Miyakogusa Predicted Gene

Lj0g3v0238219.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238219.1 CUFF.15613.1
         (455 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g060890.1 | hypothetical protein | HC | chr1:26523784-2652...   280   2e-75

>Medtr1g060890.1 | hypothetical protein | HC |
           chr1:26523784-26528833 | 20130731
          Length = 504

 Score =  280 bits (716), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 216/501 (43%), Positives = 260/501 (51%), Gaps = 89/501 (17%)

Query: 1   MMAQNKQHLLHELLKEDQEPFLLKNYISHRRNQLKRPSQKPTHXXXXXXXXXXXXXXXXX 60
           MMA  K   LHELLKEDQEPFLL NYISH+RNQ+KR S   T                  
Sbjct: 1   MMAAQKH--LHELLKEDQEPFLLNNYISHKRNQIKRSSSYTT-----------------L 41

Query: 61  XXXXHKXXXXXXXFLCRNACFLGATT-----KSPLFELVKSPCRSPSNAIFLQIPAKTAS 115
                K        LC+NACF          KSPLFEL  SP +SP     L+IPAKTAS
Sbjct: 42  QLKKQKPPPTRTINLCKNACFFSFQNTPDIRKSPLFEL-SSPVKSP-----LRIPAKTAS 95

Query: 116 RLLDAALRIQKNQSKTKLPSNKN-SFALLGSFFKXXXXXXXXXXXXXXXXXNNVKVSVKD 174
            LL+AAL+IQ     +K P++KN SF + GSFFK                 N   VSVKD
Sbjct: 96  LLLEAALKIQ-----SKKPNSKNKSFGVFGSFFKKLTQRNRSKKSE-----NEENVSVKD 145

Query: 175 LLRWDSSNNRKSSTSVEEKLKKE--NGFVVECSCDGRAS-SAVWXXXXXXXXXXXXXXXX 231
           +LRWDSS  R+   S    +++E   GF V CSC+GR S S VW                
Sbjct: 146 ILRWDSSIGRRHRKSFNSIVEEEENKGFEV-CSCNGRPSCSGVWSESNEDKSLDMETSS- 203

Query: 232 XXXCGGHSCEKENAVXXXXXXXXXXXX-----------QSPFRFVLQKSPSASSGHRTPE 280
                GHSCE    V                       +SPFRF L++S S+SSG RTPE
Sbjct: 204 ----SGHSCESVEEVEFVMSKKKENVDCACFDPHGFFCESPFRFALERSASSSSGRRTPE 259

Query: 281 FSSAAASSSRCGTQDKENNVANGVNEFQS---EEEKEQCSPVSILETPFXXXXXXXXXXX 337
           FSS A S  R   +DKENN  +GVN+FQS   E+EKEQ SPVS+L+  F           
Sbjct: 260 FSSPAESPRRPQIEDKENNGVDGVNKFQSGEDEDEKEQFSPVSVLDPLFEDYDDDDDCHE 319

Query: 338 XXXXXXX-XLECSYANVQRTKQQLLDRLSRFEKLAELDAIELEKRMLDQEDEFVTYSEED 396
                    +ECSYANVQR+KQ LLDRL RFE+LAELD +ELEKRM  QED      ++ 
Sbjct: 320 NDDDEGDFDMECSYANVQRSKQLLLDRLRRFEQLAELDPLELEKRM--QEDNEAFEDDDY 377

Query: 397 DDG----------------ETSCEEKTPED------LKRLVHDLIMEEERELGSSEDRNM 434
           ++                 E  C     E        KRLV+DLI EEE+EL  S+D ++
Sbjct: 378 EEDESEASSEEKALREIVHEILCHPSVHERWQDQKVFKRLVYDLIKEEEKELNFSQDMDI 437

Query: 435 VMRRVCRKLELWREVEPNTID 455
           VM+RVC+K+ELW+EVE NTID
Sbjct: 438 VMKRVCKKMELWKEVESNTID 458