Miyakogusa Predicted Gene

Lj0g3v0239829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0239829.1 Non Characterized Hit- tr|C5XY05|C5XY05_SORBI
Putative uncharacterized protein Sb04g007380 OS=Sorghu,41.44,3e-19,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; ABC
TRANSPORTER,NULL,NODE_52073_length_418_cov_65.677032.path3.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g437870.1 | ABC transporter A family protein | HC | chr3:1...   236   6e-63
Medtr4g108170.1 | ABC transporter A family protein | HC | chr4:4...   221   2e-58
Medtr4g108153.1 | ABC transporter A family protein | HC | chr4:4...   219   6e-58
Medtr4g108163.1 | ABC transporter A family protein | HC | chr4:4...   218   1e-57
Medtr4g108240.1 | ABC transporter A family protein | HC | chr4:4...   216   7e-57
Medtr4g108240.2 | ABC transporter A family protein | HC | chr4:4...   215   1e-56
Medtr4g108240.3 | ABC transporter A family protein | HC | chr4:4...   215   1e-56
Medtr4g108210.1 | ABC transporter A family protein | HC | chr4:4...   103   8e-23
Medtr7g091380.2 | ABC transporter family protein | HC | chr7:361...    57   4e-09
Medtr7g091380.3 | ABC transporter family protein | HC | chr7:361...    57   4e-09
Medtr7g091380.4 | ABC transporter family protein | HC | chr7:360...    57   5e-09
Medtr7g091380.1 | ABC transporter family protein | HC | chr7:361...    57   5e-09

>Medtr3g437870.1 | ABC transporter A family protein | HC |
           chr3:12930672-12922696 | 20130731
          Length = 939

 Score =  236 bits (602), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 112/148 (75%), Positives = 125/148 (84%)

Query: 1   MRWGDLSDSTNGMKEVFIIIFMEWILALMFAYYMDQVLTSGCGKSHLFFMKEFQKNRSSS 60
           MRWGDL+DSTNGMKEV II+F+EW+L L FAYY+DQVL++   KS L F+K FQK  SSS
Sbjct: 516 MRWGDLNDSTNGMKEVLIIMFVEWLLVLFFAYYIDQVLSTRSWKSPLLFLKGFQKKHSSS 575

Query: 61  FQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPARDGNPAK 120
           F+K S QRQ SKV V  EK D++QEREKVEQL+LEPTTNHAIVCD L KVYP RDGNP K
Sbjct: 576 FRKPSLQRQGSKVFVMTEKADIHQEREKVEQLLLEPTTNHAIVCDKLSKVYPGRDGNPKK 635

Query: 121 FAVRGLSLALPQGECFGMLGPNGAGKTS 148
           FAVR LSLALP+GECFGMLGPNGAGKTS
Sbjct: 636 FAVRELSLALPEGECFGMLGPNGAGKTS 663


>Medtr4g108170.1 | ABC transporter A family protein | HC |
           chr4:44858044-44867506 | 20130731
          Length = 919

 Score =  221 bits (564), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/148 (71%), Positives = 123/148 (83%), Gaps = 1/148 (0%)

Query: 1   MRWGDLSDSTNGMKEVFIIIFMEWILALMFAYYMDQVLTSGCGKSHLFFMKEFQKNRSSS 60
           M W DL+DSTNGMKEV II+ +EWI+ L  AYY+DQVL++G GKS LFF+K FQK +  S
Sbjct: 497 MLWQDLNDSTNGMKEVLIIMLVEWIVVLFIAYYIDQVLSTGSGKSPLFFLKRFQK-KPPS 555

Query: 61  FQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPARDGNPAK 120
           F+KLS QRQ SKVLV +EK DV QEREKVEQL+LEPT NHAIVC++L+K YP RDGNP K
Sbjct: 556 FEKLSIQRQGSKVLVQLEKEDVIQEREKVEQLLLEPTINHAIVCNDLKKFYPGRDGNPGK 615

Query: 121 FAVRGLSLALPQGECFGMLGPNGAGKTS 148
           FAV  L LA+P+GECFGMLGPNGAGKTS
Sbjct: 616 FAVGELFLAVPRGECFGMLGPNGAGKTS 643


>Medtr4g108153.1 | ABC transporter A family protein | HC |
           chr4:44832885-44841828 | 20130731
          Length = 892

 Score =  219 bits (558), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 103/148 (69%), Positives = 117/148 (79%)

Query: 1   MRWGDLSDSTNGMKEVFIIIFMEWILALMFAYYMDQVLTSGCGKSHLFFMKEFQKNRSSS 60
           MRW DLSD  NGMKEV II+  EWI+ L+ AYY+DQVL++G GK  LFF+K FQ     S
Sbjct: 469 MRWKDLSDGVNGMKEVLIIMSAEWIVVLLVAYYIDQVLSTGSGKGPLFFLKGFQIKLLPS 528

