Miyakogusa Predicted Gene

Lj0g3v0237849.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0237849.1 Non Characterized Hit- tr|I1N7F4|I1N7F4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55851 PE,93.97,0,no
description,Cytochrome c domain; no description,Cytochrome c1,
transmembrane anchor, C-terminal; ,CUFF.15723.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g023290.1 | cytochrome c1, heme protein | HC | chr6:810997...   366   e-102
Medtr6g023230.1 | cytochrome c1, heme protein | HC | chr6:808037...   365   e-101
Medtr6g023280.1 | cytochrome c1, heme protein | HC | chr6:809993...    99   2e-21

>Medtr6g023290.1 | cytochrome c1, heme protein | HC |
           chr6:8109977-8104364 | 20130731
          Length = 307

 Score =  366 bits (940), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 175/199 (87%), Positives = 182/199 (91%)

Query: 1   MSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFSRPGKLSDRFPEPYANESAAR 60
           MSLISYRDLVGVAYTE EVKAMA EIEVVDGPNDEGEMF+RPGKLSDRFP+PY+NESAAR
Sbjct: 109 MSLISYRDLVGVAYTEAEVKAMATEIEVVDGPNDEGEMFTRPGKLSDRFPQPYSNESAAR 168

Query: 61  FANGGAYPPDLSLITKARHNGQNYVFSLLTGYREPPAGIVIREGLHYNPYFPGGAIAMPK 120
           FANGGAYPPDLSLITKARHNGQNYVF+LLTGYR+PPAG+VIREGLHYNPYFPGGAIAMPK
Sbjct: 169 FANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVVIREGLHYNPYFPGGAIAMPK 228

Query: 121 MLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVXXXXXXXXXXX 180
           MLNDGAVEYEDGTPATE+QMGKDVVSFLSWAAEPEMEERKLMGFKWIFV           
Sbjct: 229 MLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYY 288

Query: 181 XXXXWSVLKSRKLVLDVVN 199
               WSVLKSRKLVLDVVN
Sbjct: 289 RRLRWSVLKSRKLVLDVVN 307


>Medtr6g023230.1 | cytochrome c1, heme protein | HC |
           chr6:8080377-8075843 | 20130731
          Length = 306

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/199 (88%), Positives = 182/199 (91%)

Query: 1   MSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFSRPGKLSDRFPEPYANESAAR 60
           MSLISYRDLVGVAYTEEEVKAMAAEIEV DGPNDEGEMF+RPGKLSDRFP+PYANESAAR
Sbjct: 108 MSLISYRDLVGVAYTEEEVKAMAAEIEVEDGPNDEGEMFTRPGKLSDRFPQPYANESAAR 167

Query: 61  FANGGAYPPDLSLITKARHNGQNYVFSLLTGYREPPAGIVIREGLHYNPYFPGGAIAMPK 120
           FANGGAYPPDLSLITKARHNGQNYVF+LLTGYR+PPAG+ IREGLHYNPYFPGGAIAMPK
Sbjct: 168 FANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPK 227

Query: 121 MLNDGAVEYEDGTPATESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVXXXXXXXXXXX 180
           MLNDGAVEYEDGTPATE+QMGKDVVSFLSWAAEPEMEERKLMGFKWIFV           
Sbjct: 228 MLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYY 287

Query: 181 XXXXWSVLKSRKLVLDVVN 199
               WSVLKSRKLVLDVVN
Sbjct: 288 RRLRWSVLKSRKLVLDVVN 306


>Medtr6g023280.1 | cytochrome c1, heme protein | HC |
          chr6:8099938-8099738 | 20130731
          Length = 66

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 46/64 (71%), Positives = 53/64 (82%)

Query: 24 AEIEVVDGPNDEGEMFSRPGKLSDRFPEPYANESAARFANGGAYPPDLSLITKARHNGQN 83
          +EI VVDGPN+EG+MF+ PGKL+DRFP+PY NESAARFANGGA+PPDLSLIT   HN   
Sbjct: 2  SEIVVVDGPNNEGKMFTLPGKLNDRFPQPYVNESAARFANGGAFPPDLSLITNMIHNFLC 61

Query: 84 YVFS 87
            FS
Sbjct: 62 MSFS 65