Miyakogusa Predicted Gene

Lj0g3v0238139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0238139.1 tr|G7KCI4|G7KCI4_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_5g039490 PE=4 SV=1,45.65,0.004,
,CUFF.15609.1
         (65 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g039490.1 | F-box/RNI/FBD-like domain protein | LC | chr5:...    46   9e-06

>Medtr5g039490.1 | F-box/RNI/FBD-like domain protein | LC |
           chr5:17391513-17392853 | 20130731
          Length = 378

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 32/46 (69%)

Query: 1   MRNARLLQVMTLHCSRYMEKDQKDWFSKHLSGCQRISPTCKIVLDT 46
           ++NARLLQVMT+H + +    +   F ++LS C R+SPTCK+ L +
Sbjct: 332 LQNARLLQVMTIHHTLHPNPMESPQFLENLSSCPRMSPTCKLNLSS 377