Query: 61  FQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPARDGNPAK 120
            +K S QRQ SKV   MEKPDV QEREKV+QL+ EPT NHAIVCDN++K YP RDGNP K
Sbjct: 529 LKKPSIQRQGSKVFAQMEKPDVIQEREKVKQLLHEPTINHAIVCDNIKKFYPGRDGNPGK 588

Query: 121 FAVRGLSLALPQGECFGMLGPNGAGKTS 148
           FAVRGL LA+P+GECFGMLGPNGAGKTS
Sbjct: 589 FAVRGLFLAVPRGECFGMLGPNGAGKTS 616


>Medtr4g108163.1 | ABC transporter A family protein | HC |
           chr4:44844962-44852895 | 20130731
          Length = 922

 Score =  218 bits (555), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/148 (69%), Positives = 121/148 (81%)

Query: 1   MRWGDLSDSTNGMKEVFIIIFMEWILALMFAYYMDQVLTSGCGKSHLFFMKEFQKNRSSS 60
           MRW DLSDS NGMKEV II+  EW++ L  +YY+DQVL++G GKS LFF+K FQK   SS
Sbjct: 499 MRWQDLSDSANGMKEVLIIMSSEWVVVLCVSYYIDQVLSTGSGKSPLFFLKGFQKKPLSS 558

Query: 61  FQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPARDGNPAK 120
            +KL+ QRQ S+VL  MEK DV QEREKVEQL+LEPT +HAIVCD+L+K YP RDGNP K
Sbjct: 559 LKKLAIQRQGSEVLAQMEKEDVIQEREKVEQLLLEPTNDHAIVCDDLKKFYPGRDGNPGK 618

Query: 121 FAVRGLSLALPQGECFGMLGPNGAGKTS 148
           FAV+ L LA+P+GECFGMLGPNGAGKTS
Sbjct: 619 FAVKELFLAVPRGECFGMLGPNGAGKTS 646


>Medtr4g108240.1 | ABC transporter A family protein | HC |
           chr4:44893783-44902165 | 20130731
          Length = 934

 Score =  216 bits (550), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 102/148 (68%), Positives = 118/148 (79%)

Query: 1   MRWGDLSDSTNGMKEVFIIIFMEWILALMFAYYMDQVLTSGCGKSHLFFMKEFQKNRSSS 60
           MRW DLSDS NGMKEV II+F EWI+ L  AYY+DQV ++G GKS +FF+K F K   SS
Sbjct: 511 MRWQDLSDSANGMKEVLIIMFAEWIIVLFVAYYIDQVSSTGSGKSTIFFLKGFLKKPLSS 570

Query: 61  FQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPARDGNPAK 120
            +KLS QRQ+S VL  MEKPD+ QE+EKVEQL+LEPT +HAIVCD L+K Y  RDGNP K
Sbjct: 571 CKKLSIQRQESNVLAQMEKPDIVQEKEKVEQLLLEPTIDHAIVCDGLKKFYRGRDGNPGK 630

Query: 121 FAVRGLSLALPQGECFGMLGPNGAGKTS 148
            AVR L LA+P+GECFGMLGPNGAGKTS
Sbjct: 631 LAVRELFLAVPRGECFGMLGPNGAGKTS 658


>Medtr4g108240.2 | ABC transporter A family protein | HC |
           chr4:44893783-44902139 | 20130731
          Length = 825

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 102/148 (68%), Positives = 118/148 (79%)

Query: 1   MRWGDLSDSTNGMKEVFIIIFMEWILALMFAYYMDQVLTSGCGKSHLFFMKEFQKNRSSS 60
           MRW DLSDS NGMKEV II+F EWI+ L  AYY+DQV ++G GKS +FF+K F K   SS
Sbjct: 511 MRWQDLSDSANGMKEVLIIMFAEWIIVLFVAYYIDQVSSTGSGKSTIFFLKGFLKKPLSS 570

Query: 61  FQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPARDGNPAK 120
            +KLS QRQ+S VL  MEKPD+ QE+EKVEQL+LEPT +HAIVCD L+K Y  RDGNP K
Sbjct: 571 CKKLSIQRQESNVLAQMEKPDIVQEKEKVEQLLLEPTIDHAIVCDGLKKFYRGRDGNPGK 630

Query: 121 FAVRGLSLALPQGECFGMLGPNGAGKTS 148
            AVR L LA+P+GECFGMLGPNGAGKTS
Sbjct: 631 LAVRELFLAVPRGECFGMLGPNGAGKTS 658


>Medtr4g108240.3 | ABC transporter A family protein | HC |
           chr4:44893783-44900100 | 20130731
          Length = 742

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 102/148 (68%), Positives = 118/148 (79%)

