjct: 161 MSLTNISALQVLDLSNNQLSGVVPDNGSFSLFTPISFANNLNLCGPVTGH 210
>Medtr2g008360.1 | somatic embryogenesis receptor-like kinase | HC |
chr2:1424285-1431027 | 20130731
Length = 619
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 36/46 (78%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
M+LTN+ +LQVLDLSNN L G VP NGSF+LFTPIS+ NN L P
Sbjct: 163 MSLTNVSSLQVLDLSNNDLEGTVPVNGSFSLFTPISYQNNRRLIQP 208
>Medtr2g008390.1 | somatic embryogenesis receptor kinase | HC |
chr2:1444370-1449983 | 20130731
Length = 620
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
++LTN+ TLQVLD+SNN L G P NGSF+LFTPIS+ NN + P
Sbjct: 164 ISLTNVTTLQVLDVSNNNLEGDFPVNGSFSLFTPISYHNNPRIKQP 209
>Medtr2g008400.1 | somatic embryogenesis receptor kinase | HC |
chr2:1450683-1456854 | 20130731
Length = 642
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANN 40
++LTN+ TLQVLD+SNN L G P NGSF++FTPIS+ NN
Sbjct: 161 ISLTNVTTLQVLDVSNNNLEGDFPVNGSFSIFTPISYHNN 200
>Medtr6g038980.1 | receptor-like protein, putative | LC |
chr6:14049539-14046522 | 20130731
Length = 803
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
+L+ ID L VLDLS+N+LSG +P + F P S+ +NLDLCGP
Sbjct: 678 SLSQIDRLSVLDLSHNQLSGKIPTSTQLQSFNPSSYEDNLDLCGP 722
>Medtr2g008370.1 | somatic embryogenesis receptor kinase | HC |
chr2:1431840-1436588 | 20130731
Length = 580
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
++L+N+ TLQVLDLSNN L G +P NGSF LFT S+ NN L P
Sbjct: 161 ISLSNVATLQVLDLSNNNLEGDIPVNGSFLLFTSSSYQNNPRLKQP 206
>Medtr3g027330.1 | receptor-like protein | LC | chr3:8525327-8522316
| 20130731
Length = 1003
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG 45
+ LTN+++L+VLDLSNNRL G +P F FT S+ NLDLCG
Sbjct: 862 LELTNLNSLEVLDLSNNRLVGEIPQGKQFNTFTNDSYEGNLDLCG 906
>Medtr6g038760.1 | LRR receptor-like kinase | LC |
chr6:13913455-13910980 | 20130731
Length = 410
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
+L++ID L VLDLS+N+LSG +P + F S+ +NLDLCGP
Sbjct: 285 SLSHIDRLSVLDLSHNQLSGEIPTSTQLQSFNATSYEDNLDLCGP 329
>Medtr6g037750.1 | receptor-like protein | LC | chr6:13470318-13474508
| 20130731
Length = 1205
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
+L+ ID L VLDLS+N+LSG +P + F P S+ +NLDLCGP
Sbjct: 1080 SLSQIDRLGVLDLSHNQLSGEIPLSTQLQSFNPSSYEDNLDLCGP 1124
>Medtr6g039180.1 | receptor-like protein | LC | chr6:14113204-14108786
| 20130731
Length = 1186
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG 45
+L++ID L VLDLS+N+LSG +P + F P S+ +NLDLCG
Sbjct: 1061 SLSHIDRLSVLDLSHNQLSGEIPTSTQLQSFNPSSYEDNLDLCG 1104
>Medtr6g038790.1 | leucine-rich receptor-like kinase family protein,
putative | LC | chr6:13933349-13931345 | 20130731
Length = 616
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
+L+ ID L VLDLS+N+LSG +P + F S+ +NLDLCGP
Sbjct: 497 SLSQIDWLSVLDLSHNQLSGEIPTSTQLQSFNATSYEDNLDLCGP 541
>Medtr6g038790.2 | leucine-rich receptor-like kinase family protein,
putative | LC | chr6:13933668-13930746 | 20130731
