Miyakogusa Predicted Gene

Lj0g3v0238379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238379.1 Non Characterized Hit- tr|E1Z6W4|E1Z6W4_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,39.81,0.0000000000004,Tocopherol_cycl,Tocopherol
cyclase,CUFF.15628.1
         (115 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110160.1 | tocopherol cyclase | HC | chr3:51129466-511341...   206   4e-54

>Medtr3g110160.1 | tocopherol cyclase | HC | chr3:51129466-51134136
           | 20130731
          Length = 479

 Score =  206 bits (524), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 98/115 (85%), Positives = 105/115 (91%)

Query: 1   MYSVENPAFPNPLTPLELVQYGPRFTGVGAQILGADDNYICQYTPQSNNFWGSRHELVLG 60
           MYSVENPAF   L+ LEL QYGPRFTGVGAQILGADD YICQYTPQS NFWGSR+EL+LG
Sbjct: 103 MYSVENPAFRKELSTLELAQYGPRFTGVGAQILGADDKYICQYTPQSPNFWGSRNELMLG 162

Query: 61  NTFVAKPNSKPPNKEVPPQEFNNRVLEGFQVTTLWNQGFICDDGRSNYVETVKTA 115
           NTF AK NSKPPNKEVPP+EFN++VLEGFQVT LWNQGFICDDGRS+YVETVKTA
Sbjct: 163 NTFAAKQNSKPPNKEVPPKEFNDKVLEGFQVTPLWNQGFICDDGRSDYVETVKTA 217