Query: 1   MRWGDLSDSTNGMKEVFIIIFMEWILALMFAYYMDQVLTSGCGKSHLFFMKEFQKNRSSS 60
           MRW DLSDS NGMKEV II+F EWI+ L  AYY+DQV ++G GKS +FF+K F K   SS
Sbjct: 511 MRWQDLSDSANGMKEVLIIMFAEWIIVLFVAYYIDQVSSTGSGKSTIFFLKGFLKKPLSS 570

Query: 61  FQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPARDGNPAK 120
            +KLS QRQ+S VL  MEKPD+ QE+EKVEQL+LEPT +HAIVCD L+K Y  RDGNP K
Sbjct: 571 CKKLSIQRQESNVLAQMEKPDIVQEKEKVEQLLLEPTIDHAIVCDGLKKFYRGRDGNPGK 630

Query: 121 FAVRGLSLALPQGECFGMLGPNGAGKTS 148
            AVR L LA+P+GECFGMLGPNGAGKTS
Sbjct: 631 LAVRELFLAVPRGECFGMLGPNGAGKTS 658


>Medtr4g108210.1 | ABC transporter A family protein | HC |
           chr4:44879386-44885074 | 20130731
          Length = 535

 Score =  103 bits (256), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/76 (61%), Positives = 57/76 (75%)

Query: 55  KNRSSSFQKLSFQRQDSKVLVDMEKPDVNQEREKVEQLILEPTTNHAIVCDNLRKVYPAR 114
           K +++    LS QRQ SK    MEK DV QEREKV+QL+LEPT NHAIVCD+L+K YP R
Sbjct: 183 KEKTTCITNLSIQRQGSKASAQMEKADVIQEREKVQQLLLEPTINHAIVCDDLKKFYPGR 242

Query: 115 DGNPAKFAVRGLSLAL 130
           DGNP KFAV+ + LA+
Sbjct: 243 DGNPGKFAVKEMFLAV 258


>Medtr7g091380.2 | ABC transporter family protein | HC |
            chr7:36100881-36078800 | 20130731
          Length = 1704

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)

Query: 78   EKPDVNQEREKVEQLILEPTTNHAIV-CDNLRKVYPARDGNPAKFAVRGLSLALPQGECF 136
            E  DV  ER +V    L  + ++AI+   NLRKVY     +  K AV  L+ ++ +GECF
Sbjct: 1255 EDVDVKTERNRV----LSGSIDNAIIYLRNLRKVYSEEKNHGKKVAVDSLTFSVQEGECF 1310

Query: 137  GMLGPNGAGKTS 148
            G LG NGAGKT+
Sbjct: 1311 GFLGTNGAGKTT 1322


>Medtr7g091380.3 | ABC transporter family protein | HC |
            chr7:36103028-36078800 | 20130731
          Length = 1872

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)

Query: 78   EKPDVNQEREKVEQLILEPTTNHAIV-CDNLRKVYPARDGNPAKFAVRGLSLALPQGECF 136
            E  DV  ER +V    L  + ++AI+   NLRKVY     +  K AV  L+ ++ +GECF
Sbjct: 1437 EDVDVKTERNRV----LSGSIDNAIIYLRNLRKVYSEEKNHGKKVAVDSLTFSVQEGECF 1492

Query: 137  GMLGPNGAGKTS 148
            G LG NGAGKT+
Sbjct: 1493 GFLGTNGAGKTT 1504


>Medtr7g091380.4 | ABC transporter family protein | HC |
            chr7:36098504-36078800 | 20130731
          Length = 1684

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)

Query: 78   EKPDVNQEREKVEQLILEPTTNHAIV-CDNLRKVYPARDGNPAKFAVRGLSLALPQGECF 136
            E  DV  ER +V    L  + ++AI+   NLRKVY     +  K AV  L+ ++ +GECF
Sbjct: 1235 EDVDVKTERNRV----LSGSIDNAIIYLRNLRKVYSEEKNHGKKVAVDSLTFSVQEGECF 1290

Query: 137  GMLGPNGAGKTS 148
            G LG NGAGKT+
Sbjct: 1291 GFLGTNGAGKTT 1302


>Medtr7g091380.1 | ABC transporter family protein | HC |
            chr7:36103028-36078789 | 20130731
          Length = 1886

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)

Query: 78   EKPDVNQEREKVEQLILEPTTNHAIV-CDNLRKVYPARDGNPAKFAVRGLSLALPQGECF 136
            E  DV  ER +V    L  + ++AI+   NLRKVY     +  K AV  L+ ++ +GECF
Sbjct: 1437 EDVDVKTERNRV----LSGSIDNAIIYLRNLRKVYSEEKNHGKKVAVDSLTFSVQEGECF 1492

Query: 137  GMLGPNGAGKTS 148
            G LG NGAGKT+
Sbjct: 1493 GFLGTNGAGKTT 1504