Miyakogusa Predicted Gene

Lj0g3v0237359.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0237359.2 Non Characterized Hit- tr|I3SL73|I3SL73_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,61.97,0.0000000000002,Cullin repeat-like,Cullin
repeat-like-containing domain; Cullin,Cullin, N-terminal;
CULLIN-RELATED,N,CUFF.15556.2
         (79 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g119450.1 | cullin-like protein | LC | chr4:49522675-49520...    73   6e-14
Medtr4g119422.1 | cullin-like protein | LC | chr4:49486759-49483...    72   1e-13
Medtr4g119930.2 | cullin-like protein | LC | chr4:49703321-49700...    70   4e-13
Medtr4g119930.1 | cullin-like protein | LC | chr4:49704236-49700...    70   5e-13
Medtr4g119930.3 | cullin-like protein | LC | chr4:49704220-49700...    70   6e-13
Medtr4g131905.1 | cullin-like protein, putative | LC | chr4:5506...    67   3e-12
Medtr2g437390.1 | cullin 3B | HC | chr2:14686877-14672632 | 2013...    65   1e-11
Medtr4g119413.1 | cullin 3B | HC | chr4:49479364-49470936 | 2013...    63   7e-11
Medtr4g119413.2 | cullin 3B | HC | chr4:49478916-49471101 | 2013...    63   7e-11
Medtr4g119490.1 | cullin-like protein | LC | chr4:49533061-49529...    60   4e-10
Medtr3g115680.1 | cullin-like protein | LC | chr3:54150041-54151...    55   1e-08
Medtr4g121555.1 | cullin-like protein | LC | chr4:50240315-50240...    54   3e-08
Medtr7g108340.1 | cullin 3B | HC | chr7:44103461-44096379 | 2013...    49   1e-06

>Medtr4g119450.1 | cullin-like protein | LC | chr4:49522675-49520043
           | 20130731
          Length = 211

 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/71 (54%), Positives = 50/71 (70%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ KKD  LL EL++ WSN K MT+ LS  F YL+RY+I  + L S EET+FL FY
Sbjct: 77  VLPSLRGKKDELLLRELVQRWSNQKTMTRCLSRCFHYLDRYFIKRRGLNSLEETAFLSFY 136

Query: 62  DLVGDEILRKV 72
           +LV  E+  +V
Sbjct: 137 NLVYVEMHHQV 147


>Medtr4g119422.1 | cullin-like protein | LC | chr4:49486759-49483972
           | 20130731
          Length = 368

 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNK-NLTSTEETSFLIF 60
           VLPSL+  KD  LL ELL  WSN+K+MTK LS  FCYL+R++IP K  L S EET FL F
Sbjct: 72  VLPSLRENKDELLLRELLIRWSNHKIMTKLLSRIFCYLDRFHIPRKWGLPSLEETGFLSF 131

Query: 61  YDLVGDEILRKV 72
           Y LV DE+ ++V
Sbjct: 132 YHLVYDEVKKQV 143


>Medtr4g119930.2 | cullin-like protein | LC | chr4:49703321-49700820
           | 20130731
          Length = 158

 Score = 70.1 bits (170), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 52/71 (73%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ KKD  LL ELL  WSN+K+MTK LS  F YL++Y+I  + L+S EET FL FY
Sbjct: 30  VLPSLREKKDELLLRELLERWSNHKIMTKLLSRIFRYLHKYHIRKRGLSSLEETGFLSFY 89

Query: 62  DLVGDEILRKV 72
            LV DE+ R+V
Sbjct: 90  YLVYDEMHRQV 100


>Medtr4g119930.1 | cullin-like protein | LC | chr4:49704236-49700820
           | 20130731
          Length = 206

 Score = 69.7 bits (169), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 52/71 (73%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ KKD  LL ELL  WSN+K+MTK LS  F YL++Y+I  + L+S EET FL FY
Sbjct: 78  VLPSLREKKDELLLRELLERWSNHKIMTKLLSRIFRYLHKYHIRKRGLSSLEETGFLSFY 137

Query: 62  DLVGDEILRKV 72
            LV DE+ R+V
Sbjct: 138 YLVYDEMHRQV 148


>Medtr4g119930.3 | cullin-like protein | LC | chr4:49704220-49700820
           | 20130731
          Length = 178

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/71 (59%), Positives = 52/71 (73%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ KKD  LL ELL  WSN+K+MTK LS  F YL++Y+I  + L+S EET FL FY
Sbjct: 78  VLPSLREKKDELLLRELLERWSNHKIMTKLLSRIFRYLHKYHIRKRGLSSLEETGFLSFY 137