Length = 626
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
+L+ ID L VLDLS+N+LSG +P + F S+ +NLDLCGP
Sbjct: 507 SLSQIDWLSVLDLSHNQLSGEIPTSTQLQSFNATSYEDNLDLCGP 551
>Medtr6g034450.1 | LRR receptor-like kinase | HC |
chr6:11927604-11931606 | 20130731
Length = 828
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 28/44 (63%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG 45
TL+ ID L+VLDLSNN LSG +P P SF NLDLCG
Sbjct: 673 TLSRIDRLEVLDLSNNSLSGRIPFGRQLQTLDPSSFEGNLDLCG 716
>Medtr6g039110.1 | receptor-like protein | LC | chr6:14087285-14083465
| 20130731
Length = 1088
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
+L+ ID L VLDLS+N+LSG +P + F + +NLDLCGP
Sbjct: 963 SLSQIDRLSVLDLSHNQLSGEIPKSTQLQSFDASRYKDNLDLCGP 1007
>Medtr6g034410.1 | receptor-like protein | LC | chr6:11853514-11850413
| 20130731
Length = 1011
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 28/44 (63%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG 45
TL+NID L++LDLSNN LSG +P P F NLDLCG
Sbjct: 964 TLSNIDRLEILDLSNNSLSGRIPFGRQLQTLDPSGFEGNLDLCG 1007
>Medtr5g095420.1 | LRR receptor-like kinase | LC |
chr5:41711526-41714279 | 20130731
Length = 823
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG-PVTGN 50
+ LTN+D L+VLDLSNN L G +P F FT S+ NL LCG P++ N
Sbjct: 734 VKLTNLDFLEVLDLSNNHLVGEIPQGKQFNTFTNDSYEGNLGLCGFPLSKN 784
>Medtr6g038700.1 | receptor-like protein | LC | chr6:13872493-13876565
| 20130731
Length = 1236
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCGP 46
+L+ ID L VLDLS+N+LSG +P + F ++ +NLDLCGP
Sbjct: 1111 SLSQIDRLGVLDLSHNQLSGEIPKSTQLQSFNASNYEDNLDLCGP 1155
>Medtr6g034470.1 | receptor-like protein | LC | chr6:11962037-11966729
| 20130731
Length = 1143
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 27/44 (61%)
Query: 2 TLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG 45
TL+ ID L++LDLSNN LSG +P P F NLDLCG
Sbjct: 984 TLSKIDRLEILDLSNNSLSGRIPFGRQLQTLDPSGFEGNLDLCG 1027
>Medtr2g008380.1 | somatic embryogenesis receptor-like kinase | HC |
chr2:1437567-1442519 | 20130731
Length = 611
Score = 47.0 bits (110), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 1 MTLTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISF 37
++L + TLQVLDLS+N L G VP +GSF LFTP S+
Sbjct: 156 ISLAKVTTLQVLDLSSNNLEGDVPKSGSFLLFTPASY 192
>Medtr5g080000.1 | LRR receptor-like kinase | LC |
chr5:34238597-34241380 | 20130731
Length = 927
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 3 LTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG 45
LTN+++L+VLDLSNN L G +P F FT S+ NL LCG
Sbjct: 809 LTNLNSLEVLDLSNNHLVGEIPQGKQFNTFTNDSYKGNLGLCG 851
>Medtr5g079980.1 | receptor-like protein | LC |
chr5:34230491-34233795 | 20130731
Length = 1021
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 3 LTNIDTLQVLDLSNNRLSGLVPNNGSFALFTPISFANNLDLCG 45
LTN+++L+VLDLSNN L G +P F FT S+ NL LCG
Sbjct: 903 LTNLNSLEVLDLSNNHLVGEIPQGKQFNTFTNDSYKGNLGLCG 945