Miyakogusa Predicted Gene

Lj0g3v0239839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0239839.1 Non Characterized Hit- tr|C5XY07|C5XY07_SORBI
Putative uncharacterized protein Sb04g007400 OS=Sorghu,42.76,3e-19,ABC
TRANSPORTER,NULL; ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A
(ABCA),ABC transporter A,
ABCA,NODE_40083_length_417_cov_39.980816.path3.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g437870.1 | ABC transporter A family protein | HC | chr3:1...   269   7e-73
Medtr4g108240.1 | ABC transporter A family protein | HC | chr4:4...   248   2e-66
Medtr4g108240.3 | ABC transporter A family protein | HC | chr4:4...   246   5e-66
Medtr4g108240.2 | ABC transporter A family protein | HC | chr4:4...   246   6e-66
Medtr4g108153.1 | ABC transporter A family protein | HC | chr4:4...   243   6e-65
Medtr4g108163.1 | ABC transporter A family protein | HC | chr4:4...   238   2e-63
Medtr4g108170.1 | ABC transporter A family protein | HC | chr4:4...   228   2e-60
Medtr4g108210.1 | ABC transporter A family protein | HC | chr4:4...   209   6e-55

>Medtr3g437870.1 | ABC transporter A family protein | HC |
           chr3:12930672-12922696 | 20130731
          Length = 939

 Score =  269 bits (688), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 127/152 (83%), Positives = 139/152 (91%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYW+ISY YFLAIS IY+LCFVIFG+VIGLKFFTMNDYSIQFVFYF++IN
Sbjct: 372 MMKMHGLGDGPYWIISYSYFLAISIIYMLCFVIFGTVIGLKFFTMNDYSIQFVFYFIYIN 431

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQISLAFLLA LFSNVKTA V AYIGVFGTG L   L QFF+Q+ SF +GWIIVMELYPG
Sbjct: 432 LQISLAFLLASLFSNVKTATVIAYIGVFGTGLLAGFLFQFFIQDTSFPKGWIIVMELYPG 491

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEFSQSSFTGD +GTHGMRWGDL+D
Sbjct: 492 FALYRGLYEFSQSSFTGDTMGTHGMRWGDLND 523


>Medtr4g108240.1 | ABC transporter A family protein | HC |
           chr4:44893783-44902165 | 20130731
          Length = 934

 Score =  248 bits (632), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 117/152 (76%), Positives = 133/152 (87%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYW+I+YGYFLA+S IY+LCFVIFGSV+GLKFFT+NDYSIQFVFYF++IN
Sbjct: 367 MMKMHGLGDGPYWMITYGYFLALSVIYMLCFVIFGSVLGLKFFTLNDYSIQFVFYFIYIN 426

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQIS+A LLA  FSNVKTA V AYIGVFGTG L   LLQFF+Q+ SF RGWII MELYPG
Sbjct: 427 LQISVAILLASFFSNVKTATVTAYIGVFGTGLLAGFLLQFFIQDSSFPRGWIICMELYPG 486

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEF QS+ +G  +GT GMRW DLSD
Sbjct: 487 FALYRGLYEFGQSATSGSNMGTVGMRWQDLSD 518


>Medtr4g108240.3 | ABC transporter A family protein | HC |
           chr4:44893783-44900100 | 20130731
          Length = 742

 Score =  246 bits (629), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 117/152 (76%), Positives = 133/152 (87%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYW+I+YGYFLA+S IY+LCFVIFGSV+GLKFFT+NDYSIQFVFYF++IN
Sbjct: 367 MMKMHGLGDGPYWMITYGYFLALSVIYMLCFVIFGSVLGLKFFTLNDYSIQFVFYFIYIN 426

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQIS+A LLA  FSNVKTA V AYIGVFGTG L   LLQFF+Q+ SF RGWII MELYPG
Sbjct: 427 LQISVAILLASFFSNVKTATVTAYIGVFGTGLLAGFLLQFFIQDSSFPRGWIICMELYPG 486

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEF QS+ +G  +GT GMRW DLSD
Sbjct: 487 FALYRGLYEFGQSATSGSNMGTVGMRWQDLSD 518


>Medtr4g108240.2 | ABC transporter A family protein | HC |
           chr4:44893783-44902139 | 20130731
          Length = 825

 Score =  246 bits (628), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 117/152 (76%), Positives = 133/152 (87%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYW+I+YGYFLA+S IY+LCFVIFGSV+GLKFFT+NDYSIQFVFYF++IN
Sbjct: 367 MMKMHGLGDGPYWMITYGYFLALSVIYMLCFVIFGSVLGLKFFTLNDYSIQFVFYFIYIN 426

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQIS+A LLA  FSNVKTA V AYIGVFGTG L   LLQFF+Q+ SF RGWII MELYPG
Sbjct: 427 LQISVAILLASFFSNVKTATVTAYIGVFGTGLLAGFLLQFFIQDSSFPRGWIICMELYPG 486

