Miyakogusa Predicted Gene

Lj0g3v0237219.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0237219.2 Non Characterized Hit- tr|K3ZIU2|K3ZIU2_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026495,47.75,0.000000000000001, ,CUFF.15574.2
         (119 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g053780.1 | hypothetical protein | HC | chr1:22771072-2276...   191   1e-49
Medtr1g054100.2 | hypothetical protein | HC | chr1:23078580-2307...   191   2e-49
Medtr1g054100.1 | hypothetical protein | HC | chr1:23078580-2307...   191   2e-49
Medtr4g092970.1 | hypothetical protein | HC | chr4:36908137-3690...   189   4e-49
Medtr6g477880.1 | DHHA1 domain protein | HC | chr6:28647675-2865...    46   6e-06

>Medtr1g053780.1 | hypothetical protein | HC |
           chr1:22771072-22768092 | 20130731
          Length = 372

 Score =  191 bits (485), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 95/118 (80%), Positives = 102/118 (86%), Gaps = 3/118 (2%)

Query: 5   KWGMR-NLTHSL--CFRSGCRSLRSDAALEAIAKASEDKVPSIVLYNYPSFSGAFSALFA 61
           KWGM+ N+  S   C   G RSLRSDAALEAIAKASEDKVP++VLYNYPSFSGAFS+LFA
Sbjct: 8   KWGMKKNIQFSFPPCVEIGYRSLRSDAALEAIAKASEDKVPNVVLYNYPSFSGAFSSLFA 67

Query: 62  HLFHTRHNLPCLILPFSSVPFLALRVEDLCIEGLETCYLLDFLPPKEFLFKLSHQSKC 119
           HLFHTRHNLP L LPFSSVP LA RVEDLCIE L+TCYLLDFLPPKEF+FKLSHQS C
Sbjct: 68  HLFHTRHNLPSLSLPFSSVPSLAFRVEDLCIESLQTCYLLDFLPPKEFIFKLSHQSNC 125


>Medtr1g054100.2 | hypothetical protein | HC |
           chr1:23078580-23073265 | 20130731
          Length = 335

 Score =  191 bits (484), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/118 (80%), Positives = 102/118 (86%), Gaps = 3/118 (2%)

Query: 5   KWGMR-NLTHSL--CFRSGCRSLRSDAALEAIAKASEDKVPSIVLYNYPSFSGAFSALFA 61
           KWGM+ N+  S   C   G RSLRSDAALEAIAKASEDKVP++VLYNYPSFSGAFS+LFA
Sbjct: 8   KWGMKKNIQFSFPPCVEIGYRSLRSDAALEAIAKASEDKVPNVVLYNYPSFSGAFSSLFA 67

Query: 62  HLFHTRHNLPCLILPFSSVPFLALRVEDLCIEGLETCYLLDFLPPKEFLFKLSHQSKC 119
           HLFHTRHNLP L LPFSSVP LA RVEDLCIE L+TCYLLDFLPPKEF+FKLSHQS C
Sbjct: 68  HLFHTRHNLPSLSLPFSSVPSLAFRVEDLCIESLQTCYLLDFLPPKEFIFKLSHQSNC 125


>Medtr1g054100.1 | hypothetical protein | HC |
           chr1:23078580-23073265 | 20130731
          Length = 335

 Score =  191 bits (484), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/118 (80%), Positives = 102/118 (86%), Gaps = 3/118 (2%)

Query: 5   KWGMR-NLTHSL--CFRSGCRSLRSDAALEAIAKASEDKVPSIVLYNYPSFSGAFSALFA 61
           KWGM+ N+  S   C   G RSLRSDAALEAIAKASEDKVP++VLYNYPSFSGAFS+LFA
Sbjct: 8   KWGMKKNIQFSFPPCVEIGYRSLRSDAALEAIAKASEDKVPNVVLYNYPSFSGAFSSLFA 67

Query: 62  HLFHTRHNLPCLILPFSSVPFLALRVEDLCIEGLETCYLLDFLPPKEFLFKLSHQSKC 119
           HLFHTRHNLP L LPFSSVP LA RVEDLCIE L+TCYLLDFLPPKEF+FKLSHQS C
Sbjct: 68  HLFHTRHNLPSLSLPFSSVPSLAFRVEDLCIESLQTCYLLDFLPPKEFIFKLSHQSNC 125


>Medtr4g092970.1 | hypothetical protein | HC |
           chr4:36908137-36904480 | 20130731
          Length = 372

 Score =  189 bits (481), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 95/118 (80%), Positives = 101/118 (85%), Gaps = 3/118 (2%)

Query: 5   KWGMR-NLTHSL--CFRSGCRSLRSDAALEAIAKASEDKVPSIVLYNYPSFSGAFSALFA 61
           KWGM+ N+  S   C   G RSLRSDAALEAIAKASEDKVP+IVLYNYPSFSGAFS+LFA
Sbjct: 8   KWGMKKNIQFSFPPCVEIGYRSLRSDAALEAIAKASEDKVPNIVLYNYPSFSGAFSSLFA 67

Query: 62  HLFHTRHNLPCLILPFSSVPFLALRVEDLCIEGLETCYLLDFLPPKEFLFKLSHQSKC 119
           HLFHTRHNLP L LPFSSVP LA RVEDLCIE L+TCYLLDFLPP EF+FKLSHQS C
Sbjct: 68  HLFHTRHNLPSLSLPFSSVPSLAFRVEDLCIESLQTCYLLDFLPPNEFIFKLSHQSNC 125


>Medtr6g477880.1 | DHHA1 domain protein | HC |
           chr6:28647675-28659241 | 20130731
          Length = 354

 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 40  KVPSIVLYNYPSFSGAFSALFAHLFHTRHNLPCLILPFSSVPFLALRVEDLCIEGLETCY 99
           K  + +LY+YP   G F+AL AHL+    +L   +  F +  +  LR EDL +  ++  Y
Sbjct: 29  KGSAAILYHYPCPDGVFAALAAHLYFKATSLLSPLF-FPNTVYSPLRAEDLPLNEIDDLY 87

Query: 100 LLDFLPPKEFLFKLS 114
           LLDF+ P  F+ ++S
Sbjct: 88  LLDFVGPPGFVQEIS 102