Query: 62  DLVGDEILRKV 72
            LV DE+ R+V
Sbjct: 138 YLVYDEMHRQV 148


>Medtr4g131905.1 | cullin-like protein, putative | LC |
           chr4:55066081-55066849 | 20130731
          Length = 146

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 42/66 (63%)

Query: 3   LPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFYD 62
           LPSLQ K+D  LL EL R WSNYK+ TK LS  F  ++R+        S EET FL FY 
Sbjct: 80  LPSLQEKQDEPLLRELFRRWSNYKITTKRLSSFFSPIDRHIELKFGFPSLEETRFLCFYH 139

Query: 63  LVGDEI 68
           LVGDEI
Sbjct: 140 LVGDEI 145


>Medtr2g437390.1 | cullin 3B | HC | chr2:14686877-14672632 |
           20130731
          Length = 742

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 45/71 (63%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ K D  +L EL+R W+N+K+M +WLS  F YL+RY+I  ++L    E     F 
Sbjct: 79  VLPSLREKHDEFMLRELVRRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFR 138

Query: 62  DLVGDEILRKV 72
           DLV  E+  KV
Sbjct: 139 DLVYKEVNGKV 149


>Medtr4g119413.1 | cullin 3B | HC | chr4:49479364-49470936 |
           20130731
          Length = 744

 Score = 62.8 bits (151), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 45/71 (63%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ K D  +L EL++ W+N+K+M +WLS  F YL+RY+I  ++L    E     F 
Sbjct: 81  VLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLACFR 140

Query: 62  DLVGDEILRKV 72
           DLV  E+  K+
Sbjct: 141 DLVYKELHGKM 151


>Medtr4g119413.2 | cullin 3B | HC | chr4:49478916-49471101 |
           20130731
          Length = 632

 Score = 62.8 bits (151), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 45/71 (63%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ K D  +L EL++ W+N+K+M +WLS  F YL+RY+I  ++L    E     F 
Sbjct: 81  VLPSLREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFIARRSLPPLNEVGLACFR 140

Query: 62  DLVGDEILRKV 72
           DLV  E+  K+
Sbjct: 141 DLVYKELHGKM 151


>Medtr4g119490.1 | cullin-like protein | LC | chr4:49533061-49529016
           | 20130731
          Length = 211

 Score = 60.1 bits (144), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 47/71 (66%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ KKD  LL ELL  WS +K MTK LS  F YL+RY+I  + L S EE   L FY
Sbjct: 77  VLPSLRGKKDELLLRELLGRWSIHKTMTKCLSKFFHYLDRYFIGRQRLPSLEEIGLLSFY 136

Query: 62  DLVGDEILRKV 72
           DLV  E+ R+V
Sbjct: 137 DLVYVEMHREV 147


>Medtr3g115680.1 | cullin-like protein | LC | chr3:54150041-54151148
           | 20130731
          Length = 190

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/63 (52%), Positives = 40/63 (63%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VLPSL+ K++  LL ELL+TWSNYK++T  LS  F  L  Y +      S EE  FL FY
Sbjct: 75  VLPSLRAKENEILLRELLKTWSNYKIITVCLSRLFRSLETYDMRKSMEHSLEEIGFLSFY 134

Query: 62  DLV 64
           DLV
Sbjct: 135 DLV 137


>Medtr4g121555.1 | cullin-like protein | LC |
          chr4:50240315-50240013 | 20130731
          Length = 100

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/71 (50%), Positives = 45/71 (63%)

Query: 2  VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
          VLPSL+ KKD  LL ELLR W N+K  T   S  F YL+RY++    L S +E  FL FY
Sbjct: 15 VLPSLRGKKDELLLRELLRRWPNHKERTCQRSKYFSYLDRYHVRRHQLPSQQEIGFLSFY 74

Query: 62 DLVGDEILRKV 72
           LV DE+ ++V
Sbjct: 75 YLVYDELNKQV 85


>Medtr7g108340.1 | cullin 3B | HC | chr7:44103461-44096379 |
           20130731
          Length = 735

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 38/63 (60%)

Query: 2   VLPSLQVKKDRQLLIELLRTWSNYKLMTKWLSLSFCYLNRYYIPNKNLTSTEETSFLIFY 61
           VL +++ K D  +L EL++ W N+K++ +WLS  F YL+RY++  ++L          F 
Sbjct: 78  VLSAVRDKHDEFMLRELVQRWLNHKVLVRWLSRFFHYLDRYFVARRSLPPLNAVGLSAFR 137

Query: 62  DLV 64
           DLV
Sbjct: 138 DLV 140