Miyakogusa Predicted Gene
- Lj0g3v0237869.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0237869.1 Non Characterized Hit- tr|I1MRG3|I1MRG3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52246
PE,67.12,6e-18,seg,NULL; LIN-9-RELATED,NULL; LIN-9,NULL,CUFF.15591.1
(73 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g119390.1 | always EARLY-like protein | HC | chr4:49426944... 84 3e-17
Medtr4g119390.2 | always EARLY-like protein | HC | chr4:49426944... 84 3e-17
Medtr1g083040.6 | always EARLY-like protein | HC | chr1:36931175... 55 1e-08
Medtr1g083040.1 | always EARLY-like protein | HC | chr1:36931175... 55 1e-08
Medtr1g083040.5 | always EARLY-like protein | HC | chr1:36931175... 55 1e-08
Medtr1g083040.3 | always EARLY-like protein | HC | chr1:36931175... 55 1e-08
Medtr1g083040.4 | always EARLY-like protein | HC | chr1:36931175... 55 1e-08
Medtr1g083040.2 | always EARLY-like protein | HC | chr1:36931175... 55 1e-08
Medtr1g083040.7 | always EARLY-like protein | HC | chr1:36931175... 55 1e-08
Medtr1g492660.1 | hypothetical protein | HC | chr1:41523492-4152... 46 6e-06
>Medtr4g119390.1 | always EARLY-like protein | HC |
chr4:49426944-49447981 | 20130731
Length = 1163
Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 53/73 (72%)
Query: 1 MAPXXXXXXXXXXXXNIHEAASSRDKDAANVVKTRQKASAGVQKKRKLADMLGPQWSKEE 60
M P NI EAA+S+DKDAAN + RQKA G+QKKRKLADMLGPQWSK E
Sbjct: 1 MGPTRKSRSVNKRFSNIREAAASKDKDAANTGRNRQKACPGIQKKRKLADMLGPQWSKAE 60
Query: 61 LERFYEAYRKYGK 73
LERFYEAYR+YGK
Sbjct: 61 LERFYEAYREYGK 73
>Medtr4g119390.2 | always EARLY-like protein | HC |
chr4:49426944-49447981 | 20130731
Length = 1198
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 53/73 (72%)
Query: 1 MAPXXXXXXXXXXXXNIHEAASSRDKDAANVVKTRQKASAGVQKKRKLADMLGPQWSKEE 60
M P NI EAA+S+DKDAAN + RQKA G+QKKRKLADMLGPQWSK E
Sbjct: 1 MGPTRKSRSVNKRFSNIREAAASKDKDAANTGRNRQKACPGIQKKRKLADMLGPQWSKAE 60
Query: 61 LERFYEAYRKYGK 73
LERFYEAYR+YGK
Sbjct: 61 LERFYEAYREYGK 73
>Medtr1g083040.6 | always EARLY-like protein | HC |
chr1:36931175-36944066 | 20130731
Length = 1111
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
+S Q+K+KL+D LG QWSK ELERFYEAYRK+GK
Sbjct: 29 SSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGK 64
>Medtr1g083040.1 | always EARLY-like protein | HC |
chr1:36931175-36944066 | 20130731
Length = 1111
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
+S Q+K+KL+D LG QWSK ELERFYEAYRK+GK
Sbjct: 29 SSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGK 64
>Medtr1g083040.5 | always EARLY-like protein | HC |
chr1:36931175-36944066 | 20130731
Length = 1135
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
+S Q+K+KL+D LG QWSK ELERFYEAYRK+GK
Sbjct: 29 SSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGK 64
>Medtr1g083040.3 | always EARLY-like protein | HC |
chr1:36931175-36944066 | 20130731
Length = 1124
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
+S Q+K+KL+D LG QWSK ELERFYEAYRK+GK
Sbjct: 29 SSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGK 64
>Medtr1g083040.4 | always EARLY-like protein | HC |
chr1:36931175-36944066 | 20130731
Length = 1122
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
+S Q+K+KL+D LG QWSK ELERFYEAYRK+GK
Sbjct: 29 SSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGK 64
>Medtr1g083040.2 | always EARLY-like protein | HC |
chr1:36931175-36944066 | 20130731
Length = 1122
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
+S Q+K+KL+D LG QWSK ELERFYEAYRK+GK
Sbjct: 29 SSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGK 64
>Medtr1g083040.7 | always EARLY-like protein | HC |
chr1:36931175-36941018 | 20130731
Length = 826
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
+S Q+K+KL+D LG QWSK ELERFYEAYRK+GK
Sbjct: 29 SSKNKQRKKKLSDKLGSQWSKGELERFYEAYRKHGK 64
>Medtr1g492660.1 | hypothetical protein | HC |
chr1:41523492-41526563 | 20130731
Length = 245
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 38 ASAGVQKKRKLADMLGPQWSKEELERFYEAYRKYGK 73
AS +KK+ L+D LGPQWS ELE FYE Y ++G+
Sbjct: 103 ASFAEKKKKNLSDKLGPQWSNRELENFYEVYGEHGR 138