Miyakogusa Predicted Gene

Lj0g3v0241359.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241359.1 Non Characterized Hit- tr|I3SEM2|I3SEM2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,91.67,0.00000000009,seg,NULL,CUFF.15766.1
         (53 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g087660.2 | DnaJ-class molecular chaperone | HC | chr2:368...    66   6e-12
Medtr2g087660.1 | DnaJ-class molecular chaperone | HC | chr2:368...    65   1e-11
Medtr4g050420.1 | DnaJ-class molecular chaperone | HC | chr4:178...    65   1e-11
Medtr8g006430.1 | DnaJ-class molecular chaperone | HC | chr8:521...    55   1e-08

>Medtr2g087660.2 | DnaJ-class molecular chaperone | HC |
           chr2:36877846-36880558 | 20130731
          Length = 327

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 15  DIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 50
           DIVFVLQ KEHPKFKRK EDLFVEHTLSLTEA+  F
Sbjct: 252 DIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGF 287


>Medtr2g087660.1 | DnaJ-class molecular chaperone | HC |
           chr2:36877846-36880571 | 20130731
          Length = 417

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 32/36 (88%)

Query: 15  DIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 50
           DIVFVLQ KEHPKFKRK EDLFVEHTLSLTEA+  F
Sbjct: 252 DIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGF 287


>Medtr4g050420.1 | DnaJ-class molecular chaperone | HC |
           chr4:17858521-17854579 | 20130731
          Length = 416

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 15  DIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 50
           DIVFVLQ KEHPKFKRK+EDLFVEHTLSLTEA+  F
Sbjct: 250 DIVFVLQQKEHPKFKRKSEDLFVEHTLSLTEALCGF 285


>Medtr8g006430.1 | DnaJ-class molecular chaperone | HC |
           chr8:521449-515917 | 20130731
          Length = 423

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/36 (66%), Positives = 30/36 (83%)

Query: 15  DIVFVLQLKEHPKFKRKAEDLFVEHTLSLTEAVLYF 50
           DIVFVLQ+K HPKF+R+ +DL +EH LSLTEA+  F
Sbjct: 254 DIVFVLQVKGHPKFRRERDDLHIEHNLSLTEALCGF 289