Miyakogusa Predicted Gene

Lj0g3v0241149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0241149.1 Non Characterized Hit- tr|G7IID1|G7IID1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,55.96,3e-19,seg,NULL,
NODE_62377_length_577_cov_19.405546.path1.1
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g038500.1 | hypothetical protein | HC | chr2:16780277-1678...    79   8e-16
Medtr1g093170.1 | hypothetical protein | LC | chr1:33795171-3379...    56   6e-09

>Medtr2g038500.1 | hypothetical protein | HC |
           chr2:16780277-16780855 | 20130731
          Length = 112

 Score = 79.3 bits (194), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 61/109 (55%), Gaps = 9/109 (8%)

Query: 1   MGIENYEEFXXXXXXXXXXXXXXAKTSFKHVTETELFNAEKTEEHKNEVDEECCTPTSPT 60
           MG+E  EEF                 + KHV+E      E T++   E ++EC TPTS  
Sbjct: 1   MGLEMLEEFLPITPIRTIAPMTK---TLKHVSE-----VETTKKVLRENEQECHTPTSSR 52

Query: 61  QTLRIEQLVCPPAPKKPRLTRRNKNSAAPPCQGFFQVTHDLASVFVIRK 109
                  LVCPPAPKK R+T+RNKNSA  P Q FFQV HDLASVFV RK
Sbjct: 53  GQSSHNFLVCPPAPKKSRVTQRNKNSAL-PSQVFFQVPHDLASVFVFRK 100


>Medtr1g093170.1 | hypothetical protein | LC |
           chr1:33795171-33794505 | 20130731
          Length = 186

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 54/109 (49%), Gaps = 23/109 (21%)

Query: 1   MGIENYEEFXXXXXXXXXXXXXXAKTSFKHVTETELFNAEKTEEHKNEVDEECCTPTSPT 60
           MG+E  EEF                 + KHV+E      E TE+   E ++EC TPTS  
Sbjct: 1   MGLEMLEEFRPITPIRTIALMTK---TLKHVSE-----VETTEKVLKEDEQECQTPTSSR 52

Query: 61  QTLRIEQLVCPPAPKKPRLTRRNKNSAAPPCQGFFQVTHDLASVFVIRK 109
                 Q+V         +TR NKNSA PP Q FFQV HDLASVFV RK
Sbjct: 53  G-----QIV---------VTRINKNSA-PPSQVFFQVPHDLASVFVFRK 86