Miyakogusa Predicted Gene

Lj0g3v0238989.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238989.2 Non Characterized Hit- tr|K4DHX2|K4DHX2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.25,4e-18,DUF1977,Domain of unknown function DUF1977,
DnaJ-like; seg,NULL,CUFF.15689.2
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g436560.1 | chaperone DnaJ-domain protein | HC | chr2:1422...    79   1e-15

>Medtr2g436560.1 | chaperone DnaJ-domain protein | HC |
           chr2:14228611-14227342 | 20130731
          Length = 363

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 1/87 (1%)

Query: 57  SEPIYTLSQSYPYEHR-VTTPRGVNYYVKSTKFAQDYPEGTRERETVEDKVEREYFGILR 115
           SEP Y+L ++  Y+ R VT   GV ++VKS  F  +YP G+  RET+ED V ++Y  +LR
Sbjct: 273 SEPEYSLHKNQSYQIRKVTEDYGVEFFVKSQAFDVNYPIGSLARETIEDTVIKDYRNMLR 332

Query: 116 QNCQFELQRRQWGYIKETPHCDILRKY 142
           + CQ E+QRR W      PHCD L+ +
Sbjct: 333 RYCQLEIQRRTWNRHLPIPHCDKLKNF 359