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEF QS+ +G  +GT GMRW DLSD
Sbjct: 487 FALYRGLYEFGQSATSGSNMGTVGMRWQDLSD 518


>Medtr4g108153.1 | ABC transporter A family protein | HC |
           chr4:44832885-44841828 | 20130731
          Length = 892

 Score =  243 bits (619), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 117/152 (76%), Positives = 132/152 (86%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYW+I+YGYFLA+SAIY+LCFVIFGSV+GLKFFT+NDYSIQFVFYF++IN
Sbjct: 325 MMKMHGLGDGPYWMITYGYFLALSAIYMLCFVIFGSVLGLKFFTLNDYSIQFVFYFIYIN 384

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQIS AFLL+  F+NV+TA V AYIGVFGTG LG  L QFFVQE SF RGWII MELYPG
Sbjct: 385 LQISTAFLLSSFFANVRTATVTAYIGVFGTGLLGGFLFQFFVQETSFPRGWIICMELYPG 444

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEF+Q S +   L T GMRW DLSD
Sbjct: 445 FALYRGLYEFAQFSSSLSNLRTDGMRWKDLSD 476


>Medtr4g108163.1 | ABC transporter A family protein | HC |
           chr4:44844962-44852895 | 20130731
          Length = 922

 Score =  238 bits (607), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 110/152 (72%), Positives = 130/152 (85%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYW+ISYGYFLA+S IY+LCFV FGSV GLKFFT+NDYSIQF+FYF++IN
Sbjct: 355 MMKMHGLGDGPYWMISYGYFLALSVIYILCFVTFGSVFGLKFFTLNDYSIQFIFYFIYIN 414

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQIS+AFLL+  +SNVKTA V +YIGVFGTG LG+   Q F+Q  SF+R WII MELYPG
Sbjct: 415 LQISMAFLLSSFYSNVKTATVSSYIGVFGTGLLGSQFFQHFIQVSSFAREWIICMELYPG 474

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEF++S+  G   GT+GMRW DLSD
Sbjct: 475 FALYRGLYEFAESATNGSNSGTNGMRWQDLSD 506


>Medtr4g108170.1 | ABC transporter A family protein | HC |
           chr4:44858044-44867506 | 20130731
          Length = 919

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 113/153 (73%), Positives = 127/153 (83%), Gaps = 1/153 (0%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYWLISYGYFLA+S IY+LCFVIFGSV+GLKFFT+NDYSIQFVFYF+++N
Sbjct: 352 MMKMHGLGDGPYWLISYGYFLALSVIYILCFVIFGSVLGLKFFTLNDYSIQFVFYFIYVN 411

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQIS AFLL+  FSNVKTA V AY+ VFGTG L   L Q FV+  SF RGWII MELYPG
Sbjct: 412 LQISTAFLLSSFFSNVKTATVTAYLVVFGTGLLACFLFQNFVEATSFPRGWIICMELYPG 471

Query: 121 FSLFRGLYEFSQSSFT-GDALGTHGMRWGDLSD 152
           FSL+RGLYEF+QS+ T     GT GM W DL+D
Sbjct: 472 FSLYRGLYEFAQSAATISSNSGTGGMLWQDLND 504


>Medtr4g108210.1 | ABC transporter A family protein | HC |
           chr4:44879386-44885074 | 20130731
          Length = 535

 Score =  209 bits (533), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 104/152 (68%), Positives = 127/152 (83%), Gaps = 6/152 (3%)

Query: 1   MMKMHGLGDGPYWLISYGYFLAISAIYVLCFVIFGSVIGLKFFTMNDYSIQFVFYFLFIN 60
           MMKMHGLGDGPYWLI+YGYFLA+SAIY+LCFV+FGS +GLKFF+ NDY+IQF+FYF+++N
Sbjct: 32  MMKMHGLGDGPYWLITYGYFLALSAIYMLCFVMFGSSLGLKFFSSNDYTIQFLFYFIYLN 91

Query: 61  LQISLAFLLACLFSNVKTAAVFAYIGVFGTGSLGASLLQFFVQEKSFSRGWIIVMELYPG 120
           LQIS+AFLL+   S+VKTAAV AY+GVF TG LG+ L + F+ E S SRGWII MELYPG
Sbjct: 92  LQISMAFLLSSFLSDVKTAAVIAYLGVFATGLLGSYLFEKFL-ESSVSRGWIICMELYPG 150

Query: 121 FSLFRGLYEFSQSSFTGDALGTHGMRWGDLSD 152
           F+L+RGLYEF QSS  G +     M+W +LSD
Sbjct: 151 FALYRGLYEFGQSSSFGGS-----MQWQNLSD 177